Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,120,133 |
T→C |
T263A (ACG→GCG) |
ftsN ← |
essential cell division protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,120,133 | 0 | T | C | 100.0%
| 876.8
/ NA
| 271 | T263A (ACG→GCG) | ftsN | essential cell division protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (147/124); total (147/124) |
Only 100 of 284 total aligned reads displayed.
CTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGTCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAG > NC_000913/4120043‑4120222
|
cTTGCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCTAGCTGAGCACGTACCGcct < 1:6476336/93‑1 (MQ=255)
ttCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCctct > 2:894644/1‑93 (MQ=255)
tCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCNAGCTGAGCACGTACCNCCTNTg > 2:5573122/1‑93 (MQ=255)
aCCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGcc < 1:747623/93‑1 (MQ=255)
aCCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGcc > 2:5499526/1‑93 (MQ=255)
aCCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGcc > 2:328239/1‑93 (MQ=255)
cGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTg < 1:5658581/93‑1 (MQ=255)
cGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTg < 2:4810791/93‑1 (MQ=255)
gggCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGt < 2:3490384/93‑1 (MQ=255)
gggCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGt < 2:2436591/93‑1 (MQ=255)
gggCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGt > 1:702512/1‑93 (MQ=255)
ggCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGtt > 2:2014484/1‑93 (MQ=255)
gCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTc > 2:4136867/1‑93 (MQ=255)
gCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTc > 2:3166035/1‑93 (MQ=255)
cAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCcg > 2:2365313/1‑93 (MQ=255)
aaTGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCcgc > 2:257913/1‑93 (MQ=255)
aaTGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCcgc > 1:351633/1‑93 (MQ=255)
aTGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCcgcg < 2:3654189/93‑1 (MQ=255)
aTGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCcgcg > 2:6512224/1‑93 (MQ=255)
aTGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCcgcg > 2:4765464/1‑93 (MQ=255)
gACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGcc < 1:4576027/93‑1 (MQ=255)
gACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGcc < 1:3851727/93‑1 (MQ=255)
aCCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCct < 1:5249247/93‑1 (MQ=255)
aCCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCct < 1:1675280/93‑1 (MQ=255)
ccACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCctc > 1:3796157/1‑93 (MQ=255)
ccACACAATTCCAGCCATTGTTGGTGGTAATTTTCGACTCAAAGCCTTCGAACGCCAGCTGAGCACGTCCCGCCTCTGCCTGTTCCGCGCctc < 2:1106408/93‑1 (MQ=255)
cacaCGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCctct < 2:3007412/93‑1 (MQ=255)
cacaCGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCctct < 1:3367603/93‑1 (MQ=255)
cacaCGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCctct > 2:5732006/1‑93 (MQ=255)
ccacGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTg < 1:4300426/92‑1 (MQ=255)
cGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgcac > 1:1401906/1‑93 (MQ=255)
cGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaac < 1:5480353/93‑1 (MQ=255)
cGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaac < 1:3536663/93‑1 (MQ=255)
gATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTACCGCGCCTCTgaacg < 1:3108491/93‑1 (MQ=255)
aTTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaacga > 1:2977377/1‑93 (MQ=255)
aTTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaacga > 2:2468123/1‑93 (MQ=255)
ttCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaacgaa < 1:2913462/93‑1 (MQ=255)
ttCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTgaacgaa < 2:6234565/93‑1 (MQ=255)
cAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCg > 2:5540343/1‑93 (MQ=255)
cAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCg < 1:5842149/93‑1 (MQ=255)
aGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGc < 2:754764/93‑1 (MQ=255)
gCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCGGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCa > 1:2027039/1‑93 (MQ=255)
ccATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCAc < 1:5293604/93‑1 (MQ=255)
ccATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCAc < 2:4663037/93‑1 (MQ=255)
ccATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCAc < 2:2783187/93‑1 (MQ=255)
ccATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCAc > 2:4530129/1‑93 (MQ=255)
aTTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTg < 2:1231400/93‑1 (MQ=255)
ttgttgGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGc < 1:6142022/93‑1 (MQ=255)
ttgttgGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGc < 1:1582037/93‑1 (MQ=255)
ttgGTGGTGATTTTCGAGTTTTAGTCTTCGAACGCCAGCTGAGCACGTACCGCTTCTGCCTGATCCGCGCCTCTGTATGTACCGCACTGCAcc > 1:6717807/1‑93 (MQ=255)
tggtggTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCa < 2:6338411/93‑1 (MQ=255)
ggtggtGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCAt < 1:4714559/93‑1 (MQ=255)
tggtgATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATcc > 1:5573932/1‑93 (MQ=255)
gtgATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAg > 2:2513874/1‑93 (MQ=255)
gtgATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAg > 2:4929837/1‑93 (MQ=255)
gATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAgcg > 1:257674/1‑93 (MQ=255)
ttCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGt < 1:4542709/93‑1 (MQ=255)
ttCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGt < 1:6579980/93‑1 (MQ=255)
tCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGtt < 2:4216032/93‑1 (MQ=255)
tCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGtt < 2:4084478/93‑1 (MQ=255)
gAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCg < 2:6606044/93‑1 (MQ=255)
gTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTc > 2:2841873/1‑93 (MQ=255)
tCAAAGCCTTCTAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCt > 2:4882295/1‑93 (MQ=255)
tCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTtcttct < 1:1774905/93‑1 (MQ=255)
tCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCt > 2:3769292/1‑93 (MQ=255)
tCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCt < 1:4126453/93‑1 (MQ=255)
cAAAGCCTTCGACCGCCAGGTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGGGTTCGTCtt < 1:1258001/93‑1 (MQ=255)
cAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCtt < 2:3544230/93‑1 (MQ=255)
cAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCtt < 1:3165855/93‑1 (MQ=255)
cAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCtt < 2:5027161/93‑1 (MQ=255)
aaGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCtttt < 2:3253687/93‑1 (MQ=255)
aaGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCtttt > 2:175597/1‑93 (MQ=255)
aGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCttttt < 2:2396637/93‑1 (MQ=255)
aGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCttttt < 1:2721702/93‑1 (MQ=255)
aGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCttttt > 1:91344/1‑93 (MQ=255)
aGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCttttt > 1:6018893/1‑93 (MQ=255)
ttCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCTGCGTTCGTCTTTTTtctc > 1:576104/1‑93 (MQ=255)
ttCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTtctc > 1:4402135/1‑93 (MQ=255)
aaCGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTccgcc > 2:6145648/1‑93 (MQ=255)
aCGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATGCAGCGGCGTTCGTCTTTTTTCTccgccg > 2:6447976/1‑93 (MQ=255)
gCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTc < 1:4945197/93‑1 (MQ=255)
gCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTc < 1:2241667/93‑1 (MQ=255)
cccAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTc < 2:5275060/92‑1 (MQ=255)
cccAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTc < 1:4530893/92‑1 (MQ=255)
ccAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCg > 1:1141519/1‑93 (MQ=255)
ccAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCg > 2:5653471/1‑93 (MQ=255)
cAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCgg < 2:1391490/93‑1 (MQ=255)
cAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCgg < 2:2257067/93‑1 (MQ=255)
aGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGt < 2:2692699/93‑1 (MQ=255)
aGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGt < 2:1836804/93‑1 (MQ=255)
aGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGt > 1:3467975/1‑93 (MQ=255)
aGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGt > 2:4366693/1‑93 (MQ=255)
gCTGAGCCCCTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCTCTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGtt < 1:4608104/93‑1 (MQ=255)
gCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGtt > 2:606492/1‑93 (MQ=255)
tGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGtttt < 2:1030492/93‑1 (MQ=255)
aGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTgg > 2:229523/1‑93 (MQ=255)
aGCACGAACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTCCGTCTTTTTTCTCCGCCGTCGGTTTTgg > 2:2190185/1‑93 (MQ=255)
gTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGt < 2:1685244/93‑1 (MQ=255)
cccGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCa < 1:144012/92‑1 (MQ=255)
ccGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAg > 1:3087970/1‑93 (MQ=255)
|
CTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGTCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAG > NC_000913/4120043‑4120222
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGCCTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGTCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAGCGGC > NC_000913/4120040‑4120226
|
TGCCTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGC > SRR4302536.2961318/1‑94 (MQ=60)
CTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCTAGCTGAGCACGTACCGCCTC < SRR4302536.6669580/94‑1 (MQ=60)
CTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTC > SRR4302536.454324/1‑94 (MQ=60)
CTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTC > SRR4302536.1447756/1‑94 (MQ=60)
CTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTC > SRR4302536.6693676/1‑94 (MQ=60)
CTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTC > SRR4302536.3192626/1‑94 (MQ=60)
CTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTC < SRR4302536.2016056/94‑1 (MQ=60)
CTTGCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCTAGCTGAGCACGTACCGCCTC < SRR4302536.6669581/94‑1 (MQ=60)
TTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTG > SRR4302536.4724437/1‑94 (MQ=60)
TTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTG < SRR4302536.153257/94‑1 (MQ=60)
ACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCT < SRR4302536.1022388/94‑1 (MQ=60)
ACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCT < SRR4302536.769584/94‑1 (MQ=60)
CCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTG < SRR4302536.4691026/94‑1 (MQ=60)
CCGGGCAAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTG < SRR4302536.4900677/94‑1 (MQ=60)
CGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGT < SRR4302536.5826761/94‑1 (MQ=60)
CGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGT > SRR4302536.723031/1‑94 (MQ=60)
GGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTT < SRR4302536.3956686/94‑1 (MQ=60)
GGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTC < SRR4302536.4309153/94‑1 (MQ=60)
GCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCC < SRR4302536.3379778/94‑1 (MQ=60)
CAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGC > SRR4302536.5612658/1‑94 (MQ=60)
CAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGC > SRR4302536.4732979/1‑94 (MQ=60)
CAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGC > SRR4302536.360946/1‑94 (MQ=60)
ATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGC > SRR4302536.842518/1‑94 (MQ=60)
ATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGC > SRR4302536.6308507/1‑94 (MQ=60)
GACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCT < SRR4302536.4713381/94‑1 (MQ=60)
GACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCT < SRR4302536.4665085/94‑1 (MQ=60)
GACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCT < SRR4302536.3966384/94‑1 (MQ=60)
GACCACACGAGACCAGCCATGGTTGGTGGAGATTTTCGAGTCAAACCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCT < SRR4302536.5540656/94‑1 (MQ=60)
ACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTC < SRR4302536.1723865/94‑1 (MQ=60)
ACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTC < SRR4302536.5405667/94‑1 (MQ=60)
ACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTC > SRR4302536.3909380/1‑94 (MQ=60)
ccaccggataCCAGCCATTGTTGGTGGTGATGTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCT < SRR4302536.6497642/84‑1 (MQ=60)
CCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCT < SRR4302536.6229182/94‑1 (MQ=60)
CACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTG < SRR4302536.3467651/94‑1 (MQ=60)
CACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTG > SRR4302536.4342150/1‑94 (MQ=60)
CCACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGA < SRR4302536.4428992/94‑1 (MQ=60)
CACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAA > SRR4302536.2924875/1‑94 (MQ=60)
CACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAA < SRR4302536.4703279/94‑1 (MQ=60)
ACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGCAC > SRR4302536.1443610/1‑94 (MQ=60)
CGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACG < SRR4302536.5643998/94‑1 (MQ=60)
CGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACG < SRR4302536.3642367/94‑1 (MQ=60)
GATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGA > SRR4302536.3065020/1‑94 (MQ=60)
GATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGA < SRR4302536.1477324/94‑1 (MQ=60)
GATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTACCGCGCCTCTGAACGA < SRR4302536.3199253/94‑1 (MQ=60)
ATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAA > SRR4302536.2223655/1‑94 (MQ=60)
TTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAAC < SRR4302536.2999472/94‑1 (MQ=60)
TCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACC < SRR4302536.3032389/94‑1 (MQ=60)
CCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCG > SRR4302536.3892973/1‑94 (MQ=60)
CCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCG > SRR4302536.1358801/1‑94 (MQ=60)
CAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGC < SRR4302536.6016224/94‑1 (MQ=60)
CAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGC > SRR4302536.1661097/1‑94 (MQ=60)
AGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCGGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCA > SRR4302536.2088081/1‑94 (MQ=60)
AGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGATCCGCA > SRR4302536.6922517/1‑94 (MQ=60)
CCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACT < SRR4302536.3079306/94‑1 (MQ=60)
CCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACT < SRR4302536.5451453/94‑1 (MQ=60)
CCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACT > SRR4302536.1553038/1‑94 (MQ=60)
CATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTG > SRR4302536.4829501/1‑94 (MQ=60)
ATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGC > SRR4302536.5841322/1‑94 (MQ=60)
ATTGTTGGTGGTGAGTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGC < SRR4302536.404065/94‑1 (MQ=60)
TTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCA < SRR4302536.1628354/94‑1 (MQ=60)
TTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCA < SRR4302536.6325043/94‑1 (MQ=60)
TTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGACTGTTCCGCGCCTCTGAACGAACCGCACTGCA < SRR4302536.1660798/94‑1 (MQ=60)
GTTGGTGGTGATTTTCGAGTTTTAGTCTTCGAACGCCAGCTGAGCACGTACCGCTTCTGCCTGATCCGCGCCTCTGTATGTACCGCACTGCACC > SRR4302536.6917242/1‑94 (MQ=42)
GGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATC > SRR4302536.5106189/1‑94 (MQ=60)
GGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATC > SRR4302536.3965052/1‑94 (MQ=60)
GGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATC < SRR4302536.4856384/94‑1 (MQ=60)
GTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCC > SRR4302536.5739858/1‑94 (MQ=60)
GGTGATTTTCGCGTCCAAGCCTTCGCACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGCACGCACCGCACTGCACAATCCCG > SRR4302536.3779914/1‑94 (MQ=60)
GGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAG > SRR4302536.5909173/1‑94 (MQ=60)
TGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCG > SRR4302536.264555/1‑94 (MQ=60)
TGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCG < SRR4302536.3672014/94‑1 (MQ=60)
TGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCG > SRR4302536.741056/1‑94 (MQ=60)
TGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCG > SRR4302536.6791306/1‑94 (MQ=60)
ATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGC > SRR4302536.2120476/1‑94 (MQ=60)
ATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGC > SRR4302536.2582535/1‑94 (MQ=60)
ATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGC < SRR4302536.3600074/94‑1 (MQ=60)
ATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGC < SRR4302536.3622833/94‑1 (MQ=60)
TTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTT > SRR4302536.2749595/1‑94 (MQ=60)
TTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTT > SRR4302536.3182856/1‑94 (MQ=60)
TTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTT < SRR4302536.4678924/94‑1 (MQ=60)
TTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTT < SRR4302536.6775774/94‑1 (MQ=60)
TTCGAGTCAAAGCCTTCGAACCCAAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTT < SRR4302536.231308/94‑1 (MQ=60)
TCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTC < SRR4302536.1437262/94‑1 (MQ=60)
GTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCT > SRR4302536.347487/1‑94 (MQ=60)
TCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCTTCTT < SRR4302536.1828588/94‑1 (MQ=60)
TCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTT < SRR4302536.4248779/94‑1 (MQ=60)
CAAAGCCTTCGACCGCCAGGTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGGGTTCGTCTTT < SRR4302536.1295740/94‑1 (MQ=60)
CAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTT < SRR4302536.3258602/94‑1 (MQ=60)
CAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTT > SRR4302536.6860181/1‑94 (MQ=60)
CAAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTT > SRR4302536.5364845/1‑94 (MQ=60)
CAAAGCCTTCGAACGCCAGCTCAGCACCTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGGTCGTCTTT > SRR4302536.5417179/1‑94 (MQ=60)
AAAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTT < SRR4302536.859704/94‑1 (MQ=60)
AAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTT < SRR4302536.573317/94‑1 (MQ=60)
AAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTT > SRR4302536.3494481/1‑94 (MQ=60)
AAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTT > SRR4302536.5941743/1‑94 (MQ=60)
AAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTT > SRR4302536.93776/1‑94 (MQ=60)
AAGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTT > SRR4302536.6198350/1‑94 (MQ=60)
AGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTT < SRR4302536.2802879/94‑1 (MQ=60)
AGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTT > SRR4302536.5611232/1‑94 (MQ=60)
AGCCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTT > SRR4302536.2889646/1‑94 (MQ=60)
CCTTCGAACGCCGGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCTGCGGCGTTCGTCTTTTTTCT < SRR4302536.6731993/94‑1 (MQ=60)
CCTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCT > SRR4302536.3052138/1‑94 (MQ=60)
CTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCTGCGTTCGTCTTTTTTCTC > SRR4302536.590734/1‑94 (MQ=60)
CTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTC > SRR4302536.4533744/1‑94 (MQ=60)
CTTCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTC > SRR4302536.4483807/1‑94 (MQ=60)
TCGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCG > SRR4302536.3394996/1‑94 (MQ=60)
CGAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGC > SRR4302536.5696031/1‑94 (MQ=60)
GAACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCC > SRR4302536.3229269/1‑94 (MQ=60)
AACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGGTCGTCTTTTTTCTCCGCCG > SRR4302536.3205429/1‑94 (MQ=60)
ACGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGT < SRR4302536.952415/94‑1 (MQ=60)
CGCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTC > SRR4302536.4672954/1‑94 (MQ=60)
GCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCG > SRR4302536.1175840/1‑94 (MQ=60)
GCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCG < SRR4302536.2309508/94‑1 (MQ=60)
GCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCG < SRR4302536.5093810/94‑1 (MQ=60)
CCCAGCTGAGCACGTGCCGCCTCTGCCTGTTCCGCGCCTCTGAACAAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCG < SRR4302536.362657/94‑1 (MQ=60)
CCCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCG < SRR4302536.4666711/94‑1 (MQ=60)
CCAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGG > SRR4302536.567060/1‑94 (MQ=60)
CAGCTGAGCCCGGACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGT < SRR4302536.5980636/94‑1 (MQ=60)
CAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGT > SRR4302536.4826608/1‑94 (MQ=60)
CAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGT < SRR4302536.5066980/94‑1 (MQ=60)
CAGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGT > SRR4302536.3571340/1‑94 (MQ=60)
AGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTT > SRR4302536.6120137/1‑94 (MQ=60)
AGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTT > SRR4302536.1778886/1‑94 (MQ=60)
AGCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTT < SRR4302536.4513678/94‑1 (MQ=60)
GCTGAGCCCCTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCTCTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTT < SRR4302536.4746520/94‑1 (MQ=60)
GCTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTT < SRR4302536.3614632/94‑1 (MQ=60)
CTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTT < SRR4302536.5815904/94‑1 (MQ=60)
CTGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTT > SRR4302536.653066/1‑94 (MQ=60)
TGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTG > SRR4302536.4205503/1‑94 (MQ=60)
TGAGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTG > SRR4302536.2722395/1‑94 (MQ=60)
GAGCACGTACCCCCTCTGCCTGTTCCGCCCCTCTGAACGAACCGCACTGCCCCAACCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGG < SRR4302536.4683062/94‑1 (MQ=60)
AGCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGC > SRR4302536.1786296/1‑94 (MQ=60)
GCACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCG > SRR4302536.122282/1‑94 (MQ=60)
ACGTACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCG > SRR4302536.719125/1‑94 (MQ=60)
ACCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAG > SRR4302536.3178272/1‑94 (MQ=60)
CCGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAGC > SRR4302536.6761845/1‑94 (MQ=60)
CGCCTCTGCCTGTTCCGCGCCTCTGAACTAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAGCG < SRR4302536.902409/94‑1 (MQ=60)
CGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAGCG > SRR4302536.5074178/1‑94 (MQ=60)
CGCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAGCG > SRR4302536.5349475/1‑94 (MQ=60)
GCCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAGCGG > SRR4302536.2672723/1‑94 (MQ=60)
CCTCTGCCTGTTCCGCGCCTCTGAACGAACCGGACTGCACCACCCAGCGGCGATCGACTTTTTTCTCCGCCGTCTGTTTTGGCGCGTCAGCTGC > SRR4302536.4102035/1‑94 (MQ=60)
CCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAGCGGC > SRR4302536.3581384/1‑94 (MQ=60)
CCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAGCGGC > SRR4302536.1246979/1‑94 (MQ=60)
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TGCCTTTCACCGGGCCAATGACCACACGATTCCAGCCATTGTTGGTGGTGATTTTCGAGTCAAAGCCTTCGAACGCCAGCTGAGCACGTACCGTCTCTGCCTGTTCCGCGCCTCTGAACGAACCGCACTGCACCATCCAGCGGCGTTCGTCTTTTTTCTCCGCCGTCGGTTTTGGCGCGTCAGCGGC > NC_000913/4120040‑4120226
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
