Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,533,160 |
A→G |
L116P (CTG→CCG) |
envZ ← |
protein histidine kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,533,160 | 0 | A | G | 97.4%
| 472.5
/ 0.5
| 156 | L116P (CTG→CCG) | envZ | protein histidine kinase |
| Reads supporting (aligned to +/- strand): ref base A (0/4); new base G (76/76); total (76/80) |
| Fisher's exact test for biased strand distribution p-value = 1.21e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.23e-01 |
Only 100 of 164 total aligned reads displayed.
GTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAG > NC_000913/3533071‑3533249
|
gTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGtt < 2:2712635/93‑1 (MQ=255)
tACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTtg > 2:4381031/1‑93 (MQ=255)
tcccAGATTTTTGGGGACAGCCAGGGTTTTAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTtgc < 1:1932674/92‑1 (MQ=255)
aCCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTtgc > 2:2701974/1‑93 (MQ=255)
aCCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTtgc < 1:3988936/93‑1 (MQ=255)
aCCCAGACATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTtgc < 2:279804/93‑1 (MQ=255)
cccAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTtgct < 1:2792405/93‑1 (MQ=255)
cccAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTtgct > 2:4571019/1‑93 (MQ=255)
cccAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTtgct > 1:4235108/1‑93 (MQ=255)
ccAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTtgctg < 1:285620/93‑1 (MQ=255)
aGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTgcg > 2:1042725/1‑93 (MQ=255)
gATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTgcgc > 2:955088/1‑93 (MQ=255)
gATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTCGCTgcgc > 1:646239/1‑93 (MQ=255)
atatTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGCGCCGCCCGGTTGCTGCGcc > 2:1144706/1‑93 (MQ=255)
atTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCAt < 2:2943405/93‑1 (MQ=255)
atTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCAt > 1:1189186/1‑93 (MQ=255)
ttGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATc < 1:523598/93‑1 (MQ=255)
ttGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATc < 1:4093412/93‑1 (MQ=255)
gggCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTg < 1:714701/93‑1 (MQ=255)
gACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATgg > 1:3814259/1‑93 (MQ=255)
aCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGc < 1:4218977/93‑1 (MQ=255)
aGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCtt > 1:660981/1‑93 (MQ=255)
ccAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTaa > 1:2270566/1‑93 (MQ=255)
aGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGa < 1:1586281/93‑1 (MQ=255)
ggTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGCTGGCTTAAGaa > 1:4176280/1‑93 (MQ=255)
ggTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGaa < 1:4422108/93‑1 (MQ=255)
ggTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGaa < 1:3351183/93‑1 (MQ=255)
tttCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTc < 2:1675526/93‑1 (MQ=255)
cAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATa < 2:1049460/93‑1 (MQ=255)
aGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAg > 1:3422951/1‑93 (MQ=255)
gCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAgt > 2:1167814/1‑93 (MQ=255)
ccAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAgtg < 1:987491/93‑1 (MQ=255)
cAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAgtgt > 2:2922915/1‑93 (MQ=255)
cAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAgtgt > 1:3084730/1‑93 (MQ=255)
cAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAgtgt < 2:783846/93‑1 (MQ=255)
aGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGtt < 1:2035828/93‑1 (MQ=255)
aGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGtt < 1:1681714/93‑1 (MQ=255)
aGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGtt > 2:23177/1‑93 (MQ=255)
aGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGtt < 2:2360809/93‑1 (MQ=255)
aGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGtt < 2:583347/93‑1 (MQ=255)
aGACGAAAGGCGAACATATGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCATAAGAATTCATAGTAtt < 2:4211641/93‑1 (MQ=255)
gacgacAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTg > 2:1574142/1‑93 (MQ=255)
gacgacAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTg > 1:572771/1‑93 (MQ=255)
gacgacAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTg > 1:2938374/1‑93 (MQ=255)
cgacAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTgcg > 2:1364030/1‑93 (MQ=255)
gacAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTgcgc < 1:1013150/93‑1 (MQ=255)
acAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGcc > 2:4697049/1‑93 (MQ=255)
aGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCa > 1:2654302/1‑93 (MQ=255)
aGGCGAACTGTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCa < 2:337638/93‑1 (MQ=255)
gCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAAc < 2:290996/93‑1 (MQ=255)
gAACTTTTGTTGACCTCAACGCGCTCTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGc < 2:809422/93‑1 (MQ=255)
gAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGc < 2:3287256/93‑1 (MQ=255)
aaCTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCa < 1:1068196/93‑1 (MQ=255)
aaCTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCa > 1:3166578/1‑93 (MQ=255)
aCTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAg > 1:2574468/1‑93 (MQ=255)
aCTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTCAAGAATTCATAGTGTTGCGCCCAACGCAg > 1:1734406/1‑93 (MQ=255)
tgttgACCTCAACGCGCTCGTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTg < 1:1516749/93‑1 (MQ=255)
gttgGCCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGc < 2:1292707/93‑1 (MQ=255)
gttgACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGc < 1:2747548/93‑1 (MQ=255)
gttgACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGc < 2:4736267/93‑1 (MQ=255)
gACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCctc > 1:1240420/1‑93 (MQ=255)
gACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCctc > 1:3578679/1‑93 (MQ=255)
aCCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCctct > 1:716077/1‑93 (MQ=255)
aCCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCAACTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCctct < 2:1551374/93‑1 (MQ=255)
ccTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCtt < 1:15165/93‑1 (MQ=255)
cTCAACGCGCAGTTCCGTCGTGCCGCCCGGTTGCTGCGCAATCTGATGTCTTAAGAATTCATAGTGTTGCGCCCAACTCAGCCCTGCCTCTTc < 2:1790966/93‑1 (MQ=255)
tCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCg > 2:558370/1‑93 (MQ=255)
tCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCg > 1:4670534/1‑93 (MQ=255)
tCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCg > 1:373088/1‑93 (MQ=255)
aaCGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGc > 2:847316/1‑93 (MQ=255)
aCGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCa < 1:645420/93‑1 (MQ=255)
cgcgCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAg > 1:2197271/1‑93 (MQ=255)
gcgcACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGc > 1:1666717/1‑93 (MQ=255)
cgcACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGcc < 1:296470/93‑1 (MQ=255)
cgcACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGcc > 1:4097145/1‑93 (MQ=255)
cgcACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGcc > 2:3552417/1‑93 (MQ=255)
cgcACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGcc > 2:3552418/1‑93 (MQ=255)
gcACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCt > 2:3778604/1‑93 (MQ=255)
cACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTc > 1:898920/1‑93 (MQ=255)
cACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTc < 1:2039979/93‑1 (MQ=255)
cACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTc > 2:1980334/1‑93 (MQ=255)
cACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTc < 2:174281/93‑1 (MQ=255)
aCTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCg > 1:4182823/1‑93 (MQ=255)
cTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTTAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGt > 2:479235/1‑93 (MQ=255)
cTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGt < 1:2549596/93‑1 (MQ=255)
cTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGt > 2:189054/1‑93 (MQ=255)
ttCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGtt > 1:318962/1‑93 (MQ=255)
ccGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTgg > 2:2959562/1‑93 (MQ=255)
ccGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTgg < 1:3212954/93‑1 (MQ=255)
cGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGa < 2:3118051/93‑1 (MQ=255)
gTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAg < 1:3222354/93‑1 (MQ=255)
gggCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTag < 1:3587537/93‑1 (MQ=255)
gggCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTag < 1:4167224/93‑1 (MQ=255)
gggCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTag > 1:894389/1‑93 (MQ=255)
ggCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTaga > 2:4042354/1‑93 (MQ=255)
ggCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTaga < 2:2302939/93‑1 (MQ=255)
gccgccCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTagag < 2:3272511/93‑1 (MQ=255)
ccgccCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTagaga < 1:2420452/93‑1 (MQ=255)
cgccCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTagagag < 2:4389160/93‑1 (MQ=255)
cgccCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTagagag > 2:1387998/1‑93 (MQ=255)
|
GTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAG > NC_000913/3533071‑3533249
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCC > NC_000913/3533067‑3533253
|
ACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCG > SRR4302544.734770/1‑94 (MQ=60)
ACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCG < SRR4302544.168999/94‑1 (MQ=60)
GCGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGT < SRR4302544.2568114/94‑1 (MQ=60)
GTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTG > SRR4302544.529381/1‑94 (MQ=60)
tcccagatttttgggGACAGCCAGGGTTTTAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCT < SRR4302544.1951378/79‑1 (MQ=60)
ACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCT > SRR4302544.4278274/1‑94 (MQ=60)
ACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCT < SRR4302544.4028642/94‑1 (MQ=60)
CCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTG < SRR4302544.2819294/94‑1 (MQ=60)
CCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGC < SRR4302544.288592/94‑1 (MQ=60)
AGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTCGCTGCGC > SRR4302544.652620/1‑94 (MQ=60)
TATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCAT > SRR4302544.1200992/1‑94 (MQ=60)
TTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCT < SRR4302544.4134136/94‑1 (MQ=60)
TTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCT < SRR4302544.528778/94‑1 (MQ=60)
GGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGA < SRR4302544.721772/94‑1 (MQ=60)
CGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGG > SRR4302544.3852061/1‑94 (MQ=60)
ACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCT < SRR4302544.4261681/94‑1 (MQ=60)
ACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCT < SRR4302544.4261680/94‑1 (MQ=60)
CAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTT > SRR4302544.667517/1‑94 (MQ=60)
AGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTA > SRR4302544.4002385/1‑94 (MQ=60)
AGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTA < SRR4302544.4160889/94‑1 (MQ=60)
GCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAA > SRR4302544.2291939/1‑94 (MQ=60)
CCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAG > SRR4302544.3365932/1‑94 (MQ=60)
AGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGCTGGCTTAAGAA > SRR4302544.4217648/1‑94 (MQ=60)
AGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAA < SRR4302544.1601937/94‑1 (MQ=60)
GGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAAT < SRR4302544.3383162/94‑1 (MQ=60)
GGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAAT < SRR4302544.4466726/94‑1 (MQ=60)
CAGCCAGACGACAGGCGAACTTTTGTTGGGCTCAACGCGCCCCTCCGTCGGGCCGGCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAG < SRR4302544.3014674/94‑1 (MQ=60)
CAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAG > SRR4302544.3455679/1‑94 (MQ=60)
CCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGT < SRR4302544.997185/94‑1 (MQ=60)
CCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGT > SRR4302544.3114112/1‑94 (MQ=60)
AGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTG > SRR4302544.2966591/1‑94 (MQ=60)
AGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTG < SRR4302544.2055504/94‑1 (MQ=60)
AGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTG < SRR4302544.882203/94‑1 (MQ=60)
AGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTG < SRR4302544.1698282/94‑1 (MQ=60)
AGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTG > SRR4302544.578375/1‑94 (MQ=60)
GACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCC < SRR4302544.1023246/94‑1 (MQ=60)
ACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCC < SRR4302544.2717900/94‑1 (MQ=60)
ACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCC > SRR4302544.3108809/1‑94 (MQ=60)
CAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCC > SRR4302544.3614861/1‑94 (MQ=60)
CAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCA > SRR4302544.2679756/1‑94 (MQ=60)
CAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCA > SRR4302544.2601148/1‑94 (MQ=60)
CAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCA < SRR4302544.4324643/94‑1 (MQ=60)
GGCGAACTTTTGTTGACCTCAACGCGCACGTCCGTCGGGCCGCTCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAAC < SRR4302544.618819/94‑1 (MQ=60)
GCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACG > SRR4302544.4104534/1‑94 (MQ=60)
GAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCA > SRR4302544.3196714/1‑94 (MQ=60)
AACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAG < SRR4302544.1078813/94‑1 (MQ=60)
AACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAG < SRR4302544.1252684/94‑1 (MQ=60)
AACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAG > SRR4302544.2599201/1‑94 (MQ=60)
AACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTCAAGAATTCATAGTGTTGCGCCCAACGCAG > SRR4302544.1751406/1‑94 (MQ=60)
CTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGAC < SRR4302544.184149/94‑1 (MQ=60)
CTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGAC < SRR4302544.663431/94‑1 (MQ=60)
TTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTG < SRR4302544.37496/94‑1 (MQ=60)
TGTTGACCTCAACGCGCTCGTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGC < SRR4302544.1531798/94‑1 (MQ=60)
TGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGC < SRR4302544.1531797/94‑1 (MQ=60)
GTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCC < SRR4302544.2774012/94‑1 (MQ=60)
TTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCT > SRR4302544.2318726/1‑94 (MQ=60)
TGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTC > SRR4302544.1252668/1‑94 (MQ=60)
TGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTC > SRR4302544.3613007/1‑94 (MQ=60)
GACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCT > SRR4302544.723151/1‑94 (MQ=60)
CCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTC < SRR4302544.984399/94‑1 (MQ=60)
CCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTC < SRR4302544.15308/94‑1 (MQ=60)
CTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCG > SRR4302544.4716701/1‑94 (MQ=60)
CTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCG > SRR4302544.376902/1‑94 (MQ=60)
CAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGC > SRR4302544.2489358/1‑94 (MQ=60)
ACGCGCACTTCCGTCGGTCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAG < SRR4302544.4219029/94‑1 (MQ=60)
ACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAG > SRR4302544.2217987/1‑94 (MQ=60)
ACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAG < SRR4302544.651796/94‑1 (MQ=60)
CGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGC > SRR4302544.1683132/1‑94 (MQ=60)
CGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGGGTTGCGCCCAACGCAGCCCTGCCTCTTCGGCAGC > SRR4302544.1683291/1‑94 (MQ=60)
GCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCC > SRR4302544.4137919/1‑94 (MQ=60)
CGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCT < SRR4302544.299536/94‑1 (MQ=60)
CGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCT > SRR4302544.1109868/1‑94 (MQ=60)
CGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGAGCCCAACGCAGACCTGCCTCTTCGGCAGCCT > SRR4302544.2029401/1‑94 (MQ=60)
CGCACTTCCGTCGGGCCGCCCGGCTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCC > SRR4302544.2962510/1‑94 (MQ=60)
GCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTC > SRR4302544.907814/1‑94 (MQ=60)
CACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCG > SRR4302544.4224245/1‑94 (MQ=60)
CACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCG < SRR4302544.2059673/94‑1 (MQ=60)
CTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTT < SRR4302544.2574079/94‑1 (MQ=60)
CTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTT > SRR4302544.322278/1‑94 (MQ=60)
TCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGG < SRR4302544.3220191/94‑1 (MQ=60)
CCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGA > SRR4302544.161302/1‑94 (MQ=60)
CCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGA < SRR4302544.3243597/94‑1 (MQ=60)
CCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGA < SRR4302544.2826344/94‑1 (MQ=60)
GTCGGGCCTCCCGGTTGCTGCACCATCTGATGGCTTAAGAATTCATAGTGTTGCGCAAAACGCAGACCTGGTTCTTCGGCAGCCTCGTTGGAGT < SRR4302544.824397/94‑1 (MQ=60)
GTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGT < SRR4302544.3253121/94‑1 (MQ=60)
GGCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGT < SRR4302544.3441540/94‑1 (MQ=60)
TCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTA < SRR4302544.2142820/94‑1 (MQ=60)
CGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAG > SRR4302544.903237/1‑94 (MQ=60)
GGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGA < SRR4302544.3621973/94‑1 (MQ=60)
GGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGA < SRR4302544.4208511/94‑1 (MQ=60)
GGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAG < SRR4302544.3154517/94‑1 (MQ=60)
CCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAG < SRR4302544.4493174/94‑1 (MQ=60)
CCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAG < SRR4302544.2443502/94‑1 (MQ=60)
CGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGA < SRR4302544.696440/94‑1 (MQ=60)
CCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGA > SRR4302544.704607/1‑94 (MQ=60)
GGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCC > SRR4302544.3901181/1‑94 (MQ=60)
GGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCC > SRR4302544.1211299/1‑94 (MQ=60)
GGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCC > SRR4302544.2529644/1‑94 (MQ=60)
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ACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCC > NC_000913/3533067‑3533253
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
