Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,475,807 |
T→C |
T110A (ACT→GCT) |
slyD ← |
FKBP‑type peptidyl‑prolyl cis‑trans isomerase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,475,807 | 0 | T | C | 100.0%
| 972.2
/ NA
| 299 | T110A (ACT→GCT) | slyD | FKBP‑type peptidyl‑prolyl cis‑trans isomerase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (142/157); total (142/157) |
Only 100 of 312 total aligned reads displayed.
GAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGTGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAG > NC_000913/3475717‑3475896
|
gAATCGCCACAACTTCAACGTTAAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACAGCAGCGa < 1:6606441/93‑1 (MQ=255)
caaTCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGa < 1:3667078/92‑1 (MQ=255)
aTCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGAtt > 1:5329069/1‑93 (MQ=255)
aTCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGAtt < 2:2787956/93‑1 (MQ=255)
aTCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGAtt > 1:3766013/1‑93 (MQ=255)
aTCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGAtt < 2:5763477/93‑1 (MQ=255)
cGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTc > 1:6375963/1‑93 (MQ=255)
ccACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCaa > 1:4796757/1‑93 (MQ=255)
cacaACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAAc > 1:4439225/1‑93 (MQ=255)
cacaACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAAc < 2:5842163/93‑1 (MQ=255)
acaACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAAcc > 2:750622/1‑93 (MQ=255)
acaACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAAcc < 1:3328123/93‑1 (MQ=255)
acaACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAAcc > 2:6054014/1‑93 (MQ=255)
acaACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGGGATCGTCTTCAACCGCAGCGATTTCAAcg > 2:4053174/1‑92 (MQ=255)
aaCTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCgg > 2:3158175/1‑93 (MQ=255)
aaCTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCgg < 1:2502219/93‑1 (MQ=255)
aCTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGt > 1:2246778/1‑93 (MQ=255)
aCTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGt > 2:3268191/1‑93 (MQ=255)
aCTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGt > 1:6075167/1‑93 (MQ=255)
ttCAACGTTTAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCAGGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTAc < 1:5414280/93‑1 (MQ=255)
aaCGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCgg > 2:4605408/1‑93 (MQ=255)
aaCGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCgg < 1:5982449/93‑1 (MQ=255)
aaCGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCgg > 1:671090/1‑93 (MQ=255)
aCGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGa < 2:2615455/93‑1 (MQ=255)
aCGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGa > 2:6169552/1‑93 (MQ=255)
gTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGAcc > 2:2217947/1‑93 (MQ=255)
gTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGAcc > 1:242739/1‑93 (MQ=255)
gTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGAcc < 1:2115601/93‑1 (MQ=255)
gTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGAcc > 1:196684/1‑93 (MQ=255)
cttGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGAcc < 2:1533389/92‑1 (MQ=255)
gtGAATTTCAGGTTCTGACCGGGCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGAccc < 2:245265/92‑1 (MQ=255)
gAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTg < 2:2293020/93‑1 (MQ=255)
aaTTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTgg < 1:2762612/93‑1 (MQ=255)
aaTTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTgg < 1:4588965/93‑1 (MQ=255)
aTTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGt < 2:3500881/93‑1 (MQ=255)
aTTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGt < 2:2993935/93‑1 (MQ=255)
tttCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTc > 2:6429740/1‑93 (MQ=255)
tttCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTc > 1:1413094/1‑93 (MQ=255)
tttCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCCGTACCGGACCCTGGtg > 2:2656689/1‑92 (MQ=255)
tCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCgg < 2:1920136/93‑1 (MQ=255)
cAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGt < 2:3244794/93‑1 (MQ=255)
aGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGtt < 1:4931733/93‑1 (MQ=255)
ggTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGttt > 2:4781177/1‑93 (MQ=255)
ttCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCa > 2:885903/1‑93 (MQ=255)
gACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCa > 2:1177596/1‑93 (MQ=255)
ccGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAgg < 2:132613/93‑1 (MQ=255)
gCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGaaa > 2:3671003/1‑93 (MQ=255)
ccAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAAc > 1:1905086/1‑93 (MQ=255)
cAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACg > 2:5661923/1‑93 (MQ=255)
cAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACg > 1:1848275/1‑93 (MQ=255)
cAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACg < 2:2371117/93‑1 (MQ=255)
aGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCATCCAGGAAACGc > 2:4366472/1‑93 (MQ=255)
aGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGc > 2:4653429/1‑93 (MQ=255)
aGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGCTTCACCCACGCAACGc > 1:2862250/1‑93 (MQ=255)
gCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCa > 1:3505578/1‑93 (MQ=255)
gCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCa < 2:5389904/93‑1 (MQ=255)
aTGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCAta < 2:1616741/93‑1 (MQ=255)
aTGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCAta < 1:6267508/93‑1 (MQ=255)
aTGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCAta > 1:733775/1‑93 (MQ=255)
tgtgGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCAtac < 1:5017512/93‑1 (MQ=255)
gtgGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCAtacc < 2:1421990/93‑1 (MQ=255)
ggTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCAtaccta < 1:4524188/93‑1 (MQ=255)
ttACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCAtacctacc < 2:2883552/93‑1 (MQ=255)
tACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATacctacct < 1:159863/93‑1 (MQ=255)
aCCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTg > 2:6715952/1‑93 (MQ=255)
aCCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTg > 1:4043209/1‑93 (MQ=255)
aTCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAg < 1:851833/93‑1 (MQ=255)
tCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGt > 1:3835753/1‑93 (MQ=255)
aCCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTtca < 2:4894925/93‑1 (MQ=255)
aCCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTtca < 2:2515940/93‑1 (MQ=255)
ccACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTtcat < 1:5718309/93‑1 (MQ=255)
ccACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTtcat > 2:6593198/1‑93 (MQ=255)
acgacgTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTtcatca > 2:3956654/1‑93 (MQ=255)
cgacgTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCaa > 1:6175554/1‑93 (MQ=255)
acgTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACg > 2:5284227/1‑93 (MQ=255)
acgTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACg > 1:4274366/1‑93 (MQ=255)
acgTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACg > 1:4656216/1‑93 (MQ=255)
gTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGcc > 2:1573564/1‑93 (MQ=255)
tGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGccc < 1:2297005/93‑1 (MQ=255)
gATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCa < 1:5929160/93‑1 (MQ=255)
tCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATa > 2:2943907/1‑93 (MQ=255)
tCGTCTTCAACCGCAGCGACTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATa > 2:414596/1‑93 (MQ=255)
cGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATaa > 1:5152529/1‑93 (MQ=255)
gTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATaaa > 1:5905984/1‑93 (MQ=255)
tCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGGCGGGTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAAt > 1:1221712/1‑93 (MQ=255)
ttCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATAc < 2:2745687/93‑1 (MQ=255)
ttCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATAc < 1:1789598/93‑1 (MQ=255)
ttCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATAc > 1:1022112/1‑93 (MQ=255)
ttCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATAc < 1:947373/93‑1 (MQ=255)
tCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACg < 2:4250408/93‑1 (MQ=255)
cAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGt < 1:522408/93‑1 (MQ=255)
cAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGt > 2:6136910/1‑93 (MQ=255)
aaCCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTc < 2:4447352/93‑1 (MQ=255)
aaCCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTc < 2:1786682/93‑1 (MQ=255)
aaCCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTc > 2:784856/1‑93 (MQ=255)
aCCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCt > 1:5116208/1‑93 (MQ=255)
aCCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCt < 2:1006375/93‑1 (MQ=255)
ccGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCtt > 1:559016/1‑93 (MQ=255)
cAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAg > 2:5200893/1‑93 (MQ=255)
cAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAg > 2:5562960/1‑93 (MQ=255)
|
GAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGTGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAG > NC_000913/3475717‑3475896
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCGAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGTGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAGGA > NC_000913/3475715‑3475898
|
GCGAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCG > SRR4302536.5924485/1‑94 (MQ=60)
GCGAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCG > SRR4302536.1659672/1‑94 (MQ=60)
GCGAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCG < SRR4302536.2208159/94‑1 (MQ=60)
GCGAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCG > SRR4302536.3171989/1‑94 (MQ=60)
GCAAATCGCCACACCTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCG < SRR4302536.4323259/94‑1 (MQ=60)
GAATCGCCACAACTTCAACGTTAAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACAGCAGCGAT < SRR4302536.6802897/94‑1 (MQ=60)
CAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGAT < SRR4302536.3776712/94‑1 (MQ=60)
AATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATT > SRR4302536.3878467/1‑94 (MQ=60)
AATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATT > SRR4302536.5488294/1‑94 (MQ=60)
ATCTCCACAACTTCAACGTTGAATTTCAGGTTCGGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTT < SRR4302536.1445474/94‑1 (MQ=60)
TCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTC > SRR4302536.6565992/1‑94 (MQ=60)
GCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAA > SRR4302536.903703/1‑94 (MQ=60)
GCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAA > SRR4302536.4941132/1‑94 (MQ=60)
CCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAAC < SRR4302536.5769841/94‑1 (MQ=60)
CCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAAC > SRR4302536.4572471/1‑94 (MQ=60)
CACAACTTCAACGTTGACTTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACC > SRR4302536.1944066/1‑94 (MQ=60)
CACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACC < SRR4302536.6148093/94‑1 (MQ=60)
ACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCG < SRR4302536.3426605/94‑1 (MQ=60)
AACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGT > SRR4302536.6256390/1‑94 (MQ=60)
AACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGT > SRR4302536.2314787/1‑94 (MQ=60)
AACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGT < SRR4302536.2577663/94‑1 (MQ=60)
ACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTA > SRR4302536.1002864/1‑94 (MQ=60)
CTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTAC > SRR4302536.6033162/1‑94 (MQ=60)
TTCAACGTTTAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCAGGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACC < SRR4302536.5576086/94‑1 (MQ=60)
TTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACC > SRR4302536.1006900/1‑94 (MQ=60)
TTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACC < SRR4302536.737981/94‑1 (MQ=60)
TCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCG < SRR4302536.6088027/94‑1 (MQ=60)
CAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGG > SRR4302536.690756/1‑94 (MQ=60)
AACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGA < SRR4302536.6160830/94‑1 (MQ=60)
CGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACC > SRR4302536.201855/1‑94 (MQ=60)
CGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACC > SRR4302536.249203/1‑94 (MQ=60)
GTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCC < SRR4302536.2179173/94‑1 (MQ=60)
TTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCT < SRR4302536.6430827/94‑1 (MQ=60)
TTCAATTTCAGGTTTTGACCGGCCGGCATTTGTTTACCACCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCT < SRR4302536.6538795/94‑1 (MQ=60)
TGAATCTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTG < SRR4302536.988625/94‑1 (MQ=60)
GAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGG < SRR4302536.3628613/94‑1 (MQ=60)
AATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGT < SRR4302536.4726725/94‑1 (MQ=60)
AATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGT < SRR4302536.2844791/94‑1 (MQ=60)
ATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTC > SRR4302536.1455113/1‑94 (MQ=60)
TTCAGGTTCTGACCGTCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGGCGG > SRR4302536.2569575/1‑94 (MQ=60)
TCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGT < SRR4302536.2894295/94‑1 (MQ=60)
CAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTT < SRR4302536.6592744/94‑1 (MQ=60)
AGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTT < SRR4302536.5079911/94‑1 (MQ=60)
GGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTC > SRR4302536.942751/1‑94 (MQ=60)
GTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGcggggttca > SRR4302536.4746176/1‑85 (MQ=60)
GTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCA > SRR4302536.6433266/1‑94 (MQ=60)
TTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAG > SRR4302536.3146424/1‑94 (MQ=60)
TTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAG < SRR4302536.6700747/94‑1 (MQ=60)
CTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCC > SRR4302536.6925087/1‑94 (MQ=60)
CTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCC < SRR4302536.5671162/94‑1 (MQ=60)
TGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCA < SRR4302536.5538509/94‑1 (MQ=60)
TGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCA < SRR4302536.1973557/94‑1 (MQ=60)
GACCGTCCAGCATGTGTTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAG < SRR4302536.2620817/94‑1 (MQ=60)
GACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAG > SRR4302536.5311112/1‑94 (MQ=60)
AACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAG < SRR4302536.5495381/94‑1 (MQ=60)
GCCGGCCAGCGTGTGGTTACCATCAGCCACGACGTGATCGTCTTCAACCGCAGCGATTTCACCCGGTACCGGTCCCTGGTCGGTTTCAGCCAGG < SRR4302536.6252015/94‑1 (MQ=60)
ACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGG < SRR4302536.6831328/94‑1 (MQ=60)
ACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGG < SRR4302536.3933741/94‑1 (MQ=60)
ACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGG < SRR4302536.3738126/94‑1 (MQ=60)
CCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGA > SRR4302536.4893711/1‑94 (MQ=60)
CGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAA > SRR4302536.6022271/1‑94 (MQ=60)
GGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAA < SRR4302536.5209583/94‑1 (MQ=60)
GGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAA < SRR4302536.5303455/94‑1 (MQ=60)
GCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAAC > SRR4302536.1962449/1‑94 (MQ=60)
GCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAAC > SRR4302536.2429376/1‑94 (MQ=60)
GCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAAC > SRR4302536.6544465/1‑94 (MQ=60)
GCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAAC < SRR4302536.2332088/94‑1 (MQ=60)
CCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACG > SRR4302536.1903973/1‑94 (MQ=60)
CCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACG < SRR4302536.4573266/94‑1 (MQ=60)
CAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGCTTCACCCACGCAACGC > SRR4302536.2946834/1‑94 (MQ=60)
AGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCA > SRR4302536.5288842/1‑94 (MQ=60)
AGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCA > SRR4302536.3610201/1‑94 (MQ=60)
GCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCAT < SRR4302536.6273748/94‑1 (MQ=60)
CATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATA > SRR4302536.755294/1‑94 (MQ=60)
CATGAGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATA < SRR4302536.3532519/94‑1 (MQ=60)
ATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGaacctggtcgggtttagcccagaaaagcataac > SRR4302536.196815/1‑61 (MQ=60)
ATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATAC < SRR4302536.2184102/94‑1 (MQ=60)
ATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATAC < SRR4302536.6454231/94‑1 (MQ=60)
ATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATAC < SRR4302536.5224639/94‑1 (MQ=60)
TGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACC < SRR4302536.5167939/94‑1 (MQ=60)
TGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACC > SRR4302536.2507006/1‑94 (MQ=60)
GTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCT < SRR4302536.6308300/94‑1 (MQ=60)
GGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTAC < SRR4302536.4659847/94‑1 (MQ=60)
GGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTAC < SRR4302536.4418772/94‑1 (MQ=60)
gtgccctccaccaacgcgtgatcggttttcACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCT < SRR4302536.2841171/64‑1 (MQ=60)
TTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCT > SRR4302536.5389141/1‑94 (MQ=60)
TTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCT < SRR4302536.2168170/94‑1 (MQ=60)
TTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCT < SRR4302536.2297907/94‑1 (MQ=60)
TACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTG > SRR4302536.4621434/1‑94 (MQ=60)
TACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTG > SRR4302536.4163070/1‑94 (MQ=60)
TACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTG < SRR4302536.1855329/94‑1 (MQ=60)
TACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTG < SRR4302536.163998/94‑1 (MQ=60)
TACCATCAACCACGACGTGATCGTCTTCAACCACAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTG < SRR4302536.254037/94‑1 (MQ=60)
CCAGCAACCACGACGTGATCATCTTCAACCGCAGCGATTTCAACCGGTACCGAACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCA < SRR4302536.3053330/94‑1 (MQ=60)
CATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAG > SRR4302536.5724861/1‑94 (MQ=60)
CATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAG < SRR4302536.239093/94‑1 (MQ=60)
CATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAG > SRR4302536.2711852/1‑94 (MQ=60)
ATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGT < SRR4302536.46815/94‑1 (MQ=60)
ATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGT > SRR4302536.3949973/1‑94 (MQ=60)
ATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGT < SRR4302536.876879/94‑1 (MQ=60)
ATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCCGACCCTGGTCGGGTTCAGCCAGGAAACGCATACCTACCTGCAGT > SRR4302536.4199839/1‑94 (MQ=60)
TCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTT > SRR4302536.4011938/1‑94 (MQ=60)
AACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCA > SRR4302536.4729659/1‑94 (MQ=60)
ACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCAT < SRR4302536.4277360/94‑1 (MQ=60)
CCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATC < SRR4302536.2348595/94‑1 (MQ=60)
CCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATC < SRR4302536.5888354/94‑1 (MQ=60)
CACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCA < SRR4302536.5057193/94‑1 (MQ=60)
CACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCA < SRR4302536.682091/94‑1 (MQ=60)
ACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAA > SRR4302536.6359496/1‑94 (MQ=60)
CGACGTGATCCTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAAC < SRR4302536.5081648/94‑1 (MQ=60)
GACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACG > SRR4302536.4796214/1‑94 (MQ=60)
GACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACG > SRR4302536.4401785/1‑94 (MQ=60)
AACGTGATCATCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACG < SRR4302536.452343/94‑1 (MQ=60)
CGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCC < SRR4302536.1340435/94‑1 (MQ=60)
CGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCC < SRR4302536.5317650/94‑1 (MQ=60)
TGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCA > SRR4302536.189591/1‑94 (MQ=60)
TGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCA > SRR4302536.5881386/1‑94 (MQ=60)
TGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCA > SRR4302536.3861309/1‑94 (MQ=60)
TGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCA < SRR4302536.2366710/94‑1 (MQ=60)
GATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCAT > SRR4302536.407222/1‑94 (MQ=60)
GATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCAT < SRR4302536.6105779/94‑1 (MQ=60)
GATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCAT < SRR4302536.3614485/94‑1 (MQ=60)
GACCGTCTTCAACCGCAGCGATTGCACCGGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCACCGGCCAT < SRR4302536.6595598/94‑1 (MQ=60)
TCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAA > SRR4302536.5306257/1‑94 (MQ=60)
CGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAA > SRR4302536.4799916/1‑94 (MQ=60)
CGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAA > SRR4302536.6081867/1‑94 (MQ=60)
GTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAAT > SRR4302536.5383441/1‑94 (MQ=60)
GTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAAT > SRR4302536.6519549/1‑94 (MQ=60)
GTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAAT > SRR4302536.1603312/1‑94 (MQ=60)
GTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGGCGGGTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAAT > SRR4302536.1258413/1‑94 (MQ=60)
TCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATA > SRR4302536.2101779/1‑94 (MQ=60)
TCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATA < SRR4302536.509753/94‑1 (MQ=60)
CTTCATCCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAACCTCATACCTACCTGCAGTGCATCAACGCCCATAAATAC < SRR4302536.6255805/94‑1 (MQ=60)
CTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATAC < SRR4302536.856510/94‑1 (MQ=60)
CTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATAC > SRR4302536.1052378/1‑94 (MQ=60)
CTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATAC < SRR4302536.6145932/94‑1 (MQ=60)
CTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCACAAATAC > SRR4302536.2845995/1‑94 (MQ=60)
TTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACG < SRR4302536.975364/94‑1 (MQ=60)
TTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACG < SRR4302536.84962/94‑1 (MQ=60)
TTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACG < SRR4302536.1843656/94‑1 (MQ=60)
TCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGaccttagagatcggaagagcgtcgtgtagggaaagagtgtagatctcggtggtc > SRR4302536.1494063/1‑40 (MQ=60)
TCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGT > SRR4302536.2200027/1‑94 (MQ=60)
CAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTC < SRR4302536.535787/94‑1 (MQ=60)
AACCGCAGCGCTTTGAACCGGCACCGGACCCTGGTCGGTTTCAGTCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATACATACGTCT > SRR4302536.3368724/1‑94 (MQ=60)
AACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCT > SRR4302536.5030477/1‑94 (MQ=60)
AACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCT > SRR4302536.5269097/1‑94 (MQ=60)
AACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCT > SRR4302536.388154/1‑94 (MQ=60)
ACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTT > SRR4302536.573260/1‑94 (MQ=60)
ACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTT < SRR4302536.1169971/94‑1 (MQ=60)
ACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTT < SRR4302536.1169972/94‑1 (MQ=60)
ACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTT < SRR4302536.5610897/94‑1 (MQ=60)
ACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTT < SRR4302536.1661045/94‑1 (MQ=60)
CCCCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTT < SRR4302536.6102849/94‑1 (MQ=60)
CGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTA > SRR4302536.1904300/1‑94 (MQ=60)
CGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTA > SRR4302536.470445/1‑94 (MQ=60)
CGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTA > SRR4302536.471138/1‑94 (MQ=60)
CGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTA > SRR4302536.1730506/1‑94 (MQ=60)
CGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTA > SRR4302536.3824201/1‑94 (MQ=60)
CAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAGG < SRR4302536.3506618/94‑1 (MQ=60)
AGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAGGA > SRR4302536.3024032/1‑94 (MQ=60)
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GCGAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGTGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAGGA > NC_000913/3475715‑3475898
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
