Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,789,986 |
T→C |
D20G (GAC→GGC) |
b1707 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,789,986 | 0 | T | C | 100.0%
| 703.2
/ NA
| 214 | D20G (GAC→GGC) | b1707 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (82/132); total (82/132) |
Only 100 of 219 total aligned reads displayed.
GCTATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGTCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTT > NC_000913/1789896‑1790073
|
tataACCCGCCTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCctct < 2:2769517/93‑1 (MQ=255)
tataACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCctct < 1:3132561/93‑1 (MQ=255)
tataACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCctct < 1:1184315/93‑1 (MQ=255)
tataACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCctct > 2:26239/1‑93 (MQ=255)
tataACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCctct < 1:5162056/93‑1 (MQ=255)
ataACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGTAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGTCTCtt > 1:5195083/1‑93 (MQ=255)
ataACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCtt > 2:3191958/1‑93 (MQ=255)
taACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTa < 1:4181247/93‑1 (MQ=255)
aCCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTAtt < 1:2489021/93‑2 (MQ=255)
aCCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATc < 1:933806/93‑1 (MQ=255)
aCCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATc > 1:5061123/1‑93 (MQ=255)
aCTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAg > 2:2176587/1‑93 (MQ=255)
tcgtcgGGGTACGAACCGTCCCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGa > 1:6560436/1‑93 (MQ=255)
cgtcgGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGaa > 2:4010282/1‑93 (MQ=255)
gtcgGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACGCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGaaa < 2:5922308/93‑1 (MQ=255)
tcgGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAAt < 1:1134591/93‑1 (MQ=255)
cgGTATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATa < 1:3064154/93‑1 (MQ=255)
cgGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATa < 2:5181405/93‑1 (MQ=255)
cgGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATa < 1:821303/93‑1 (MQ=255)
gggATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAg > 1:5869174/1‑93 (MQ=255)
ggATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGc < 2:734331/93‑1 (MQ=255)
ggATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGc < 2:1911938/93‑1 (MQ=255)
gATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCa < 2:2930032/93‑1 (MQ=255)
aTACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCaa < 2:4431640/93‑1 (MQ=255)
aTACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCaa < 2:4831589/93‑1 (MQ=255)
aTACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCaa < 2:3760878/93‑1 (MQ=255)
tACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAAt < 1:6008075/93‑1 (MQ=255)
aCGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATc < 1:1702998/93‑1 (MQ=255)
cGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCa < 1:6617618/93‑1 (MQ=255)
cGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCa < 1:2092029/93‑1 (MQ=255)
cGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCa < 1:2213758/93‑1 (MQ=255)
cGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCa < 1:1931822/93‑1 (MQ=255)
gAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAg > 2:1257998/1‑93 (MQ=255)
aCCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGaa < 1:797380/93‑1 (MQ=255)
aCCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGaa < 1:5850642/93‑1 (MQ=255)
aCCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAAAAGCAATCAGaa > 1:1384487/1‑93 (MQ=255)
ccGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAAt < 1:3964809/93‑1 (MQ=255)
gTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGa < 2:4082545/93‑1 (MQ=255)
gTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGa > 2:569134/1‑93 (MQ=255)
gTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGa > 2:6338955/1‑93 (MQ=255)
gTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGa < 2:2005166/93‑1 (MQ=255)
tACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGAt < 1:5547117/93‑1 (MQ=255)
ccATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATaa < 1:1349620/93‑1 (MQ=255)
ccATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATaa > 1:6478460/1‑93 (MQ=255)
ccATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATaa > 2:5126301/1‑93 (MQ=255)
ccATCTTCACTGGAGAAATGCGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATaa < 1:2544728/93‑1 (MQ=255)
cATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATaaa < 1:3314620/93‑1 (MQ=255)
cATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATaaa < 2:562738/93‑1 (MQ=255)
aTCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAg < 2:2412571/93‑1 (MQ=255)
cTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGAt < 2:1878522/93‑1 (MQ=255)
cTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATa < 2:2074667/68‑1 (MQ=255)
cTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTcc < 2:4886475/93‑1 (MQ=255)
gaAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCaaaaa > 1:4415514/1‑93 (MQ=255)
gaAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCaaaaa > 2:1882230/1‑93 (MQ=255)
gaAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCaaaaa < 2:254270/93‑1 (MQ=255)
aaTGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCaaaaaaa < 1:571658/93‑1 (MQ=255)
aaTGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCaaaaaaa < 1:368632/93‑1 (MQ=255)
aaTGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCaaaaaaa < 1:2656963/93‑1 (MQ=255)
aTGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAAt > 2:6659268/1‑93 (MQ=255)
gggTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCt > 2:2482110/1‑93 (MQ=255)
tAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCa < 2:3005184/93‑1 (MQ=255)
aaTTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCAt < 2:3427537/93‑1 (MQ=255)
ttAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATgg > 1:3889378/1‑93 (MQ=255)
ttAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATgg < 1:2614464/93‑1 (MQ=255)
ttAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATgg < 1:6231987/93‑1 (MQ=255)
tAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGt > 2:6487592/1‑93 (MQ=255)
aaCTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTa < 2:858936/93‑1 (MQ=255)
aCTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTaa > 2:3278181/1‑93 (MQ=255)
cTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAAc > 1:1518768/1‑93 (MQ=255)
cTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAAc < 2:4358473/93‑1 (MQ=255)
tCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAAcc > 1:4262815/1‑93 (MQ=255)
tCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAAcc > 1:3451816/1‑93 (MQ=255)
tCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAAcc < 2:4182428/93‑1 (MQ=255)
aaCGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGt < 2:610662/93‑1 (MQ=255)
cGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTcc < 2:2964699/93‑1 (MQ=255)
gCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTccc < 1:2857207/93‑1 (MQ=255)
gCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTccc < 1:6342523/93‑1 (MQ=255)
ccGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCct < 1:6130659/93‑1 (MQ=255)
gACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCctct > 1:2058778/1‑93 (MQ=255)
gACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCctct < 1:3717285/93‑1 (MQ=255)
gACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCctct < 2:5308019/93‑1 (MQ=255)
gACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCctct < 1:3800039/93‑1 (MQ=255)
gACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCctct < 2:6463642/93‑1 (MQ=255)
gACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCctct > 1:4586149/1‑93 (MQ=255)
gACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCctct < 1:5068174/93‑1 (MQ=255)
aCAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCtctc > 2:1497539/1‑93 (MQ=255)
aGGACTTGCTTGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGaa < 1:2906037/93‑1 (MQ=255)
aCTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGa < 2:510465/93‑1 (MQ=255)
aCTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGa < 2:5472478/93‑1 (MQ=255)
cTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAgatt < 1:2428891/93‑4 (MQ=255)
cTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGAt > 2:4292617/1‑93 (MQ=255)
cTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGAt < 2:4191130/93‑1 (MQ=255)
ttGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATg > 2:6173477/1‑93 (MQ=255)
tGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGt < 1:4030116/93‑1 (MQ=255)
tcTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGtt < 1:1042419/92‑1 (MQ=255)
tGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGtttt > 2:5979454/1‑93 (MQ=255)
tGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGtttt < 2:5778234/93‑1 (MQ=255)
tGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGtttt > 1:5923017/1‑93 (MQ=255)
ggTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGttttt > 1:1237892/1‑93 (MQ=255)
ggTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGttttt > 2:5418380/1‑93 (MQ=255)
|
GCTATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGTCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTT > NC_000913/1789896‑1790073
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGCTATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGTCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTCAGTAT > NC_000913/1789895‑1790079
|
CGCTATAACCCGGCTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCT < SRR4302536.2241416/94‑1 (MQ=60)
CGCTATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCT < SRR4302536.6515588/94‑1 (MQ=60)
CGCTATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCT < SRR4302536.1022208/94‑1 (MQ=60)
GCTATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTC < SRR4302536.3473713/94‑1 (MQ=60)
TATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGTAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGTCTCTT > SRR4302536.5349986/1‑94 (MQ=60)
TATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTT < SRR4302536.3048256/94‑1 (MQ=60)
TATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTT < SRR4302536.3224172/94‑1 (MQ=60)
TATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTT < SRR4302536.5316079/94‑1 (MQ=60)
TATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTT > SRR4302536.5991096/1‑94 (MQ=60)
TATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTT < SRR4302536.1219958/94‑1 (MQ=60)
TATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTT > SRR4302536.84800/1‑94 (MQ=60)
TAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTAT < SRR4302536.4305447/94‑1 (MQ=60)
TAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTAT < SRR4302536.3992143/94‑1 (MQ=60)
AACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATC > SRR4302536.5212717/1‑94 (MQ=60)
ACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATTG < SRR4302536.2564113/94‑1 (MQ=60)
ACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCG < SRR4302536.961319/94‑1 (MQ=60)
CCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGG > SRR4302536.523138/1‑94 (MQ=60)
CGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCA > SRR4302536.3246154/1‑94 (MQ=60)
CGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCA > SRR4302536.4335049/1‑94 (MQ=60)
CTCGTCGGGGTACGAACCGTCCCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGA > SRR4302536.6755745/1‑94 (MQ=60)
GTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAAT < SRR4302536.1497/94‑1 (MQ=60)
TCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATA < SRR4302536.1168700/94‑1 (MQ=60)
CGGTATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAG < SRR4302536.3154019/94‑1 (MQ=60)
CGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAG < SRR4302536.845467/94‑1 (MQ=60)
CGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAG < SRR4302536.3816419/94‑1 (MQ=60)
CGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAG > SRR4302536.6044057/1‑94 (MQ=60)
GGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCA < SRR4302536.4611462/94‑1 (MQ=60)
ATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAAT < SRR4302536.2834285/94‑1 (MQ=60)
TACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATC < SRR4302536.6187187/94‑1 (MQ=60)
ACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCA < SRR4302536.1752279/94‑1 (MQ=60)
agaaccgttcccaCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAG < SRR4302536.295243/81‑1 (MQ=60)
CGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAG < SRR4302536.2280618/94‑1 (MQ=60)
CGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAG < SRR4302536.6814364/94‑1 (MQ=60)
CGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAG < SRR4302536.2154968/94‑1 (MQ=60)
CGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAG < SRR4302536.1989921/94‑1 (MQ=60)
CGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAAGAGCAATCAG < SRR4302536.6731872/94‑1 (MQ=60)
AACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAA < SRR4302536.6025430/94‑1 (MQ=60)
AACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAAAAGCAATCAGAA > SRR4302536.1425720/1‑94 (MQ=60)
ACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAAT > SRR4302536.1101728/1‑94 (MQ=60)
ACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAAT < SRR4302536.820749/94‑1 (MQ=60)
ACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAAT < SRR4302536.6024949/94‑1 (MQ=60)
ACAGTACCATCTTCACTGGAGAAATAGTTAATTAACTCAACGCCGACAAGGACTTCCTGGTTGCCGCTTATCGGCAGAAAATAGCAATCAGAAA < SRR4302536.999211/94‑1 (MQ=60)
CCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATG < SRR4302536.4082520/94‑1 (MQ=60)
CCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATG > SRR4302536.2730508/1‑94 (MQ=60)
CGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGA > SRR4302536.3197351/1‑94 (MQ=60)
GTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGAT < SRR4302536.2248718/94‑1 (MQ=60)
GTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGAT > SRR4302536.1624780/1‑94 (MQ=60)
TACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATA < SRR4302536.5712391/94‑1 (MQ=60)
TACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATA > SRR4302536.5842897/1‑94 (MQ=60)
ACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAA > SRR4302536.6671744/1‑94 (MQ=60)
ACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAA < SRR4302536.5457266/94‑1 (MQ=60)
CCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAA < SRR4302536.1389875/94‑1 (MQ=60)
CCATCTTCACTGGAGAAATGCGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAA < SRR4302536.2621377/94‑1 (MQ=60)
CATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAG < SRR4302536.2725081/94‑1 (MQ=60)
CATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAG < SRR4302536.3412584/94‑1 (MQ=60)
CATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAG < SRR4302536.837260/94‑1 (MQ=60)
TCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGAT < SRR4302536.3750897/94‑1 (MQ=60)
CTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATT < SRR4302536.6325955/94‑1 (MQ=60)
CTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATT < SRR4302536.4413167/94‑1 (MQ=60)
CTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATT < SRR4302536.6850049/94‑1 (MQ=60)
CTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATT < SRR4302536.5018717/94‑1 (MQ=60)
TTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTC < SRR4302536.4191059/94‑1 (MQ=60)
ACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGaccttagagatcggaagagcgtcg > SRR4302536.2137152/1‑70 (MQ=60)
ACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCC > SRR4302536.3448409/1‑94 (MQ=60)
CTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCA > SRR4302536.61260/1‑94 (MQ=60)
AGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAA > SRR4302536.6046737/1‑94 (MQ=60)
AGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAA > SRR4302536.4547670/1‑94 (MQ=60)
AATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAAT < SRR4302536.2672398/94‑1 (MQ=60)
AATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAAT < SRR4302536.378373/94‑1 (MQ=60)
AATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAAT < SRR4302536.586194/94‑1 (MQ=60)
AATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAAT > SRR4302536.2068041/1‑94 (MQ=60)
AATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAAT < SRR4302536.2736496/94‑1 (MQ=60)
GGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTT < SRR4302536.6459308/94‑1 (MQ=60)
TAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCAT > SRR4302536.1396513/1‑94 (MQ=60)
TAATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCAT > SRR4302536.2530520/1‑94 (MQ=60)
AATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATG < SRR4302536.4103662/94‑1 (MQ=60)
ATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGG > SRR4302536.6647225/1‑94 (MQ=60)
ATTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGG > SRR4302536.4005036/1‑94 (MQ=60)
TTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGT < SRR4302536.6417666/94‑1 (MQ=60)
TTAACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGT < SRR4302536.2692910/94‑1 (MQ=60)
ACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAAC > SRR4302536.1563470/1‑94 (MQ=60)
ACTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAAC > SRR4302536.5340518/1‑94 (MQ=60)
CTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACC > SRR4302536.4389866/1‑94 (MQ=60)
CTCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACC > SRR4302536.3554621/1‑94 (MQ=60)
TCAACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCG > SRR4302536.4050993/1‑94 (MQ=60)
AACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTC > SRR4302536.6805824/1‑94 (MQ=60)
ACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCC > SRR4302536.18601/1‑94 (MQ=60)
ACGCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCC > SRR4302536.5212817/1‑94 (MQ=60)
GCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCT < SRR4302536.2941679/94‑1 (MQ=60)
GCCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCT < SRR4302536.6531476/94‑1 (MQ=60)
CCGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTC < SRR4302536.6313371/94‑1 (MQ=60)
CGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAATCGTCCCTCT < SRR4302536.6766097/94‑1 (MQ=60)
CGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCT > SRR4302536.2208053/1‑94 (MQ=60)
CGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCT > SRR4302536.4723806/1‑94 (MQ=60)
CGACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCT > SRR4302536.2120778/1‑94 (MQ=60)
GACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTGACCGTCCCTCTC > SRR4302536.1216811/1‑94 (MQ=60)
GACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTC < SRR4302536.5219933/94‑1 (MQ=60)
GACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTC < SRR4302536.3913356/94‑1 (MQ=60)
GACAAGGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTC < SRR4302536.3828413/94‑1 (MQ=60)
AGGACTTGCTTGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAG < SRR4302536.2991807/94‑1 (MQ=60)
GGACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGG < SRR4302536.1445012/94‑1 (MQ=60)
ACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGAT < SRR4302536.6252709/94‑1 (MQ=60)
ACTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGAT < SRR4302536.4599746/94‑1 (MQ=60)
CTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTGCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATG < SRR4302536.2307623/94‑1 (MQ=60)
CTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGattt < SRR4302536.2502337/94‑5 (MQ=60)
CTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATG > SRR4302536.4047333/1‑94 (MQ=60)
CTTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATG > SRR4302536.1278171/1‑94 (MQ=60)
TTGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGT < SRR4302536.6267401/94‑1 (MQ=60)
TGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTT < SRR4302536.4149649/94‑1 (MQ=60)
TGCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTT < SRR4302536.2603804/94‑1 (MQ=60)
TCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTT < SRR4302536.1073411/94‑1 (MQ=60)
GCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTT < SRR4302536.5708486/94‑1 (MQ=60)
GCTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCCCCAAAAAAACCTTCATGGTACCCGCCCCTCTCGAAGGATGTTT < SRR4302536.620088/94‑1 (MQ=60)
CTGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTT > SRR4302536.6099454/1‑94 (MQ=60)
TGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTT < SRR4302536.3909381/94‑1 (MQ=60)
TGGTTGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTT > SRR4302536.1275066/1‑94 (MQ=60)
TGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTCAGT > SRR4302536.2038494/1‑94 (MQ=60)
TGCCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTCAGT > SRR4302536.952995/1‑94 (MQ=60)
CCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTCAGTAT < SRR4302536.4918834/94‑1 (MQ=60)
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CGCTATAACCCGACTCGTCGGGATACGAACCGTACCATCTTCACTGGAGAAATGGGTAATTAACTCAACGCCGACAAGGACTTGCTGGTTGTCTCTTATCGGCAGGAAATAGCAATCAGAATGATAAAGATTCTCCAAAAAAATCTTCATGGTAACCGTCCCTCTCGAAGGATGTTTTTCAGTAT > NC_000913/1789895‑1790079
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
