Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,075,196 |
(G)5→4 |
coding (63/369 nt) |
yeeU → |
putative structural protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,075,192 | 0 | G | . | 100.0%
| 971.0
/ NA
| 211 | coding (59/369 nt) | yeeU | putative structural protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (112/99); total (112/99) |
Only 100 of 235 total aligned reads displayed.
CCATTCTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTGGGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGG > NC_000913/2075100‑2075279
|
ccATTCTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCtggtg > 2:4266641/1‑93 (MQ=255)
cATTCTTAGCCGATTTTCTGTAAGTATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCtggtgg < 2:5739542/93‑1 (MQ=255)
cATTCTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCtggtgg < 2:5345704/93‑1 (MQ=255)
cATTCTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCtggtgg < 2:3323661/93‑1 (MQ=255)
aTTCTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTggg > 2:244400/1‑93 (MQ=255)
aTTCTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTggg > 2:1453872/1‑93 (MQ=255)
ttCTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTgggg > 1:1933635/1‑93 (MQ=255)
ttCTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTgggg > 1:473177/1‑93 (MQ=255)
gCCGGTTTTTTGTAAGGATTTTATCGTGTCAGACACTCTCCCCCGGACAACCCTTCCGGACGACAATCACGACCGCCCCTGGT‑GGGGCTGccc < 2:5147288/93‑1 (MQ=255)
gCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGccc < 1:796320/93‑1 (MQ=255)
gCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGccc > 1:2806950/1‑93 (MQ=255)
ccGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCt < 2:4700183/93‑1 (MQ=255)
cGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTg > 2:5215331/1‑93 (MQ=255)
aTTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCa > 1:5757338/1‑93 (MQ=255)
aTTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCa > 2:4800146/1‑93 (MQ=255)
ttttCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCAc > 1:5453666/1‑93 (MQ=255)
ttCTGTAAGGATTTTATCGTGCCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCg < 1:3438287/93‑1 (MQ=255)
cTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTg > 1:1208524/1‑93 (MQ=255)
cTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTg > 1:382836/1‑93 (MQ=255)
gTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGAc > 1:2989862/1‑93 (MQ=255)
gTAAGGATTTTATCGTGTCAGACACACTCCCAGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGTCCTGCACCGTGag > 2:3054655/1‑92 (MQ=255)
tAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCTCTGCACGCTGACg > 1:1348604/1‑93 (MQ=255)
aaGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATAACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGc > 2:2002326/1‑93 (MQ=255)
ggATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGccc < 2:2047735/93‑1 (MQ=255)
aTTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTg > 2:1557181/1‑93 (MQ=255)
aTTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTg > 2:3748991/1‑93 (MQ=255)
ttttATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGGCCTGt > 1:6077823/1‑93 (MQ=255)
ttttATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGt < 2:1688361/93‑1 (MQ=255)
ttttATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGt > 1:2239495/1‑93 (MQ=255)
tATCGTGTCAGACCCACCCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTc < 2:4533267/93‑1 (MQ=255)
tATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTc > 1:4354975/1‑93 (MQ=255)
tATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGCTTc > 2:3998649/1‑93 (MQ=255)
tATCGTGCCAGACCCACTCCCCGGGACAACCCGTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTc < 2:5663881/93‑1 (MQ=255)
aTCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCACTGTTTCg > 1:1483332/1‑93 (MQ=255)
tCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCgg > 2:3709557/1‑93 (MQ=255)
tCGTGTCAGACACACCCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCgg < 1:4566198/93‑1 (MQ=255)
tCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCAc < 1:1361542/93‑1 (MQ=255)
gtcacacTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTc > 1:903514/3‑93 (MQ=255)
gACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTc > 1:4765319/1‑93 (MQ=255)
gACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTc > 1:2162560/1‑93 (MQ=255)
cacacTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTg > 2:4157588/1‑93 (MQ=255)
cacacTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTg < 2:6399760/93‑1 (MQ=255)
cacacCCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTg < 1:3743492/93‑1 (MQ=255)
acacTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTgg < 2:1139940/93‑1 (MQ=255)
cacTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCCCGTCTGGt > 1:4506857/1‑93 (MQ=255)
cacTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGt < 2:6059932/93‑1 (MQ=255)
cacTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGt < 2:2986452/93‑1 (MQ=255)
cacTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGt < 1:5137674/93‑1 (MQ=255)
acTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTg > 2:4619371/1‑93 (MQ=255)
cTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGc > 2:4457517/1‑93 (MQ=255)
ccccGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCag > 2:5874377/1‑93 (MQ=255)
ccGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCaggg > 2:353150/1‑92 (MQ=255)
ccGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCagga < 2:3226380/93‑1 (MQ=255)
ccGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCagga > 2:6595491/1‑93 (MQ=255)
cGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCaggag < 1:1030312/93‑1 (MQ=255)
gggACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCaggagg > 2:1746103/1‑93 (MQ=255)
gACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAgggg > 1:4622936/1‑92 (MQ=255)
gACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGt < 1:4256450/93‑1 (MQ=255)
acaacaCTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAgggga > 2:384500/1‑91 (MQ=255)
acaacaCTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTa < 2:2229430/93‑1 (MQ=255)
aacaCTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAgggatac > 2:619186/1‑89 (MQ=255)
acacTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAAcc < 2:6067384/93‑1 (MQ=255)
cacTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCg > 1:3338112/1‑93 (MQ=255)
cTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGt < 1:4136630/93‑1 (MQ=255)
cTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGt < 1:5357378/93‑1 (MQ=255)
ttCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGtt < 2:5552234/93‑1 (MQ=255)
ttCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGtt < 1:69116/93‑1 (MQ=255)
tCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTg > 1:4881866/1‑93 (MQ=255)
cccGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGc < 1:1091995/93‑1 (MQ=255)
cccGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGc < 1:5899001/93‑1 (MQ=255)
cccGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGc < 1:5953355/93‑1 (MQ=255)
cccGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGc > 2:3123654/1‑93 (MQ=255)
cccGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAAACGGTTGc > 1:2335023/1‑93 (MQ=255)
cccGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCGGTTGc > 1:2651749/1‑93 (MQ=255)
ccGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCa < 1:3392674/93‑1 (MQ=255)
cgacgaCAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCGGTTGCAt > 1:2912330/1‑93 (MQ=255)
cgacgaCAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCGGGTGCAt > 1:2533818/1‑93 (MQ=255)
acgacAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTa < 1:6104349/93‑1 (MQ=255)
acAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCt > 1:6337468/1‑93 (MQ=255)
acAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCt < 2:589243/93‑1 (MQ=255)
acAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCt < 2:276573/93‑1 (MQ=255)
acAAGCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCt < 1:2479883/93‑1 (MQ=255)
cAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCtt < 2:6368133/93‑1 (MQ=255)
aaaTCACGCCCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCtt < 2:2580203/92‑1 (MQ=255)
aaTCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTg > 1:6168587/1‑93 (MQ=255)
aTCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGc < 2:799092/93‑1 (MQ=255)
aTCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGc > 1:2785099/1‑93 (MQ=255)
aTCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCGGTTGCATTACCTTGc > 1:5574764/1‑93 (MQ=255)
tCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGcc < 2:2273075/93‑1 (MQ=255)
tCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGcc < 2:5921052/93‑1 (MQ=255)
tCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGGGACGCCCTGTTTCGGGGCACGTCTGGGCCAGGAGGGCAACCGGTTGCATTACCTTGcc > 2:1127317/1‑93 (MQ=255)
cACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCg > 1:3564156/1‑93 (MQ=255)
gACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGAcc < 2:1267881/93‑1 (MQ=255)
gACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGAcc > 1:2077425/1‑93 (MQ=255)
gACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGAcc > 1:1323378/1‑93 (MQ=255)
ccGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACcgc > 1:5152936/1‑93 (MQ=255)
ccGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCGGTTGCATTACCTTGCCGACcgc > 2:2628831/1‑93 (MQ=255)
ccTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCgg > 2:1879039/1‑93 (MQ=255)
ccTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCgg < 1:3958478/93‑1 (MQ=255)
ccTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCgg < 2:6372342/93‑1 (MQ=255)
|
CCATTCTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTGGGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGG > NC_000913/2075100‑2075279
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTCTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTGGGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAGAGGC > NC_000913/2075103‑2075289
|
TTCTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTGGGGC > SRR4302536.2815884/1‑94 (MQ=60)
CTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTG > SRR4302536.3614644/1‑94 (MQ=60)
TAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCC > SRR4302536.4153671/1‑94 (MQ=60)
AGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCC > SRR4302536.2890185/1‑94 (MQ=60)
AGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCC > SRR4302536.1267390/1‑94 (MQ=60)
GCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACCCTCCCCGGGACAACACTCCCCGACGACAATCACGCCCGCCCCTGGT‑GGGGCTGCCCT < SRR4302536.5083720/94‑1 (MQ=60)
GCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCT < SRR4302536.819652/94‑1 (MQ=60)
CGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGC > SRR4302536.4737700/1‑94 (MQ=60)
CGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCCGC > SRR4302536.5086084/1‑94 (MQ=60)
GATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCA > SRR4302536.5928614/1‑94 (MQ=60)
ATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCAC < SRR4302536.3437466/94‑1 (MQ=60)
ATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCAC > SRR4302536.2532358/1‑94 (MQ=60)
ATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCAC > SRR4302536.5616771/1‑94 (MQ=60)
TTCTGTAAGGATTTTATCGTGCCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGG < SRR4302536.3540674/94‑1 (MQ=60)
TCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTG > SRR4302536.1244840/1‑94 (MQ=60)
TCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTG > SRR4302536.392927/1‑94 (MQ=60)
TGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGAC > SRR4302536.3077831/1‑94 (MQ=60)
GTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCTCTGCACGCTGACG > SRR4302536.1388827/1‑94 (MQ=60)
GATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTG < SRR4302536.5297567/94‑1 (MQ=60)
ATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGGCCTGT > SRR4302536.6259121/1‑94 (MQ=60)
ATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGT > SRR4302536.2307253/1‑94 (MQ=60)
TTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTT > SRR4302536.1397419/1‑94 (MQ=60)
TTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTT < SRR4302536.3911044/94‑1 (MQ=60)
TTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCCCCGTGACGCCCTGTTT > SRR4302536.621792/1‑94 (MQ=60)
TTTAGCGTGTCAGACACACTCCCCGGTACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTT < SRR4302536.479587/94‑1 (MQ=60)
TTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTC > SRR4302536.4485240/1‑94 (MQ=60)
TATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTCTTTCG > SRR4302536.4673813/1‑94 (MQ=60)
TATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCACTGTTTCG > SRR4302536.1527153/1‑94 (MQ=60)
ATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTTGG > SRR4302536.43130/1‑94 (MQ=60)
ATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGG > SRR4302536.6356008/1‑94 (MQ=60)
ATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGG > SRR4302536.5330871/1‑94 (MQ=60)
TCGTGTCAGACACACCCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGG < SRR4302536.4703207/94‑1 (MQ=60)
CGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGG > SRR4302536.5659930/1‑94 (MQ=60)
GTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGACCCTGGT‑GGGGCTGGCCTGCACCGAGACGCCCTGTTTCGTGGC > SRR4302536.6331642/1‑94 (MQ=60)
TGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCA > SRR4302536.257702/1‑94 (MQ=60)
TCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACG < SRR4302536.1402132/94‑1 (MQ=60)
CAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGAGGCCCCGTTTCGGGGCACGC > SRR4302536.268541/1‑94 (MQ=60)
CAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGT > SRR4302536.1368363/1‑94 (MQ=60)
AGTCACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTC > SRR4302536.930135/1‑94 (MQ=60)
AGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTC > SRR4302536.4908832/1‑94 (MQ=60)
AGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTC > SRR4302536.2227611/1‑94 (MQ=60)
ACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTG < SRR4302536.2346544/94‑1 (MQ=60)
ACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGGCTG > SRR4302536.553939/1‑94 (MQ=60)
CACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGG < SRR4302536.4174304/94‑1 (MQ=60)
CACACCCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGG < SRR4302536.3855409/94‑1 (MQ=60)
ACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCCCGTCTGGT > SRR4302536.4642070/1‑94 (MQ=60)
CACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTG < SRR4302536.5291051/94‑1 (MQ=60)
CACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTG < SRR4302536.4065899/94‑1 (MQ=60)
ACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTTGTGC > SRR4302536.5981478/1‑94 (MQ=60)
ACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGC > SRR4302536.4893123/1‑94 (MQ=60)
ACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGC > SRR4302536.5926602/1‑94 (MQ=60)
CTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCA > SRR4302536.2418547/1‑94 (MQ=60)
TCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCATGCACCGTGACGGCCTGTTTCtgggcccggctagcgccg > SRR4302536.1928152/1‑76 (MQ=60)
CCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGGTTCGGGGCACGTCTGGTGCACG > SRR4302536.45387/1‑94 (MQ=60)
CCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAG > SRR4302536.2204511/1‑94 (MQ=60)
CCGGGACAACACTCCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAG < SRR4302536.3698817/94‑1 (MQ=60)
CGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGG > SRR4302536.3258779/1‑94 (MQ=60)
CGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGG < SRR4302536.1060837/94‑1 (MQ=60)
ggtacaacagctcgagacgaaagtcttGACCGCCCCTGGT‑GGGGCGGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGG < SRR4302536.3363631/67‑1 (MQ=60)
GGACAACACTTCCCGACGACAATCACGACCGCCGCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGT < SRR4302536.2159446/94‑1 (MQ=60)
GGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGT > SRR4302536.6781284/1‑94 (MQ=60)
GGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGG > SRR4302536.4761856/1‑94 (MQ=60)
GGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGG > SRR4302536.4936063/1‑94 (MQ=60)
gcaagcgcctcgcaaaGACAAGCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTA < SRR4302536.1608944/78‑1 (MQ=60)
GACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTA < SRR4302536.4383257/94‑1 (MQ=60)
ACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAA > SRR4302536.1471936/1‑94 (MQ=60)
AACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGGCCTGCACCGTGACGCCCTGTTTCGGGGCACGGCTGGGGCAGGAGGGgagcc > SRR4302536.2669730/1‑89 (MQ=60)
AACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACC > SRR4302536.2981050/1‑94 (MQ=60)
ACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCG > SRR4302536.3436986/1‑94 (MQ=60)
CACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGTCCTGGTTCGGGGgacgtggtggggaggcgggatagcgg > SRR4302536.4554926/1‑68 (MQ=60)
CACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGGAGGAGGGGAACCGG > SRR4302536.3833658/1‑94 (MQ=60)
CTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTT < SRR4302536.4259277/94‑1 (MQ=60)
CTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTT < SRR4302536.5517240/94‑1 (MQ=60)
CTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTT < SRR4302536.626571/94‑1 (MQ=60)
CTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTT < SRR4302536.121435/94‑1 (MQ=60)
CTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCGGTT > SRR4302536.3017809/1‑94 (MQ=60)
TTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTG < SRR4302536.3471569/94‑1 (MQ=60)
TTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTG < SRR4302536.6220717/94‑1 (MQ=60)
TTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTG > SRR4302536.5028741/1‑94 (MQ=60)
TTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTG < SRR4302536.70991/94‑1 (MQ=60)
TCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAAACGGTTGC > SRR4302536.2405873/1‑94 (MQ=60)
TCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCGGTTGC > SRR4302536.2731161/1‑94 (MQ=60)
CCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCA < SRR4302536.1124768/94‑1 (MQ=60)
CCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCA < SRR4302536.6130712/94‑1 (MQ=60)
CCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCA < SRR4302536.6074644/94‑1 (MQ=60)
CCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCAT < SRR4302536.3493585/94‑1 (MQ=60)
CCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCGGTTGCAT > SRR4302536.2998314/1‑94 (MQ=60)
CCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCGGGTGCAT > SRR4302536.2610164/1‑94 (MQ=60)
CGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATT < SRR4302536.1109604/94‑1 (MQ=60)
GACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTA < SRR4302536.882031/94‑1 (MQ=60)
ACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTAC < SRR4302536.6286341/94‑1 (MQ=60)
ACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTAC < SRR4302536.1315424/94‑1 (MQ=60)
GACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGGCGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCT > SRR4302536.5600942/1‑94 (MQ=60)
GACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCT > SRR4302536.6526221/1‑94 (MQ=60)
ACAAGCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTT < SRR4302536.2554717/94‑1 (MQ=60)
CAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTG > SRR4302536.6352330/1‑94 (MQ=60)
AATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGC > SRR4302536.2867809/1‑94 (MQ=60)
AATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGC > SRR4302536.4849460/1‑94 (MQ=60)
AATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGC < SRR4302536.2299931/94‑1 (MQ=60)
AATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGC > SRR4302536.754485/1‑94 (MQ=60)
AATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGC > SRR4302536.6116222/1‑94 (MQ=60)
AATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCGGTTGCATTACCTTGC > SRR4302536.5740711/1‑94 (MQ=60)
ATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCC < SRR4302536.1428765/94‑1 (MQ=60)
ATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCC > SRR4302536.881049/1‑94 (MQ=60)
TCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCG > SRR4302536.3670733/1‑94 (MQ=60)
ccacCCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGAC < SRR4302536.57656/90‑1 (MQ=60)
CGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACC > SRR4302536.2139990/1‑94 (MQ=60)
CGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACC < SRR4302536.3023785/94‑1 (MQ=60)
CGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACC > SRR4302536.1362889/1‑94 (MQ=60)
GACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCG > SRR4302536.4561280/1‑94 (MQ=60)
ACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGC > SRR4302536.5306676/1‑94 (MQ=60)
CCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCG > SRR4302536.6454004/1‑94 (MQ=60)
CCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGG < SRR4302536.3513016/94‑1 (MQ=60)
CCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGG < SRR4302536.1879923/94‑1 (MQ=60)
CCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGT < SRR4302536.4076027/94‑1 (MQ=60)
CTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTA > SRR4302536.1283047/1‑94 (MQ=60)
TGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTAT < SRR4302536.5298705/94‑1 (MQ=60)
gtGGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCA < SRR4302536.4971924/92‑1 (MQ=60)
TGGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAG > SRR4302536.5233698/1‑94 (MQ=60)
GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAGA < SRR4302536.3338588/94‑1 (MQ=60)
GGCTGCCCTGCACCGTGACGGCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAGAGG > SRR4302536.6760914/1‑94 (MQ=60)
GGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAGAGG < SRR4302536.3835522/94‑1 (MQ=60)
GGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAGAGG < SRR4302536.4286272/94‑1 (MQ=60)
GGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAGAGG < SRR4302536.3561944/94‑1 (MQ=60)
GCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGAATCAGAGGC < SRR4302536.1642435/94‑1 (MQ=60)
|
TTCTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTGGGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAGAGGC > NC_000913/2075103‑2075289
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
