Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,026,680 |
T→C |
T237A (ACG→GCG) |
yedI ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,026,680 | 0 | T | C | 100.0%
| 686.3
/ NA
| 213 | T237A (ACG→GCG) | yedI | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (93/120); total (93/120) |
Only 100 of 218 total aligned reads displayed.
TTTGCTGCCCGGCGAAATGTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGTGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAGCGCGCTGGATTTTTCCG > NC_000913/2026590‑2026769
|
tttGCTGCCCGGCGAAATGTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAgcgcgc > 2:1691822/1‑93 (MQ=255)
tgctgcCCGGCGAAATGTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCg > 2:2543492/1‑93 (MQ=255)
gctgcCCGGCGAAATGTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGa > 1:272052/1‑93 (MQ=255)
tgcCCGGCGAAATGTTCAATGGCGTGATGCAGCGGCGCAATTGCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACa > 2:3562756/1‑93 (MQ=255)
tgcCCGGCGAAATGTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACa > 1:3141498/1‑93 (MQ=255)
gcCCGGCGAAATGTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACaa > 1:311402/1‑93 (MQ=255)
ccGGCGAAATGTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATc > 1:5615427/1‑93 (MQ=255)
cGGCGAAATGTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCg < 2:51695/93‑1 (MQ=255)
ggCGAAATGTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGa > 2:5893806/1‑93 (MQ=255)
ggCGAAATGTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGa > 2:1874766/1‑93 (MQ=255)
ggAAATGTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATa < 2:1548967/92‑1 (MQ=255)
aaaTGTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCCCCGACAATCGATaag > 2:1386748/1‑92 (MQ=255)
gTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCtt < 1:1128535/93‑1 (MQ=255)
gTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCtt < 2:2032626/93‑1 (MQ=255)
tCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTtc < 1:2300801/93‑1 (MQ=255)
tCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTtc > 2:3085177/1‑93 (MQ=255)
tCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTtc > 1:3027455/1‑93 (MQ=255)
aTGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTtcatc > 2:794456/1‑93 (MQ=255)
tGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTtcatca < 2:5363860/93‑1 (MQ=255)
ggCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAg > 2:2426134/1‑93 (MQ=255)
cGTGATGCAGCGCCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGcc < 1:157448/93‑1 (MQ=255)
gTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCa < 1:4460430/93‑1 (MQ=255)
tGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAg < 1:544489/93‑1 (MQ=255)
gATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAgg < 1:102118/93‑1 (MQ=255)
gATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAgg < 1:6271003/93‑1 (MQ=255)
gATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAgg < 1:2208387/93‑1 (MQ=255)
aTGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAggg > 2:3863078/1‑93 (MQ=255)
aTGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAggg < 2:6347528/93‑1 (MQ=255)
tGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGgc < 1:151385/93‑1 (MQ=255)
gcggcgCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGa > 2:1785260/1‑93 (MQ=255)
gcgcAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATaa > 1:6231335/1‑93 (MQ=255)
gcgcAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATaa > 1:5201331/1‑93 (MQ=255)
cgcAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAAt < 2:3824849/93‑1 (MQ=255)
cgcAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAAt < 2:2291299/93‑1 (MQ=255)
gcAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATTGTCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCCGGGCGCGATAATc > 1:5806237/1‑93 (MQ=255)
gcAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATc > 2:6440579/1‑93 (MQ=255)
cAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCa > 2:432109/1‑93 (MQ=255)
ttCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATa < 1:5996724/93‑1 (MQ=255)
ttCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATa < 2:1260974/93‑1 (MQ=255)
ttCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATa < 1:4220855/93‑1 (MQ=255)
tCCATGTACCCCAGTCCCACCGCCGACGAGGAACATCGCCCGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATaa < 2:1516489/93‑1 (MQ=255)
tCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATaa < 2:3026585/93‑1 (MQ=255)
tCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATaa > 2:4547512/1‑93 (MQ=255)
ccATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATACTCAATAAc < 1:6564604/93‑1 (MQ=255)
ccATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAAc < 2:5841382/93‑1 (MQ=255)
ccATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAAc < 2:595070/93‑1 (MQ=255)
cATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAAcc > 1:4904160/1‑93 (MQ=255)
cATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAAcc > 1:4730999/1‑93 (MQ=255)
cATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAAcc > 1:1254351/1‑93 (MQ=255)
aTGTGCCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAAccc < 1:2597632/93‑1 (MQ=255)
aTGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAAccc < 2:6550646/93‑1 (MQ=255)
ttACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCtt < 1:3007883/92‑1 (MQ=255)
gTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCtt > 1:4286075/1‑93 (MQ=255)
gTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCtt < 2:510202/93‑1 (MQ=255)
gTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCtt > 2:6278009/1‑93 (MQ=255)
gTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCtt < 2:1963278/93‑1 (MQ=255)
gTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCtt < 1:5506790/93‑1 (MQ=255)
gTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCtt < 1:1978325/93‑1 (MQ=255)
tACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCttt > 1:2449072/1‑93 (MQ=255)
tACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCttt < 1:6359562/93‑1 (MQ=255)
tACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCttt < 1:6678716/93‑1 (MQ=255)
aCCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGAGCGATAATCAATAACCCTTTa > 2:2691865/1‑93 (MQ=255)
cacaATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTAcc < 1:2055855/93‑1 (MQ=255)
acaATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCt < 2:4653896/93‑1 (MQ=255)
acaATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCt > 1:4038834/1‑93 (MQ=255)
aaTCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTaa > 2:1049139/1‑93 (MQ=255)
aaTCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTaa < 2:4106077/93‑1 (MQ=255)
aTCCCACCGCCGACGAGGAACATCGCCAGCGCTCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAAt < 1:3202066/93‑1 (MQ=255)
aTCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAAt > 1:5292213/1‑93 (MQ=255)
aTCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAAt < 2:4821936/93‑1 (MQ=255)
aTCCCACCGCCGACGAGGAACATCGCCAGCGCCCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAAt > 2:4263946/1‑93 (MQ=255)
cccACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGc < 2:436175/93‑1 (MQ=255)
ccACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGcc < 1:4541401/93‑1 (MQ=255)
ccACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGcc < 2:5801463/93‑1 (MQ=255)
cACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCt < 1:4840161/93‑1 (MQ=255)
aCCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTg > 1:3662414/1‑93 (MQ=255)
ccgccgACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGc > 2:1744270/1‑93 (MQ=255)
ccgccgACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGc > 2:6434998/1‑93 (MQ=255)
gccgACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCAt < 2:3974249/93‑1 (MQ=255)
gccgACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCAt < 1:1738390/93‑1 (MQ=255)
gccgACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCAt < 1:1142406/93‑1 (MQ=255)
ccgACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATc < 2:6684033/93‑1 (MQ=255)
ccgACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATc < 1:3631582/93‑1 (MQ=255)
gacgaGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAg > 2:5315471/1‑93 (MQ=255)
acgaGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAgc < 2:1100226/93‑1 (MQ=255)
acgaGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAgc < 1:5337297/93‑1 (MQ=255)
cgaGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAgcg < 2:3291589/93‑1 (MQ=255)
gaGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAgcgc < 1:3991305/93‑1 (MQ=255)
gaGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAgcgc < 1:4102751/93‑1 (MQ=255)
aGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCCTCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAgcgcg > 1:493797/1‑93 (MQ=255)
aGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAgcgcg > 2:5539834/1‑93 (MQ=255)
ggAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAgcgcgc > 1:3700814/1‑93 (MQ=255)
ggAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAgcgcgc > 2:503866/1‑93 (MQ=255)
ggAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAgcgcgc < 2:2910541/93‑1 (MQ=255)
ggAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAgcgcgc > 1:240480/1‑93 (MQ=255)
gAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAGCGCGCt > 2:524446/1‑93 (MQ=255)
gAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAGCGCGCt < 2:5592659/93‑1 (MQ=255)
aCATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAGCGCGCTgg > 1:1869492/1‑93 (MQ=255)
cATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAGCGCGCTGGa > 1:1447419/1‑93 (MQ=255)
gcgcgcCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAGCGCGCTGGATTTTTCCg < 1:3409071/93‑1 (MQ=255)
|
TTTGCTGCCCGGCGAAATGTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGTGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAGCGCGCTGGATTTTTCCG > NC_000913/2026590‑2026769
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTGCTGCCCGGCGAAATGTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGTGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAGCGCGCTGGATTTTTCCGCCAG > NC_000913/2026591‑2026773
|
TTGCTGCCCGGCGAAATGTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCG < SRR4302536.6417185/94‑1 (MQ=60)
TGCTGCCCGGCGAAATGTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGA > SRR4302536.279294/1‑94 (MQ=60)
CTGCCCGGCGAAATGTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACA > SRR4302536.3233473/1‑94 (MQ=60)
TGCCCGGCGAAATGTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAA > SRR4302536.319659/1‑94 (MQ=60)
GCCCGGCGAAATGTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAAT < SRR4302536.5173816/94‑1 (MQ=60)
CCCGGCGAAATGTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATC > SRR4302536.5782222/1‑94 (MQ=60)
GGCGAAATGTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGAT > SRR4302536.3957066/1‑94 (MQ=60)
CGAAATGTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAA > SRR4302536.2905399/1‑94 (MQ=60)
CGAAATGTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAA > SRR4302536.4786263/1‑94 (MQ=60)
GAAATGTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAAC > SRR4302536.53538/1‑94 (MQ=60)
GAAATGTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAAC < SRR4302536.3256989/94‑1 (MQ=60)
AATGTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGC > SRR4302536.5461838/1‑94 (MQ=60)
ATGTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCT < SRR4302536.5647954/94‑1 (MQ=60)
TGTTCAATGGCGTGATGCAGCGGCCCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTT < SRR4302536.308783/94‑1 (MQ=60)
GTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTT < SRR4302536.3786481/94‑1 (MQ=60)
GTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTT < SRR4302536.4899940/94‑1 (MQ=60)
GTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTT < SRR4302536.1162453/94‑1 (MQ=60)
TTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTC > SRR4302536.3116415/1‑94 (MQ=60)
TCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCA < SRR4302536.2370603/94‑1 (MQ=60)
CAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCAT > SRR4302536.3181865/1‑94 (MQ=60)
CAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCAT < SRR4302536.3767869/94‑1 (MQ=60)
AATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATC > SRR4302536.3474562/1‑94 (MQ=60)
ATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCA < SRR4302536.4199747/94‑1 (MQ=60)
CGTGATGCAGCGCCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCA < SRR4302536.161520/94‑1 (MQ=60)
GTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAG < SRR4302536.4594470/94‑1 (MQ=60)
TGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGG < SRR4302536.4945525/94‑1 (MQ=60)
TGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGG > SRR4302536.1532111/1‑94 (MQ=60)
TGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGG < SRR4302536.558384/94‑1 (MQ=60)
TGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGG < SRR4302536.5880430/94‑1 (MQ=60)
GATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGG < SRR4302536.6457843/94‑1 (MQ=60)
GATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGG < SRR4302536.104851/94‑1 (MQ=60)
GATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGG > SRR4302536.5006686/1‑94 (MQ=60)
GATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGG < SRR4302536.5076581/94‑1 (MQ=60)
GATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGG < SRR4302536.5501354/94‑1 (MQ=60)
GATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGG < SRR4302536.2275072/94‑1 (MQ=60)
ATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGC < SRR4302536.1604456/94‑1 (MQ=60)
TGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCG < SRR4302536.155307/94‑1 (MQ=60)
CAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCG < SRR4302536.445846/94‑1 (MQ=60)
CGGCGCAATTCCATGTACCACAATCCCCCCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATA < SRR4302536.3596672/94‑1 (MQ=60)
GGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAA > SRR4302536.6416993/1‑94 (MQ=60)
GGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAA > SRR4302536.5356397/1‑94 (MQ=60)
AGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATTGTCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCCGGGCGCGATAATC > SRR4302536.5979159/1‑94 (MQ=60)
GCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCA < SRR4302536.1167229/94‑1 (MQ=60)
CAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAA > SRR4302536.4345009/1‑94 (MQ=60)
AATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAAT > SRR4302536.6292780/1‑94 (MQ=60)
AATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAAT > SRR4302536.1657026/1‑94 (MQ=60)
ATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATA < SRR4302536.2339464/94‑1 (MQ=60)
ATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATA > SRR4302536.1080965/1‑94 (MQ=60)
TTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAA < SRR4302536.6175487/94‑1 (MQ=60)
TTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAA < SRR4302536.4346429/94‑1 (MQ=60)
TTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAA > SRR4302536.2631821/1‑94 (MQ=60)
TCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAAC < SRR4302536.1022323/94‑1 (MQ=60)
CCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATACTCAATAACC < SRR4302536.6760001/94‑1 (MQ=60)
CCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACC > SRR4302536.5051608/1‑94 (MQ=60)
CCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACC > SRR4302536.4873360/1‑94 (MQ=60)
CCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACC < SRR4302536.6026906/94‑1 (MQ=60)
CCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACC > SRR4302536.1292000/1‑94 (MQ=60)
ATGTGCCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCG < SRR4302536.2675650/94‑1 (MQ=60)
ATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCT < SRR4302536.4147932/94‑1 (MQ=60)
ATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCT > SRR4302536.1889479/1‑94 (MQ=60)
TGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTT > SRR4302536.4414089/1‑94 (MQ=60)
TTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTT < SRR4302536.3096309/94‑1 (MQ=60)
GTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTT > SRR4302536.2523056/1‑94 (MQ=60)
GTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTT < SRR4302536.5671067/94‑1 (MQ=60)
GTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTT < SRR4302536.2037814/94‑1 (MQ=60)
GTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTT < SRR4302536.2209824/94‑1 (MQ=60)
TACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTA < SRR4302536.2028112/94‑1 (MQ=60)
TACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTA < SRR4302536.6877136/94‑1 (MQ=60)
TACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTA < SRR4302536.6549032/94‑1 (MQ=60)
CCACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACC < SRR4302536.2417455/94‑1 (MQ=60)
CACAATCCCCCCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGGTAATCAATAACCCTTTACCT < SRR4302536.6758873/94‑1 (MQ=60)
CACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCT > SRR4302536.1310433/1‑94 (MQ=60)
CACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCT < SRR4302536.2117765/94‑1 (MQ=60)
CACAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCT > SRR4302536.4158588/1‑94 (MQ=60)
CAATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAA < SRR4302536.4176641/94‑1 (MQ=60)
AATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAAT > SRR4302536.5450024/1‑94 (MQ=60)
AATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAAT > SRR4302536.3045845/1‑94 (MQ=60)
AATCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAAT < SRR4302536.5701226/94‑1 (MQ=60)
ATCCCACCGCCGACGAGGAACATCGCCAGCGCTCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATG < SRR4302536.3295971/94‑1 (MQ=60)
TCCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGAGCGATAATCAATAACCCTTTACCTAATGC > SRR4302536.1209892/1‑94 (MQ=60)
CCCACCGCGGAGGAGGAACACCGCCAGCGCGCAGCCAAGCGATAACGCTTTCATCAGCCAGCGTGCGATAATCAATATCCCTTTTCCTAACGCC < SRR4302536.753486/94‑1 (MQ=25)
CCCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCC > SRR4302536.2071567/1‑94 (MQ=60)
CCACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCT < SRR4302536.4677572/94‑1 (MQ=60)
CACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTG < SRR4302536.4985835/94‑1 (MQ=60)
CACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTG > SRR4302536.2368335/1‑94 (MQ=60)
CACCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTG > SRR4302536.3771904/1‑94 (MQ=60)
CCGCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCA < SRR4302536.464382/94‑1 (MQ=60)
GCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATC < SRR4302536.1788538/94‑1 (MQ=60)
GCCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATC < SRR4302536.1176761/94‑1 (MQ=60)
CCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCA < SRR4302536.3205267/94‑1 (MQ=60)
CCGACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCA < SRR4302536.3740209/94‑1 (MQ=60)
GACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAGC > SRR4302536.5480315/1‑94 (MQ=60)
ACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAGCG < SRR4302536.5496752/94‑1 (MQ=60)
ACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAGCG < SRR4302536.6867318/94‑1 (MQ=60)
ACGAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAGCG < SRR4302536.4378644/94‑1 (MQ=60)
GAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCCTCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAGCGCG > SRR4302536.506563/1‑94 (MQ=60)
GAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAGCGCG < SRR4302536.4224470/94‑1 (MQ=60)
GAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAGCGCG > SRR4302536.1605671/1‑94 (MQ=60)
GAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAGCGCG < SRR4302536.4109758/94‑1 (MQ=60)
GAGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAACCAGGGCGCGATAATCAATAACCCTTTACCTAATGACTGCATCAACGCG > SRR4302536.618254/1‑94 (MQ=60)
AGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAGCGCGC > SRR4302536.3811479/1‑94 (MQ=60)
AGGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAGCGCGC > SRR4302536.246879/1‑94 (MQ=60)
GGAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAGCGCGCT > SRR4302536.2483090/1‑94 (MQ=60)
GAACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAGCGCGCTG > SRR4302536.6524309/1‑94 (MQ=60)
AACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAGCGCGCTGG > SRR4302536.1925762/1‑94 (MQ=60)
ACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAGCGCGCTGGA > SRR4302536.3675751/1‑94 (MQ=60)
ACATCGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAGCGCGCTGGA > SRR4302536.1490307/1‑94 (MQ=60)
CGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAGCGCGCTGGATTTT > SRR4302536.2720694/1‑94 (MQ=60)
CGCCAGCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCATGCATCAGCGCGCTGGATTTT > SRR4302536.909568/1‑94 (MQ=60)
GCGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAGCGCGCTGGATTTTTCCGC < SRR4302536.3510476/94‑1 (MQ=60)
CGCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAGCGCGCTGGATTTTTCCGCC < SRR4302536.4099526/94‑1 (MQ=60)
GCGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAGCGCGCTGGATTTTTCCGCCA < SRR4302536.3636903/94‑1 (MQ=60)
CGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAGCGCGCTGGATTTTTCCGCCAG > SRR4302536.861529/1‑94 (MQ=60)
|
TTGCTGCCCGGCGAAATGTTCAATGGCGTGATGCAGCGGCGCAATTCCATGTACCACAATCCCACCGCCGACGAGGAACATCGCCAGCGTGCCGACAATCGATAACGCTTTCATCAGCCAGGGCGCGATAATCAATAACCCTTTACCTAATGCCTGCATCAGCGCGCTGGATTTTTCCGCCAG > NC_000913/2026591‑2026773
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
