Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I2 R1 1475 266.7 13469680 98.2% 13227225 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,074,403 T→C V25A (GTG→GCG)  yeeS → putative DNA repair protein, RADC family

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,074,4030TC100.0% 734.2 / NA 226V25A (GTG→GCG) yeeSputative DNA repair protein, RADC family
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (114/112);  total (114/112)

Only 100 of 232 total aligned reads displayed.

GGTAAAGTAGAGGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGTGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGGTGCTGTATCT  >  NC_000913/2074313‑2074490
                                                                                          |                                                                                       
  tAAAGTAGAGGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGcc                                                                                     <  1:3835967/93‑1 (MQ=255)
    aaGTAGAGGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACACGGCGCGGCCtt                                                                                   >  1:1085441/1‑93 (MQ=255)
      gTAGAGGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAATCCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCa                                                                                 <  1:5872498/93‑1 (MQ=255)
      gTAGAGGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCa                                                                                 >  1:2493203/1‑93 (MQ=255)
       tAGAGGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCAc                                                                                <  2:5158510/93‑1 (MQ=255)
       tAGAGGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCAc                                                                                <  1:664716/93‑1 (MQ=255)
        agagGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCAcc                                                                               >  2:366772/1‑93 (MQ=255)
        agagGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCAcc                                                                               >  1:4740499/1‑93 (MQ=255)
         gaggagAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCAccc                                                                              >  2:5721579/1‑92 (MQ=255)
         gaggagAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCt                                                                              <  1:236564/93‑1 (MQ=255)
          aggagAGATGACCCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTc                                                                             <  1:240514/93‑1 (MQ=255)
           ggagAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTcc                                                                            >  1:4306184/1‑93 (MQ=255)
           ggagAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTcc                                                                            >  2:1562312/1‑93 (MQ=255)
              gagaTGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCAcc                                                                         <  1:698545/93‑1 (MQ=255)
               agaTGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCAccc                                                                        <  2:3269585/93‑1 (MQ=255)
                gaTGACGCCCGGCGAGCGCAGCCTCATTCAACGTGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGTCCTTATCCTCCACCCg                                                                       >  1:4544446/1‑93 (MQ=255)
                gaTGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCg                                                                       <  2:6096083/93‑1 (MQ=255)
                  tGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTg                                                                     <  1:1809849/93‑1 (MQ=255)
                   gccGCCCGGCGAGCGCAGCCTCCTTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGACGTCACCGCCACCCGTgc                                                                    >  1:281896/3‑93 (MQ=255)
                   gACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTgc                                                                    >  1:3916509/1‑93 (MQ=255)
                    aCGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTgca                                                                   >  1:5158921/1‑93 (MQ=255)
                    aCGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTgca                                                                   <  1:3514363/93‑1 (MQ=255)
                       cccGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTgcagca                                                                >  1:6610406/1‑93 (MQ=255)
                        ccGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCAc                                                               >  1:2603761/1‑93 (MQ=255)
                         cGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACg                                                              >  1:2464208/1‑93 (MQ=255)
                          ggCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACgg                                                             >  1:3964214/1‑93 (MQ=255)
                            cGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGa                                                           <  1:5665704/93‑1 (MQ=255)
                            cGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGa                                                           >  2:3869608/1‑93 (MQ=255)
                             gAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGaa                                                          >  2:2216806/1‑93 (MQ=255)
                             gAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGaa                                                          <  2:4150866/93‑1 (MQ=255)
                              aGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAAt                                                         <  2:5062297/93‑1 (MQ=255)
                              aGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAAt                                                         <  2:5981790/93‑1 (MQ=255)
                              aGCGCACCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAAt                                                         <  2:2707144/93‑1 (MQ=255)
                                 gcAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGc                                                      >  1:3161513/1‑93 (MQ=255)
                                  cAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCt                                                     <  1:1886669/93‑1 (MQ=255)
                                   aGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTg                                                    >  2:3366737/1‑93 (MQ=255)
                                     ccTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGAt                                                  >  2:4542879/1‑93 (MQ=255)
                                     ccTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGAt                                                  <  1:4242146/93‑1 (MQ=255)
                                      cTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGCtt                                                 >  1:3415035/1‑93 (MQ=255)
                                      cTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGAtt                                                 <  2:5663168/93‑1 (MQ=255)
                                       tCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTc                                                >  2:5515434/1‑93 (MQ=255)
                                        cATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCt                                               <  2:1050827/93‑1 (MQ=255)
                                        cATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCt                                               >  1:5562082/1‑93 (MQ=255)
                                         aTTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTg                                              >  1:5960815/1‑93 (MQ=255)
                                         aTTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTg                                              <  1:4103835/93‑1 (MQ=255)
                                          ttCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGa                                             <  1:2309633/93‑1 (MQ=255)
                                          ttCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGa                                             >  2:4971848/1‑93 (MQ=255)
                                              aCGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCCCCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACAt                                         <  1:479705/93‑1 (MQ=255)
                                              aCGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACAt                                         <  2:3809518/93‑1 (MQ=255)
                                              aCGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACAt                                         >  2:3497611/1‑93 (MQ=255)
                                              aCGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACAt                                         <  2:1771065/93‑1 (MQ=255)
                                              aCGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACAt                                         <  2:1652346/93‑1 (MQ=255)
                                               cGGGCTCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATg                                        <  1:1369014/93‑1 (MQ=255)
                                               cGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTTCAGCACGGGCATGGCTTATTCTGAACATg                                        >  1:6249234/1‑93 (MQ=255)
                                               cGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATg                                        >  2:4490924/1‑93 (MQ=255)
                                               cGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATg                                        <  2:5863324/93‑1 (MQ=255)
                                                 ggCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGc                                      <  2:527362/93‑1 (MQ=255)
                                                 ggCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGc                                      <  1:3000770/93‑1 (MQ=255)
                                                 ggCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGc                                      <  2:212809/93‑1 (MQ=255)
                                                     cTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCgggg                                  >  2:3723441/1‑92 (MQ=255)
                                                     cTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCgggc                                  >  1:2782830/1‑92 (MQ=255)
                                                     cTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGa                                  >  2:4202507/1‑93 (MQ=255)
                                                     cTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGa                                  <  2:3038680/93‑1 (MQ=255)
                                                      tGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGAc                                 >  2:2491542/1‑93 (MQ=255)
                                                       gAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACt                                >  1:679065/1‑93 (MQ=255)
                                                       gAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACt                                <  1:1289972/93‑1 (MQ=255)
                                                        aaaaCCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGGCTg                               >  2:1007347/1‑93 (MQ=255)
                                                         aaaCCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGGTGATTCTGAACATGGCGGGACTgg                              >  1:6191114/1‑93 (MQ=255)
                                                          aaCCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGGCTggg                             >  2:2994726/1‑92 (MQ=255)
                                                           aCCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAg                            <  1:5395511/93‑1 (MQ=255)
                                                            cccTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGc                           <  2:2671734/93‑1 (MQ=255)
                                                            cccTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGc                           >  2:2267618/1‑93 (MQ=255)
                                                              cTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGt                         <  2:30601/93‑1 (MQ=255)
                                                              cTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGt                         >  1:2131085/1‑93 (MQ=255)
                                                              cTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGt                         <  2:6400985/93‑1 (MQ=255)
                                                                ggACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTga                       >  1:6022926/1‑93 (MQ=255)
                                                                 gACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGGCTGGAGCGTgaa                      >  1:3720735/1‑93 (MQ=255)
                                                                 gACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTgaa                      <  1:1454296/93‑1 (MQ=255)
                                                                  aCCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTgaag                     >  2:6602046/1‑93 (MQ=255)
                                                                  aCCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTgaaa                     >  1:3692822/1‑92 (MQ=255)
                                                                   ccGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTgaaga                    <  1:5381055/93‑1 (MQ=255)
                                                                    cGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTgaagaa                   >  2:3309409/1‑93 (MQ=255)
                                                                     gCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAAt                  <  1:2737780/93‑1 (MQ=255)
                                                                     gCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAAt                  >  1:2870099/1‑93 (MQ=255)
                                                                       cATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTc                <  1:123173/93‑1 (MQ=255)
                                                                       cATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTc                >  2:2754914/1‑93 (MQ=255)
                                                                         tCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCg              >  1:3312554/1‑93 (MQ=255)
                                                                           ttCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCggg            >  2:4043487/1‑93 (MQ=255)
                                                                           ttCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCggg            >  2:4326080/1‑93 (MQ=255)
                                                                           ttCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCggg            >  2:2134288/1‑93 (MQ=255)
                                                                              aTGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGGTGc         >  1:1320677/1‑93 (MQ=255)
                                                                              aTGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGGTGc         >  1:4666712/1‑93 (MQ=255)
                                                                               tGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGGTGCt        <  1:1544048/93‑1 (MQ=255)
                                                                               tGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGGTGCt        <  1:5322774/93‑1 (MQ=255)
                                                                               tGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGGTGCt        <  2:1190402/93‑1 (MQ=255)
                                                                               tGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGGTGCt        <  2:3962367/93‑1 (MQ=255)
                                                                               tGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGAGCGCt        >  1:625925/1‑93 (MQ=255)
                                                                                  aCCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGGTGCTGTa     <  1:551951/93‑1 (MQ=255)
                                                                                    ccGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGGTGCTGTATc   >  2:2435130/1‑93 (MQ=255)
                                                                                    ccGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGGTGCTGTATc   <  2:3932398/93‑1 (MQ=255)
                                                                                          |                                                                                       
GGTAAAGTAGAGGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGTGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGGTGCTGTATCT  >  NC_000913/2074313‑2074490

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AAGGTAAAGTAGAGGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGTGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGGTGCTGTATCTGAACAA  >  NC_000913/2074311‑2074496
                                                                                            |                                                                                             
AAGGTAAAGTAGAGGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCG                                                                                              <  SRR4302536.4884755/94‑1 (MQ=60)
AAGGTAAAGTAGAGGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCG                                                                                              >  SRR4302536.6256512/1‑94 (MQ=60)
AAGGTAAAGTAGAGGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCG                                                                                              >  SRR4302536.5809438/1‑94 (MQ=60)
AAGGTAAAGTAGAGGAGAGATGAAGCCCGGCGAGCGCAGCCTCATTCAACGGGCTCTGAAACCCCTGGACCGCCATCTTCATGAACCCGGCGCG                                                                                              <  SRR4302536.5789173/94‑1 (MQ=60)
 AGGTAAAGTAGAGGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGG                                                                                             <  SRR4302536.5705289/94‑1 (MQ=60)
 AGGTAAAGTAGAGGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGG                                                                                             >  SRR4302536.3385469/1‑94 (MQ=60)
    TAAAGTAGAGGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCT                                                                                          <  SRR4302536.3950193/94‑1 (MQ=60)
     AAAGTAGAGGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTT                                                                                         <  SRR4302536.4381772/94‑1 (MQ=60)
     AAAGTAGAGGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACACGGCGCGGCCTT                                                                                         >  SRR4302536.1117966/1‑94 (MQ=60)
       AGTAGAGGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCA                                                                                       >  SRR4302536.2568393/1‑94 (MQ=60)
        GTAGAGGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAATCCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCAC                                                                                      <  SRR4302536.6047464/94‑1 (MQ=60)
        GTAGAGGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCAC                                                                                      >  SRR4302536.5768375/1‑94 (MQ=60)
         TAGAGGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACC                                                                                     <  SRR4302536.6111678/94‑1 (MQ=60)
         TAGAGGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACC                                                                                     <  SRR4302536.684216/94‑1 (MQ=60)
         TAGAGGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACC                                                                                     >  SRR4302536.4883142/1‑94 (MQ=60)
          AGAGGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCT                                                                                    >  SRR4302536.6262950/1‑94 (MQ=60)
           GAGGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTC                                                                                   >  SRR4302536.3101543/1‑94 (MQ=60)
           GAGGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTC                                                                                   <  SRR4302536.242850/94‑1 (MQ=60)
            AGGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGGCTTCACCTCC                                                                                  >  SRR4302536.3762531/1‑94 (MQ=60)
            AGGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCC                                                                                  <  SRR4302536.3007986/94‑1 (MQ=60)
            AGGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCC                                                                                  >  SRR4302536.4434982/1‑94 (MQ=60)
            AGGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCC                                                                                  >  SRR4302536.6436724/1‑94 (MQ=60)
            AGGAGAGATGACCCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCC                                                                                  <  SRR4302536.246915/94‑1 (MQ=60)
             GGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCA                                                                                 <  SRR4302536.282816/94‑1 (MQ=60)
               TGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACC                                                                               >  SRR4302536.448180/1‑94 (MQ=60)
               AGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACC                                                                               >  SRR4302536.4917887/1‑94 (MQ=60)
                GAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCC                                                                              <  SRR4302536.718949/94‑1 (MQ=60)
                 AGATGACGCCCGGCGAGCGCAGCCTCATTCAACGTGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGTCCTTATCCTCCACCCG                                                                             >  SRR4302536.4680734/1‑94 (MQ=60)
                 AGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGTCCTGAAAACCCTTGACCGCCATCTTCATGAACCCGGCGCCGCCTTCACCTCCACCTG                                                                             >  SRR4302536.3169147/1‑94 (MQ=60)
                 AGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCG                                                                             >  SRR4302536.3922702/1‑94 (MQ=60)
                   ATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTG                                                                           >  SRR4302536.535097/1‑94 (MQ=60)
                    TGCCGCCCGGCGAGCGCAGCCTCCTTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGACGTCACCGCCACCCGTGC                                                                          >  SRR4302536.289391/1‑94 (MQ=60)
                    TGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGC                                                                          <  SRR4302536.1864458/94‑1 (MQ=60)
                    TGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGC                                                                          >  SRR4302536.4032939/1‑94 (MQ=60)
                    TGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGC                                                                          >  SRR4302536.5491827/1‑94 (MQ=60)
                     GACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCA                                                                         >  SRR4302536.5312852/1‑94 (MQ=60)
                      ACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAG                                                                        <  SRR4302536.3619308/94‑1 (MQ=60)
                        GCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCA                                                                      >  SRR4302536.6806965/1‑94 (MQ=60)
                         CCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCAC                                                                     >  SRR4302536.2681926/1‑94 (MQ=60)
                          CCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACG                                                                    >  SRR4302536.2538620/1‑94 (MQ=60)
                           CGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGG                                                                   >  SRR4302536.4081899/1‑94 (MQ=60)
                             GCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGA                                                                 <  SRR4302536.2891499/94‑1 (MQ=60)
                             GCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGA                                                                 <  SRR4302536.4310946/94‑1 (MQ=60)
                              CGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAA                                                                <  SRR4302536.5834103/94‑1 (MQ=60)
                               GAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAAT                                                               <  SRR4302536.2581572/94‑1 (MQ=60)
                                AGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATG                                                              <  SRR4302536.2926987/94‑1 (MQ=60)
                                  CGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGC                                                            >  SRR4302536.3254118/1‑94 (MQ=60)
                                   GCAGCCTCATTCAACGGGCCCTGAAAACCCTGGAACGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCT                                                           >  SRR4302536.4738326/1‑94 (MQ=60)
                                   GCAGCCTCATGCAACGGTCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCT                                                           <  SRR4302536.1344006/94‑1 (MQ=60)
                                    CAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTG                                                          <  SRR4302536.1943408/94‑1 (MQ=60)
                                      GCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGAT                                                        <  SRR4302536.1648613/94‑1 (MQ=60)
                                       CCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGCTT                                                       >  SRR4302536.3516661/1‑94 (MQ=60)
                                       CCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATT                                                       <  SRR4302536.4368462/94‑1 (MQ=60)
                                        CTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCANCCGTGCAGCACGGGAATNGCTGATTC                                                      >  SRR4302536.6844143/1‑94 (MQ=60)
                                         TCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCT                                                     <  SRR4302536.4847859/94‑1 (MQ=60)
                                         TCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCT                                                     >  SRR4302536.5727718/1‑94 (MQ=60)
                                          CATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTG                                                    >  SRR4302536.6138470/1‑94 (MQ=60)
                                           ATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGA                                                   >  SRR4302536.1476431/1‑94 (MQ=60)
                                           ATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGA                                                   <  SRR4302536.4225581/94‑1 (MQ=60)
                                            TTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAA                                                  <  SRR4302536.2379734/94‑1 (MQ=60)
                                             TCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAAC                                                 <  SRR4302536.4833749/94‑1 (MQ=60)
                                             TCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAAC                                                 >  SRR4302536.6650012/1‑94 (MQ=60)
                                              CAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACA                                                >  SRR4302536.289902/1‑94 (MQ=60)
                                              CAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACA                                                >  SRR4302536.1286368/1‑94 (MQ=60)
                                              CAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACA                                                <  SRR4302536.2155212/94‑1 (MQ=60)
                                              CAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACA                                                >  SRR4302536.1406227/1‑94 (MQ=60)
                                                ACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCCCCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATG                                              <  SRR4302536.492187/94‑1 (MQ=60)
                                                ACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTTCAGCACGGGCATGGCTTATTCTGAACATG                                              >  SRR4302536.6435407/1‑94 (MQ=60)
                                                 CGGGCTCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGG                                             <  SRR4302536.1409813/94‑1 (MQ=60)
                                                 CGGGCCCTGAAACCCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGG                                             <  SRR4302536.7041/94‑1 (MQ=60)
                                                   GGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCG                                           <  SRR4302536.4223619/94‑1 (MQ=60)
                                                   GGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCG                                           <  SRR4302536.779991/94‑1 (MQ=60)
                                                   GGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCG                                           <  SRR4302536.3088988/94‑1 (MQ=60)
                                                    GCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGTCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTTAACATGTCGG                                          >  SRR4302536.1406199/1‑94 (MQ=60)
                                                     CCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGG                                         <  SRR4302536.3648384/94‑1 (MQ=60)
                                                     CCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGG                                         <  SRR4302536.2455493/94‑1 (MQ=60)
                                                      CCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGC                                        >  SRR4302536.2865494/1‑94 (MQ=60)
                                                      CCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGA                                        <  SRR4302536.2481814/94‑1 (MQ=60)
                                                       CTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGAC                                       >  SRR4302536.5548206/1‑94 (MQ=60)
                                                       CTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGAC                                       >  SRR4302536.6166392/1‑94 (MQ=60)
                                                        TGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACT                                      >  SRR4302536.698961/1‑94 (MQ=60)
                                                         GAAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTG                                     <  SRR4302536.1328557/94‑1 (MQ=60)
                                                          AAAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGGTGATTCTGAACATGGCGGGACTGG                                    >  SRR4302536.6375533/1‑94 (MQ=60)
                                                           AAACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGA                                   >  SRR4302536.6914128/1‑94 (MQ=60)
                                                            AACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAG                                  <  SRR4302536.3607481/94‑1 (MQ=60)
                                                            AACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAG                                  <  SRR4302536.22998/94‑1 (MQ=60)
                                                             ACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGC                                 <  SRR4302536.397638/94‑1 (MQ=60)
                                                             ACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGC                                 <  SRR4302536.5664454/94‑1 (MQ=60)
                                                             ACCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGC                                 <  SRR4302536.5556617/94‑1 (MQ=60)
                                                              CCCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCG                                <  SRR4302536.2199624/94‑1 (MQ=60)
                                                               CCTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGT                               >  SRR4302536.2195062/1‑94 (MQ=60)
                                                                CTGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTG                              <  SRR4302536.5214327/94‑1 (MQ=60)
                                                                 TGGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGA                             >  SRR4302536.6202500/1‑94 (MQ=60)
                                                                  GGACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGGCTGGAGCGTGAA                            >  SRR4302536.3831960/1‑94 (MQ=60)
                                                                   GACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGGCTGGAGCGTGAAG                           >  SRR4302536.2482266/1‑94 (MQ=60)
                                                                   GACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAG                           <  SRR4302536.2730258/94‑1 (MQ=60)
                                                                   GACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAG                           <  SRR4302536.1497360/94‑1 (MQ=60)
                                                                   GACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAA                           >  SRR4302536.3803262/1‑94 (MQ=60)
                                                                    ACCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGA                          >  SRR4302536.6594048/1‑94 (MQ=60)
                                                                     CCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGGCTGGAGCGTGAAGAA                         >  SRR4302536.2403481/1‑94 (MQ=60)
                                                                     CCGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAA                         <  SRR4302536.5541637/94‑1 (MQ=60)
                                                                      CGCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAAT                        >  SRR4302536.2954851/1‑94 (MQ=60)
                                                                       GCCATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATT                       <  SRR4302536.2819358/94‑1 (MQ=60)
                                                                         CATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCC                     <  SRR4302536.126424/94‑1 (MQ=60)
                                                                         CATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTATGAACATGGCCGGACTGGACCGTGAAGAAATCC                     >  SRR4302536.5903343/1‑94 (MQ=60)
                                                                          ATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCG                    >  SRR4302536.3460768/1‑94 (MQ=60)
                                                                          ATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCG                    <  SRR4302536.886132/94‑1 (MQ=60)
                                                                          ATCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCG                    >  SRR4302536.3410434/1‑94 (MQ=60)
                                                                          ATCTTCAGGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCG                    >  SRR4302536.5721576/1‑94 (MQ=60)
                                                                           TCTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGGAGAATTCCGG                   >  SRR4302536.3361595/1‑94 (MQ=60)
                                                                            CTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGG                  >  SRR4302536.1858325/1‑94 (MQ=60)
                                                                            CTTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGG                  >  SRR4302536.3817881/1‑94 (MQ=60)
                                                                             TTCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGGT                 <  SRR4302536.1539272/94‑1 (MQ=60)
                                                                             TTCATGAACCCGGCGCGCCCTTCGCGTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGGT                 <  SRR4302536.4063904/94‑1 (MQ=60)
                                                                              TCATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGGTG                <  SRR4302536.4075874/94‑1 (MQ=60)
                                                                               CATGACCCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGGTGC               <  SRR4302536.5323098/94‑1 (MQ=60)
                                                                               CATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGGTGC               >  SRR4302536.1360096/1‑94 (MQ=60)
                                                                               CATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGGTGC               >  SRR4302536.4807030/1‑94 (MQ=60)
                                                                               CATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGGTGC               >  SRR4302536.2810932/1‑94 (MQ=60)
                                                                                ATGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGAGCGCT              >  SRR4302536.644488/1‑94 (MQ=60)
                                                                                 TGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGGTGCTG             <  SRR4302536.5481777/94‑1 (MQ=60)
                                                                                 TGAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGGTGCTG             <  SRR4302536.1589423/94‑1 (MQ=60)
                                                                                 AGAACCCGGCGCGGCCTTCGCCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGGTGCTG             <  SRR4302536.191241/94‑1 (MQ=60)
                                                                                  GATCCCGGCGCGGCCTTCACCTCCGCCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGGTGTTGT            <  SRR4302536.5563336/94‑1 (MQ=60)
                                                                                  GAACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGGGAAGAATTCCGGGGGCTGT            >  SRR4302536.5987924/1‑94 (MQ=60)
                                                                                   AACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGGTGCTGTA           >  SRR4302536.6392319/1‑94 (MQ=60)
                                                                                    ACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGGTGCTGTAT          <  SRR4302536.566020/94‑1 (MQ=60)
                                                                                    ACCCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGGTGCTGTAT          <  SRR4302536.6272777/94‑1 (MQ=60)
                                                                                      CCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGTGTGAAGAATTCCGCGGGCTGTATCT        >  SRR4302536.4424087/1‑94 (MQ=60)
                                                                                      CCGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGGTGCTGTATCT        <  SRR4302536.254854/94‑1 (MQ=60)
                                                                                       CGGCGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGGTGCTGTATCTG       <  SRR4302536.1259478/94‑1 (MQ=60)
                                                                                          CGCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGGCTGGAGCGTGAAGAATTCCGGGTGCTGTATCTGAAC    >  SRR4302536.517131/1‑94 (MQ=60)
                                                                                           GCGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGGTGCTGTATCTGAACA   >  SRR4302536.5193076/1‑94 (MQ=60)
                                                                                            CGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATGCTGAACATGGCGGTACTGGAGCGTGAAGAATTCCGGGTGCTGTATCTGAACAA  <  SRR4302536.1811988/94‑1 (MQ=60)
                                                                                            |                                                                                             
AAGGTAAAGTAGAGGAGAGATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGTGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGGTGCTGTATCTGAACAA  >  NC_000913/2074311‑2074496

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑