Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,120,133 |
T→C |
T263A (ACG→GCG) |
ftsN ← |
essential cell division protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,120,133 | 0 | T | C | 99.3%
| 461.9
/ ‑4.6
| 146 | T263A (ACG→GCG) | ftsN | essential cell division protein |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (81/63); total (83/63) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.01e-01 |
Only 100 of 159 total aligned reads displayed.
CTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGTCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAG > NC_000913/4120043‑4120222
|
cTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGcct > 1:4743029/1‑93 (MQ=255)
cTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGcct < 1:1601203/93‑1 (MQ=255)
tttCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGcctc > 1:3060822/1‑93 (MQ=255)
ttCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCctct < 1:1447489/93‑1 (MQ=255)
tCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTg > 2:3691991/1‑93 (MQ=255)
aCCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGcc < 1:2605992/93‑1 (MQ=255)
ccGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGGTTTTCGAGTCAAAGCCTTCTAACGCCAGCTGATCACGTACCGCctcttgct > 2:1229929/1‑89 (MQ=255)
ccGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCt > 2:2444058/1‑93 (MQ=255)
ccGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCt < 1:3242354/93‑1 (MQ=255)
ggCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGtt < 1:2365691/93‑1 (MQ=255)
gCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTc < 1:2160847/93‑1 (MQ=255)
ccAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTcc > 2:3895160/1‑93 (MQ=255)
tGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCACAGCCTTCGAACGCCAGCTGAGCACGTACCGACTCTGCCTGTTCCgcgc > 1:4285958/1‑93 (MQ=255)
gACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACTGCCTCTGCCCGTTCCGCGcc > 2:3073429/1‑93 (MQ=255)
gACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGcc < 1:118343/93‑1 (MQ=255)
gACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGcc < 1:791817/93‑1 (MQ=255)
gACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGcc > 2:3073428/1‑93 (MQ=255)
gACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGcc < 1:1384007/93‑1 (MQ=255)
ccACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCctc > 1:339141/1‑93 (MQ=255)
ccacGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTg < 1:114714/92‑1 (MQ=255)
acacGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTg > 2:3901697/1‑93 (MQ=255)
cacGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTga < 2:1468013/93‑1 (MQ=255)
cacGATGCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTga < 1:3377580/93‑1 (MQ=255)
acGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaa > 2:2831198/1‑93 (MQ=255)
acGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaa > 2:512465/1‑93 (MQ=255)
cGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaac < 2:499456/93‑1 (MQ=255)
gATTCCAGCCATTGTTGGTGGTGATTTTAGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaacg < 1:782414/93‑1 (MQ=255)
gATACCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaacg < 2:2858743/93‑1 (MQ=255)
aTTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaacga < 1:2444058/93‑1 (MQ=255)
ttCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaacgaa > 2:4256098/1‑93 (MQ=255)
ttCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaacgaa > 1:3173093/1‑93 (MQ=255)
ttCCAGCCATTGTTGGTGGTGAGTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaacgaa > 2:2989713/1‑93 (MQ=255)
tCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTTCCTGTTCCGCGCCTCTgaacgaac < 1:2438343/93‑1 (MQ=255)
tCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaacgaac < 1:2874731/93‑1 (MQ=255)
tCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaacgaac < 1:3337452/93‑1 (MQ=255)
aGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGc < 2:4519704/93‑1 (MQ=255)
aGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGc > 1:4268388/1‑93 (MQ=255)
gCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCa < 1:2758361/93‑1 (MQ=255)
ccATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCAc < 1:717708/93‑1 (MQ=255)
ccATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCAc < 1:1873192/93‑1 (MQ=255)
cATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACt > 1:3756371/1‑93 (MQ=255)
cATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACt > 2:3550797/1‑93 (MQ=255)
cATTGTTGGGGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTTGACGAACCGCAcg > 2:3371182/1‑92 (MQ=255)
tgttgGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCa < 1:529964/93‑1 (MQ=255)
tggtggTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCa < 2:3109947/93‑1 (MQ=255)
ggtggtGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCAt < 2:2561388/93‑1 (MQ=255)
ggtggtGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCAt < 1:561194/93‑1 (MQ=255)
tggtgATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATcc < 2:2737329/93‑1 (MQ=255)
tggtgATTGTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATcc < 1:614328/93‑1 (MQ=255)
ggtgATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCa < 1:2259022/93‑1 (MQ=255)
ggtgATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCa > 2:1721473/1‑93 (MQ=255)
gtgATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAg > 1:2018558/1‑93 (MQ=255)
tgATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAgc > 1:2829302/1‑93 (MQ=255)
tgATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAgc > 2:1937799/1‑93 (MQ=255)
tgATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAgc < 2:1374634/93‑1 (MQ=255)
aTTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAgcgg > 2:958544/1‑93 (MQ=255)
aTTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAgcgg > 1:2682864/1‑93 (MQ=255)
aTTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAgcgg < 1:3597737/93‑1 (MQ=255)
ttCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGt < 1:3442268/93‑1 (MQ=255)
tCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGtt < 1:1702865/93‑1 (MQ=255)
tCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGtt < 1:4161934/93‑1 (MQ=255)
cGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTc < 1:2173820/93‑1 (MQ=255)
cGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTc > 1:662041/1‑93 (MQ=255)
cGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCAGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTc > 1:662040/1‑93 (MQ=255)
gTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTc < 2:1035041/93‑1 (MQ=255)
tCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCt > 2:378035/1‑93 (MQ=255)
tCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCt > 2:2033800/1‑93 (MQ=255)
cacaGCATTCGACCGCCAGCTGAGCACGTACCGCCTATGCCTGATCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGAGGCGTTCGTCtt < 2:4218017/90‑1 (MQ=255)
aaaGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCttt > 1:4016657/1‑93 (MQ=255)
aaaGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCttt > 1:3042390/1‑93 (MQ=255)
aaaGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCttt < 1:235441/93‑1 (MQ=255)
aggCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCCGCGGCGTTCGTCtttt < 2:3130473/91‑1 (MQ=255)
aaGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCtttt < 1:2628330/93‑1 (MQ=255)
gCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCtttttt < 2:3201361/93‑1 (MQ=255)
gCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCtttttt > 2:2456813/1‑93 (MQ=255)
cTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTtct > 2:2585531/1‑93 (MQ=255)
ttCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTtctc > 1:3018953/1‑93 (MQ=255)
tCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTcc > 1:489784/1‑93 (MQ=255)
gAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTccgc < 2:2328618/93‑1 (MQ=255)
aaCGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTccgcc > 1:2694999/1‑93 (MQ=255)
aaCGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTccgcc > 1:458796/1‑93 (MQ=255)
aaCGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTccgcc < 1:895953/93‑1 (MQ=255)
aCGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTccgccg > 2:2118441/1‑93 (MQ=255)
cGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCACACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGt > 2:4538602/1‑93 (MQ=255)
ccAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCg < 1:3779027/93‑1 (MQ=255)
gCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGtt > 1:1589140/1‑93 (MQ=255)
tGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGtttt > 1:1682336/1‑93 (MQ=255)
tGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGtttt > 1:199953/1‑93 (MQ=255)
aGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTgg > 1:1210443/1‑93 (MQ=255)
gCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGgc < 1:895206/93‑1 (MQ=255)
gCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGgc < 2:3483315/93‑1 (MQ=255)
gCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTCgc > 2:1316019/1‑93 (MQ=255)
cACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGgcg < 1:4572031/93‑1 (MQ=255)
aCGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGgcgc > 1:1608847/1‑93 (MQ=255)
cGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGcgcg < 1:1452699/93‑1 (MQ=255)
gTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCGCCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGt < 2:2210335/93‑1 (MQ=255)
tACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTc > 1:3946199/1‑93 (MQ=255)
tACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTc > 1:3797784/1‑93 (MQ=255)
cccGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCa < 2:1164535/92‑1 (MQ=255)
ccGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAg > 2:4386140/1‑93 (MQ=255)
|
CTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGTCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAG > NC_000913/4120043‑4120222
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCCTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGTCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAG > NC_000913/4120041‑4120222
|
GCCTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCC < SRR4302544.4361458/94‑1 (MQ=60)
GCCTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCC < SRR4302544.2053186/94‑1 (MQ=60)
CCTTTCCCCGGGCCAATGACCCCACGATTCCAGCCATTGTTGGTGGTGAGTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCT < SRR4302544.1345157/94‑1 (MQ=60)
CCTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCT > SRR4302544.4789775/1‑94 (MQ=60)
CTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTC > SRR4302544.3090028/1‑94 (MQ=60)
CTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTC < SRR4302544.1616993/94‑1 (MQ=60)
TTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTG < SRR4302544.1461878/94‑1 (MQ=60)
CACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCC > SRR4302544.1686091/1‑94 (MQ=60)
ACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCT < SRR4302544.2631023/94‑1 (MQ=60)
CCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTG < SRR4302544.3273390/94‑1 (MQ=60)
GGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTC < SRR4302544.2388079/94‑1 (MQ=60)
GGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTC > SRR4302544.2285733/1‑94 (MQ=60)
GGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTC > SRR4302544.725875/1‑94 (MQ=60)
GCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCC < SRR4302544.2181368/94‑1 (MQ=60)
CAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGC > SRR4302544.1527904/1‑94 (MQ=60)
CAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGC > SRR4302544.120723/1‑94 (MQ=60)
ATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCACAGCCTTCGAACGCCAGCTGAGCACGTACCGACTCTGCCTGTTCCGCGC > SRR4302544.4329739/1‑94 (MQ=60)
ATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCGTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGC < SRR4302544.665967/94‑1 (MQ=60)
TGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCC < SRR4302544.2960105/94‑1 (MQ=60)
GACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCT < SRR4302544.119416/94‑1 (MQ=60)
GACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCT < SRR4302544.799480/94‑1 (MQ=60)
GACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCT < SRR4302544.1397833/94‑1 (MQ=60)
ACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTC > SRR4302544.342656/1‑94 (MQ=60)
CACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTG < SRR4302544.1927846/94‑1 (MQ=60)
CACACGATACCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTG < SRR4302544.2704063/94‑1 (MQ=60)
CCACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGA < SRR4302544.115759/94‑1 (MQ=60)
CACGATTCTAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAA < SRR4302544.2720566/94‑1 (MQ=60)
CACGATGCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAA < SRR4302544.3409821/94‑1 (MQ=60)
ACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAAC < SRR4302544.839978/94‑1 (MQ=60)
GATTCCAGCCATTGTTGGTGGTGATTTTAGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGA < SRR4302544.789992/94‑1 (MQ=60)
ATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAA < SRR4302544.2467357/94‑1 (MQ=60)
ATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAA > SRR4302544.3203287/1‑94 (MQ=60)
TCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTTCCTGTTCCGCGCCTCTGAACGAACC < SRR4302544.2461590/94‑1 (MQ=60)
TCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACC < SRR4302544.3369251/94‑1 (MQ=60)
TCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACC < SRR4302544.2902479/94‑1 (MQ=60)
CCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGTCTCTGCCTGTTCCGCGCCTCTGAACGAACCG > SRR4302544.2398165/1‑94 (MQ=60)
CAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGC > SRR4302544.4311950/1‑94 (MQ=60)
GCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCAC < SRR4302544.2784901/94‑1 (MQ=60)
GCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCAC > SRR4302544.2091339/1‑94 (MQ=60)
CCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACT > SRR4302544.3793658/1‑94 (MQ=60)
CCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACT < SRR4302544.724794/94‑1 (MQ=60)
CCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACT < SRR4302544.1891294/94‑1 (MQ=60)
CATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTG > SRR4302544.476491/1‑94 (MQ=60)
TGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCAC < SRR4302544.535222/94‑1 (MQ=60)
TGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCAT > SRR4302544.716528/1‑94 (MQ=60)
GGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATC < SRR4302544.566679/94‑1 (MQ=60)
TGGTGATTGTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCA < SRR4302544.620352/94‑1 (MQ=60)
GGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAG > SRR4302544.2038157/1‑94 (MQ=60)
GGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAG < SRR4302544.2280274/94‑1 (MQ=60)
GTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGC > SRR4302544.2856634/1‑94 (MQ=60)
TGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCG > SRR4302544.3140635/1‑94 (MQ=60)
GATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGG > SRR4302544.2708576/1‑94 (MQ=60)
GATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGG < SRR4302544.4314177/94‑1 (MQ=60)
ATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGC < SRR4302544.3632397/94‑1 (MQ=60)
TTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTT < SRR4302544.3475168/94‑1 (MQ=60)
TCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTC < SRR4302544.4203162/94‑1 (MQ=60)
TCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTC < SRR4302544.1719665/94‑1 (MQ=60)
TCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTC > SRR4302544.668584/1‑94 (MQ=60)
TCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCAGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTC > SRR4302544.668583/1‑94 (MQ=60)
CGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCG < SRR4302544.2194421/94‑1 (MQ=60)
AGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTC > SRR4302544.3306889/1‑94 (MQ=60)
GTCAAATCCTTCGAACGCAAGCTGGCCAGGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCT < SRR4302544.2808137/94‑1 (MQ=60)
CAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTT > SRR4302544.3071496/1‑94 (MQ=60)
CAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTT > SRR4302544.4056608/1‑94 (MQ=60)
CAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTT > SRR4302544.2273788/1‑94 (MQ=60)
AAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTT < SRR4302544.237889/94‑1 (MQ=60)
AAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTT < SRR4302544.2653528/94‑1 (MQ=60)
CTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTC > SRR4302544.3803042/1‑94 (MQ=60)
CTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTC > SRR4302544.3047890/1‑94 (MQ=60)
CTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTC > SRR4302544.4474687/1‑94 (MQ=60)
TTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCC > SRR4302544.494589/1‑94 (MQ=60)
TTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCC > SRR4302544.494588/1‑94 (MQ=60)
GAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCC > SRR4302544.1442813/1‑94 (MQ=60)
GAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCC > SRR4302544.2720872/1‑94 (MQ=60)
GAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCC > SRR4302544.463308/1‑94 (MQ=60)
AACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCG < SRR4302544.904814/94‑1 (MQ=60)
CCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGG < SRR4302544.3816461/94‑1 (MQ=60)
AGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTT > SRR4302544.1604815/1‑94 (MQ=60)
AGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGGT > SRR4302544.1604816/1‑94 (MQ=60)
CTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTT > SRR4302544.201978/1‑94 (MQ=60)
CTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTT > SRR4302544.1698908/1‑94 (MQ=60)
CTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTT > SRR4302544.3409708/1‑94 (MQ=60)
TGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTG > SRR4302544.3453513/1‑94 (MQ=60)
GAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGG > SRR4302544.3882443/1‑94 (MQ=60)
GAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGG > SRR4302544.1222427/1‑94 (MQ=60)
GCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCG < SRR4302544.55272/94‑1 (MQ=60)
GCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCG < SRR4302544.904059/94‑1 (MQ=60)
CACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGC < SRR4302544.4617598/94‑1 (MQ=60)
CACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGC > SRR4302544.1624707/1‑94 (MQ=60)
ACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCG > SRR4302544.1780019/1‑94 (MQ=60)
ACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCG < SRR4302544.3716019/94‑1 (MQ=60)
CGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGT < SRR4302544.1467134/94‑1 (MQ=60)
GTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTC > SRR4302544.3985414/1‑94 (MQ=60)
GTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTC > SRR4302544.3835396/1‑94 (MQ=60)
TACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCA > SRR4302544.3048879/1‑94 (MQ=60)
ACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGTGCGTCAG > SRR4302544.406246/1‑94 (MQ=60)
ACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAG < SRR4302544.2576401/94‑1 (MQ=60)
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GCCTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGTCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAG > NC_000913/4120041‑4120222
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
