Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,052,844 |
T→C |
I5M (ATA→ATG) |
glnG ← |
GlnG |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,052,844 | 0 | T | C | 96.7%
| 456.5
/ 3.9
| 151 | I5M (ATA→ATG) | glnG | GlnG |
| Reads supporting (aligned to +/- strand): ref base T (1/4); new base C (66/80); total (67/84) |
| Fisher's exact test for biased strand distribution p-value = 3.83e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.64e-01 |
Only 100 of 154 total aligned reads displayed.
GTTCTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACTATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAATT > NC_000913/4052754‑4052933
|
ttCTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATc > 2:3696609/1‑93 (MQ=255)
tctcAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATcc > 1:35980/1‑93 (MQ=255)
ctcAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATcac > 1:3374030/1‑91 (MQ=255)
tcAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCt < 2:593352/93‑1 (MQ=255)
aaaCGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCg > 1:2383767/1‑93 (MQ=255)
aaCGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGt < 1:4080146/93‑1 (MQ=255)
aaCGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGt > 2:4697413/1‑93 (MQ=255)
aCGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGtt < 1:1370986/93‑1 (MQ=255)
aCGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGtt > 1:1471006/1‑93 (MQ=255)
gtcgtACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGc < 2:1996271/93‑1 (MQ=255)
gtcgtACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGc < 2:2454812/93‑1 (MQ=255)
tcgtACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCa < 1:164707/93‑1 (MQ=255)
cgtACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCAt < 2:3236475/93‑1 (MQ=255)
gtACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATa > 2:751286/1‑93 (MQ=255)
tACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATaa < 2:3159030/93‑1 (MQ=255)
aCAGGTTTAACCTTCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATaaa < 1:1156008/93‑1 (MQ=255)
aCAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATaaa < 1:1156009/93‑1 (MQ=255)
cAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAAc < 1:4201879/93‑1 (MQ=255)
tAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCAc < 2:3491600/93‑1 (MQ=255)
aaaCCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCAcc > 1:2784347/1‑93 (MQ=255)
aCCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCtt > 1:4356923/1‑93 (MQ=255)
ccTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCttt > 2:4580056/1‑93 (MQ=255)
cTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTa < 2:1247877/93‑1 (MQ=255)
cccAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCTTAAACGTCACCTTTATTTc > 2:1910362/1‑93 (MQ=255)
cccAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTc < 2:638446/93‑1 (MQ=255)
ccAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTcc > 1:2822735/1‑93 (MQ=255)
cAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCt > 2:4699001/1‑93 (MQ=255)
agcgagcgCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCta > 1:3404742/1‑92 (MQ=255)
agcgagcgCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTg < 2:2617723/93‑1 (MQ=255)
gcgagcgCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACTATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGa < 1:3493883/93‑1 (MQ=255)
gcgagcgCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGa < 1:3349807/93‑1 (MQ=255)
gcgagcgCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGa < 2:3378200/93‑1 (MQ=255)
gagcgCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATa < 2:500110/93‑1 (MQ=255)
gagcgCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATa < 1:4375880/93‑1 (MQ=255)
gagcgCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATa > 2:3422605/1‑93 (MQ=255)
cgcACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGc < 2:4379921/93‑1 (MQ=255)
cgcACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGc < 1:597875/93‑1 (MQ=255)
cgcACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGc < 1:2569166/93‑1 (MQ=255)
gcACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCa < 1:2855612/93‑1 (MQ=255)
gcACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCa > 1:785651/1‑93 (MQ=255)
cACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAg < 1:4720258/93‑1 (MQ=255)
aCGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACTATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAgg > 2:3988983/1‑93 (MQ=255)
aCGGTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCTCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAgg < 1:1990268/93‑1 (MQ=255)
cGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGt < 2:1209814/93‑1 (MQ=255)
gTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTa > 2:1686713/1‑93 (MQ=255)
gTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTa > 1:3585469/1‑93 (MQ=255)
ttCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCTTCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTaa < 2:2810962/93‑1 (MQ=255)
ttCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTaa > 2:4482970/1‑93 (MQ=255)
tCAAGCACCCACCGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTaaa < 2:4222637/93‑1 (MQ=255)
tCAAGCACCCAACGGATGGAACTATCGCCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTaaa < 1:3649210/93‑1 (MQ=255)
cAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAAc > 1:2646302/1‑93 (MQ=255)
cAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAAc < 2:50302/93‑1 (MQ=255)
aaGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAAcc < 1:2285872/93‑1 (MQ=255)
aGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATACCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCg > 1:4037167/1‑93 (MQ=255)
gCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCga < 2:3935227/93‑1 (MQ=255)
cccAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGaa > 2:464678/1‑93 (MQ=255)
cGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCgg > 1:153740/1‑93 (MQ=255)
ggATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGt > 2:338570/1‑93 (MQ=255)
ggATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGt < 1:723189/93‑1 (MQ=255)
gATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGtt > 1:4600871/1‑92 (MQ=255)
gATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTa < 1:1381411/93‑1 (MQ=255)
gATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTa > 2:4529558/1‑93 (MQ=255)
gATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTa < 1:3471995/93‑1 (MQ=255)
aTGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTAt < 2:3121652/93‑1 (MQ=255)
tGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTACTGATAGGCAGGTAAACCGAGAACTCGGTATg > 1:3056583/1‑93 (MQ=255)
tGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTACTGATAGGCAGGTAAACCGAGAACTCGGTATg > 1:3056584/1‑93 (MQ=255)
gAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGcc > 1:1961631/1‑93 (MQ=255)
gAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGcc < 2:4112560/93‑1 (MQ=255)
gAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGcc < 2:2959312/93‑1 (MQ=255)
aaCTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGccc < 2:1432480/93‑1 (MQ=255)
aaCTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGccc < 1:1084139/93‑1 (MQ=255)
aaCTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGccc < 1:2193757/93‑1 (MQ=255)
aaCTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGccc > 1:3135045/1‑93 (MQ=255)
aaCTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGccc < 2:2272483/93‑1 (MQ=255)
aaCTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGccc < 1:981314/93‑1 (MQ=255)
aCTATCGTCATCGACTACCCAGACTATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCt < 1:4734294/93‑1 (MQ=255)
cTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTg < 2:2503888/93‑1 (MQ=255)
tATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCCGTATGCCCTgc > 2:4589759/1‑92 (MQ=255)
aTCGTCATCGACTACCCAGACTATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGc < 1:1052468/93‑1 (MQ=255)
aTCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGc > 2:351133/1‑93 (MQ=255)
gTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGccga > 2:4185612/1‑91 (MQ=255)
gTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCaa > 2:1934677/1‑93 (MQ=255)
tCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAAc < 1:4078109/93‑1 (MQ=255)
tCATCCACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAAc < 2:283696/93‑1 (MQ=255)
cATCGACTACCCAGACCATCCCTCGTTGCATAACCGTCACCTTTATTCCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACt < 1:4205197/93‑1 (MQ=255)
cATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACt > 1:3777121/1‑93 (MQ=255)
cATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACt < 2:4016642/93‑1 (MQ=255)
aTCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTg > 1:1707539/1‑93 (MQ=255)
tCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTgg > 2:3698493/1‑93 (MQ=255)
aCTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTaa < 1:4572663/93‑1 (MQ=255)
aCTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTaa > 1:2828174/1‑93 (MQ=255)
cTACCCAGACCATCCCTCGTTGCATAAGCGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTaaa < 2:4708860/93‑1 (MQ=255)
tACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAAt > 1:3381931/1‑93 (MQ=255)
tACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTACTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTCGCCAACTGGTACAt > 2:2229294/1‑93 (MQ=255)
cccAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTc < 1:2241561/93‑1 (MQ=255)
aGACTATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAAt < 1:3892574/93‑1 (MQ=255)
aGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAAt > 1:3823130/1‑93 (MQ=255)
gACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAAtt < 2:1011253/93‑1 (MQ=255)
gACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAAtt < 1:2290211/93‑1 (MQ=255)
gACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAAtt > 2:2112608/1‑93 (MQ=255)
|
GTTCTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACTATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAATT > NC_000913/4052754‑4052933
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCCGTTCTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACTATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAATTTTGC > NC_000913/4052751‑4052937
|
GCCGTTCTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACC > SRR4302544.1097865/1‑94 (MQ=60)
GCCGTTCTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACC > SRR4302544.3574614/1‑94 (MQ=60)
GCCGTTCTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACC > SRR4302544.2697825/1‑94 (MQ=60)
CCGTTCTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCA > SRR4302544.2806319/1‑94 (MQ=60)
TTCTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCC > SRR4302544.36331/1‑94 (MQ=60)
TCTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCAC > SRR4302544.3406241/1‑94 (MQ=60)
CAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCG > SRR4302544.2406339/1‑94 (MQ=60)
CAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCG > SRR4302544.3135712/1‑94 (MQ=60)
acctgaggtcgggtaaaaccgtCCCCAGCGAGCGCACGTTCAAGCAACCAACGGATGGAACTATAGTCAGCGACTACCCAGACCATACCTCGTT < SRR4302544.4366552/72‑1 (MQ=60)
AACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTT < SRR4302544.4120737/94‑1 (MQ=60)
AACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTT > SRR4302544.1485577/1‑94 (MQ=60)
AACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTT < SRR4302544.4366551/94‑1 (MQ=60)
ACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTG < SRR4302544.1384636/94‑1 (MQ=60)
TCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCAT < SRR4302544.166323/94‑1 (MQ=60)
ACAGGTTTAACCTTCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAAC < SRR4302544.1167511/94‑1 (MQ=60)
ACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAAC < SRR4302544.1167512/94‑1 (MQ=60)
CAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACG < SRR4302544.4243882/94‑1 (MQ=60)
GTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCA < SRR4302544.1873345/94‑1 (MQ=60)
TAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACC > SRR4302544.2811140/1‑94 (MQ=60)
AACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTT > SRR4302544.4401153/1‑94 (MQ=60)
TGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATT > SRR4302544.3567246/1‑94 (MQ=60)
CCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCC > SRR4302544.2850011/1‑94 (MQ=60)
CAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTG > SRR4302544.3831521/1‑94 (MQ=60)
CAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTA > SRR4302544.3437295/1‑94 (MQ=60)
GCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACTATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGAT < SRR4302544.3527199/94‑1 (MQ=60)
GCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGAT < SRR4302544.3381771/94‑1 (MQ=60)
GAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAG < SRR4302544.4420237/94‑1 (MQ=60)
AGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGG < SRR4302544.2852336/94‑1 (MQ=60)
GCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGC < SRR4302544.944421/94‑1 (MQ=60)
CGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCA < SRR4302544.603732/94‑1 (MQ=60)
CGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCA > SRR4302544.793251/1‑94 (MQ=60)
CGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCA < SRR4302544.2593847/94‑1 (MQ=60)
GCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAG < SRR4302544.2883191/94‑1 (MQ=60)
CACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGG < SRR4302544.4766865/94‑1 (MQ=60)
ACGGTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCTCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGT < SRR4302544.2009589/94‑1 (MQ=60)
CGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTA > SRR4302544.3619882/1‑94 (MQ=60)
GTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAA > SRR4302544.4228715/1‑94 (MQ=60)
GTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAA < SRR4302544.4724123/94‑1 (MQ=60)
TCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAAC < SRR4302544.516885/94‑1 (MQ=60)
TCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAAC > SRR4302544.2671684/1‑94 (MQ=60)
TCAAGCACCCAACGGATGGAACTATCGCCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAAC < SRR4302544.3685620/94‑1 (MQ=60)
AAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCG < SRR4302544.2307418/94‑1 (MQ=60)
AAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATACCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCG > SRR4302544.4077372/1‑94 (MQ=60)
CCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCATCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACT < SRR4302544.2041512/94‑1 (MQ=60)
AACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCG < SRR4302544.3461671/94‑1 (MQ=60)
ACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGG > SRR4302544.155237/1‑94 (MQ=60)
GGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTT > SRR4302544.4646613/1‑94 (MQ=60)
GGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTA < SRR4302544.730304/94‑1 (MQ=60)
GATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTAT < SRR4302544.3039816/94‑1 (MQ=60)
GATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTAT > SRR4302544.2253508/1‑94 (MQ=60)
GATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTAT < SRR4302544.1395205/94‑1 (MQ=60)
GATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTAT < SRR4302544.3505108/94‑1 (MQ=60)
ATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTACTGATAGGCAGGTAAACCGAGAACTCGGTATG > SRR4302544.3085763/1‑94 (MQ=60)
ATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTACTGATAGGCAGGTAAACCGAGAACTCGGTATG > SRR4302544.3085762/1‑94 (MQ=60)
TGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGC > SRR4302544.691382/1‑94 (MQ=60)
GGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCC > SRR4302544.1980670/1‑94 (MQ=60)
GAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCC > SRR4302544.3164823/1‑94 (MQ=60)
AACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCT < SRR4302544.990933/94‑1 (MQ=60)
AACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCT < SRR4302544.4519893/94‑1 (MQ=60)
AACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCT < SRR4302544.1094923/94‑1 (MQ=60)
AACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCT < SRR4302544.2214460/94‑1 (MQ=60)
ACTATCGTCATCGACTACCCAGACTATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTG < SRR4302544.4780976/94‑1 (MQ=60)
ACTATCGTCATCGACTACCCAGACCATCACTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTG < SRR4302544.3324356/94‑1 (MQ=60)
CTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCAGG < SRR4302544.2680892/94‑1 (MQ=60)
ATCGTCATCGACTACCCAGACTATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCC < SRR4302544.1062904/94‑1 (MQ=60)
TCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCA < SRR4302544.2558177/94‑1 (MQ=60)
TCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACT < SRR4302544.4118691/94‑1 (MQ=60)
TCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACT > SRR4302544.3814547/1‑94 (MQ=60)
TCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACT < SRR4302544.4118690/94‑1 (MQ=60)
CATCGACTACCCAGACCATCCCTCGTTGCATAACCGTCACCTTTATTCCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTG < SRR4302544.4247360/94‑1 (MQ=60)
CATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTG > SRR4302544.1724363/1‑94 (MQ=60)
GACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAA > SRR4302544.2855498/1‑94 (MQ=60)
GACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAA > SRR4302544.1421037/1‑94 (MQ=60)
GACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAA > SRR4302544.2311663/1‑94 (MQ=60)
ACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAA < SRR4302544.4618230/94‑1 (MQ=60)
CTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAAT > SRR4302544.3414226/1‑94 (MQ=60)
CTACCCAGACCATCCCTCGTTGCATAAACGGCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAAT > SRR4302544.3414225/1‑94 (MQ=60)
ACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTC > SRR4302544.1156318/1‑94 (MQ=60)
CCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCA < SRR4302544.4061414/94‑1 (MQ=60)
CCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCA < SRR4302544.2262649/94‑1 (MQ=60)
CCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAA > SRR4302544.3668699/1‑94 (MQ=60)
CAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGATAACTCGGTATGCCCTGGCCAACTGGTAAATTCAAT < SRR4302544.158533/94‑1 (MQ=60)
CAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAAT > SRR4302544.3861035/1‑94 (MQ=60)
CAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAAT < SRR4302544.1273575/94‑1 (MQ=60)
AGACTATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAATT < SRR4302544.3931239/94‑1 (MQ=60)
GACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAATTT < SRR4302544.2311798/94‑1 (MQ=60)
GACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAATTT > SRR4302544.2955051/1‑94 (MQ=60)
CCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAATTTTG > SRR4302544.2632364/1‑94 (MQ=60)
CATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAATTTTGC > SRR4302544.436877/1‑94 (MQ=60)
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GCCGTTCTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACTATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAATTTTGC > NC_000913/4052751‑4052937
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
