Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,756,526 |
A→G |
V75A (GTG→GCG) |
ynhG ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,756,526 | 0 | A | G | 100.0%
| 729.9
/ NA
| 225 | V75A (GTG→GCG) | ynhG | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (127/98); total (127/98) |
Only 100 of 232 total aligned reads displayed.
AGCTCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCACCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCCCTTCT > NC_000913/1756436‑1756615
|
ctctGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCgg < 1:3978025/93‑1 (MQ=255)
ctctGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCgg < 1:344208/93‑1 (MQ=255)
tctGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCggg < 1:4926064/93‑1 (MQ=255)
ctGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCgggg > 1:4785585/1‑93 (MQ=255)
ctGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCgggg > 1:6328343/1‑93 (MQ=255)
ctGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCgggg > 1:4304052/1‑93 (MQ=255)
ctGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCgggg > 1:98800/1‑93 (MQ=255)
ctGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCgggg > 2:1011002/1‑93 (MQ=255)
ctGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCgggg > 1:3098942/1‑93 (MQ=255)
tGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGc < 2:392194/93‑1 (MQ=255)
gCAAGGGTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGACGGAATAGTTATCGTCGTACCAGGTTTTCGCGCCGGGGCg > 1:5021238/1‑93 (MQ=255)
aaGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGAt > 1:325800/1‑93 (MQ=255)
aGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATa > 2:1896668/1‑93 (MQ=255)
aGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATa < 1:6299569/93‑1 (MQ=255)
aGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATa > 1:2280247/1‑93 (MQ=255)
ggTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAg > 1:6419697/1‑93 (MQ=255)
tAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAgtgt < 1:5936007/93‑1 (MQ=255)
tAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAgtgt > 1:1130789/1‑93 (MQ=255)
aaCGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGtt < 1:5424970/93‑1 (MQ=255)
aaCGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGAGCCGGGGCGATAGTGtt > 1:3623840/1‑93 (MQ=255)
gATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACTAGGTTTTGGCGCCGGGGCGATAGTGTTAtt < 1:1945417/93‑1 (MQ=255)
gATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTAtt > 1:2560862/1‑93 (MQ=255)
gATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTAtt < 2:679059/93‑1 (MQ=255)
gATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTAtt < 1:5265874/93‑1 (MQ=255)
aTAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTg > 1:3833401/1‑93 (MQ=255)
aTAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTg < 1:2264195/93‑1 (MQ=255)
aaTCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGc < 2:3823363/93‑1 (MQ=255)
aaTCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGc < 2:2693554/93‑1 (MQ=255)
tCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCtt > 2:2034313/1‑93 (MQ=255)
ccccTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTc < 1:4086986/93‑1 (MQ=255)
ccccTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTc > 1:4096500/1‑93 (MQ=255)
ccccTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTc < 1:892415/93‑1 (MQ=255)
ccccTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTc > 2:2884207/1‑93 (MQ=255)
ccccTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTc > 2:2785295/1‑93 (MQ=255)
ccTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCaa < 1:655273/93‑1 (MQ=255)
cTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAg > 1:2564338/1‑93 (MQ=255)
cTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAg < 1:6124722/93‑1 (MQ=255)
cTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAg > 2:6124722/1‑93 (MQ=255)
tGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAgg > 1:1486106/1‑93 (MQ=255)
gACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGa > 2:299824/1‑93 (MQ=255)
cgcgGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATc > 2:2250542/1‑93 (MQ=255)
cgcgGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATc > 1:4423526/1‑93 (MQ=255)
gcgGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGCTCa > 1:1546576/1‑93 (MQ=255)
cATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTg < 1:5908789/93‑1 (MQ=255)
aTCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGc < 2:372314/93‑1 (MQ=255)
aTCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGc < 2:5886925/93‑1 (MQ=255)
tCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGcc > 2:5464162/1‑93 (MQ=255)
cAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCg < 1:2908979/93‑1 (MQ=255)
aGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGc > 2:4002355/1‑93 (MQ=255)
aGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGc > 2:4084785/1‑93 (MQ=255)
ggTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCa < 2:529896/93‑1 (MQ=255)
taataaCAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGt > 2:3368523/1‑93 (MQ=255)
aataaCAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTa < 2:6370025/93‑1 (MQ=255)
ataaCAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGCTAGTGTTATTGGCTTCAAGGCTCAACATTGCCGCAGTAt > 2:5769801/1‑93 (MQ=255)
ataaCAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTAt > 1:5863376/1‑93 (MQ=255)
taaCAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATc > 2:4143517/1‑93 (MQ=255)
taaCAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATc > 1:4600906/1‑93 (MQ=255)
taaCAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATc > 1:4666630/1‑93 (MQ=255)
aaCAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCa > 2:6573558/1‑93 (MQ=255)
aCAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCaa > 1:6331228/1‑93 (MQ=255)
aCAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCaa > 1:432113/1‑93 (MQ=255)
aCAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCaa < 2:1441573/93‑1 (MQ=255)
gTTGTGAATGAATAGTGATCGTCGTACCAGGTTTTGGCGCCGAGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAAc < 2:3171366/93‑1 (MQ=255)
gTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAAc > 2:5147566/1‑93 (MQ=255)
ttGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACg < 1:1528406/93‑1 (MQ=255)
ttGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACg > 2:3394952/1‑93 (MQ=255)
gtgAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTc > 2:835299/1‑93 (MQ=255)
tgAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCg < 2:6521960/93‑1 (MQ=255)
tgAAGGAATAGTTATCGTCGTACCAGGTTGTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCg < 1:3236102/93‑1 (MQ=255)
aaTAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAAt < 2:5371230/93‑1 (MQ=255)
aTAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATa > 2:426361/1‑93 (MQ=255)
tAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAg > 2:4940517/1‑93 (MQ=255)
aGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGc < 1:618082/93‑1 (MQ=255)
gTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGcc > 2:1496314/1‑93 (MQ=255)
ttATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCt < 1:6050120/93‑1 (MQ=255)
tATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTg > 2:1561502/1‑93 (MQ=255)
gtcgtACCAGGTTTTGGCGCCGGGGCGATAGGGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAgg > 1:3432258/1‑93 (MQ=255)
tcgtACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGt > 1:2510852/1‑93 (MQ=255)
tcgtACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGt > 2:6679235/1‑93 (MQ=255)
tcgtACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGt > 1:4947029/1‑93 (MQ=255)
tcgtACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGt > 1:508515/1‑93 (MQ=255)
cgtACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGtt < 1:4085084/93‑1 (MQ=255)
gtACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGttt < 2:4893442/93‑1 (MQ=255)
aCCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGttttt > 1:2417264/1‑93 (MQ=255)
aCCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGttttt > 2:4820483/1‑93 (MQ=255)
aCCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGttttt < 1:4696240/93‑1 (MQ=255)
ccAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTa < 2:2172795/93‑1 (MQ=255)
ccAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTa > 2:2549124/1‑93 (MQ=255)
ccAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTa > 1:1735609/1‑93 (MQ=255)
cAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTAt > 1:8033/1‑93 (MQ=255)
cAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTAt > 1:2822425/1‑93 (MQ=255)
ggTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATcc < 1:4813493/93‑1 (MQ=255)
ggTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATcc > 2:6168925/1‑93 (MQ=255)
ttttGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATcccc < 1:3196549/93‑1 (MQ=255)
tttGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCCct < 1:1922585/93‑1 (MQ=255)
tttGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCCct < 1:5378795/93‑1 (MQ=255)
tttGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCCct > 1:3383100/1‑93 (MQ=255)
tGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCCcttc < 1:3799372/93‑1 (MQ=255)
tGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCCcttc < 2:5784944/93‑1 (MQ=255)
ggCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCCcttct > 2:1213347/1‑93 (MQ=255)
|
AGCTCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCACCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCCCTTCT > NC_000913/1756436‑1756615
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGCAGCTCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCACCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCCCTTCTTGCA > NC_000913/1756433‑1756619
|
CGCAGCTCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCG > SRR4302536.1955296/1‑94 (MQ=60)
AGCTCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCG > SRR4302536.629209/1‑94 (MQ=60)
CTCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGG < SRR4302536.4096126/94‑1 (MQ=60)
CTCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGG > SRR4302536.4688283/1‑94 (MQ=60)
CTCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGG < SRR4302536.353333/94‑1 (MQ=60)
CTCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGG < SRR4302536.2640338/94‑1 (MQ=60)
TCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGG > SRR4302536.101428/1‑94 (MQ=60)
TCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGG > SRR4302536.4432760/1‑94 (MQ=60)
TCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGG > SRR4302536.4929661/1‑94 (MQ=60)
TCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGG < SRR4302536.5074079/94‑1 (MQ=60)
TCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGG > SRR4302536.3189440/1‑94 (MQ=60)
TCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGG > SRR4302536.6516817/1‑94 (MQ=60)
CTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGC > SRR4302536.3479071/1‑94 (MQ=60)
TGCAAGGGTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGACGGAATAGTTATCGTCGTACCAGGTTTTCGCGCCGGGGCG > SRR4302536.5171750/1‑94 (MQ=60)
CAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGAT > SRR4302536.334441/1‑94 (MQ=60)
CAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGAT > SRR4302536.3333711/1‑94 (MQ=60)
AAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATA < SRR4302536.6773067/94‑1 (MQ=60)
AAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATA > SRR4302536.2349387/1‑94 (MQ=60)
AAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATA > SRR4302536.6614626/1‑94 (MQ=60)
AAGGTTAACGATAATCCCCTGACGCGGGGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATG > SRR4302536.5171573/1‑94 (MQ=60)
AGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGCTAG > SRR4302536.5815102/1‑94 (MQ=60)
AGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAG < SRR4302536.6487231/94‑1 (MQ=60)
AGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAG > SRR4302536.6611554/1‑94 (MQ=60)
AGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAG < SRR4302536.4859182/94‑1 (MQ=60)
AGGTTAACGATAATCCCCTGACGCCGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGGTAG > SRR4302536.5531124/1‑94 (MQ=60)
GGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGT < SRR4302536.3534593/94‑1 (MQ=60)
TTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGT > SRR4302536.1164772/1‑94 (MQ=60)
TTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGT < SRR4302536.6222782/94‑1 (MQ=60)
TAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTT < SRR4302536.6112819/94‑1 (MQ=60)
TAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGAGCCGGGGCGATAGTGTT > SRR4302536.3732201/1‑94 (MQ=60)
AACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTA < SRR4302536.5587148/94‑1 (MQ=60)
AACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTA > SRR4302536.518912/1‑94 (MQ=60)
AACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTA < SRR4302536.3513710/94‑1 (MQ=60)
CGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATT > SRR4302536.2637934/1‑94 (MQ=60)
GATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACTAGGTTTTGGCGCCGGGGCGATAGTGTTATTG < SRR4302536.2003925/94‑1 (MQ=60)
GATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTG > SRR4302536.3947562/1‑94 (MQ=60)
GATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTG < SRR4302536.5422812/94‑1 (MQ=60)
GATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTG < SRR4302536.2321205/94‑1 (MQ=60)
ATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGG > SRR4302536.3479947/1‑94 (MQ=60)
ATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGG > SRR4302536.6378865/1‑94 (MQ=60)
ATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGG < SRR4302536.2332780/94‑1 (MQ=60)
AATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCT > SRR4302536.6486411/1‑94 (MQ=60)
ATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTT > SRR4302536.3965608/1‑94 (MQ=60)
AGCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTT < SRR4302536.1999542/94‑1 (MQ=60)
TCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTC > SRR4302536.4217966/1‑94 (MQ=60)
CCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCA < SRR4302536.918702/94‑1 (MQ=60)
CCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCA > SRR4302536.552993/1‑94 (MQ=60)
CCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCA > SRR4302536.5993263/1‑94 (MQ=60)
CCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCA < SRR4302536.4208171/94‑1 (MQ=60)
CCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCA < SRR4302536.4208170/94‑1 (MQ=60)
CCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAG > SRR4302536.1827604/1‑94 (MQ=60)
CCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAG < SRR4302536.674480/94‑1 (MQ=60)
CCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAG > SRR4302536.2641494/1‑94 (MQ=60)
CCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGGTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCTAG > SRR4302536.4878169/1‑94 (MQ=60)
CTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGG > SRR4302536.1530005/1‑94 (MQ=60)
CTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGG > SRR4302536.3637654/1‑94 (MQ=60)
CTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGG < SRR4302536.6307257/94‑1 (MQ=60)
CTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGG < SRR4302536.1784813/94‑1 (MQ=60)
TGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGA < SRR4302536.6228329/94‑1 (MQ=60)
ACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATC > SRR4302536.4556012/1‑94 (MQ=60)
ACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATC < SRR4302536.2374129/94‑1 (MQ=60)
CGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGCTCA > SRR4302536.1592027/1‑94 (MQ=60)
CGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCA < SRR4302536.158429/94‑1 (MQ=60)
GGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACA > SRR4302536.1019198/1‑94 (MQ=60)
TGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATT < SRR4302536.6095066/94‑1 (MQ=60)
TGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATT < SRR4302536.2839743/94‑1 (MQ=60)
CATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGC < SRR4302536.6084784/94‑1 (MQ=60)
CAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGC < SRR4302536.4948793/94‑1 (MQ=60)
CAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGC < SRR4302536.2994841/94‑1 (MQ=60)
AGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCA < SRR4302536.2505439/94‑1 (MQ=60)
GTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGT > SRR4302536.658596/1‑94 (MQ=60)
AATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTAT > SRR4302536.6038052/1‑94 (MQ=60)
AATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTAT > SRR4302536.4206363/1‑94 (MQ=60)
AATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGGAT > SRR4302536.942048/1‑94 (MQ=60)
ATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATC < SRR4302536.3891829/94‑1 (MQ=60)
ATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATC > SRR4302536.4739081/1‑94 (MQ=60)
ATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATC > SRR4302536.4806945/1‑94 (MQ=60)
AACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAA > SRR4302536.443479/1‑94 (MQ=60)
AACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAA > SRR4302536.6519783/1‑94 (MQ=60)
AGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAAC < SRR4302536.4125763/94‑1 (MQ=60)
AGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAAC > SRR4302536.2180456/1‑94 (MQ=60)
AGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAAC < SRR4302536.3650040/94‑1 (MQ=60)
GTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACG < SRR4302536.4430674/94‑1 (MQ=60)
TTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGT < SRR4302536.1573377/94‑1 (MQ=60)
TGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTC > SRR4302536.3257998/1‑94 (MQ=60)
GTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCG > SRR4302536.2909976/1‑94 (MQ=60)
TGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGG < SRR4302536.3081507/94‑1 (MQ=60)
TGAAGGAATAGTTATCGTCGTACCAGGTTGTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGG < SRR4302536.3330963/94‑1 (MQ=60)
AGGAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCA > SRR4302536.6350919/1‑94 (MQ=60)
GAATAGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAAT < SRR4302536.2629135/94‑1 (MQ=60)
AGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCC < SRR4302536.2659144/94‑1 (MQ=60)
AGTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCC < SRR4302536.636472/94‑1 (MQ=60)
GTTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCT > SRR4302536.3300560/1‑94 (MQ=60)
TTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTG < SRR4302536.651764/94‑1 (MQ=60)
TTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTG < SRR4302536.6230570/94‑1 (MQ=60)
TTATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTG < SRR4302536.4645872/94‑1 (MQ=60)
TATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTTAAGGATCAACATTGCCGCAGTATCCAAACGTCGGGCAATAGCCTGA > SRR4302536.4814231/1‑94 (MQ=60)
TATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGA > SRR4302536.5090051/1‑94 (MQ=60)
ATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAA > SRR4302536.4085106/1‑94 (MQ=60)
ATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAA > SRR4302536.1573236/1‑94 (MQ=60)
ATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAA > SRR4302536.4743434/1‑94 (MQ=60)
ATCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAA > SRR4302536.893205/1‑94 (MQ=60)
TCGTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAG < SRR4302536.673251/94‑1 (MQ=60)
CGTCGTACCAGGTTTTGGCGCCGGGGCGATAGGGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGG > SRR4302536.3534422/1‑94 (MQ=60)
GTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGT > SRR4302536.521558/1‑94 (MQ=60)
GTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGT > SRR4302536.5095679/1‑94 (MQ=60)
GTCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGT > SRR4302536.2586563/1‑94 (MQ=60)
TCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTT < SRR4302536.5059081/94‑1 (MQ=60)
TCGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGCT > SRR4302536.4443390/1‑94 (MQ=60)
CGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTT < SRR4302536.4206194/94‑1 (MQ=60)
CGTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTT < SRR4302536.5250164/94‑1 (MQ=60)
GTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTT > SRR4302536.2525942/1‑94 (MQ=60)
GTACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTT > SRR4302536.327598/1‑94 (MQ=60)
TACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTT > SRR4302536.130360/1‑94 (MQ=60)
TACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTT < SRR4302536.6078398/94‑1 (MQ=60)
TACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTT < SRR4302536.650330/94‑1 (MQ=60)
TACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTT > SRR4302536.2490383/1‑94 (MQ=60)
TACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTT < SRR4302536.2335427/94‑1 (MQ=60)
ACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTA > SRR4302536.1785667/1‑94 (MQ=60)
ACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTA < SRR4302536.951821/94‑1 (MQ=60)
ACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTA < SRR4302536.4837456/94‑1 (MQ=60)
ACCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGGTTTTA > SRR4302536.3922437/1‑94 (MQ=60)
CCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTAT > SRR4302536.8256/1‑94 (MQ=60)
CCAGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTAT > SRR4302536.2906009/1‑94 (MQ=60)
AGGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCC < SRR4302536.4238441/94‑1 (MQ=60)
GGTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCC < SRR4302536.4958324/94‑1 (MQ=60)
GTTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCCC < SRR4302536.4501668/94‑1 (MQ=60)
TTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCCCT < SRR4302536.3290249/94‑1 (MQ=60)
TTTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCCCT > SRR4302536.3483653/1‑94 (MQ=60)
TTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCCCTT < SRR4302536.1980414/94‑1 (MQ=60)
TTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCCCTT < SRR4302536.5539275/94‑1 (MQ=60)
TTTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCCCTT < SRR4302536.1595493/94‑1 (MQ=60)
TTGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCCCTTC > SRR4302536.5422453/1‑94 (MQ=60)
TGGCGCCGGGGCGATAGTGTTATTGGCTTTCAGGATCAACATTGCCGCAGTATCAAAACGTCGGTCAATAGGCTGAAAGTTTATATCAACTTCT > SRR4302536.1646741/1‑94 (MQ=60)
TGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCCCTTCT < SRR4302536.3912676/94‑1 (MQ=60)
TGGCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCCCTTCT < SRR4302536.5095549/94‑1 (MQ=60)
GCGCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCCCTTCTTG < SRR4302536.2614368/94‑1 (MQ=60)
GCCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCCCTTCTTGCA > SRR4302536.5999530/1‑94 (MQ=60)
|
CGCAGCTCTGCAAGGTTAACGATAATCCCCTGACGCGGTGCATCAGGTAATAACAGTTGTGAAGGAATAGTTATCGTCGTACCAGGTTTTGGCACCGGGGCGATAGTGTTATTGGCTTCAAGGATCAACATTGCCGCAGTATCAAAACGTCGGGCAATAGCCTGAAGGTTTTTATCCCCTTCTTGCA > NC_000913/1756433‑1756619
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
