Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,793,668 |
A→G |
R767R (CGT→CGC) |
pheT ← |
phenylalanine tRNA synthetase beta‑subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,793,668 | 0 | A | G | 100.0%
| 719.4
/ NA
| 219 | R767R (CGT→CGC) | pheT | phenylalanine tRNA synthetase beta‑subunit |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (124/95); total (124/95) |
Only 100 of 224 total aligned reads displayed.
GGTTCAATCCCTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTACGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCAAATAAGTTTAC > NC_000913/1793578‑1793757
|
ggTTCAATCCCTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCg > 1:1347865/1‑93 (MQ=255)
ggTTCAATCCCTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCg > 2:4451913/1‑93 (MQ=255)
aaTCCCTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTgg > 2:4805627/1‑93 (MQ=255)
aaTCCCTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTgg > 2:4047001/1‑93 (MQ=255)
aTCCCTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGt > 1:5699753/1‑93 (MQ=255)
aTCCCTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGt > 2:6306489/1‑93 (MQ=255)
aTCCCTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTAGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGt > 2:5666294/1‑93 (MQ=255)
aTCCCTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACA‑TTGGCGACGGTAGCGGCCATTTCCTCTTCTTCGAGTGTGCGGCTggga > 1:1412659/1‑91 (MQ=255)
cccTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTAt > 2:4655628/1‑93 (MQ=255)
cccTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTAt < 1:2861208/93‑1 (MQ=255)
ccTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTAtt > 2:5868691/1‑92 (MQ=255)
ccTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATc < 2:3167764/93‑1 (MQ=255)
ccTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATc < 2:3986937/93‑1 (MQ=255)
cTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCt > 2:6445031/1‑93 (MQ=255)
tCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCtt > 2:1146465/1‑93 (MQ=255)
tCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCtt > 1:3552863/1‑93 (MQ=255)
tCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCtt < 1:4938164/93‑1 (MQ=255)
tCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCtt < 1:6422447/93‑1 (MQ=255)
aaTGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGc > 1:5480078/1‑93 (MQ=255)
atgatgCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCa > 1:2965379/1‑93 (MQ=255)
atgatgCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCa < 2:4569456/93‑1 (MQ=255)
gCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATc < 1:2779493/93‑1 (MQ=255)
gCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATc > 1:4026366/1‑93 (MQ=255)
ccTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCa < 2:1789320/93‑1 (MQ=255)
ccTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCa > 2:745218/1‑93 (MQ=255)
cTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGCTCAg > 2:5330655/1‑93 (MQ=255)
cTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAg > 2:6559848/1‑93 (MQ=255)
cTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAg < 2:2793904/93‑1 (MQ=255)
tGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAgg > 2:6380933/1‑93 (MQ=255)
gAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATTACGCt > 2:2680705/1‑93 (MQ=255)
gAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCt < 1:3313238/93‑1 (MQ=255)
gAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCt < 1:5459109/93‑1 (MQ=255)
gAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCt > 1:5108809/1‑93 (MQ=255)
aaTCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCtt < 1:6089612/93‑1 (MQ=255)
aaTCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCtt < 2:2435312/93‑1 (MQ=255)
tCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTAt > 2:6621971/1‑93 (MQ=255)
tCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTAt < 1:6200973/93‑1 (MQ=255)
cGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATg < 2:4977089/93‑1 (MQ=255)
gCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATgg > 2:219598/1‑93 (MQ=255)
ctctTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGc < 2:4194977/93‑1 (MQ=255)
tctTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCg > 1:2252407/1‑93 (MQ=255)
tctTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCg > 1:1767658/1‑93 (MQ=255)
ttttAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAg < 2:5118316/93‑1 (MQ=255)
ttttAATGCATCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAg > 1:1016528/1‑93 (MQ=255)
tttAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAgg > 1:515591/1‑93 (MQ=255)
aaTGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGctc < 1:6371812/93‑1 (MQ=255)
aTGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGctct < 2:3826333/93‑1 (MQ=255)
aTGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGctct < 2:3029448/93‑1 (MQ=255)
tGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCtt < 1:6512925/93‑1 (MQ=255)
tGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCtt > 2:5606105/1‑93 (MQ=255)
gCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTta > 2:3210711/1‑93 (MQ=255)
gCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTta < 1:2237987/93‑1 (MQ=255)
ccTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTtat > 2:6161240/1‑93 (MQ=255)
ccTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTtat < 2:4330578/93‑1 (MQ=255)
ctctACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGATCTtata > 1:905521/1‑93 (MQ=255)
tACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGGTCAGGCTTATGGCGAGGCTCTTATAccc > 1:5014293/1‑93 (MQ=255)
tACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATAccc > 2:2927323/1‑93 (MQ=255)
acacATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATAcccc > 1:1610658/1‑93 (MQ=255)
acacATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATAcccc < 2:2280309/93‑1 (MQ=255)
acacATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATAcccc > 2:3531559/1‑93 (MQ=255)
acaTTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTc < 1:1212803/93‑1 (MQ=255)
caTTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTcc > 1:2062030/1‑93 (MQ=255)
ggCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAac < 1:5513382/93‑1 (MQ=255)
cGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAacac < 1:1833115/93‑1 (MQ=255)
gcGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACAccc < 2:1929240/92‑1 (MQ=255)
aCGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACAccc < 1:265028/93‑1 (MQ=255)
aCGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACAccc < 1:6650990/93‑1 (MQ=255)
cGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATCCCCCTCCGCAACACCCt < 1:5644202/93‑1 (MQ=255)
cGGTAGCGGCAATCTCCTCTCCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCt < 1:4343562/93‑1 (MQ=255)
ggTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCtt > 1:3356506/1‑93 (MQ=255)
ggTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCtt > 1:389132/1‑93 (MQ=255)
aGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTAcc > 1:5888234/1‑93 (MQ=255)
gCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACcg > 2:1343487/1‑93 (MQ=255)
cGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATATCCCTCCGCAACACCCTTACcgc > 2:5821493/1‑93 (MQ=255)
ggCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACcgcg > 2:6507777/1‑93 (MQ=255)
ggCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACcgcg < 1:4621131/93‑1 (MQ=255)
gCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCgg > 2:5049749/1‑93 (MQ=255)
aaTCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTa < 1:407409/93‑1 (MQ=255)
aaTCTCCTCTTCTTCGAGGGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTa > 2:5621443/1‑93 (MQ=255)
aTCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTac > 1:5562956/1‑93 (MQ=255)
tctcCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTaca > 2:3057402/1‑93 (MQ=255)
ctcctcTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTacac < 2:1267925/93‑1 (MQ=255)
tcctcTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACg < 1:3989690/93‑1 (MQ=255)
tcctcTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACg > 2:5717093/1‑93 (MQ=255)
cctcTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGt < 1:4176357/93‑1 (MQ=255)
ctctTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTc > 2:1655586/1‑93 (MQ=255)
ctctTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTc < 1:4691847/93‑1 (MQ=255)
tcttctTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCa < 1:6710711/93‑1 (MQ=255)
tcttctTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCa < 1:5797359/93‑1 (MQ=255)
tcttcGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCAAAt < 1:3725877/93‑1 (MQ=255)
tcttcGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCAAAt < 1:2302025/93‑1 (MQ=255)
tcttcGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCAAAt < 2:2397608/93‑1 (MQ=255)
cttcGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCAAATa > 1:2985720/1‑93 (MQ=255)
cttcGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCAAATa < 2:6678499/93‑1 (MQ=255)
ttcGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCAAATaa > 2:4864339/1‑93 (MQ=255)
tcGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCAAATAAg < 2:599546/93‑1 (MQ=255)
cGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCAAATAAGt < 1:1657178/93‑1 (MQ=255)
gAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCAAATAAGtt < 1:1054581/93‑1 (MQ=255)
gtgtGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCAAATAAGTTTa > 2:1599112/1‑93 (MQ=255)
gtgtGCGGCTGGCATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCAAATAAGTTTa > 1:6584256/1‑93 (MQ=255)
|
GGTTCAATCCCTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTACGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCAAATAAGTTTAC > NC_000913/1793578‑1793757
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TAGGTTCAATCCCTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTACGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCAAATAAGTTTACGCC > NC_000913/1793576‑1793760
|
TAGGTTCAATCCCTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGC > SRR4302536.1118220/1‑94 (MQ=60)
AGGTTCAATCCCTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCG > SRR4302536.1388039/1‑94 (MQ=60)
AGGTTCAATCCCTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCG < SRR4302536.1350398/94‑1 (MQ=60)
CAATCCCTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGG < SRR4302536.5306542/94‑1 (MQ=60)
CAATCCCTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGG > SRR4302536.1356530/1‑94 (MQ=60)
AATCCCTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGT > SRR4302536.5869223/1‑94 (MQ=60)
AATCCCTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGT > SRR4302536.5868145/1‑94 (MQ=60)
AATCCCTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGT > SRR4302536.6857014/1‑94 (MQ=60)
AATCCCTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGT > SRR4302536.5888511/1‑94 (MQ=60)
AATCCCTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACA‑TTGGCGACGGTAGCGGCCATTTCCTCTTCTTCGAGTGTGCGGCTGGGA > SRR4302536.1454671/1‑94 (MQ=60)
AATCCCTCAATGATGCCTGGAATCGCTCTTTTAAAGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGT > SRR4302536.6701870/1‑94 (MQ=60)
CCCTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATC < SRR4302536.2945760/94‑1 (MQ=60)
CCTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCT < SRR4302536.5201120/94‑1 (MQ=60)
CCTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCT < SRR4302536.3055941/94‑1 (MQ=60)
CCTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCT < SRR4302536.3056471/94‑1 (MQ=60)
CCTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCT < SRR4302536.6628789/94‑1 (MQ=60)
CTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTT > SRR4302536.3659092/1‑94 (MQ=60)
CTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTT < SRR4302536.1760311/94‑1 (MQ=60)
TCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTG < SRR4302536.6614398/94‑1 (MQ=60)
TCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTG < SRR4302536.5086550/94‑1 (MQ=60)
CAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGC > SRR4302536.5643717/1‑94 (MQ=60)
CAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGC > SRR4302536.6588254/1‑94 (MQ=60)
AATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCA > SRR4302536.6349279/1‑94 (MQ=60)
AATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCA > SRR4302536.3052722/1‑94 (MQ=60)
AATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCA < SRR4302536.2555168/94‑1 (MQ=60)
TGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATC < SRR4302536.6504139/94‑1 (MQ=60)
TGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATC > SRR4302536.4145797/1‑94 (MQ=60)
GCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCA < SRR4302536.2862078/94‑1 (MQ=60)
CCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGGAAGCTCCTCTACTTCGAGTGTGCGGCTGGTATCTTGCAGGAGCAG < SRR4302536.5807018/94‑1 (MQ=60)
CCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAG > SRR4302536.5638850/1‑94 (MQ=60)
GGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCT > SRR4302536.5261495/1‑94 (MQ=60)
GGAATCGCTCTTTTAATGCATCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCT < SRR4302536.2885219/94‑1 (MQ=60)
GAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTT < SRR4302536.5622322/94‑1 (MQ=60)
GAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTT > SRR4302536.577485/1‑94 (MQ=60)
GAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTT < SRR4302536.6736012/94‑1 (MQ=60)
GAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTT < SRR4302536.3411143/94‑1 (MQ=60)
AATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTA > SRR4302536.3748537/1‑94 (MQ=60)
AATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTA < SRR4302536.6271213/94‑1 (MQ=60)
TCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATG < SRR4302536.6385670/94‑1 (MQ=60)
CGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGG < SRR4302536.5609866/94‑1 (MQ=60)
CGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGG < SRR4302536.2358337/94‑1 (MQ=60)
CGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGG > SRR4302536.4192297/1‑94 (MQ=60)
CGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGG > SRR4302536.1422014/1‑94 (MQ=60)
CTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCG < SRR4302536.6007963/94‑1 (MQ=60)
CTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCG > SRR4302536.2320607/1‑94 (MQ=60)
CTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCG > SRR4302536.1821143/1‑94 (MQ=60)
TCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGA < SRR4302536.6934743/94‑1 (MQ=60)
CTTTTAATGCATCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAG > SRR4302536.1046583/1‑94 (MQ=60)
TTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGG > SRR4302536.528816/1‑94 (MQ=60)
TTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCT < SRR4302536.4979941/94‑1 (MQ=60)
AATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCT < SRR4302536.3085981/94‑1 (MQ=60)
AATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCT < SRR4302536.6561696/94‑1 (MQ=60)
ATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTT > SRR4302536.6088423/1‑94 (MQ=60)
ATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTT < SRR4302536.4199337/94‑1 (MQ=60)
TGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCTGGATCAGGCTTATGGCGAGGCTCTTA < SRR4302536.3717574/94‑1 (MQ=60)
TGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTA < SRR4302536.6706997/94‑1 (MQ=60)
TGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTA > SRR4302536.1074993/1‑94 (MQ=60)
GCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTAT < SRR4302536.2305696/94‑1 (MQ=60)
GCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTAT > SRR4302536.4152194/1‑94 (MQ=60)
GCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTAT > SRR4302536.1500025/1‑94 (MQ=60)
CCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATA < SRR4302536.3552290/94‑1 (MQ=60)
CCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATA > SRR4302536.2190082/1‑94 (MQ=60)
CCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATA < SRR4302536.2043958/94‑1 (MQ=60)
CCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGATCTTATA > SRR4302536.932204/1‑94 (MQ=60)
CTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGGTCAGGCTTATGGCGAGGCTCTTATACCC > SRR4302536.5164664/1‑94 (MQ=60)
CTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCC < SRR4302536.512189/94‑1 (MQ=60)
TACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCC > SRR4302536.1657623/1‑94 (MQ=60)
CACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTC > SRR4302536.4118052/1‑94 (MQ=60)
CACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCACTTATACCCCTC > SRR4302536.2306168/1‑94 (MQ=60)
ACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCC > SRR4302536.5706416/1‑94 (MQ=60)
ACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCC > SRR4302536.2124129/1‑94 (MQ=60)
ACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCC > SRR4302536.6848077/1‑94 (MQ=60)
ACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCC < SRR4302536.1249234/94‑1 (MQ=60)
CATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGGTCAGGCTTATGGCGAGGCTCTTATAACCCTCCG > SRR4302536.837200/1‑94 (MQ=60)
ATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGC > SRR4302536.196945/1‑94 (MQ=60)
GGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACA < SRR4302536.5677816/94‑1 (MQ=60)
CGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACC < SRR4302536.1888377/94‑1 (MQ=60)
GACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCC > SRR4302536.165726/1‑94 (MQ=60)
ACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCT < SRR4302536.6848711/94‑1 (MQ=60)
ACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCT < SRR4302536.272103/94‑1 (MQ=60)
ACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCT < SRR4302536.5672541/94‑1 (MQ=60)
CGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATCCCCCTCCGCAACACCCTT < SRR4302536.5811899/94‑1 (MQ=60)
CGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTT > SRR4302536.3851380/1‑94 (MQ=60)
CGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTT > SRR4302536.399407/1‑94 (MQ=60)
CGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTT > SRR4302536.3456131/1‑94 (MQ=60)
CGGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTT < SRR4302536.4572844/94‑1 (MQ=60)
CGGTAGCGGCAATCTCCTCTCCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTT < SRR4302536.4473610/94‑1 (MQ=60)
GGTAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGATCTTATACCCCTCCGCAACACCCTTA > SRR4302536.5547427/1‑94 (MQ=60)
TAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACC > SRR4302536.2430478/1‑94 (MQ=60)
TAGCGGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACC > SRR4302536.6063596/1‑94 (MQ=60)
GGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGTGG > SRR4302536.1092786/1‑94 (MQ=60)
GGCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGG < SRR4302536.4759979/94‑1 (MQ=60)
GCAATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGT > SRR4302536.3048178/1‑94 (MQ=60)
AATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTAC > SRR4302536.5728634/1‑94 (MQ=60)
AATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTAC < SRR4302536.418158/94‑1 (MQ=60)
ATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACA > SRR4302536.5738403/1‑94 (MQ=60)
ATCTCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACA > SRR4302536.4007360/1‑94 (MQ=60)
TCCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGT < SRR4302536.4108102/94‑1 (MQ=60)
CCTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTC < SRR4302536.4300426/94‑1 (MQ=60)
CTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCA > SRR4302536.6164590/1‑94 (MQ=60)
CTCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCA < SRR4302536.4832922/94‑1 (MQ=60)
TCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCAA < SRR4302536.5969976/94‑1 (MQ=60)
TCTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCAA < SRR4302536.6909957/94‑1 (MQ=60)
CTTCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCAAA > SRR4302536.4447425/1‑94 (MQ=60)
TCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCAAATA > SRR4302536.3073584/1‑94 (MQ=60)
TCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCAAATA < SRR4302536.2371867/94‑1 (MQ=60)
TCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCAAATA < SRR4302536.3837245/94‑1 (MQ=60)
TCTTCGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCAAATA > SRR4302536.4965559/1‑94 (MQ=60)
CGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCAAATAAGTT < SRR4302536.1705310/94‑1 (MQ=60)
CGAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCAAATAAGTT > SRR4302536.3412419/1‑94 (MQ=60)
GAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTCCCGCGGTACACGTCAAATAAGTTT < SRR4302536.1850129/94‑1 (MQ=60)
GAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCAAATAAGTTT > SRR4302536.2764633/1‑94 (MQ=60)
GAGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCAAATAAGTTT < SRR4302536.1086098/94‑1 (MQ=60)
AGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCAAATAAGTTTA > SRR4302536.1500445/1‑94 (MQ=60)
AGTGTGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCAAATAAGTTTA > SRR4302536.4804681/1‑94 (MQ=60)
AGTGTGCGGCTGGCATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCAAATAAGTTTA > SRR4302536.6780149/1‑94 (MQ=60)
TGCGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCAAATAAGTTTACGCC < SRR4302536.2662094/94‑1 (MQ=60)
|
TAGGTTCAATCCCTCAATGATGCCTGGAATCGCTCTTTTAATGCCTCTACACATTTGGCGACGGTAGCGGCAATCTCCTCTTCTTCGAGTGTACGGCTGGTATCTTGCAGGATCAGGCTTATGGCGAGGCTCTTATACCCCTCCGCAACACCCTTACCGCGGTACACGTCAAATAAGTTTACGCC > NC_000913/1793576‑1793760
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
