Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,904,576 |
G→A |
P170L (CCC→CTC) |
yebH ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,904,576 | 0 | G | A | 100.0%
| 759.5
/ NA
| 205 | P170L (CCC→CTC) | yebH | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (99/106); total (99/106) |
Only 100 of 210 total aligned reads displayed.
GGTGCATGAAGATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGGGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAACGGCAAACGG > NC_000913/1904486‑1904665
|
gTGCATGAAGATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCt < 1:5466998/93‑1 (MQ=255)
gTGCATGAAGATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCt > 1:4788330/1‑93 (MQ=255)
gCATGAAGATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTc < 1:1108746/93‑1 (MQ=255)
gCATGAAGATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTc < 1:4411816/93‑1 (MQ=255)
aTGAAGATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCac > 2:1953318/1‑93 (MQ=255)
aTGAAGATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCac > 2:4202703/1‑93 (MQ=255)
tGAAGATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCact > 1:1434455/1‑93 (MQ=255)
gAAGATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCacta < 1:1923472/93‑1 (MQ=255)
aaGATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCactac < 2:2735368/93‑1 (MQ=255)
aGATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCactact > 1:3925554/1‑93 (MQ=255)
gATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTc > 1:812754/1‑93 (MQ=255)
tGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGt < 1:6621554/93‑1 (MQ=255)
tGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGt < 1:5100186/93‑1 (MQ=255)
tACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGc < 2:1802183/93‑1 (MQ=255)
tACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGc > 2:362557/1‑93 (MQ=255)
tCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAAt < 1:1407572/93‑1 (MQ=255)
aTTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAAttt > 1:4247617/1‑92 (MQ=255)
aTTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAAttc > 2:1512323/1‑93 (MQ=255)
aTTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAAttc > 1:3171441/1‑93 (MQ=255)
ttGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAAttct < 1:289441/93‑1 (MQ=255)
gTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAAttcttc < 1:622579/93‑1 (MQ=255)
tAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATtcttct > 2:856095/1‑93 (MQ=255)
aaTCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGc > 2:1339426/1‑93 (MQ=255)
aaTCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGc < 1:2771957/93‑1 (MQ=255)
aaTCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGc < 1:5711646/93‑1 (MQ=255)
aaTCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGc > 2:197842/1‑93 (MQ=255)
aTCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCt < 2:6530717/93‑1 (MQ=255)
aTCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCt > 1:3570103/1‑93 (MQ=255)
aTCAGCCCCTTCAACTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCt > 2:1162269/1‑93 (MQ=255)
cAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCttt > 1:3540022/1‑93 (MQ=255)
gCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTac < 2:5977640/93‑1 (MQ=255)
gCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAATAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTac < 1:1600738/93‑1 (MQ=255)
ccccTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTaca < 1:5230316/93‑1 (MQ=255)
cccTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTacac > 1:2385866/1‑93 (MQ=255)
cccTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTacac < 1:2853289/93‑1 (MQ=255)
cccTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTacac < 1:1572108/93‑1 (MQ=255)
cccTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTacac < 2:681215/93‑1 (MQ=255)
ccTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACg > 2:6124431/1‑93 (MQ=255)
ccTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACg < 2:1838297/93‑1 (MQ=255)
cTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACgg < 1:2480981/93‑1 (MQ=255)
cTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACgg < 1:5801499/93‑1 (MQ=255)
cTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACgg < 2:328567/93‑1 (MQ=255)
cTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACgg < 2:239530/93‑1 (MQ=255)
ttCAGCTCAATCAAATGTCGCGGACCCGACGTAGCAGTAATGACCCAGCCGCCGAGCTTCACTGCTCGTGCTAATTCTTCTGCTTTACACGgc < 2:2255313/93‑1 (MQ=255)
cAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGgcgc > 2:565449/1‑93 (MQ=255)
aGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGcgcg > 2:1191236/1‑93 (MQ=255)
aGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGcgcg > 1:6508916/1‑93 (MQ=255)
aGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGcgcg > 1:6707935/1‑93 (MQ=255)
gCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGt < 2:300231/93‑1 (MQ=255)
gCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGt > 1:30764/1‑93 (MQ=255)
gCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGt > 1:2642191/1‑93 (MQ=255)
tCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTaa > 1:743164/1‑93 (MQ=255)
tCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTaa > 1:990007/1‑93 (MQ=255)
ccATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTaaa < 1:3636373/93‑1 (MQ=255)
ccATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTaaa > 1:3467036/1‑93 (MQ=255)
aTCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAAtc > 1:1805462/1‑92 (MQ=255)
aTCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATa > 2:2911847/1‑93 (MQ=255)
tCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATAc > 2:6204214/1‑93 (MQ=255)
tCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATAc < 2:4430509/93‑1 (MQ=255)
cAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACg < 2:1447102/93‑1 (MQ=255)
cAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACg < 2:5872880/93‑1 (MQ=255)
cAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACg > 1:4565625/1‑93 (MQ=255)
aaTGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACTGCGCGTAAATACGta > 1:1675948/1‑93 (MQ=255)
aaTGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGta < 1:3768292/93‑1 (MQ=255)
aaTGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGta < 1:3402910/93‑1 (MQ=255)
aTGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGtat < 2:172008/93‑1 (MQ=255)
aTGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGtat > 2:6440922/1‑93 (MQ=255)
tGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGtatt < 2:3164064/93‑1 (MQ=255)
gTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGtatta < 1:603400/93‑1 (MQ=255)
gTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGtatta < 2:4403017/93‑1 (MQ=255)
tCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGtattat > 2:2217611/1‑93 (MQ=255)
tCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGtattat < 1:5345967/93‑1 (MQ=255)
gcgcgGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGtattat < 2:1576643/92‑1 (MQ=255)
gcgGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATgg > 2:470253/1‑93 (MQ=255)
gTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGt > 2:102386/1‑93 (MQ=255)
gTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCATAAATACGTATTATGGCGt < 1:6543995/93‑1 (MQ=255)
ccGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCa < 2:2354807/93‑1 (MQ=255)
ccGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCa > 2:2293666/1‑93 (MQ=255)
cGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCAt < 2:4822921/93‑1 (MQ=255)
ggCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATa < 1:4079853/93‑1 (MQ=255)
gCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATAc < 2:5418121/93‑1 (MQ=255)
gCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATAc > 1:1229782/1‑93 (MQ=255)
gCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATAc < 1:5296986/93‑1 (MQ=255)
gTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTg > 1:1297947/1‑93 (MQ=255)
gTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTg > 2:6512082/1‑93 (MQ=255)
tGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTgg < 2:5548279/93‑1 (MQ=255)
tGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTgg < 1:3955367/93‑1 (MQ=255)
ggCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGt < 1:5953856/93‑1 (MQ=255)
ggCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGt < 2:2812224/93‑1 (MQ=255)
gCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTa < 1:4648663/93‑1 (MQ=255)
cAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTAt < 1:2291145/93‑1 (MQ=255)
aaTGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGa > 2:6005908/1‑93 (MQ=255)
aTGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGaa > 2:4933617/1‑93 (MQ=255)
gACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGaaaa > 1:5147416/1‑93 (MQ=255)
aCCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAAc > 1:4927915/1‑93 (MQ=255)
cccAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAACg > 1:2753438/1‑93 (MQ=255)
cAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAACGGc > 2:353693/1‑93 (MQ=255)
gccgccGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAACGGCaa > 2:3826187/1‑93 (MQ=255)
ccgccgAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAACGGCaaa < 2:5161223/93‑1 (MQ=255)
ccgAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAACGGCAAACgg < 2:3637363/93‑1 (MQ=255)
|
GGTGCATGAAGATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGGGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAACGGCAAACGG > NC_000913/1904486‑1904665
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGAGGTGCATGAAGATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGGGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAACGGCAAACGGTGGC > NC_000913/1904483‑1904669
|
TGAGGTGCATGAAGATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGA < SRR4302536.4053547/94‑1 (MQ=60)
GGTGCATGAAGATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCT > SRR4302536.4932482/1‑94 (MQ=60)
GTGCATGAAGATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTT < SRR4302536.5787876/94‑1 (MQ=60)
GTGCATGAAGATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTT < SRR4302536.5630359/94‑1 (MQ=60)
GCATGAAGATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCA < SRR4302536.1142011/94‑1 (MQ=60)
GCATGAAGATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCA < SRR4302536.4543831/94‑1 (MQ=60)
CATGAAGATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCAC > SRR4302536.863978/1‑94 (MQ=60)
ATGAAGATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACT > SRR4302536.1477017/1‑94 (MQ=60)
ATGAAGATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACT < SRR4302536.3995501/94‑1 (MQ=60)
TGAAGATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTA < SRR4302536.6282054/94‑1 (MQ=60)
TGAAGATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTA > SRR4302536.4930927/1‑94 (MQ=60)
GAAGATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTAC < SRR4302536.1981340/94‑1 (MQ=60)
AAGATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACT > SRR4302536.4042200/1‑94 (MQ=60)
AAGATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACT > SRR4302536.693272/1‑94 (MQ=60)
AAGATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACT < SRR4302536.5907265/94‑1 (MQ=60)
AAGATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACT > SRR4302536.2825063/1‑94 (MQ=60)
AGATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTC > SRR4302536.836598/1‑94 (MQ=60)
GATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCG < SRR4302536.1634959/94‑1 (MQ=60)
ATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCCAGCTTCACTACTCGT > SRR4302536.3768646/1‑94 (MQ=60)
TGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTG < SRR4302536.5252681/94‑1 (MQ=60)
TGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTG < SRR4302536.6848546/94‑1 (MQ=60)
TGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTG < SRR4302536.6818431/94‑1 (MQ=60)
GTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGC > SRR4302536.1696437/1‑94 (MQ=60)
TACTTCATTGTAAATCAGCCCCTTCAGCTCCATGAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCT < SRR4302536.5463819/94‑1 (MQ=60)
TACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCT > SRR4302536.1771128/1‑94 (MQ=60)
CTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAA < SRR4302536.3674816/94‑1 (MQ=60)
TCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATT < SRR4302536.1449442/94‑1 (MQ=60)
CATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTT > SRR4302536.4374139/1‑94 (MQ=60)
CATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTC > SRR4302536.1252293/1‑94 (MQ=60)
CATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTC > SRR4302536.3264359/1‑94 (MQ=60)
TTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTT > SRR4302536.2975810/1‑94 (MQ=60)
TTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTT < SRR4302536.297133/94‑1 (MQ=60)
GTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCT < SRR4302536.6732362/94‑1 (MQ=60)
GTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCT < SRR4302536.641069/94‑1 (MQ=60)
TAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTGCTCGTGCTAATTCTTCTG < SRR4302536.2082344/94‑1 (MQ=60)
TAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTG < SRR4302536.3623223/94‑1 (MQ=60)
AATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCT > SRR4302536.3676840/1‑94 (MQ=60)
AATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCT < SRR4302536.2854353/94‑1 (MQ=60)
AATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCT < SRR4302536.769493/94‑1 (MQ=60)
AATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCT < SRR4302536.5881506/94‑1 (MQ=60)
ATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTT > SRR4302536.3387740/1‑94 (MQ=60)
TCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTT > SRR4302536.3645870/1‑94 (MQ=60)
AGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTAC > SRR4302536.664968/1‑94 (MQ=60)
GCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACA < SRR4302536.3192891/94‑1 (MQ=60)
GCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACA < SRR4302536.2840105/94‑1 (MQ=60)
GCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACA < SRR4302536.5015571/94‑1 (MQ=60)
GCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAATAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACA < SRR4302536.1647462/94‑1 (MQ=60)
CCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACAC > SRR4302536.2458119/1‑94 (MQ=60)
CCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACAC < SRR4302536.5386158/94‑1 (MQ=60)
CCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACG < SRR4302536.2937634/94‑1 (MQ=60)
CCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACG < SRR4302536.1618208/94‑1 (MQ=60)
CCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACG < SRR4302536.5263556/94‑1 (MQ=60)
CCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGACCTTCACTACTCGTGCTAATTCTTCTGCgttaaacga > SRR4302536.4067011/1‑85 (MQ=60)
CCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGCAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGG > SRR4302536.5178667/1‑94 (MQ=60)
CTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGC > SRR4302536.5593957/1‑94 (MQ=60)
CTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGC < SRR4302536.2555844/94‑1 (MQ=60)
CTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGC < SRR4302536.5974243/94‑1 (MQ=60)
CTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGC > SRR4302536.2228537/1‑94 (MQ=60)
TTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCG < SRR4302536.2862039/94‑1 (MQ=60)
CAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCG > SRR4302536.6907118/1‑94 (MQ=60)
CAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCG > SRR4302536.6702887/1‑94 (MQ=60)
AGCTCCATCAAATGTCGCTGTCCCGGCGGGGCAGTAATGCCCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGT < SRR4302536.5327699/94‑1 (MQ=60)
AGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGT > SRR4302536.31610/1‑94 (MQ=60)
AGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGT > SRR4302536.2721382/1‑94 (MQ=60)
AGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGT > SRR4302536.3741513/1‑94 (MQ=60)
GCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTA < SRR4302536.2097868/94‑1 (MQ=60)
CTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAA > SRR4302536.1019210/1‑94 (MQ=60)
CTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAA > SRR4302536.764976/1‑94 (MQ=60)
TCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAA > SRR4302536.3570363/1‑94 (MQ=60)
CCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAAT < SRR4302536.3329314/94‑1 (MQ=60)
CCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAAT < SRR4302536.3745121/94‑1 (MQ=60)
CATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTCCTCGTGCTAATTCTTCTGCTTTACACGGCGCGCAAATA > SRR4302536.1921091/1‑94 (MQ=60)
CATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATC > SRR4302536.1859951/1‑94 (MQ=60)
CATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATA < SRR4302536.1487176/94‑1 (MQ=60)
CATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATA > SRR4302536.2466270/1‑94 (MQ=60)
ATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATAC < SRR4302536.2413296/94‑1 (MQ=60)
TCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACG > SRR4302536.4702606/1‑94 (MQ=60)
AAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACTGCGCGTAAATACGTA > SRR4302536.1724543/1‑94 (MQ=60)
AATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTAT < SRR4302536.3504128/94‑1 (MQ=60)
AATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTAT < SRR4302536.3880800/94‑1 (MQ=60)
AATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTGCTGCTTTACACGGCGCGTAAATACGTAT < SRR4302536.458211/94‑1 (MQ=60)
ATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATT > SRR4302536.5528029/1‑94 (MQ=60)
GTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTAT < SRR4302536.621178/94‑1 (MQ=60)
GTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTAT > SRR4302536.1466430/1‑94 (MQ=60)
TCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATG < SRR4302536.5505613/94‑1 (MQ=60)
CGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGG > SRR4302536.743869/1‑94 (MQ=60)
CGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGG < SRR4302536.4448136/94‑1 (MQ=60)
CGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGG > SRR4302536.4092812/1‑94 (MQ=60)
CGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCG < SRR4302536.4418220/94‑1 (MQ=60)
GGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGT > SRR4302536.2568309/1‑94 (MQ=60)
GTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTC < SRR4302536.6788815/94‑1 (MQ=60)
GTCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCATAAATACGTATTATGGCGTC < SRR4302536.6738880/94‑1 (MQ=60)
TCCCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCC < SRR4302536.3121065/94‑1 (MQ=60)
CCGGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCAT < SRR4302536.1327830/94‑1 (MQ=60)
GGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATAC < SRR4302536.4200786/94‑1 (MQ=60)
GGCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATAC > SRR4302536.1266710/1‑94 (MQ=60)
GCGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACT < SRR4302536.5454941/94‑1 (MQ=60)
CGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTG > SRR4302536.1336734/1‑94 (MQ=60)
CGTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGGAAATACGTATTATGGCGTCCATACTG > SRR4302536.5991180/1‑94 (MQ=60)
GTGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGG > SRR4302536.543137/1‑94 (MQ=60)
TGGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGT < SRR4302536.4072819/94‑1 (MQ=60)
GGCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTA < SRR4302536.6131232/94‑1 (MQ=60)
GCAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTAT < SRR4302536.4788420/94‑1 (MQ=60)
CAGTAATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATC < SRR4302536.2360648/94‑1 (MQ=60)
AATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAA > SRR4302536.1347220/1‑94 (MQ=60)
ATGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAA < SRR4302536.6181704/94‑1 (MQ=60)
TGACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAA > SRR4302536.5301020/1‑94 (MQ=60)
GACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAAC > SRR4302536.5075971/1‑94 (MQ=60)
ACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAACG < SRR4302536.4652205/94‑1 (MQ=60)
ACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAACG > SRR4302536.3551455/1‑94 (MQ=60)
ACCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAACG > SRR4302536.2835398/1‑94 (MQ=60)
CCCAGCCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAACGG < SRR4302536.4306173/94‑1 (MQ=60)
CCGCCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAACGGCAAAC < SRR4302536.4727693/94‑1 (MQ=60)
CCGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAACGGCAAACGGT > SRR4302536.179268/1‑94 (MQ=60)
CGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAACGGCAAACGGTG > SRR4302536.1163486/1‑94 (MQ=60)
CGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAACGGCAAACGGTG < SRR4302536.1223921/94‑1 (MQ=60)
CGAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAACGGCAAACGGTG > SRR4302536.510239/1‑94 (MQ=60)
GAGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAACGGCAAACGGTGG > SRR4302536.2168657/1‑94 (MQ=60)
AGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAACGGCAAACGGTGGC > SRR4302536.873672/1‑94 (MQ=60)
AGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAACGGCAAACGGTGGC < SRR4302536.4591381/94‑1 (MQ=60)
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TGAGGTGCATGAAGATGTACTTCATTGTAAATCAGCCCCTTCAGCTCCATCAAATGTCGCGGTCCCGGCGTGGCAGTAATGACCCAGCCGCCGGGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGTCCATACTGGTATCGGAAAACGGCAAACGGTGGC > NC_000913/1904483‑1904669
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
