Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,475,807 |
T→C |
T110A (ACT→GCT) |
slyD ← |
FKBP‑type peptidyl‑prolyl cis‑trans isomerase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,475,807 | 0 | T | C | 98.2%
| 519.9
/ ‑1.5
| 168 | T110A (ACT→GCT) | slyD | FKBP‑type peptidyl‑prolyl cis‑trans isomerase |
| Reads supporting (aligned to +/- strand): ref base T (1/2); new base C (89/76); total (90/78) |
| Fisher's exact test for biased strand distribution p-value = 5.98e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.69e-01 |
Only 100 of 176 total aligned reads displayed.
GAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGTGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAG > NC_000913/3475717‑3475896
|
gAATCGCCTCAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGa > 1:2938417/1‑93 (MQ=255)
aaTCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGAt < 2:3761122/93‑1 (MQ=255)
aTCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGAtt < 1:2110396/93‑1 (MQ=255)
cGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTc < 2:702273/93‑1 (MQ=255)
ccACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCaa < 2:141624/93‑1 (MQ=255)
cacaACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAAc > 1:2662717/1‑93 (MQ=255)
cacaACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAAc > 1:2571427/1‑93 (MQ=255)
ccaACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAAcc < 1:1168671/92‑1 (MQ=255)
acaACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGTGATTTCAAcc > 2:3922675/1‑93 (MQ=255)
acaACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAAcc < 1:796526/93‑1 (MQ=255)
caACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCg > 2:1172668/1‑93 (MQ=255)
caACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCg < 1:2995024/93‑1 (MQ=255)
aCTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGt > 1:1012118/1‑93 (MQ=255)
aCTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGt < 2:430927/93‑1 (MQ=255)
aCTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGt < 1:4562633/93‑1 (MQ=255)
cTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTa < 2:3518937/93‑1 (MQ=255)
ttCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTAc > 1:2218836/1‑93 (MQ=255)
ttCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTAc < 1:3289940/93‑1 (MQ=255)
ttCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTAc > 1:277820/1‑93 (MQ=255)
ttCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTATTCAACCGCAGCGATTTCAACCGGTAc < 1:2078661/93‑1 (MQ=255)
taaCGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCg < 1:595889/92‑1 (MQ=255)
aCGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGa > 2:3673540/1‑93 (MQ=255)
ttGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGAccc > 2:4601156/1‑93 (MQ=255)
ttGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGAccc > 1:2386174/1‑93 (MQ=255)
tGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCt < 1:1835526/93‑1 (MQ=255)
gAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACGGGACCCTg > 2:386557/1‑93 (MQ=255)
aTTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGt < 2:3118318/93‑1 (MQ=255)
aTTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGt < 1:3535025/93‑1 (MQ=255)
tttCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGtg > 2:4506056/1‑92 (MQ=255)
tttCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTc < 1:3243206/93‑1 (MQ=255)
tttCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTc > 1:3083117/1‑93 (MQ=255)
tttCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTc < 1:1036255/93‑1 (MQ=255)
tttCAGCTTCTGACCGGCCAGCATGTGGTTACCCTCAACCACGACGCGATCGTCCTCAACCGCAGCGCTTTCACCCCGCACCGTACCCTCGTc > 1:989639/1‑93 (MQ=255)
cttCTGGTTCTGATCGGTCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCTGCGATTTCATCCTGTATCGGACTCTGGTc > 2:4209516/2‑93 (MQ=255)
cAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGt > 2:4286966/1‑93 (MQ=255)
aGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGtt > 2:2840619/1‑93 (MQ=255)
ggTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGttt < 2:865560/93‑1 (MQ=255)
ggTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGttt > 2:4171715/1‑93 (MQ=255)
ggTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGttt > 2:1010716/1‑93 (MQ=255)
gTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTc < 2:2382729/93‑1 (MQ=255)
gTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTc < 2:2348671/93‑1 (MQ=255)
gtCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCa < 2:1240523/92‑1 (MQ=255)
tCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAg > 2:4454295/1‑93 (MQ=255)
gACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCa < 2:475676/93‑1 (MQ=255)
gACCGGCCAGCATGTGGTTACCACCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCa < 2:1703178/93‑1 (MQ=255)
ccGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAgg > 2:974913/1‑93 (MQ=255)
cgtccAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGa < 1:1887682/90‑1 (MQ=255)
ggCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGaa < 2:3663668/93‑1 (MQ=255)
ggCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGaa < 1:3852252/93‑1 (MQ=255)
gCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGaaa < 2:600059/93‑1 (MQ=255)
cAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACg > 2:2947779/1‑93 (MQ=255)
gCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCa < 1:644831/93‑1 (MQ=255)
gCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCa > 1:2855101/1‑93 (MQ=255)
gCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCa > 1:1553240/1‑93 (MQ=255)
cATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCAt < 2:3181227/93‑1 (MQ=255)
gTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGCCCCTGGTCGGTCTCAGACAGGAAACGCAtacctac > 1:4314431/1‑93 (MQ=255)
gTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCAtacctac > 1:3776314/1‑93 (MQ=255)
ttACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCAtacctacc < 1:1500103/93‑1 (MQ=255)
ttACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCAtacctacc < 1:1107555/93‑1 (MQ=255)
ttACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCAtacctacc > 2:2536205/1‑93 (MQ=255)
ttACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCAtacctacc > 1:117628/1‑93 (MQ=255)
ttACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCAtacctacc < 1:2776799/93‑1 (MQ=255)
tACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATacctacct < 2:3795150/93‑1 (MQ=255)
ccATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGc < 2:1076842/93‑1 (MQ=255)
cATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCa > 1:2249742/1‑93 (MQ=255)
aTCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAg > 1:1742135/1‑93 (MQ=255)
aTCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACACTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCat > 2:1523694/1‑92 (MQ=255)
tCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGt > 2:2001432/1‑93 (MQ=255)
cAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCGACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGtt < 1:1288874/93‑1 (MQ=255)
ccACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTtcat < 2:1389416/93‑1 (MQ=255)
cACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGTCAGGAAACGCATACCTACCTGCAGTtcatc > 2:3813929/1‑93 (MQ=255)
cACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTtcatc > 1:2264155/1‑93 (MQ=255)
ccgacgTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTtcatca < 2:2636192/92‑1 (MQ=255)
acgacgTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTtcatca > 1:1038948/1‑93 (MQ=255)
gtcgTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAAc < 2:3264701/91‑1 (MQ=255)
gacgTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAAc < 1:3760501/93‑1 (MQ=255)
cgTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGc < 1:1970006/93‑1 (MQ=255)
gTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGcc < 1:2050653/93‑1 (MQ=255)
tGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGccc > 2:1543141/1‑93 (MQ=255)
tGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGccc > 1:2400648/1‑93 (MQ=255)
gATCGTTTTCTACCGCAACGTTTTCAACCTATTCCGGAGCCTGGTCGGTTTCAACCAGAACACGCATATCTATCTGCAGTTCGTCAACACCCa > 2:4649250/1‑93 (MQ=255)
tCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATa > 1:1429483/1‑93 (MQ=255)
gTCTTCAACCGCAGTGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATaaa < 2:4363472/93‑1 (MQ=255)
tCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAAt > 1:967032/1‑93 (MQ=255)
cTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATa < 2:2834239/93‑1 (MQ=255)
cTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATa > 1:903643/1‑93 (MQ=255)
ttCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATAc > 2:4573247/1‑93 (MQ=255)
ttCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATAc > 1:4268241/1‑93 (MQ=255)
ttCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATAc < 1:343866/93‑1 (MQ=255)
cAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGt > 1:1333264/1‑93 (MQ=255)
aaCCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTc > 2:1840432/1‑93 (MQ=255)
aaCCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTc > 1:4376878/1‑93 (MQ=255)
aCCGCTGCGATTTCAACCGGTACTGGACCCGGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGCCt < 2:3385942/93‑1 (MQ=255)
aCCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCt < 1:4128867/93‑1 (MQ=255)
aCCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCt > 2:884583/1‑93 (MQ=255)
cGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCttt < 1:3281946/93‑1 (MQ=255)
gCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTa < 2:4441833/93‑1 (MQ=255)
gCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTa < 2:700457/93‑1 (MQ=255)
cAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAg < 2:396130/93‑1 (MQ=255)
cAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAg < 1:293373/93‑1 (MQ=255)
|
GAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGTGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAG > NC_000913/3475717‑3475896
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGTGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAGGAAC > NC_000913/3475716‑3475900
|
CGAATCGCCTCAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGA > SRR4302544.2966634/1‑94 (MQ=60)
CGAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGA < SRR4302544.426563/94‑1 (MQ=60)
CGAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGA > SRR4302544.2966633/1‑94 (MQ=60)
GAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGAT > SRR4302544.1982129/1‑94 (MQ=60)
GAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGAT > SRR4302544.2786055/1‑94 (MQ=60)
AATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATT > SRR4302544.1234556/1‑94 (MQ=60)
AATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATT > SRR4302544.203105/1‑94 (MQ=60)
ATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTT < SRR4302544.2130688/94‑1 (MQ=60)
TCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTC > SRR4302544.1055891/1‑94 (MQ=60)
CGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCTGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCA < SRR4302544.3302809/94‑1 (MQ=60)
GCCACAACTTCAACGTTGAATCTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAA < SRR4302544.881466/94‑1 (MQ=60)
CCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAAC > SRR4302544.2596136/1‑94 (MQ=60)
CCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAAC > SRR4302544.2688245/1‑94 (MQ=60)
CACAACTTCAACGTTGAATTTCAGGTTCTGACAGGTCAGCATGTGGTTACCATCAAACACGACGTGATCGTCTTCAACCGCAGCGATTTCAACC > SRR4302544.2041526/1‑94 (MQ=60)
CCAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCG < SRR4302544.1180325/94‑1 (MQ=60)
ACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCG < SRR4302544.804250/94‑1 (MQ=60)
CAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGG < SRR4302544.3023741/94‑1 (MQ=60)
AACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGT > SRR4302544.1022204/1‑94 (MQ=60)
ACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTA < SRR4302544.4608126/94‑1 (MQ=60)
CTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTAC > SRR4302544.2239706/1‑94 (MQ=60)
CTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTAC > SRR4302544.354282/1‑94 (MQ=60)
CTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTAC > SRR4302544.4276231/1‑94 (MQ=60)
CTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTAC > SRR4302544.280721/1‑94 (MQ=60)
TTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACC < SRR4302544.3321289/94‑1 (MQ=60)
TTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTATTCAACCGCAGCGATTTCAACCGGTACC < SRR4302544.2098641/94‑1 (MQ=60)
TCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCG < SRR4302544.2922783/94‑1 (MQ=60)
TCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGCCTTCACCCGCAGAGATTTCAATCGGTACCG > SRR4302544.386284/1‑94 (MQ=60)
TAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGG < SRR4302544.601735/94‑1 (MQ=60)
CAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGG < SRR4302544.3247207/94‑1 (MQ=60)
GTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCC > SRR4302544.2408775/1‑94 (MQ=60)
TGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTG < SRR4302544.1853353/94‑1 (MQ=60)
GAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGG > SRR4302544.2458694/1‑94 (MQ=60)
ATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTC > SRR4302544.3112487/1‑94 (MQ=60)
ATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTC < SRR4302544.3568838/94‑1 (MQ=60)
TTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCG < SRR4302544.1046558/94‑1 (MQ=60)
TTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCG < SRR4302544.3274253/94‑1 (MQ=60)
AGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTT > SRR4302544.2256807/1‑94 (MQ=60)
GGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTC > SRR4302544.945302/1‑94 (MQ=60)
GTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCA > SRR4302544.3921570/1‑94 (MQ=60)
TGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCA > SRR4302544.1779565/1‑94 (MQ=60)
CGTCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAA < SRR4302544.1905918/94‑1 (MQ=60)
CGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAA > SRR4302544.104668/1‑94 (MQ=60)
CGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAA > SRR4302544.803581/1‑94 (MQ=60)
GGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAA > SRR4302544.3590547/1‑94 (MQ=60)
GGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAA < SRR4302544.3890492/94‑1 (MQ=60)
AGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCA > SRR4302544.1568698/1‑94 (MQ=60)
AGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCA > SRR4302544.997568/1‑94 (MQ=60)
AGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCA > SRR4302544.2882677/1‑94 (MQ=60)
GCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCAT < SRR4302544.651200/94‑1 (MQ=60)
GTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCT < SRR4302544.2276916/94‑1 (MQ=60)
GTGGTTACCATCAACCACGACGTGATCGTCGTCAACCGCAGCGATTTCAAACGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCT < SRR4302544.2855462/94‑1 (MQ=60)
TGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTA > SRR4302544.4406678/1‑94 (MQ=60)
GGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGCCCCTGGTCGGTCTCAGACAGGAAACGCATACCTAC > SRR4302544.4358390/1‑94 (MQ=60)
GGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTAC > SRR4302544.3813737/1‑94 (MQ=60)
GTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACC > SRR4302544.118696/1‑94 (MQ=60)
TTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCT < SRR4302544.2803508/94‑1 (MQ=60)
TTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCT < SRR4302544.1118598/94‑1 (MQ=60)
TTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCT < SRR4302544.1514940/94‑1 (MQ=60)
TACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTG > SRR4302544.2421060/1‑94 (MQ=60)
CCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCA > SRR4302544.2270884/1‑94 (MQ=60)
CATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAG > SRR4302544.1759195/1‑94 (MQ=60)
CAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCGACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTC < SRR4302544.1301566/94‑1 (MQ=60)
ACCACGACGTGATCGTCTTCAACCGCAGTGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCAT < SRR4302544.2228349/94‑1 (MQ=60)
CCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATC > SRR4302544.2285453/1‑94 (MQ=60)
CACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCA > SRR4302544.1049270/1‑94 (MQ=60)
CGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCCGGAAACGCATACCTACCTGCAGTTCATCAAC > SRR4302544.1149378/1‑94 (MQ=60)
GACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACG > SRR4302544.1587565/1‑94 (MQ=60)
GACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACG < SRR4302544.3797827/94‑1 (MQ=60)
CGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCC < SRR4302544.1989139/94‑1 (MQ=60)
CGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCC < SRR4302544.133947/94‑1 (MQ=60)
CGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCC > SRR4302544.4582515/1‑94 (MQ=60)
GTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCC < SRR4302544.2070402/94‑1 (MQ=60)
GTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCC > SRR4302544.2423426/1‑94 (MQ=60)
TGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCA > SRR4302544.2074456/1‑94 (MQ=60)
GATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCAT < SRR4302544.1419952/94‑1 (MQ=60)
ATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATA > SRR4302544.1443702/1‑94 (MQ=60)
ATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATA < SRR4302544.553802/94‑1 (MQ=60)
GTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAAT > SRR4302544.976515/1‑94 (MQ=60)
TCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATA > SRR4302544.912589/1‑94 (MQ=60)
CTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATAC > SRR4302544.4311803/1‑94 (MQ=60)
TTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACG < SRR4302544.347412/94‑1 (MQ=60)
TCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGT > SRR4302544.1346393/1‑94 (MQ=60)
CAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTC > SRR4302544.4421237/1‑94 (MQ=60)
ACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTT > SRR4302544.338741/1‑94 (MQ=60)
ACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTT < SRR4302544.4169804/94‑1 (MQ=60)
CCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTT < SRR4302544.3040251/94‑1 (MQ=60)
CGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTA < SRR4302544.1564203/94‑1 (MQ=60)
CGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTA < SRR4302544.3313217/94‑1 (MQ=60)
GCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAG < SRR4302544.2656745/94‑1 (MQ=60)
CAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAGG < SRR4302544.296411/94‑1 (MQ=60)
CGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAGGAAC < SRR4302544.997771/94‑1 (MQ=60)
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CGAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGTGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAGGAAC > NC_000913/3475716‑3475900
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
