Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I2 R1	1475	266.7	13469680	98.2%	13227225	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,533,160	A→G	L116P (CTG→CCG)	envZ ←	protein histidine kinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,533,160	0	A	G	100.0%	860.8 / NA	266	L116P (CTG→CCG)	envZ	protein histidine kinase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (120/146); total (120/146)

Only 100 of 278 total aligned reads displayed.

CGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGA  >  NC_000913/3533070‑3533248

 gTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGtt                                                                                       >  1:1795062/1‑93 (MQ=255)

  tACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTtg                                                                                      >  1:580085/1‑93 (MQ=255)

  tACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTtg                                                                                      >  1:2912205/1‑93 (MQ=255)

   aCCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTtgc                                                                                     <  1:1137199/93‑1 (MQ=255)

   aCCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTtgc                                                                                     <  1:6566613/93‑1 (MQ=255)

   aCCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTtgc                                                                                     <  1:3126136/93‑1 (MQ=255)

     ccAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTtgctg                                                                                   >  2:3846816/1‑93 (MQ=255)

       aGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTgcg                                                                                 >  2:296910/1‑93 (MQ=255)

       aGATATTGGGCCACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTgcg                                                                                 <  1:803057/93‑1 (MQ=255)

        gATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTgcgc                                                                                >  1:6197068/1‑93 (MQ=255)

        gATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTgcgc                                                                                <  1:5515831/93‑1 (MQ=255)

        gATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTgcgc                                                                                >  1:3545642/1‑93 (MQ=255)

         atatTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGcc                                                                               <  2:3947468/93‑1 (MQ=255)

         atatTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGcc                                                                               <  2:2826644/93‑1 (MQ=255)

          tatTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCa                                                                              <  2:6329534/93‑1 (MQ=255)

          tatTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCa                                                                              >  1:1022572/1‑93 (MQ=255)

           atTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCAt                                                                             <  2:6537193/93‑1 (MQ=255)

             tGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCt                                                                           <  2:1227566/93‑1 (MQ=255)

                gCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGAt                                                                        <  2:83733/93‑1 (MQ=255)

                gCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGAt                                                                        <  1:4275387/93‑1 (MQ=255)

                gCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGAt                                                                        <  1:2392974/93‑1 (MQ=255)

                 ggACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATg                                                                       <  1:4407701/92‑1 (MQ=255)

                 cGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATg                                                                       <  2:74737/93‑1 (MQ=255)

                  gACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATgg                                                                      >  1:2234077/1‑93 (MQ=255)

                   aCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGc                                                                     <  2:1121543/93‑1 (MQ=255)

                   aCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGc                                                                     <  1:4301666/93‑1 (MQ=255)

                    cAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCt                                                                    <  2:2399341/93‑1 (MQ=255)

                    cAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCt                                                                    <  1:4528989/93‑1 (MQ=255)

                     aGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCtt                                                                   >  2:6189181/1‑93 (MQ=255)

                      gCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTa                                                                  >  2:6428080/1‑93 (MQ=255)

                      gCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGGCGGGCCGCCCGGTTGCTGCGCCATCTGATGGATTa                                                                  >  1:5262029/1‑93 (MQ=255)

                       ccAGGTTTTCAGCCTGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTaa                                                                 <  2:5201249/93‑1 (MQ=255)

                        cAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAg                                                                <  2:5876066/93‑1 (MQ=255)

                        cAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAg                                                                <  1:606298/93‑1 (MQ=255)

                         aGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGa                                                               >  2:5083802/1‑93 (MQ=255)

                          gggtttCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGCGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGaa                                                              >  2:4385554/4‑93 (MQ=255)

                             tttCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTc                                                           <  2:2253245/93‑1 (MQ=255)

                              ttCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCa                                                          <  2:1326575/93‑1 (MQ=255)

                              ttCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCa                                                          >  1:3962958/1‑93 (MQ=255)

                               tCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCAt                                                         <  1:1818642/93‑1 (MQ=255)

                                cAGCCAGACGACAGGCGATCTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATa                                                        <  1:4204900/93‑1 (MQ=255)

                                cAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATa                                                        <  2:573427/93‑1 (MQ=255)

                                cAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATa                                                        <  2:1771578/93‑1 (MQ=255)

                                 aGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAg                                                       >  1:2711774/1‑93 (MQ=255)

                                  gCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAgt                                                      >  2:4165771/1‑93 (MQ=255)

                                    cAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAgtgt                                                    >  1:168089/1‑93 (MQ=255)

                                     aGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGtt                                                   >  2:6659114/1‑93 (MQ=255)

                                     aGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGtt                                                   >  2:541454/1‑93 (MQ=255)

                                        cgacAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTgcg                                                >  2:5934402/1‑93 (MQ=255)

                                         gccAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTgcgc                                               <  2:3440425/91‑1 (MQ=255)

                                         gacAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGCATTCATAGTGTTtcgc                                               >  1:3024642/1‑93 (MQ=255)

                                         gacAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTgcgc                                               >  1:946175/1‑93 (MQ=255)

                                             ggCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCaa                                           <  1:3521747/93‑1 (MQ=255)

                                             ggCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCaa                                           >  2:4231223/1‑93 (MQ=255)

                                              gCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAAc                                          <  2:1575474/93‑1 (MQ=255)

                                              gCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAAc                                          <  1:3423736/93‑1 (MQ=255)

                                                gAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGc                                        >  1:2701598/1‑93 (MQ=255)

                                                gAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGc                                        <  2:2668454/93‑1 (MQ=255)

                                                 aaCTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCa                                       >  2:45/1‑93 (MQ=255)

                                                 aaCTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCa                                       <  1:5019639/93‑1 (MQ=255)

                                                   cTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGa                                     <  1:1483024/93‑1 (MQ=255)

                                                    ttttGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGAc                                    >  2:3201503/1‑93 (MQ=255)

                                                    ttttGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGAc                                    <  2:5559419/93‑1 (MQ=255)

                                                     tttGTTGACCTCAACTCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGAcc                                   <  1:6711717/93‑1 (MQ=255)

                                                        tttgACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGc                                <  2:6386093/92‑1 (MQ=255)

                                                        gttgACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGc                                <  2:4056936/93‑1 (MQ=255)

                                                         ttgACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGcc                               <  1:485204/93‑1 (MQ=255)

                                                         ttgACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGcc                               <  1:5995641/93‑1 (MQ=255)

                                                             ccTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCtt                           <  2:6094410/93‑1 (MQ=255)

                                                              cTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTc                          >  1:415083/1‑93 (MQ=255)

                                                              cTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTc                          <  2:345225/93‑1 (MQ=255)

                                                               tCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCg                         >  1:480757/1‑93 (MQ=255)

                                                                cAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCgg                        <  1:5426668/93‑1 (MQ=255)

                                                                  aCGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCa                      <  1:5347452/93‑1 (MQ=255)

                                                                   cgcgCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAg                     <  2:2456090/93‑1 (MQ=255)

                                                                    gcgcACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGc                    >  1:3734747/1‑93 (MQ=255)

                                                                     cgcACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGcc                   >  1:1611238/1‑93 (MQ=255)

                                                                      gcgcTTCCGTCGGGCCGCCCGGTTGGTGCGCCATCTGATGGCTTAAGAATTCATAGGGTTGCGCCCAACGCAGACCTGCGTCTTCGGCAGCCt                  <  1:6679513/90‑1 (MQ=255)

                                                                      gcACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCt                  <  1:3276970/93‑1 (MQ=255)

                                                                      gcACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCt                  <  2:1457866/93‑1 (MQ=255)

                                                                      gcACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCt                  <  2:1673504/93‑1 (MQ=255)

                                                                      gcACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCATCTTCGGCAGCCt                  >  1:3781096/1‑93 (MQ=255)

                                                                       cACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTc                 <  2:5294075/93‑1 (MQ=255)

                                                                         cTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGt               >  2:3262876/1‑93 (MQ=255)

                                                                          ttCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGtt              >  1:2111398/1‑93 (MQ=255)

                                                                           tCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTg             <  2:3172942/93‑1 (MQ=255)

                                                                           tCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTg             >  2:4797563/1‑93 (MQ=255)

                                                                           tCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTg             >  1:6527690/1‑93 (MQ=255)

                                                                           tCCGTCGGGCCGCCCGGTTGCTGCCCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCCGCAGCCTCGTTg             >  1:1191148/1‑93 (MQ=255)

                                                                           tCCGGCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTg             <  1:1358619/93‑1 (MQ=255)

                                                                            ccGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTgg            <  1:5111288/93‑1 (MQ=255)

                                                                             cGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGa           <  1:20603/93‑1 (MQ=255)

                                                                              gTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAg          >  1:335385/1‑93 (MQ=255)

                                                                              gTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAg          >  1:6400749/1‑93 (MQ=255)

                                                                              gTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAg          >  1:5842601/1‑93 (MQ=255)

                                                                                 gggCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTag       >  1:5321697/1‑93 (MQ=255)

                                                                                  ggCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTaga      >  2:2587909/1‑93 (MQ=255)

                                                                                  ggCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTaga      <  2:4927904/93‑1 (MQ=255)

                                                                                   gccgccCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTagag     >  1:4675118/1‑93 (MQ=255)

                                                                                    ccgccCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTagaga    <  1:3202880/93‑1 (MQ=255)

CGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGA  >  NC_000913/3533070‑3533248

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

ACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCC  >  NC_000913/3533067‑3533253

ACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCG                                                                                               <  SRR4302536.1239540/94‑1 (MQ=60)

 CGCGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGG                                                                                              >  SRR4302536.2985096/1‑94 (MQ=60)

 CGCGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGG                                                                                              <  SRR4302536.1173815/94‑1 (MQ=60)

   cgtacaaagacattagccaACAGCCAGGTTTTCAGCCAGACGACAGCCGAACTTTCGTTGAACTCAACGCGCACTTCCGTCGGACCCCCCGGTT                                                                                            <  SRR4302536.4638897/75‑1 (MQ=60)

   CGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTT                                                                                            <  SRR4302536.1117254/94‑1 (MQ=60)

   CGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTT                                                                                            >  SRR4302536.1849253/1‑94 (MQ=60)

   CGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTT                                                                                            <  SRR4302536.696861/94‑1 (MQ=60)

    GTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTG                                                                                           >  SRR4302536.594805/1‑94 (MQ=60)

    GTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTG                                                                                           >  SRR4302536.887046/1‑94 (MQ=60)

    GTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTG                                                                                           >  SRR4302536.2998187/1‑94 (MQ=60)

     TACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGC                                                                                          <  SRR4302536.6371401/94‑1 (MQ=60)

      acccatctattggcatacacCCAGGTTTGCAGCCAGACGACAGGCGAGCTTTTGTTGACCTCAACGCGCACTTCCGCCGGGCCGCCCGGTTGCT                                                                                         <  SRR4302536.116635/74‑1 (MQ=60)

      ACCCAGATATTGGGCGACAGCGAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCT                                                                                         <  SRR4302536.1639125/94‑1 (MQ=60)

      ACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCT                                                                                         <  SRR4302536.4343558/94‑1 (MQ=60)

      ACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCT                                                                                         <  SRR4302536.1171393/94‑1 (MQ=60)

      ACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCT                                                                                         <  SRR4302536.3217496/94‑1 (MQ=60)

      ACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCT                                                                                         <  SRR4302536.6762059/94‑1 (MQ=60)

       CCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTG                                                                                        >  SRR4302536.1194298/1‑94 (MQ=60)

       CCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTG                                                                                        >  SRR4302536.3866276/1‑94 (MQ=60)

        CCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGC                                                                                       <  SRR4302536.4035816/94‑1 (MQ=60)

         CAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGTG                                                                                      >  SRR4302536.653897/1‑94 (MQ=60)

         CAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCG                                                                                      <  SRR4302536.6037690/94‑1 (MQ=60)

         CAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCG                                                                                      >  SRR4302536.1942316/1‑94 (MQ=60)

          AGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGC                                                                                     >  SRR4302536.3651642/1‑94 (MQ=60)

          AGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGC                                                                                     >  SRR4302536.6381648/1‑94 (MQ=60)

          AGATATTGGGCCACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGC                                                                                     <  SRR4302536.826603/94‑1 (MQ=60)

           GATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCC                                                                                    >  SRR4302536.3225406/1‑94 (MQ=60)

           GATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCC                                                                                    <  SRR4302536.5680328/94‑1 (MQ=60)

            ATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACATGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCA                                                                                   >  SRR4302536.4959610/1‑94 (MQ=60)

            ATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCA                                                                                   >  SRR4302536.4428159/1‑94 (MQ=60)

            ATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCA                                                                                   >  SRR4302536.1052851/1‑94 (MQ=60)

              ATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATC                                                                                 <  SRR4302536.3157968/94‑1 (MQ=60)

              ATTGGGCGACAGCCAGGCTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCTCTTCCGTCGGGCCGCCCGGTTGCGGCGCCATC                                                                                 <  SRR4302536.3446260/94‑1 (MQ=60)

                TGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTG                                                                               <  SRR4302536.1424113/94‑1 (MQ=60)

                 GGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGA                                                                              >  SRR4302536.2953254/1‑94 (MQ=60)

                 GGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGA                                                                              >  SRR4302536.5916432/1‑94 (MQ=60)

                  tgcgacagcccgtcTTTCAACCAGACGACAGGCGAACTTTTGTTGACCTCAACCCGCACTTCCCTCGGGCCGCCCGGTTGCTGCGCCATCTGAT                                                                             <  SRR4302536.4790033/80‑1 (MQ=60)

                  GGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGAT                                                                             <  SRR4302536.5455814/94‑1 (MQ=60)

                  GGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGAT                                                                             <  SRR4302536.2801400/94‑1 (MQ=60)

                   GCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATG                                                                            <  SRR4302536.2465415/94‑1 (MQ=60)

                   GCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATG                                                                            <  SRR4302536.4402832/94‑1 (MQ=60)

                   GCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATG                                                                            <  SRR4302536.5617159/94‑1 (MQ=60)

                    GGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGG                                                                           <  SRR4302536.4539543/94‑1 (MQ=60)

                    CGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGG                                                                           >  SRR4302536.2301650/1‑94 (MQ=60)

                     GACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGC                                                                          <  SRR4302536.5462123/94‑1 (MQ=60)

                      ACAGCCAGTTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCT                                                                         <  SRR4302536.2203627/94‑1 (MQ=60)

                      ACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCT                                                                         <  SRR4302536.4430280/94‑1 (MQ=60)

                       CAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTT                                                                        <  SRR4302536.4664767/94‑1 (MQ=60)

                       CAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTT                                                                        >  SRR4302536.1356616/1‑94 (MQ=60)

                        AGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTA                                                                       >  SRR4302536.4235652/1‑94 (MQ=60)

                        AGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTA                                                                       >  SRR4302536.3112768/1‑94 (MQ=60)

                        AGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGGCGGGCCGCCCGGTTGCTGCGCCATCTGATGGATTA                                                                       >  SRR4302536.5418858/1‑94 (MQ=60)

                          CCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAG                                                                     <  SRR4302536.1861668/94‑1 (MQ=60)

                          CAAGGTTTTCAGCCAGACGACAGACGAGATTTTGTTCACCTCAACGAGCACTTCCGTCGGGCCGCCCGGTTGCTGAGCCGCCTGATGGCTTAAG                                                                     <  SRR4302536.1861669/94‑1 (MQ=48)

                           CAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGA                                                                    <  SRR4302536.624363/94‑1 (MQ=60)

                            AGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAA                                                                   <  SRR4302536.3213941/94‑1 (MQ=60)

                            AGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAA                                                                   >  SRR4302536.5486958/1‑94 (MQ=60)

                             GGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAAT                                                                  <  SRR4302536.1772128/94‑1 (MQ=60)

                             GGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAAT                                                                  <  SRR4302536.5239847/94‑1 (MQ=60)

                              GTTTTCAGCCAGACGACAGGCGAACTTTTGTTGAACTCAACGCGCACTTACGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATT                                                                 >  SRR4302536.4520194/1‑94 (MQ=60)

                               TTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTC                                                                <  SRR4302536.3377043/94‑1 (MQ=60)

                               TTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTC                                                                >  SRR4302536.4679766/1‑94 (MQ=60)

                                TTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCA                                                               >  SRR4302536.1706851/1‑94 (MQ=60)

                                TTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCA                                                               >  SRR4302536.5736491/1‑94 (MQ=60)

                                TTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCA                                                               >  SRR4302536.4080612/1‑94 (MQ=60)

                                 TTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCAT                                                              <  SRR4302536.3300059/94‑1 (MQ=60)

                                  TCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATA                                                             <  SRR4302536.1873511/94‑1 (MQ=60)

                                   CAGCCAGACGACAGGCGATCTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAG                                                            <  SRR4302536.4329895/94‑1 (MQ=60)

                                   CAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAG                                                            <  SRR4302536.3634658/94‑1 (MQ=60)

                                   CAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAG                                                            <  SRR4302536.1183061/94‑1 (MQ=60)

                                   CAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAG                                                            >  SRR4302536.2792664/1‑94 (MQ=60)

                                    AGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGT                                                           >  SRR4302536.5314706/1‑94 (MQ=60)

                                    AGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGT                                                           <  SRR4302536.1282384/94‑1 (MQ=60)

                                    AGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGT                                                           >  SRR4302536.2425191/1‑94 (MQ=60)

                                     GCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTG                                                          <  SRR4302536.6891444/94‑1 (MQ=60)

                                     GCCAGACGACAGCGGATGTTTTGTTGACCTCAACTCGCGTTTCCGTCGGGCCGCCCGTTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTG                                                          <  SRR4302536.1804637/94‑1 (MQ=57)

                                      CCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGT                                                         >  SRR4302536.172469/1‑94 (MQ=60)

                                       CAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTT                                                        >  SRR4302536.4340844/1‑94 (MQ=60)

                                       CAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTT                                                        <  SRR4302536.2192320/94‑1 (MQ=60)

                                        AGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTG                                                       >  SRR4302536.4982411/1‑94 (MQ=60)

                                        AGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTG                                                       <  SRR4302536.6286735/94‑1 (MQ=60)

                                        AGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTG                                                       <  SRR4302536.351651/94‑1 (MQ=60)

                                         GACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGC                                                      >  SRR4302536.665742/1‑94 (MQ=60)

                                          ACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTGCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCG                                                     <  SRR4302536.1761404/94‑1 (MQ=60)

                                           CGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGCATTCATAGTGTTTCGC                                                    >  SRR4302536.3113508/1‑94 (MQ=60)

                                           CGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGC                                                    >  SRR4302536.974121/1‑94 (MQ=60)

                                           CGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGC                                                    >  SRR4302536.4429260/1‑94 (MQ=60)

                                           CGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGC                                                    >  SRR4302536.3528068/1‑94 (MQ=60)

                                             ACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCC                                                  >  SRR4302536.82158/1‑94 (MQ=60)

                                              CAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCA                                                 >  SRR4302536.5609749/1‑94 (MQ=60)

                                              CAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCA                                                 >  SRR4302536.3877413/1‑94 (MQ=60)

                                                GGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAAC                                               <  SRR4302536.3626973/94‑1 (MQ=60)

                                                 GCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACG                                              <  SRR4302536.5601051/94‑1 (MQ=60)

                                                 GCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACG                                              <  SRR4302536.3525642/94‑1 (MQ=60)

                                                  CGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGC                                             >  SRR4302536.2782198/1‑94 (MQ=60)

                                                   GAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCA                                            >  SRR4302536.2503862/1‑94 (MQ=60)

                                                    AACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAG                                           <  SRR4302536.5170111/94‑1 (MQ=60)

                                                    AACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAG                                           <  SRR4302536.6006807/94‑1 (MQ=60)

                                                     ACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGA                                          >  SRR4302536.5075960/1‑94 (MQ=60)

                                                      CTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGAC                                         <  SRR4302536.1526834/94‑1 (MQ=60)

                                                       TTTTGTTGGCCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACC                                        >  SRR4302536.5566987/1‑94 (MQ=60)

                                                        TTTGTTGACCTCAACTCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCT                                       <  SRR4302536.6910980/94‑1 (MQ=60)

                                                         TTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTG                                      >  SRR4302536.5992638/1‑94 (MQ=60)

                                                          TGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGC                                     >  SRR4302536.4442612/1‑94 (MQ=60)

                                                           GCTGACCGCAACGCTCACTTCCGTCGGGCCGCCCGGTGGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCC                                    <  SRR4302536.2968294/94‑1 (MQ=60)

                                                            TTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCT                                   <  SRR4302536.6174373/94‑1 (MQ=60)

                                                            TTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCT                                   <  SRR4302536.497799/94‑1 (MQ=60)

                                                             TGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGCCCTGCCTC                                  <  SRR4302536.6802189/94‑1 (MQ=60)

                                                             TGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTC                                  >  SRR4302536.1678927/1‑94 (MQ=60)

                                                              GACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCT                                 >  SRR4302536.4902447/1‑94 (MQ=60)

                                                              GACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCT                                 <  SRR4302536.4717134/94‑1 (MQ=60)

                                                              GACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCT                                 >  SRR4302536.4514775/1‑94 (MQ=60)

                                                              GACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCT                                 >  SRR4302536.6754069/1‑94 (MQ=60)

                                                               ACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTT                                <  SRR4302536.4923384/94‑1 (MQ=60)

                                                               ACCTCAACACGCACGTCCGTCGGCCCCCCCGGTTGCTGCGCCATCTGATGTCTTAAGAATTCATAGTGTCGCGCCCAACGCAGACCTGCCTCTT                                <  SRR4302536.4608851/94‑1 (MQ=60)

                                                                CCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTC                               >  SRR4302536.426029/1‑94 (MQ=60)

                                                                 ctaacCGCGCCCTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGATTAAGAATTCATAGTGTTGCCCCCAACGCAGACCTGCCTCTTCG                              <  SRR4302536.2653178/89‑1 (MQ=60)

                                                                 CTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCG                              >  SRR4302536.493256/1‑94 (MQ=60)

                                                                   CAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGTAGACCTGCCTCTTCGGC                            <  SRR4302536.3661332/94‑1 (MQ=60)

                                                                   CAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGC                            <  SRR4302536.5081047/94‑1 (MQ=60)

                                                                   CAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGC                            <  SRR4302536.5588913/94‑1 (MQ=60)

                                                                   CAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGC                            >  SRR4302536.3037606/1‑94 (MQ=60)

                                                                   CAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGA                            >  SRR4302536.5505196/1‑94 (MQ=60)

                                                                    AACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCA                           <  SRR4302536.345253/94‑1 (MQ=60)

                                                                     ACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAG                          <  SRR4302536.5507130/94‑1 (MQ=60)

                                                                      CGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGC                         >  SRR4302536.3846369/1‑94 (MQ=60)

                                                                       GCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCC                        >  SRR4302536.1658217/1‑94 (MQ=60)

                                                                       GCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCC                        >  SRR4302536.872372/1‑94 (MQ=60)

                                                                        CGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCT                       <  SRR4302536.689890/94‑1 (MQ=60)

                                                                        CGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCATCTTCGGCAGCCT                       >  SRR4302536.3893910/1‑94 (MQ=60)

                                                                         GCGCTTCCGTCGGGCCGCCCGGTTGGTGCGCCATCTGATGGCTTAAGAATTCATAGGGTTGCGCCCAACGCAGACCTGCGTCTTCGGCAGCCTC                      <  SRR4302536.6877947/94‑1 (MQ=60)

                                                                         GCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTC                      <  SRR4302536.5389797/94‑1 (MQ=60)

                                                                         GCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTC                      <  SRR4302536.3373283/94‑1 (MQ=60)

                                                                         GCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTC                      <  SRR4302536.3939235/94‑1 (MQ=60)

                                                                          CACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCG                     >  SRR4302536.4657733/1‑94 (MQ=60)

                                                                          CACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCG                     <  SRR4302536.6172105/94‑1 (MQ=60)

                                                                           ACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGT                    >  SRR4302536.3826915/1‑94 (MQ=60)

                                                                            CTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTT                   <  SRR4302536.186015/94‑1 (MQ=60)

                                                                            CTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTT                   >  SRR4302536.2174859/1‑94 (MQ=60)

                                                                            CTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTT                   >  SRR4302536.6202382/1‑94 (MQ=60)

                                                                            CTTCCGTCGAGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTT                   >  SRR4302536.6749596/1‑94 (MQ=60)

                                                                             TTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTG                  >  SRR4302536.6722112/1‑94 (MQ=60)

                                                                             TTCCGTCGGGCCGCCCGGTTGCTGCCCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCCGCAGCCTCGTTG                  >  SRR4302536.1226971/1‑94 (MQ=60)

                                                                              TCCGGCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGG                 <  SRR4302536.1399111/94‑1 (MQ=60)

                                                                               CCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGA                <  SRR4302536.5264032/94‑1 (MQ=60)

                                                                                CGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAG               >  SRR4302536.344277/1‑94 (MQ=60)

                                                                                CGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAG               >  SRR4302536.6016691/1‑94 (MQ=60)

                                                                                CGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAG               <  SRR4302536.21184/94‑1 (MQ=60)

                                                                                CGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAG               >  SRR4302536.1417580/1‑94 (MQ=60)

                                                                                CGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAG               >  SRR4302536.6591787/1‑94 (MQ=60)

                                                                                CGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAG               <  SRR4302536.3250563/94‑1 (MQ=60)

                                                                                 GTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGT              >  SRR4302536.2683335/1‑94 (MQ=60)

                                                                                 GTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTATTCGGCAGCCTCGTTGGAGT              <  SRR4302536.6697385/94‑1 (MQ=60)

                                                                                  GCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTA             <  SRR4302536.2051210/94‑1 (MQ=60)

                                                                                   CGGGCCGCGCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAG            <  SRR4302536.4559250/94‑1 (MQ=60)

                                                                                   CGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAG            >  SRR4302536.5480668/1‑94 (MQ=60)

                                                                                    GGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGA           >  SRR4302536.3464956/1‑94 (MQ=60)

                                                                                     GGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAG          >  SRR4302536.2783050/1‑94 (MQ=60)

                                                                                     GGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAG          >  SRR4302536.4815706/1‑94 (MQ=60)

                                                                                     GGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTGGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGGAGAG          <  SRR4302536.2174260/94‑1 (MQ=60)

                                                                                       CCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAG        <  SRR4302536.3296803/94‑1 (MQ=60)

                                                                                       CCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAG        <  SRR4302536.4155357/94‑1 (MQ=60)

                                                                                       CCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAG        <  SRR4302536.429495/94‑1 (MQ=60)

                                                                                       CCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAG        <  SRR4302536.6506983/94‑1 (MQ=60)

                                                                                        CGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGA       >  SRR4302536.2394726/1‑94 (MQ=60)

                                                                                           CCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGAT    >  SRR4302536.4705664/1‑94 (MQ=60)

                                                                                            CGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATC   <  SRR4302536.439621/94‑1 (MQ=60)

                                                                                             GGTTGCTGCGCCATCTGATGGCTTAAGATTTCATAGTGTTGCGCCCACCGCAGCCCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCC  <  SRR4302536.6132275/94‑1 (MQ=60)

                                                                                             GGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCC  >  SRR4302536.2506175/1‑94 (MQ=60)

ACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCC  >  NC_000913/3533067‑3533253

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`