Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,216,494 |
A→G |
Y107C (TAC→TGC) |
aceK → |
isocitrate dehydrogenase kinase/phosphatase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,216,494 | 0 | A | G | 97.2%
| 437.7
/ ‑1.2
| 145 | Y107C (TAC→TGC) | aceK | isocitrate dehydrogenase kinase/phosphatase |
| Reads supporting (aligned to +/- strand): ref base A (1/3); new base G (70/71); total (71/74) |
| Fisher's exact test for biased strand distribution p-value = 6.20e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 150 total aligned reads displayed.
CATTTTTACTACGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTACTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGC > NC_000913/4216404‑4216585
|
cATTTTTACTACGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCt < 1:3530394/93‑1 (MQ=255)
aTTTTTACTACGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTg < 1:1894617/93‑1 (MQ=255)
tttttACTACGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGTGCTTTTTTAACTCCGTGTGCTgc > 2:3751552/1‑92 (MQ=255)
tttttACTACGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGt > 2:2216651/1‑93 (MQ=255)
tttttACTACGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGt > 1:4085766/1‑93 (MQ=255)
ttttACTACGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTc < 1:1077318/93‑1 (MQ=255)
ttttACTACGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTc < 1:4093299/93‑1 (MQ=255)
ttttACTACGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTc > 1:2249646/1‑93 (MQ=255)
tttACTACGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCg < 2:1675738/93‑1 (MQ=255)
ttACTACGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCgg > 2:3115500/1‑93 (MQ=255)
tactacGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGt > 1:70938/1‑93 (MQ=255)
actacGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGtt < 1:2415351/93‑1 (MQ=255)
ctacGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTa > 2:2336039/1‑93 (MQ=255)
tacGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTAt < 2:2737353/93‑1 (MQ=255)
tacGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTAt > 1:4419268/1‑93 (MQ=255)
acGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTAtt < 2:1607756/93‑1 (MQ=255)
cGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTAttt < 1:2071446/93‑1 (MQ=255)
gtgtTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTg < 1:3856071/93‑1 (MQ=255)
gtgtTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTg > 2:3774240/1‑93 (MQ=255)
tgtTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGa > 1:3905161/1‑93 (MQ=255)
gtTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGac > 2:1949414/1‑93 (MQ=255)
ttAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGacc > 2:3050914/1‑93 (MQ=255)
ttAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGacc < 2:2207931/93‑1 (MQ=255)
aaaGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGaccac < 2:727620/93‑1 (MQ=255)
aaaGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGaccac > 1:3103008/1‑93 (MQ=255)
gagCATTGCCCCCGGCTGTGGCCGTATTCCCCGCTCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACcgc < 2:2116107/93‑1 (MQ=255)
gagCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACcgc > 2:758354/1‑93 (MQ=255)
agCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACcgct < 1:3412341/93‑1 (MQ=255)
agCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGAACACcgct > 2:1879838/1‑93 (MQ=255)
gCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACcgctc > 1:1021999/1‑93 (MQ=255)
gCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACcgctc > 1:1192492/1‑93 (MQ=255)
gCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACcgctc < 1:1413977/93‑1 (MQ=255)
gCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACcgctc < 1:2624852/93‑1 (MQ=255)
cATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACcgctcg > 2:3485445/1‑93 (MQ=255)
cATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACcgctcg < 2:1301309/93‑1 (MQ=255)
aTTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACcgctcgc > 1:2227613/1‑93 (MQ=255)
aTTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACcgctcgc > 1:1107774/1‑93 (MQ=255)
ttACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACcgctcgct > 2:631444/1‑93 (MQ=255)
acacCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTACTGTCGGTTATTTGACCACCGCTCGCTTa < 2:4331049/93‑1 (MQ=255)
cacCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTAc > 2:2118411/1‑93 (MQ=255)
cacCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTAc > 1:3219087/1‑93 (MQ=255)
cacCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTAc > 1:3763221/1‑93 (MQ=255)
acCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACt > 1:4174846/1‑93 (MQ=255)
acCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACt < 2:4625047/93‑1 (MQ=255)
cccGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTc > 2:4237624/1‑93 (MQ=255)
ccGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTcc > 2:93662/1‑93 (MQ=255)
cGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGTTTATTTAACCACCCCTCGCTTACTccc > 1:3031311/1‑93 (MQ=255)
ggCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCg < 1:671726/93‑1 (MQ=255)
ggCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCg < 2:3014814/93‑1 (MQ=255)
ggCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCg < 2:4749701/93‑1 (MQ=255)
gCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGa > 1:2230824/1‑93 (MQ=255)
tGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGc < 1:2099204/93‑1 (MQ=255)
tGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTACTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGc < 2:4630675/93‑1 (MQ=255)
gTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGTTGTCGGTTATTTGACCACCGCTCGCTTTCTCCCGAGCg < 1:4646738/93‑1 (MQ=255)
gTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCg > 1:366027/1‑93 (MQ=255)
tGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGc < 1:145588/93‑1 (MQ=255)
tGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGc < 1:4510841/93‑1 (MQ=255)
gCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCt < 2:3164648/93‑1 (MQ=255)
ccGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCtt < 1:759211/93‑1 (MQ=255)
cgcaTTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCttt < 1:1686017/90‑1 (MQ=255)
cGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCttt < 1:233254/93‑1 (MQ=255)
ggATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCAACGCTCGCTTACTCCCGAGCGGCtgtt > 2:30905/1‑93 (MQ=255)
gATTACCCGCGCTTCGGGATTGCGGAGAGCGTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCATCGCTAGCTTACTCACGAGCGGCttttt > 2:4715453/1‑93 (MQ=255)
tACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATc > 2:156780/1‑93 (MQ=255)
tcccGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCt < 2:1289194/92‑1 (MQ=255)
ccGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCttt > 2:1751684/1‑93 (MQ=255)
gcgcTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAg < 2:3455931/93‑1 (MQ=255)
cgcTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGc < 1:4387341/93‑1 (MQ=255)
gcTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTACTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGct < 1:3992706/93‑1 (MQ=255)
cTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGctc > 1:1052888/1‑93 (MQ=255)
ttCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGctct < 2:1403883/93‑1 (MQ=255)
tCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCtctc > 1:360046/1‑93 (MQ=255)
aTTGCTGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGGCCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCa < 1:1760838/93‑1 (MQ=255)
aTTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCa < 2:3935094/93‑1 (MQ=255)
ttGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCag < 1:2366563/93‑1 (MQ=255)
ttGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCag < 1:291571/93‑1 (MQ=255)
tGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCaga > 2:2774451/1‑93 (MQ=255)
tGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCaga < 2:1883713/93‑1 (MQ=255)
tGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCaga < 2:3922064/93‑1 (MQ=255)
gCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCagag < 1:2826807/93‑1 (MQ=255)
cGGAGAGCTTTTTTACCACCGTGTGCTGTCAGTTATTGGACCACCGCTGGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAgc < 1:3353570/93‑1 (MQ=255)
cGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAgc < 2:943289/93‑1 (MQ=255)
gagaGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAgcgc > 2:2321661/1‑93 (MQ=255)
gagCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGcgccg > 2:3763793/1‑93 (MQ=255)
gagCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCAACGCTCGCTTACTCCCGAGCCGGTTTTTATCTTTAGCTCTCAGCCCGAGcgccg > 2:3517725/1‑93 (MQ=255)
agCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGcgccgc > 2:2494620/1‑93 (MQ=255)
gCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCt > 1:459598/1‑93 (MQ=255)
cTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCtt < 1:3547782/93‑1 (MQ=255)
ttttttAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCttt > 2:1978983/1‑93 (MQ=255)
ttttttAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCttt > 1:2651388/1‑93 (MQ=255)
ttttttAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCttt > 2:901704/1‑93 (MQ=255)
tttttAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTc < 1:1617645/93‑1 (MQ=255)
ttAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTa > 2:301435/1‑93 (MQ=255)
aaCTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTAcc < 1:4676643/93‑1 (MQ=255)
aaCTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTAcc > 1:1224793/1‑93 (MQ=255)
cTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCAt < 1:1886420/93‑1 (MQ=255)
tCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCAtt > 1:2712055/1‑93 (MQ=255)
tCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCAtt > 2:2645035/1‑93 (MQ=255)
tCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCAtt > 1:1527980/1‑93 (MQ=255)
gtgtGCTGTCTGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTccc > 1:3568418/1‑93 (MQ=255)
|
CATTTTTACTACGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTACTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGC > NC_000913/4216404‑4216585
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGGCATTTTTACTACGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTACTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCC > NC_000913/4216401‑4216587
|
CGGTATTTTTACTACGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTG < SRR4302544.2037791/94‑1 (MQ=60)
cagttgtactgcgtggtaaagaggcttgCACCCGGCTGGTTCCGGATTGCCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTG < SRR4302544.3564155/66‑1 (MQ=60)
CATTTTTACTACGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTG < SRR4302544.3564156/94‑1 (MQ=60)
ATTTTTACTACGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGT > SRR4302544.4126403/1‑94 (MQ=60)
ATTTTTACTACGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGT < SRR4302544.1912926/94‑1 (MQ=60)
TTTTTACTACGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTC > SRR4302544.2270788/1‑94 (MQ=60)
TTTTTACTACGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTC > SRR4302544.2270787/1‑94 (MQ=60)
TTTTACTCCGTGTTCAAGCGCATTACTCCCTGCTGTTTCCGGATTTCCCGCGCTTCGAGATTGCGGAGACCTTTTTTAACTCCGTGTGCTGTCG < SRR4302544.4134022/94‑1 (MQ=53)
TTTTACTACGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCG < SRR4302544.1088029/94‑1 (MQ=60)
TTTTACTACGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCG < SRR4302544.4134023/94‑1 (MQ=60)
TTTACTACGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGG > SRR4302544.1508092/1‑94 (MQ=60)
TTACTACGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGT > SRR4302544.71629/1‑94 (MQ=60)
ACTACGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTA < SRR4302544.2438336/94‑1 (MQ=60)
CTACGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTAT > SRR4302544.2147434/1‑94 (MQ=60)
CTACGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTAT > SRR4302544.4463865/1‑94 (MQ=60)
CGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTG < SRR4302544.2091350/94‑1 (MQ=60)
CGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTG < SRR4302544.3998654/94‑1 (MQ=60)
GTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGA > SRR4302544.3943961/1‑94 (MQ=60)
GTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGA < SRR4302544.3894352/94‑1 (MQ=60)
TAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCAC > SRR4302544.3132540/1‑94 (MQ=60)
AAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCG < SRR4302544.3841146/94‑1 (MQ=60)
AGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTC > SRR4302544.1032205/1‑94 (MQ=60)
AGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTC < SRR4302544.3444954/94‑1 (MQ=60)
AGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTC > SRR4302544.1204320/1‑94 (MQ=60)
GCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCG < SRR4302544.2650022/94‑1 (MQ=60)
GCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCG < SRR4302544.1428059/94‑1 (MQ=60)
GCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCG < SRR4302544.745912/94‑1 (MQ=60)
CATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGC > SRR4302544.2248578/1‑94 (MQ=60)
CATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGC > SRR4302544.1118818/1‑94 (MQ=60)
ATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCT > SRR4302544.1643036/1‑94 (MQ=60)
TCACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTAC < SRR4302544.1186426/94‑1 (MQ=60)
ACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTAC > SRR4302544.3800563/1‑94 (MQ=60)
ACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTAC > SRR4302544.3249798/1‑94 (MQ=60)
CACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACT > SRR4302544.4216198/1‑94 (MQ=60)
CCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGTTTATTTAACCACCCCTCGCTTACTCCC > SRR4302544.3060354/1‑94 (MQ=60)
CCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCC > SRR4302544.3060355/1‑94 (MQ=60)
CGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCG < SRR4302544.2479712/94‑1 (MQ=60)
GGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGA > SRR4302544.2251804/1‑94 (MQ=60)
GGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGA < SRR4302544.678363/94‑1 (MQ=60)
TGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCG < SRR4302544.2119403/94‑1 (MQ=60)
TGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCG > SRR4302544.369769/1‑94 (MQ=60)
GTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGTTGTCGGTTATTTGACCACCGCTCGCTTTCTCCCGAGCGG < SRR4302544.4692742/94‑1 (MQ=60)
TGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCT < SRR4302544.4556052/94‑1 (MQ=60)
TGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCT < SRR4302544.146977/94‑1 (MQ=60)
CCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTT > SRR4302544.3513943/1‑94 (MQ=60)
CCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTT < SRR4302544.766618/94‑1 (MQ=60)
CGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTT < SRR4302544.235683/94‑1 (MQ=60)
CGCATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTT < SRR4302544.1702637/94‑1 (MQ=60)
GATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTA < SRR4302544.4498754/94‑1 (MQ=60)
ATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTAT < SRR4302544.3379870/94‑1 (MQ=60)
ATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTAGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTAT < SRR4302544.2899915/94‑1 (MQ=60)
CCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTT < SRR4302544.1083826/94‑1 (MQ=60)
CGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAG > SRR4302544.4644357/1‑94 (MQ=60)
CGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCT < SRR4302544.4431759/94‑1 (MQ=60)
GCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTC > SRR4302544.1063330/1‑94 (MQ=60)
GCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTACTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTC < SRR4302544.4032449/94‑1 (MQ=60)
TTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTC > SRR4302544.363731/1‑94 (MQ=60)
TTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTC < SRR4302544.4773835/94‑1 (MQ=60)
ATTGCTGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGGCCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAG < SRR4302544.1778067/94‑1 (MQ=60)
ATTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAG > SRR4302544.4344401/1‑94 (MQ=60)
TTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGA < SRR4302544.2388954/94‑1 (MQ=60)
TTGCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGA < SRR4302544.294591/94‑1 (MQ=60)
GCGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGC < SRR4302544.2854121/94‑1 (MQ=60)
CGGAGAGCTTTTTTACCACCGTGTGCTGTCAGTTATTGGACCACCGCTGGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCG < SRR4302544.3385572/94‑1 (MQ=60)
CGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCG > SRR4302544.2057055/1‑94 (MQ=60)
CGGAGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCG < SRR4302544.1804032/94‑1 (MQ=60)
AGAGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCG > SRR4302544.1404180/1‑94 (MQ=60)
AGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCT < SRR4302544.3658893/94‑1 (MQ=60)
AGCTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCT > SRR4302544.464118/1‑94 (MQ=60)
CTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTT < SRR4302544.3581757/94‑1 (MQ=60)
CTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTT > SRR4302544.2676814/1‑94 (MQ=60)
CTTTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTT < SRR4302544.3581758/94‑1 (MQ=60)
TTTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCG < SRR4302544.1633589/94‑1 (MQ=60)
TTTTAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGT < SRR4302544.2734522/94‑1 (MQ=60)
TAACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACC > SRR4302544.1236906/1‑94 (MQ=60)
AACTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCA < SRR4302544.4722867/94‑1 (MQ=60)
CTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATT < SRR4302544.1904650/94‑1 (MQ=60)
CTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATT > SRR4302544.1543155/1‑94 (MQ=60)
CTCCGTGTGCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATT > SRR4302544.2738143/1‑94 (MQ=60)
CGTGTGCTGTCTGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCC > SRR4302544.3602634/1‑94 (MQ=60)
GTACTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGC > SRR4302544.2381634/1‑94 (MQ=60)
TCTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCC < SRR4302544.3091826/94‑1 (MQ=60)
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CGGCATTTTTACTACGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTACTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCC > NC_000913/4216401‑4216587
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
