Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,028,708 |
A→G |
V78A (GTG→GCG) |
vsr ← |
DNA mismatch endonuclease |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,028,708 | 0 | A | G | 100.0%
| 771.2
/ NA
| 235 | V78A (GTG→GCG) | vsr | DNA mismatch endonuclease |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (134/101); total (134/101) |
Only 100 of 244 total aligned reads displayed.
CCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGT > NC_000913/2028618‑2028797
|
cGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCtt < 1:674183/93‑1 (MQ=255)
cGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCtt < 2:5187036/93‑1 (MQ=255)
cGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCtt > 2:2200859/1‑93 (MQ=255)
gAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCttt > 2:2318855/1‑93 (MQ=255)
aGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGTCAGAACTCGGTTCGAGTCGCAGGCGCCTTa > 2:5255332/1‑93 (MQ=255)
aGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTa < 1:5522312/93‑1 (MQ=255)
gTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTaa > 2:4792434/1‑93 (MQ=255)
gTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTaa > 2:2416217/1‑93 (MQ=255)
gTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGACAGAACTCGGTTCGAGTCGCAGGCGCTTTaa > 1:6660765/1‑93 (MQ=255)
ttCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTaaa > 2:4605489/1‑93 (MQ=255)
ccTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACa > 1:792488/1‑93 (MQ=255)
cTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAg > 1:510101/1‑93 (MQ=255)
gCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGAt > 1:1709349/1‑93 (MQ=255)
gCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGAt < 2:1302442/93‑1 (MQ=255)
gCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGAt < 2:3791154/93‑1 (MQ=255)
cAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATa < 2:3261103/93‑1 (MQ=255)
cAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATa < 2:6647177/93‑1 (MQ=255)
aaGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAg < 2:4362082/93‑1 (MQ=255)
aGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGc > 2:1625682/1‑93 (MQ=255)
gCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCa < 2:6362673/93‑1 (MQ=255)
cGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAg < 2:6533638/93‑1 (MQ=255)
cGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAg > 2:938564/1‑93 (MQ=255)
gACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGt > 1:4019332/1‑93 (MQ=255)
gACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGt < 2:2673883/93‑1 (MQ=255)
gACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGt > 1:317588/1‑93 (MQ=255)
cTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGtga > 2:2997127/1‑93 (MQ=255)
gATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGtgatg > 2:6616377/1‑93 (MQ=255)
atatCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGtgatga > 2:5744655/1‑93 (MQ=255)
tCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGtgatgatga > 1:6425674/1‑93 (MQ=255)
cgcgGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTgatgatgat < 1:1191606/93‑1 (MQ=255)
gcggcgATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGatgatgatg > 2:4903443/1‑93 (MQ=255)
gcgATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCa > 2:4560153/1‑93 (MQ=255)
gcgATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCa < 2:1927727/93‑1 (MQ=255)
gATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGa < 2:5804801/93‑1 (MQ=255)
aTCGCGCTCAACATTTTTACCTATCTTCTCCAGACAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGaa > 1:5502065/1‑93 (MQ=255)
cgcgCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAagc < 2:3426148/93‑1 (MQ=255)
cgcgCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAagc > 2:2897211/1‑93 (MQ=255)
gcgcTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAagca < 1:4426643/93‑1 (MQ=255)
gcgcTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTCCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAagca > 2:4703807/1‑93 (MQ=255)
cgcTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAagcag < 1:2140201/93‑1 (MQ=255)
gcTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAagcagc > 1:5400705/1‑93 (MQ=255)
gcTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAagcagc > 1:3605800/1‑93 (MQ=255)
cTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGcc > 2:3184745/1‑93 (MQ=255)
tCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCa > 1:1006979/1‑93 (MQ=255)
tCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCa > 1:3209451/1‑93 (MQ=255)
aaCATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATg > 1:4183172/1‑93 (MQ=255)
aCATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATgg < 2:3141813/93‑1 (MQ=255)
tttttACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTa > 2:5325550/1‑93 (MQ=255)
tttttACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTa > 2:2149214/1‑93 (MQ=255)
tttttACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTa > 2:2866542/1‑93 (MQ=255)
ttttACCTATCTTCTCCAGCCAGAACGCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTaa < 2:1873617/93‑1 (MQ=255)
ttACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAat < 2:6090435/93‑1 (MQ=255)
ttACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAat < 1:426240/93‑1 (MQ=255)
ccTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATc > 1:1499628/1‑93 (MQ=255)
ccTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATc < 2:1773123/93‑1 (MQ=255)
tATCTTCTCCAGGCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGAGATGATGATGCCAGAAGCAGCCATGGGTAAATATCAc > 1:3682365/1‑93 (MQ=255)
aTCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACg > 1:4809309/1‑93 (MQ=255)
aTCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACg < 1:4872573/93‑1 (MQ=255)
tcttctCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGc < 1:2543452/93‑1 (MQ=255)
tcttctCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGc > 2:4989638/1‑93 (MQ=255)
cttctCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCa < 2:2231969/93‑1 (MQ=255)
ttctCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAg > 2:912603/1‑93 (MQ=255)
ttctCCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAg > 1:3477845/1‑93 (MQ=255)
tctcCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCGATGGGTAAATATCACGCAGc > 2:4436891/1‑93 (MQ=255)
tctcCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGc < 1:4583923/93‑1 (MQ=255)
tctcCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGc < 2:318822/93‑1 (MQ=255)
tctcCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGc > 1:5009402/1‑93 (MQ=255)
tcCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGa > 1:5713323/1‑93 (MQ=255)
tcCAGCCAGAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGa > 2:5406753/1‑93 (MQ=255)
ccagccagAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGat > 2:5512290/1‑93 (MQ=255)
cagccagAACTCGGTCCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATCCCAGAAGCAGCCATGGGTAAATATCACGCAGCGata < 1:6364789/93‑1 (MQ=255)
agccagAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGatat > 2:2641751/1‑93 (MQ=255)
agccagAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGatat > 1:3059896/1‑93 (MQ=255)
gccagAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATAtt > 1:6222517/1‑93 (MQ=255)
gccagAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATAtt > 1:1269094/1‑93 (MQ=255)
gccagAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATAtt > 1:2920122/1‑93 (MQ=255)
agAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATtcat > 1:5287205/1‑93 (MQ=255)
gAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATtcatc < 2:5602702/93‑1 (MQ=255)
gAACTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATtcatc < 1:433365/93‑1 (MQ=255)
aaCTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATtcatca > 1:2034560/1‑93 (MQ=255)
aCTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCaa > 2:4130171/1‑93 (MQ=255)
aCTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCaa < 1:4166516/93‑1 (MQ=255)
aCTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCaa < 2:408357/93‑1 (MQ=255)
cTCGGTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAAc > 1:6021697/1‑93 (MQ=255)
cagTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATAATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGa < 2:1097563/91‑1 (MQ=255)
gTTCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACa < 2:6000412/93‑1 (MQ=255)
ttCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACaa < 2:3862701/93‑1 (MQ=255)
ttCGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACaa > 2:2881995/1‑93 (MQ=255)
cGAGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACaaaa < 2:3648258/93‑1 (MQ=255)
aGTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATc > 2:2007009/1‑93 (MQ=255)
gTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACACAATcc > 2:4205625/1‑93 (MQ=255)
gTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATcc > 2:5090738/1‑93 (MQ=255)
gTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATcc > 1:6164369/1‑93 (MQ=255)
gTCGCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATcc > 2:1189389/1‑93 (MQ=255)
ttaGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACTACAAAATCCGGa < 1:5980519/91‑1 (MQ=255)
gCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGa < 2:3958804/93‑1 (MQ=255)
gCAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGa > 2:874339/1‑93 (MQ=255)
cAGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGAc < 2:725906/93‑1 (MQ=255)
aGGCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACg > 1:4700418/1‑93 (MQ=255)
ggCGCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGt < 1:3413523/93‑1 (MQ=255)
|
CCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGT > NC_000913/2028618‑2028797
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCAC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGG > NC_000913/2028615‑2028801
|
CAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTCCCTATCTTCTCCAGCCAGATCTCGGTTCGAGTCGCAGGCG < SRR4302536.5418907/94‑1 (MQ=60)
CAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCG < SRR4302536.372812/94‑1 (MQ=60)
CAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCG > SRR4302536.2317361/1‑94 (MQ=60)
AGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC > SRR4302536.3105365/1‑94 (MQ=60)
AGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC > SRR4302536.2030362/1‑94 (MQ=60)
GCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑T > SRR4302536.5404549/1‑94 (MQ=60)
CGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTT < SRR4302536.693916/94‑1 (MQ=60)
CGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGGTCGCGTCGCAGGCGC‑TTT > SRR4302536.3699802/1‑94 (MQ=60)
GAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTA > SRR4302536.3286500/1‑94 (MQ=60)
AGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAA < SRR4302536.5686976/94‑1 (MQ=60)
AGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAA > SRR4302536.567571/1‑94 (MQ=60)
AGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGACAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAA > SRR4302536.6858715/1‑94 (MQ=60)
TTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAAC < SRR4302536.1168976/94‑1 (MQ=60)
TCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACA < SRR4302536.129107/94‑1 (MQ=60)
TCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACA > SRR4302536.815720/1‑94 (MQ=60)
TCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGACAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACA > SRR4302536.618726/1‑94 (MQ=60)
CCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAG > SRR4302536.523180/1‑94 (MQ=60)
TGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGAT > SRR4302536.1758818/1‑94 (MQ=60)
TGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGAT < SRR4302536.3638813/94‑1 (MQ=60)
GCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTGCCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATA < SRR4302536.4987141/94‑1 (MQ=60)
CAAGCGACTGATATGTCGGCTATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAG < SRR4302536.514710/94‑1 (MQ=60)
CAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAG < SRR4302536.4379101/94‑1 (MQ=60)
CAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAG > SRR4302536.4313133/1‑94 (MQ=60)
AGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCA > SRR4302536.6379367/1‑94 (MQ=60)
GCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAG < SRR4302536.3954847/94‑1 (MQ=60)
CGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGT > SRR4302536.6297274/1‑94 (MQ=60)
CGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGT > SRR4302536.4138576/1‑94 (MQ=60)
CGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGT > SRR4302536.326008/1‑94 (MQ=60)
GACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTG > SRR4302536.4419116/1‑94 (MQ=60)
CTGATATCGCGGCGATCGCGCTCAACATTTTTCCCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGAT < SRR4302536.3519254/94‑1 (MQ=60)
CTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGAT > SRR4302536.6330362/1‑94 (MQ=60)
CTGATATCGCGGCGATCGCGCTCAACATTTTTAACTATCTTCTCCAGCCAGAACTCGGCTCGAGTCGCAGGCGCGTTTAAAC‑GATAGAAGTGAT > SRR4302536.6863706/1‑94 (MQ=60)
GATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGA < SRR4302536.166439/94‑1 (MQ=60)
TATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATG < SRR4302536.4298653/94‑1 (MQ=60)
ATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGA > SRR4302536.6617730/1‑94 (MQ=60)
TCGCGGCGATCGCGCTCAACATTTTTACCTAGCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGAT < SRR4302536.3761226/94‑1 (MQ=60)
CGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATG < SRR4302536.1227438/94‑1 (MQ=60)
CGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATG > SRR4302536.2804113/1‑94 (MQ=60)
CGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGA > SRR4302536.5980054/1‑94 (MQ=60)
CGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGA > SRR4302536.4790480/1‑94 (MQ=60)
GATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAA > SRR4302536.835635/1‑94 (MQ=60)
GATCGCGCTCAACATTTTTACCTATCTTCTCCAGACAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAA > SRR4302536.5666218/1‑94 (MQ=60)
ATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAG < SRR4302536.5571949/94‑1 (MQ=60)
GCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAG < SRR4302536.3230068/94‑1 (MQ=60)
GCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAG < SRR4302536.4559279/94‑1 (MQ=60)
CGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGC > SRR4302536.3713625/1‑94 (MQ=60)
CGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGC > SRR4302536.5562029/1‑94 (MQ=60)
CGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGC < SRR4302536.2204451/94‑1 (MQ=60)
CGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGC > SRR4302536.6478635/1‑94 (MQ=60)
GCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCC > SRR4302536.1460429/1‑94 (MQ=60)
GCCCAACATTTTTACCTATCTTCTCCAGACAGAACTCGGTTCGAGGCGCAAGCGC‑TTTAAACAGATAGCAGTGATGGTGATGCCAGAAGCAGCC > SRR4302536.1795088/1‑94 (MQ=60)
CTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCA > SRR4302536.3303601/1‑94 (MQ=60)
CTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCA > SRR4302536.5566735/1‑94 (MQ=60)
CTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCA > SRR4302536.1036681/1‑94 (MQ=60)
CAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATG > SRR4302536.4307443/1‑94 (MQ=60)
AACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGG > SRR4302536.2174779/1‑94 (MQ=60)
ACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGG > SRR4302536.6624272/1‑94 (MQ=60)
CATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGT < SRR4302536.400253/94‑1 (MQ=60)
TTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATA > SRR4302536.5355633/1‑94 (MQ=60)
TTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATA < SRR4302536.437461/94‑1 (MQ=60)
ACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATC > SRR4302536.1543876/1‑94 (MQ=60)
CTATCTTCTCCAGGCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGAGATGATGATGCCAGAAGCAGCCATGGGTAAATATCAC > SRR4302536.3792448/1‑94 (MQ=60)
CTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTCATGATGATGCCAGCAGCAGCCATGGGTAAATATCAC > SRR4302536.566016/1‑94 (MQ=60)
TATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACG > SRR4302536.4576799/1‑94 (MQ=60)
TATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACG > SRR4302536.4954051/1‑94 (MQ=60)
ATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGC < SRR4302536.4782163/94‑1 (MQ=60)
ATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGC > SRR4302536.2316585/1‑94 (MQ=60)
ATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGC < SRR4302536.5019165/94‑1 (MQ=60)
TCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCA < SRR4302536.2620067/94‑1 (MQ=60)
TCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCA < SRR4302536.2010974/94‑1 (MQ=60)
CTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAG > SRR4302536.3581513/1‑94 (MQ=60)
CTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAG > SRR4302536.1863294/1‑94 (MQ=60)
CTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAG > SRR4302536.3467817/1‑94 (MQ=60)
TTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGC > SRR4302536.714269/1‑94 (MQ=60)
TTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGC < SRR4302536.6779199/94‑1 (MQ=60)
TTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGC > SRR4302536.5159657/1‑94 (MQ=60)
TCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCG < SRR4302536.4721507/94‑1 (MQ=60)
CTCCAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGA > SRR4302536.5883238/1‑94 (MQ=60)
CAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATAT > SRR4302536.3149689/1‑94 (MQ=60)
CAGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATAT > SRR4302536.4547256/1‑94 (MQ=60)
CAGCCAGAACTCGGTCCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATCCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATAT < SRR4302536.6554437/94‑1 (MQ=60)
AGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATT > SRR4302536.1307115/1‑94 (MQ=60)
AGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATT > SRR4302536.2425247/1‑94 (MQ=60)
AGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATT > SRR4302536.6407924/1‑94 (MQ=60)
AGCCAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATT > SRR4302536.3006301/1‑94 (MQ=60)
AGACAGAACTCGGTTCGAGTCGCAGGCGT‑TTTAAACAGGCAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGGTATT > SRR4302536.62855/1‑94 (MQ=60)
CAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCAT < SRR4302536.5553731/94‑1 (MQ=60)
CAGAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCAT > SRR4302536.5444830/1‑94 (MQ=60)
GAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCA > SRR4302536.2095813/1‑94 (MQ=60)
GAACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCA < SRR4302536.444764/94‑1 (MQ=60)
ACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAAC > SRR4302536.6201239/1‑94 (MQ=60)
ACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAAC < SRR4302536.4290301/94‑1 (MQ=60)
ACTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAAC < SRR4302536.6451833/94‑1 (MQ=60)
CTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAGGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACG < SRR4302536.3437427/94‑1 (MQ=60)
CTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACG < SRR4302536.1382148/94‑1 (MQ=60)
CTCGGTTCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACG < SRR4302536.6600207/94‑1 (MQ=60)
TCGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCAATATTCATCAACGACAAAA < SRR4302536.4522179/94‑1 (MQ=60)
CGAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAAT > SRR4302536.3255103/1‑94 (MQ=60)
ggggCGCAGGCGC‑TTTAATCAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGAAGTGATATTCAGCAACGACAAAATC < SRR4302536.389736/90‑1 (MQ=60)
GAGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATC > SRR4302536.5021123/1‑94 (MQ=60)
AGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCC > SRR4302536.4906512/1‑94 (MQ=60)
AGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCC > SRR4302536.6347992/1‑94 (MQ=60)
AGTCGCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCC > SRR4302536.799827/1‑94 (MQ=60)
GCAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGAC < SRR4302536.4981199/94‑1 (MQ=60)
GCAGACGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGAC < SRR4302536.4150050/94‑1 (MQ=60)
CAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACG > SRR4302536.4841757/1‑94 (MQ=60)
CAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACG < SRR4302536.5788543/94‑1 (MQ=60)
CAGGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACG > SRR4302536.3047636/1‑94 (MQ=60)
GGCGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTC < SRR4302536.3515093/94‑1 (MQ=60)
CGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCG < SRR4302536.4219853/94‑1 (MQ=60)
CGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCG < SRR4302536.1482850/94‑1 (MQ=60)
CGC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGGAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCG > SRR4302536.6738541/1‑94 (MQ=60)
GC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGG > SRR4302536.3796990/1‑94 (MQ=60)
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CAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCAC‑TTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGG > NC_000913/2028615‑2028801
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
