Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,044,033 |
(C)5→6 |
coding (1149/7152 nt) |
b1978 → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,044,028 | 1 | . | C | 96.7%
| 683.7
/ 13.6
| 215 | coding (1144/7152 nt) | b1978 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (2/5); new base C (118/90); total (120/95) |
| Fisher's exact test for biased strand distribution p-value = 2.45e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.48e-01 |
Only 100 of 236 total aligned reads displayed.
CTATGAACAGTATTATGGCGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑A‑CCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTACCT > NC_000913/2043937‑2044115
|
cTATGAACACTATTATGGCGATAAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAACCCTCATGCCATAACCGCTGGACTTAACTAT‑A‑c < 2:860182/93‑1 (MQ=255)
tATGAACAGTATTATGGCGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑A‑cc > 1:2362517/1‑93 (MQ=255)
tATGAACAGTATTATGGCGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑A‑cc < 2:2398807/93‑1 (MQ=255)
aCAGTATTATGGCGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATGCTCATGCCATAACCGCTGGACTTAACTAT‑A‑cccccct > 2:4490746/1‑91 (MQ=255)
aCAGTATTATGGCGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑A‑cccccct < 1:5082458/93‑3 (MQ=255)
cAGTATTATGGCGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑A‑cccccctt > 1:2733654/1‑90 (MQ=255)
cAGTATTATGGCGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑A‑cccccctt > 2:1870533/1‑90 (MQ=255)
tattatGGCGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTccc < 2:665310/93‑1 (MQ=255)
tattatGGCGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTccc > 1:3754416/1‑93 (MQ=255)
tattatGGCGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTccc < 1:1718632/93‑1 (MQ=255)
ttatGGCGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑Gc > 1:1200112/1‑93 (MQ=255)
tatGGCGATGAAGTGCCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCt < 1:1340796/93‑1 (MQ=255)
atGGCGATGAAGTGGCCTTGTTCTATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCtg < 2:3974108/93‑1 (MQ=255)
gATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGAc > 1:2080751/1‑93 (MQ=255)
tGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCt < 1:2448577/93‑1 (MQ=255)
tGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCt < 1:5325191/93‑1 (MQ=255)
aaGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTc < 1:2203952/93‑1 (MQ=255)
aGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCa < 1:6417425/93‑1 (MQ=255)
gTGGCCCTGTTCGATAAAGACGATCGGCAAATTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAg > 2:4825645/1‑93 (MQ=255)
ggCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAgcg > 1:6616878/1‑93 (MQ=255)
ccTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCgg > 1:2489258/1‑93 (MQ=255)
cTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGa > 1:826668/1‑93 (MQ=255)
gTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGc < 2:167949/93‑1 (MQ=255)
tCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCaa > 1:3403948/1‑93 (MQ=255)
tCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCaa < 1:1093265/93‑1 (MQ=255)
gATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACg > 2:3016347/1‑93 (MQ=255)
aTAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGc < 1:4001711/93‑1 (MQ=255)
tAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGcc > 1:3900921/1‑93 (MQ=255)
tAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGcc > 1:88381/1‑93 (MQ=255)
tAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGcc < 1:5548638/93‑1 (MQ=255)
aaGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAg < 1:684133/93‑1 (MQ=255)
aaGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAg < 1:6052850/93‑1 (MQ=255)
aaGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAg > 2:5152958/1‑93 (MQ=255)
aaGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAg > 2:6151859/1‑93 (MQ=255)
aaGACGATCGGCAAAGTAACCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAg < 2:3854702/93‑1 (MQ=255)
aGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAgg < 1:3344546/93‑1 (MQ=255)
aGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACATAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAgg > 2:4016452/1‑93 (MQ=255)
gACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAggg > 1:2601830/1‑93 (MQ=255)
cGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTa > 1:2894685/1‑93 (MQ=255)
aTCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTaaa < 2:3187691/93‑1 (MQ=255)
tCGGCAAAGTACTCCTCATGCCATAACCGCTGGCCTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAAc < 2:251896/93‑1 (MQ=255)
tCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAAc < 2:5982987/93‑1 (MQ=255)
cGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACa < 2:6408269/93‑1 (MQ=255)
cGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACa < 1:3556661/93‑1 (MQ=255)
ggCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAg > 1:5383102/1‑93 (MQ=255)
gCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAgg < 1:6496072/93‑1 (MQ=255)
gCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAgg > 2:6049983/1‑93 (MQ=255)
gCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAgg < 2:4239702/93‑1 (MQ=255)
gCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAACGCGGAGCAACGCCAGGGTAAACAgg < 1:474307/93‑1 (MQ=255)
aaaGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGc > 2:5177943/1‑93 (MQ=255)
aaaGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGc > 2:6213927/1‑93 (MQ=255)
aaGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCg > 2:1896371/1‑93 (MQ=255)
aaGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCg < 1:3599190/93‑1 (MQ=255)
aaGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCg > 1:5226415/1‑93 (MQ=255)
aGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGa > 2:1532310/1‑93 (MQ=255)
gTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGaa > 1:4580589/1‑93 (MQ=255)
aaTCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGaaaa < 2:3918794/93‑1 (MQ=255)
aaTCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGaaaa > 1:2527818/1‑93 (MQ=255)
aaTCCTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGaaaa < 2:382788/93‑1 (MQ=255)
ccTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGa < 2:4738102/93‑1 (MQ=255)
cTCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGac > 1:5652725/1‑93 (MQ=255)
tCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGaca > 2:4530475/1‑93 (MQ=255)
tCATGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGaca > 2:5853721/1‑93 (MQ=255)
cATGCCATAACCGCTGGACTTAACTATCC‑CCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGacac < 1:1897894/93‑1 (MQ=255)
aTGCCATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACAcc < 2:2075656/93‑1 (MQ=255)
ccATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGCAAATGACACCCGt > 1:581110/1‑93 (MQ=255)
cATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGtt > 1:119072/1‑93 (MQ=255)
cATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGtt > 2:3500248/1‑93 (MQ=255)
cATAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGtt > 2:101744/1‑93 (MQ=255)
aTAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGttt < 1:4625284/93‑1 (MQ=255)
aTAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGttt > 2:4160044/1‑93 (MQ=255)
aTAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGttt > 1:4793379/1‑93 (MQ=255)
tAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGtttt > 2:6475474/1‑93 (MQ=255)
tAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGtttt > 1:2243618/1‑93 (MQ=255)
tAACCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGtttt < 1:5714672/93‑1 (MQ=255)
aaCCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTg > 1:1319278/1‑93 (MQ=255)
aaCCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTg > 1:5410590/1‑93 (MQ=255)
aCCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGc > 1:5924112/1‑93 (MQ=255)
aCCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGc > 1:2836164/1‑93 (MQ=255)
aCCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGc < 2:4944853/93‑1 (MQ=255)
aCCGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGc > 2:4763374/1‑93 (MQ=255)
ccGCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGcc > 2:656619/1‑93 (MQ=255)
gCTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGt < 2:3267333/93‑1 (MQ=255)
cTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTc > 2:5629421/1‑93 (MQ=255)
cTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTc < 1:667435/93‑1 (MQ=255)
cTGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTc > 1:1515840/1‑93 (MQ=255)
tGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCg < 1:4058657/93‑1 (MQ=255)
tGGACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCg > 2:164348/1‑93 (MQ=255)
ggACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGa > 2:2263036/1‑93 (MQ=255)
gACTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGAt > 2:6268916/1‑93 (MQ=255)
gACTTAACTAT‑A‑CCCCCCTCCCGGCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGAt < 1:4891658/93‑1 (MQ=255)
aCTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGAtt > 2:370843/1‑93 (MQ=255)
cTTAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGAttt > 1:4357523/1‑93 (MQ=255)
ttAACTATGC‑CCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGAtttt < 2:2343087/93‑1 (MQ=255)
ttAACTATCC‑CCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGAtttt < 2:3056429/93‑1 (MQ=255)
ttAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGAtttt < 2:1343205/93‑1 (MQ=255)
tAACTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTa < 2:5569432/93‑1 (MQ=255)
aaCTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTac > 2:4345126/1‑93 (MQ=255)
aCTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTacc > 1:2658838/1‑93 (MQ=255)
cTAT‑ACCCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTacct < 2:4586434/93‑1 (MQ=255)
|
CTATGAACAGTATTATGGCGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑A‑CCCCCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTACCT > NC_000913/2043937‑2044115
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGAACAGTATTATGGCGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑A‑C‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTACCTGGCAACCTGGC > NC_000913/2043940‑2044126
|
TGAACAGTATTATGGCGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑A‑C‑CC‑CC < SRR4302536.2337193/94‑1 (MQ=60)
GAACAGTGTTATGTAGAGGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑A‑C‑CC‑CCC < SRR4302536.1555195/94‑1 (MQ=60)
ACAGTATTATGGCGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑A‑C‑CC‑CCctt < SRR4302536.5234544/94‑4 (MQ=60)
ACAGTATTATGGCGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑A‑C‑CC‑CCctt > SRR4302536.2815121/1‑91 (MQ=60)
AGTATTATGGCGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCC > SRR4302536.4199140/1‑94 (MQ=60)
AGTATTATGGCGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCC > SRR4302536.4591127/1‑94 (MQ=60)
GTATTATGGCGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC > SRR4302536.3866580/1‑94 (MQ=60)
GTATTATGGCGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑A‑C‑CC‑CCcttcct < SRR4302536.6909025/94‑7 (MQ=60)
TATTATGGCGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑G < SRR4302536.2876885/94‑1 (MQ=60)
TATTATGGCGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑G < SRR4302536.1768309/94‑1 (MQ=60)
ATTATGGCGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GC > SRR4302536.1236181/1‑94 (MQ=60)
TATGGCGATGAAGTGCCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTG < SRR4302536.1380782/94‑1 (MQ=60)
ATGGCGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGA > SRR4302536.2444071/1‑94 (MQ=60)
TGGCGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGAT > SRR4302536.3606723/1‑94 (MQ=60)
GGCGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATG > SRR4302536.5832831/1‑94 (MQ=60)
GGCGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATG > SRR4302536.2277147/1‑94 (MQ=60)
CGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGAC > SRR4302536.4063070/1‑94 (MQ=60)
CGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGAC > SRR4302536.2143395/1‑94 (MQ=60)
ATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCT < SRR4302536.153828/94‑1 (MQ=60)
ATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCT > SRR4302536.5528777/1‑94 (MQ=60)
ATCAAGTGGCCCTGTTCGATAAGGCCGATCGGCAAAGTAATCCTCATGCCATCACCGCTGGACTTAACTAT‑C‑C‑CCGCCTTCCC‑GCTGATGACCT < SRR4302536.5661164/94‑1 (MQ=60)
TGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTT < SRR4302536.2522550/94‑1 (MQ=60)
TGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTT > SRR4302536.2708438/1‑94 (MQ=60)
TGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTT < SRR4302536.5484293/94‑1 (MQ=60)
GAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTC < SRR4302536.6803080/94‑1 (MQ=60)
AAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCA < SRR4302536.2270490/94‑1 (MQ=60)
AGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAG > SRR4302536.4913642/1‑94 (MQ=60)
AGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAG < SRR4302536.6609196/94‑1 (MQ=60)
GTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGC > SRR4302536.552901/1‑94 (MQ=60)
TGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCG > SRR4302536.6813603/1‑94 (MQ=60)
TGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑A‑CTCC‑CCTTCCC‑GCTGATGACCTTCAGCG > SRR4302536.1359612/1‑94 (MQ=60)
GGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGC > SRR4302536.6823946/1‑94 (MQ=60)
CCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGG > SRR4302536.2564357/1‑94 (MQ=60)
CCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGA > SRR4302536.851008/1‑94 (MQ=60)
CTGTTCGATCAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAG > SRR4302536.6723065/1‑94 (MQ=60)
TGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGC > SRR4302536.444261/1‑94 (MQ=60)
TTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAA > SRR4302536.3505192/1‑94 (MQ=60)
TCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAAC < SRR4302536.1126071/94‑1 (MQ=60)
CGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACG < SRR4302536.115309/94‑1 (MQ=60)
CGATAAAGACGAGCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACG < SRR4302536.3934518/94‑1 (MQ=60)
GATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGC > SRR4302536.3717185/1‑94 (MQ=60)
GATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGC > SRR4302536.4721229/1‑94 (MQ=60)
ATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCC > SRR4302536.4016889/1‑94 (MQ=60)
ATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCC < SRR4302536.4120451/94‑1 (MQ=60)
ATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCC > SRR4302536.90745/1‑94 (MQ=60)
TAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCA < SRR4302536.856067/94‑1 (MQ=60)
TAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCA < SRR4302536.5713945/94‑1 (MQ=60)
AAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAG > SRR4302536.2572235/1‑94 (MQ=60)
AAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAG < SRR4302536.3283384/94‑1 (MQ=60)
AAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAG < SRR4302536.6577265/94‑1 (MQ=60)
AAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGG < SRR4302536.4125904/94‑1 (MQ=60)
AAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGG < SRR4302536.704172/94‑1 (MQ=60)
AAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGG < SRR4302536.3704438/94‑1 (MQ=60)
AAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGG < SRR4302536.6233412/94‑1 (MQ=60)
AGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGG > SRR4302536.2679939/1‑94 (MQ=60)
AGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGG < SRR4302536.3443649/94‑1 (MQ=60)
AGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGG > SRR4302536.6262165/1‑94 (MQ=60)
AGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGG < SRR4302536.6862634/94‑1 (MQ=60)
AGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGG > SRR4302536.707467/1‑94 (MQ=60)
ACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTA < SRR4302536.1918878/94‑1 (MQ=60)
ACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTA > SRR4302536.2980047/1‑94 (MQ=60)
CGATCGGCAAAGTAATCCTCATGCCCTAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGccgccacgcgcggggaa > SRR4302536.2426568/1‑77 (MQ=60)
CGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAA > SRR4302536.5524197/1‑94 (MQ=60)
CGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAA > SRR4302536.5215541/1‑94 (MQ=60)
GATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAA > SRR4302536.278786/1‑94 (MQ=60)
GATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAA > SRR4302536.1959689/1‑94 (MQ=60)
GATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAA > SRR4302536.4330981/1‑94 (MQ=60)
ATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAAC > SRR4302536.2971927/1‑94 (MQ=60)
TCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTCT‑ACC‑CC‑CCTTACC‑GCTGATCACCTTCAGCGCCGAGCAACCCCCGGGTAAACG > SRR4302536.5970037/1‑94 (MQ=60)
TCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACA < SRR4302536.123241/94‑1 (MQ=60)
TCGCCAAAGTACTCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACA < SRR4302536.1710465/94‑1 (MQ=60)
CGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAG < SRR4302536.3663011/94‑1 (MQ=60)
CGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAG > SRR4302536.5543763/1‑94 (MQ=60)
GCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGG > SRR4302536.332123/1‑94 (MQ=60)
GCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGG < SRR4302536.6689743/94‑1 (MQ=60)
GCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAACGCGGAGCAACGCCAGGGTAAACAGGG < SRR4302536.486657/94‑1 (MQ=60)
CAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGC > SRR4302536.5614199/1‑94 (MQ=60)
AAAGTAATCCTCATGCCATAAGCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAAAAGGGCG > SRR4302536.5172927/1‑94 (MQ=60)
AAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCG > SRR4302536.5382148/1‑94 (MQ=60)
AAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGA < SRR4302536.3706814/94‑1 (MQ=60)
AGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAA > SRR4302536.4718082/1‑94 (MQ=60)
AGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAA > SRR4302536.849330/1‑94 (MQ=60)
AGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAA > SRR4302536.6650768/1‑94 (MQ=60)
TTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAA < SRR4302536.4970881/94‑1 (MQ=60)
TAATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAA > SRR4302536.2604017/1‑94 (MQ=60)
AATCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAAT > SRR4302536.5577950/1‑94 (MQ=60)
TCCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGA > SRR4302536.6146880/1‑94 (MQ=60)
CCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGAC > SRR4302536.5820710/1‑94 (MQ=60)
CCTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGAC > SRR4302536.4841969/1‑94 (MQ=60)
CTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACA < SRR4302536.3668585/94‑1 (MQ=60)
CTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACA < SRR4302536.2258817/94‑1 (MQ=60)
CTCATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACA > SRR4302536.5790910/1‑94 (MQ=60)
CATGCCATAACCGCTGGACTTAACTATCC‑C‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACC < SRR4302536.1955050/94‑1 (MQ=60)
CATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACC > SRR4302536.2774663/1‑94 (MQ=60)
CATGCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACC > SRR4302536.2533807/1‑94 (MQ=60)
GCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGCAAATGACACCCGT > SRR4302536.595865/1‑94 (MQ=60)
GCCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGT < SRR4302536.5478108/94‑1 (MQ=60)
CCATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTT > SRR4302536.122213/1‑94 (MQ=60)
CATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTT > SRR4302536.4937662/1‑94 (MQ=60)
ATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTT > SRR4302536.2311517/1‑94 (MQ=60)
ATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTT > SRR4302536.6909517/1‑94 (MQ=60)
ATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTT < SRR4302536.2569672/94‑1 (MQ=60)
ATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTT < SRR4302536.2207081/94‑1 (MQ=60)
ATAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTT < SRR4302536.4764267/94‑1 (MQ=60)
TAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTG > SRR4302536.1352401/1‑94 (MQ=60)
TAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTG > SRR4302536.1358660/1‑94 (MQ=60)
TAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTG < SRR4302536.5884618/94‑1 (MQ=60)
TAACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTG > SRR4302536.5572265/1‑94 (MQ=60)
AACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGC > SRR4302536.6100588/1‑94 (MQ=60)
AACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGC > SRR4302536.2920101/1‑94 (MQ=60)
ACCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCC > SRR4302536.4683879/1‑94 (MQ=60)
CCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCG < SRR4302536.248583/94‑1 (MQ=60)
CCGCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCG > SRR4302536.386022/1‑94 (MQ=60)
GCTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTC > SRR4302536.1560467/1‑94 (MQ=60)
CTGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCG < SRR4302536.687012/94‑1 (MQ=60)
TGGACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGA < SRR4302536.4178971/94‑1 (MQ=60)
GACTTAACTAT‑A‑C‑CC‑CCCTCCCGGCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATT < SRR4302536.5038798/94‑1 (MQ=60)
ACTTAACTATCC‑C‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTT < SRR4302536.4877823/94‑1 (MQ=60)
ACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTT < SRR4302536.5940934/94‑1 (MQ=60)
ACTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTT > SRR4302536.4487827/1‑94 (MQ=60)
CTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTT > SRR4302536.2606671/1‑94 (MQ=60)
CTTAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTT < SRR4302536.533241/94‑1 (MQ=60)
TAACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTAC < SRR4302536.3461337/94‑1 (MQ=60)
AACTAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTACC > SRR4302536.2738422/1‑94 (MQ=60)
TAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTACCTGG < SRR4302536.514525/94‑1 (MQ=60)
TAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTACCTGG > SRR4302536.5641697/1‑94 (MQ=60)
TAT‑ACC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTACCTGG > SRR4302536.3350416/1‑94 (MQ=60)
tacC‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTACCTGGCA > SRR4302536.2954985/4‑94 (MQ=60)
C‑C‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTACCTGGCAAC < SRR4302536.4088450/94‑1 (MQ=60)
C‑C‑CC‑CCTCCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTACCTGGCAAC < SRR4302536.1788592/94‑1 (MQ=60)
C‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTACCTGGCACCC > SRR4302536.3326938/1‑94 (MQ=60)
C‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGCGCGAAAATGACACCCGTTTTGCCGCCGATTTTACCTGGCAACC < SRR4302536.5477138/94‑1 (MQ=60)
C‑CC‑CCTCCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTACCTGGCAACC < SRR4302536.5914372/94‑1 (MQ=60)
CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCTTCGATTTTACGTGGCAACCT < SRR4302536.6764230/94‑1 (MQ=60)
CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTACCTGGCAACCT > SRR4302536.375584/1‑94 (MQ=60)
CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTACCTGGCAACCT < SRR4302536.6300975/94‑1 (MQ=60)
C‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTACCTGGCAACCTG < SRR4302536.4304400/94‑1 (MQ=60)
C‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTACCTGGCAACCTG > SRR4302536.5225923/1‑94 (MQ=60)
C‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTACCTGGCAACCTG < SRR4302536.2744722/94‑1 (MQ=60)
C‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTACCTGGCAACCTG < SRR4302536.1361233/94‑1 (MQ=60)
C‑CCTTCCC‑GCTGATGACCTTCAGAGCGGAGCAACGCCAGGGGAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTACCTCGCAACCTG > SRR4302536.3660642/1‑94 (MQ=60)
CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTACCTGGCAACCTGG < SRR4302536.5137389/94‑1 (MQ=60)
CTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTACCTGGCAACCTGGC > SRR4302536.4941075/1‑94 (MQ=60)
CTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTACCTGGCAACCTGGC > SRR4302536.3088816/1‑94 (MQ=60)
CTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTACCTGGCAACCTGGC > SRR4302536.306690/1‑94 (MQ=60)
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TGAACAGTATTATGGCGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTAT‑A‑C‑CC‑CCTTCCC‑GCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTACCTGGCAACCTGGC > NC_000913/2043940‑2044126
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
