Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,788,045 |
A→G |
S408S (AGT→AGC) |
b1706 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,788,045 | 0 | A | G | 100.0%
| 735.4
/ NA
| 225 | S408S (AGT→AGC) | b1706 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (108/117); total (108/117) |
Only 100 of 231 total aligned reads displayed.
CCCTTTTCTGCCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCACTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACTCATCACGTAG > NC_000913/1787956‑1788134
|
cccTTTTCTGCCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTa > 1:4424535/1‑93 (MQ=255)
ccTTTTCTGCCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTAt > 2:3643497/1‑93 (MQ=255)
ccTTTTCTGCCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTAt < 1:5485691/93‑1 (MQ=255)
cTTTTCTGCCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATc > 2:1306134/1‑93 (MQ=255)
cTTTTCTGCCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATc > 1:303942/1‑93 (MQ=255)
tttCTGCCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGc < 2:5230510/93‑1 (MQ=255)
tttCTGCCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGc < 2:105165/93‑1 (MQ=255)
cTGCCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTaa < 1:691373/93‑1 (MQ=255)
tGCCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAAc > 2:450299/1‑93 (MQ=255)
tGCCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAAc < 2:5174844/93‑1 (MQ=255)
gCCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAAcc < 1:4482965/93‑1 (MQ=255)
ccGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCt < 1:683304/93‑1 (MQ=255)
ccGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCt < 1:247519/93‑1 (MQ=255)
ccGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCt < 1:1150220/93‑1 (MQ=255)
ccGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCt < 2:4491961/93‑1 (MQ=255)
ccGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCt < 1:1367407/93‑1 (MQ=255)
cTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGt < 2:1752967/93‑1 (MQ=255)
ttCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTc < 2:2827708/93‑1 (MQ=255)
tCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCt < 1:5906375/93‑1 (MQ=255)
tCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCt < 2:1379713/93‑1 (MQ=255)
tCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCt > 2:5131657/1‑93 (MQ=255)
cAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCtt < 2:4175536/93‑1 (MQ=255)
tCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCttgtt > 1:2559202/1‑93 (MQ=255)
tCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCttgtt < 1:4558156/93‑1 (MQ=255)
tCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCttgtt < 1:4954299/93‑1 (MQ=255)
tCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTGGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCttgtt < 2:3561873/93‑1 (MQ=255)
cGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCttgttg > 2:4743314/1‑93 (MQ=255)
gCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGc > 2:3079021/1‑93 (MQ=255)
cccGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCa < 1:1288656/93‑1 (MQ=255)
ccGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCaa > 2:2544153/1‑93 (MQ=255)
ccGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCaa > 1:2268207/1‑93 (MQ=255)
ccGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCaa < 1:4034888/93‑1 (MQ=255)
cGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCaaa < 1:1453346/93‑1 (MQ=255)
gTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAAc > 1:1803764/1‑93 (MQ=255)
gTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAAc < 2:2917548/93‑1 (MQ=255)
gcgcCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGcc > 2:574287/1‑93 (MQ=255)
gcgcCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGcc < 1:4310302/93‑1 (MQ=255)
ccAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGccccc > 1:3895995/1‑93 (MQ=255)
aCCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGAt > 2:6208485/1‑93 (MQ=255)
aCCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGAt < 2:738328/93‑1 (MQ=255)
ccAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATa > 1:390630/1‑93 (MQ=255)
ccAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATa < 2:2329501/93‑1 (MQ=255)
cAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATaa < 2:4407028/93‑1 (MQ=255)
ttGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACgg < 1:4774915/93‑1 (MQ=255)
gcgcAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGc < 2:2058304/93‑1 (MQ=255)
cgcAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCa < 1:3463448/93‑1 (MQ=255)
cAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCaaa < 2:1548164/93‑1 (MQ=255)
cAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCACGATAACGGGCaac > 1:6675335/1‑92 (MQ=255)
tACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCa > 2:3141218/1‑93 (MQ=255)
aCCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAg > 1:4228079/1‑93 (MQ=255)
aCCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAg < 1:6153617/93‑1 (MQ=255)
ccAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGt < 1:655622/93‑1 (MQ=255)
cAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGtc < 1:6333318/93‑1 (MQ=255)
cAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGtc < 2:6429271/93‑1 (MQ=255)
gagCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGtcat > 1:870500/1‑93 (MQ=255)
gagCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGtcat < 1:5307498/93‑1 (MQ=255)
agCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGtcatc > 2:3264015/1‑93 (MQ=255)
gCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGtcatca > 2:5516712/1‑93 (MQ=255)
ggggTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCaaa > 2:3917490/1‑93 (MQ=255)
ggggTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCaaa < 2:6377068/93‑1 (MQ=255)
ggggTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCaaa < 1:1987156/93‑1 (MQ=255)
ggggTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCaaa > 1:280186/1‑93 (MQ=255)
ggggTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCaaa < 2:5014560/93‑1 (MQ=255)
gggTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAAt < 2:2648661/93‑1 (MQ=255)
gggTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAAt < 2:4778739/93‑1 (MQ=255)
ttAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCTCCCGATaa > 2:5821093/1‑69 (MQ=255)
ttAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATaa < 1:5821093/69‑1 (MQ=255)
aaCGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGc < 2:3064796/93‑1 (MQ=255)
aaCGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGc > 2:3350345/1‑93 (MQ=255)
aaCGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGc < 2:1504600/93‑1 (MQ=255)
aaCGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTACAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGc < 2:3570925/93‑1 (MQ=255)
aCGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCa > 2:197889/1‑93 (MQ=255)
cGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCAc > 2:1795633/1‑93 (MQ=255)
cGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCAc < 1:1930108/93‑1 (MQ=255)
cGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCAc < 1:6268691/93‑1 (MQ=255)
tttGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCGAACCAGTCATCAAATGCCGCACGAt > 2:3365/1‑93 (MQ=255)
tttGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGAt > 2:3469671/1‑93 (MQ=255)
tttGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGAt > 2:5600657/1‑93 (MQ=255)
cttGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGAt < 2:2768535/92‑1 (MQ=255)
tGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCa > 2:2504010/1‑93 (MQ=255)
gCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCaa > 1:154533/1‑93 (MQ=255)
gCATCAGTTGCTCACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCaa < 2:4043992/93‑1 (MQ=255)
cATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAAt < 1:1663356/93‑1 (MQ=255)
cATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAAt > 1:367910/1‑93 (MQ=255)
aGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAAc < 1:4704615/93‑1 (MQ=255)
aGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAAc < 1:4111657/93‑1 (MQ=255)
aGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAAc < 1:1510101/93‑1 (MQ=255)
gTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAAAGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACt > 2:6044632/1‑93 (MQ=255)
ttGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACtc > 2:6528657/1‑93 (MQ=255)
cTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACtcatc < 1:903748/93‑1 (MQ=255)
tGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACtcatca < 2:4826805/93‑1 (MQ=255)
tGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACtcatca > 2:2179428/1‑93 (MQ=255)
tGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACtcatca > 2:4601709/1‑93 (MQ=255)
aCGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACTCATCACg < 2:2448825/93‑1 (MQ=255)
cgctcgctATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACTCATCACga > 2:862262/1‑92 (MQ=255)
gCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACTCATCACGTa > 1:2740614/1‑93 (MQ=255)
gCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACTCATCACGTa < 1:5592882/93‑1 (MQ=255)
gCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACTCATCACGTa < 2:705628/93‑1 (MQ=255)
cTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACTCATCACGTAg > 2:4309423/1‑93 (MQ=255)
cTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACTCATCACGTAg > 2:3897122/1‑93 (MQ=255)
|
CCCTTTTCTGCCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCACTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACTCATCACGTAG > NC_000913/1787956‑1788134
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATCACCCTTTTCTGCCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCACTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACTCATCACGTAGCGGT > NC_000913/1787952‑1788138
|
ATCACCCTTTTCTGCCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCG < SRR4302536.3333991/94‑1 (MQ=60)
ATCACCCTTTTCTGCCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCG > SRR4302536.170795/1‑94 (MQ=60)
TCACCTTTTTCTGCCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGC < SRR4302536.1607303/94‑1 (MQ=60)
TCACCCTTTTCTGCCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGC < SRR4302536.3017846/94‑1 (MQ=60)
ACCCTTTTCTGCCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTA > SRR4302536.4557073/1‑94 (MQ=60)
CCTTTTCTGCCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATC > SRR4302536.312017/1‑94 (MQ=60)
CCTTTTCTGCCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATC < SRR4302536.5649445/94‑1 (MQ=60)
CCTTTTCTGCCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATC < SRR4302536.6017359/94‑1 (MQ=60)
CCTTTTCTGCCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATC > SRR4302536.1607905/1‑94 (MQ=60)
CTTTTCTGCCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCG > SRR4302536.2747671/1‑94 (MQ=60)
TTTCTGCCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCT < SRR4302536.6482390/94‑1 (MQ=60)
TTCTGCCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTA > SRR4302536.1872002/1‑94 (MQ=60)
CTGCCGCTTCAATCGTCCGTTGCACCAACCAGTTGCGCAATACCAGCGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTATC > SRR4302536.3550023/1‑94 (MQ=60)
CTGCCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAAC < SRR4302536.440746/94‑1 (MQ=60)
CTGCCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAAC < SRR4302536.711586/94‑1 (MQ=60)
GCCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCT > SRR4302536.5291422/1‑94 (MQ=60)
GCCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCT < SRR4302536.4617608/94‑1 (MQ=60)
CCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTC < SRR4302536.1184831/94‑1 (MQ=60)
CCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTC < SRR4302536.703322/94‑1 (MQ=60)
CCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTC < SRR4302536.254123/94‑1 (MQ=60)
CCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTC < SRR4302536.1408165/94‑1 (MQ=60)
CGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCG > SRR4302536.6884763/1‑94 (MQ=60)
TCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTT < SRR4302536.6082271/94‑1 (MQ=60)
TCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTT < SRR4302536.462541/94‑1 (MQ=60)
CAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTG < SRR4302536.1999016/94‑1 (MQ=60)
CAATCGCCCGTTGCACCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTG < SRR4302536.2088671/94‑1 (MQ=60)
ATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTT > SRR4302536.2636225/1‑94 (MQ=60)
ATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGATTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTT < SRR4302536.4189407/94‑1 (MQ=60)
TCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTG < SRR4302536.5103148/94‑1 (MQ=60)
TCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTG < SRR4302536.4694903/94‑1 (MQ=60)
TCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTG < SRR4302536.4151708/94‑1 (MQ=60)
TCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTG < SRR4302536.6610918/94‑1 (MQ=60)
CCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAA > SRR4302536.2336914/1‑94 (MQ=60)
CCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAA < SRR4302536.1327210/94‑1 (MQ=60)
CCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAA < SRR4302536.4154542/94‑1 (MQ=60)
CGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAAC < SRR4302536.1496392/94‑1 (MQ=60)
CGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAAC > SRR4302536.1858207/1‑94 (MQ=60)
CGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAAC > SRR4302536.1360021/1‑94 (MQ=60)
CGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAAC < SRR4302536.707670/94‑1 (MQ=60)
GTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACG < SRR4302536.818463/94‑1 (MQ=60)
TTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGC < SRR4302536.340062/94‑1 (MQ=60)
GCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCC < SRR4302536.4439283/94‑1 (MQ=60)
GCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCC > SRR4302536.4036920/1‑94 (MQ=60)
GCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCC > SRR4302536.4011829/1‑94 (MQ=60)
GCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCC > SRR4302536.4972073/1‑94 (MQ=60)
CCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCG < SRR4302536.4640589/94‑1 (MQ=60)
CAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACACCCCCGA > SRR4302536.784965/1‑94 (MQ=60)
AACCAGTTGCGCAATACCAGAGCGGGGGTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGAA > SRR4302536.6454546/1‑94 (MQ=60)
ACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATA > SRR4302536.400943/1‑94 (MQ=60)
gacgctcttccgatctctaaggtGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAAC < SRR4302536.5994509/71‑1 (MQ=60)
CAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAAC > SRR4302536.2446265/1‑94 (MQ=60)
AGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACG < SRR4302536.5728473/94‑1 (MQ=60)
TTGCGCAATCCCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGG > SRR4302536.6761675/1‑94 (MQ=60)
TTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGG < SRR4302536.4918695/94‑1 (MQ=60)
TTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGG < SRR4302536.2236380/94‑1 (MQ=60)
TGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGC < SRR4302536.1265140/94‑1 (MQ=60)
CGCAATGCCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAA > SRR4302536.4470785/1‑94 (MQ=60)
CGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCATACGCCCCCGATAACGGGCAA > SRR4302536.3728048/1‑94 (MQ=60)
CGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAA < SRR4302536.3566656/94‑1 (MQ=60)
GCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAA > SRR4302536.5860001/1‑94 (MQ=60)
GCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCACGATAACGGGCAAC > SRR4302536.6873673/1‑94 (MQ=60)
CAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAAC > SRR4302536.2563353/1‑94 (MQ=60)
AATACCGGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACC > SRR4302536.4366479/1‑94 (MQ=60)
ATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCA < SRR4302536.1474181/94‑1 (MQ=60)
TACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAG > SRR4302536.4353883/1‑94 (MQ=60)
ACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGT < SRR4302536.6336945/94‑1 (MQ=60)
ACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGT > SRR4302536.6298858/1‑94 (MQ=60)
CCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTC < SRR4302536.674839/94‑1 (MQ=60)
CCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTC < SRR4302536.295458/94‑1 (MQ=60)
CAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCA < SRR4302536.6521927/94‑1 (MQ=60)
TGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCAT > SRR4302536.896139/1‑94 (MQ=60)
AGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCAT < SRR4302536.4237890/94‑1 (MQ=60)
GAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATC < SRR4302536.5465893/94‑1 (MQ=60)
CGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAA > SRR4302536.287640/1‑94 (MQ=60)
GGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCGGTCATCAAAT < SRR4302536.6754210/94‑1 (MQ=60)
GGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAAT > SRR4302536.4852369/1‑94 (MQ=60)
GGGGTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAAT < SRR4302536.2046910/94‑1 (MQ=60)
GTTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCC > SRR4302536.1561829/1‑94 (MQ=60)
TTAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCG < SRR4302536.6418238/94‑1 (MQ=60)
TAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGC < SRR4302536.1552736/94‑1 (MQ=60)
TAACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGC > SRR4302536.5900220/1‑94 (MQ=60)
AACGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCA > SRR4302536.1544569/1‑94 (MQ=60)
CGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACG < SRR4302536.6455453/94‑1 (MQ=60)
CGCTTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACG < SRR4302536.1988166/94‑1 (MQ=60)
TTTGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATC < SRR4302536.3908472/94‑1 (MQ=60)
TGCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAA > SRR4302536.158523/1‑94 (MQ=60)
GCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAAT < SRR4302536.18519/94‑1 (MQ=60)
GCATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAAT > SRR4302536.377631/1‑94 (MQ=60)
CATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATA < SRR4302536.1711624/94‑1 (MQ=60)
ATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAA > SRR4302536.915392/1‑94 (MQ=60)
ATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAA > SRR4302536.5575448/1‑94 (MQ=60)
ATCAGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAA > SRR4302536.2823149/1‑94 (MQ=60)
AGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACT < SRR4302536.4846090/94‑1 (MQ=60)
AGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACT < SRR4302536.4233626/94‑1 (MQ=60)
AGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACT > SRR4302536.375656/1‑94 (MQ=60)
AGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACT < SRR4302536.2783201/94‑1 (MQ=60)
AGTTGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACT < SRR4302536.1554589/94‑1 (MQ=60)
TGCTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACTCAT < SRR4302536.4016239/94‑1 (MQ=60)
CTGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACTCATCA < SRR4302536.930377/94‑1 (MQ=60)
TGACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACTCATCAC < SRR4302536.4557612/94‑1 (MQ=60)
GACGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACTCATCACG < SRR4302536.4758901/94‑1 (MQ=60)
CGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACTCATCACGTA > SRR4302536.2822260/1‑94 (MQ=60)
CGCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACTCATCACGTA > SRR4302536.941741/1‑94 (MQ=60)
GCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACTCATCACGTAG < SRR4302536.1769667/94‑1 (MQ=60)
GCTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACTCATCACGTAG < SRR4302536.5759179/94‑1 (MQ=60)
CTCGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACTCATCACGTAGC < SRR4302536.5459442/94‑1 (MQ=60)
CGCTATCGCTAGCCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACTCATCACGTAGCGG < SRR4302536.947321/94‑1 (MQ=60)
CGCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACTCATCACGTAGCGG > SRR4302536.3104817/1‑94 (MQ=60)
GCTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACTCATCACGTAGCGGT > SRR4302536.3585158/1‑94 (MQ=60)
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ATCACCCTTTTCTGCCGCTTCAATCGCCCGTTGCGCCAACCAGTTGCGCAATACCAGAGCGGGGTTAACGCTTTGCATCAGTTGCTGACGCTCACTATCGCTAACCTCGTCTTGTTGCAAACGCCCCCGATAACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACTCATCACGTAGCGGT > NC_000913/1787952‑1788138
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
