Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,247,350 |
T→C |
S97G (AGT→GGT) |
yeiE ← |
putative transcriptional regulator LYSR‑type |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,247,350 | 0 | T | C | 100.0%
| 613.0
/ NA
| 184 | S97G (AGT→GGT) | yeiE | putative transcriptional regulator LYSR‑type |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (77/107); total (77/107) |
Only 100 of 196 total aligned reads displayed.
TATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACTACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGAT > NC_000913/2247260‑2247439
|
accccAACGCTAAGTTCAATCGTCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTg < 2:3657261/91‑1 (MQ=255)
tCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTgg > 1:5658194/1‑93 (MQ=255)
tCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTgg > 1:4851445/1‑93 (MQ=255)
cccAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGc < 1:947347/93‑1 (MQ=255)
cccAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGc < 1:4560883/93‑1 (MQ=255)
cccAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGc < 2:6029534/93‑1 (MQ=255)
ccAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCa > 1:563467/1‑93 (MQ=255)
ccAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCa > 2:3217083/1‑93 (MQ=255)
aaCGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATa < 2:5370438/93‑1 (MQ=255)
aCGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAg > 2:371701/1‑93 (MQ=255)
aCGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAg < 1:1684900/93‑1 (MQ=255)
cGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGa < 1:3728971/93‑1 (MQ=255)
cGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGa < 2:3127685/93‑1 (MQ=255)
cGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGa < 2:731596/93‑1 (MQ=255)
cGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGa < 2:1694997/93‑1 (MQ=255)
cTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATa < 2:2645405/93‑1 (MQ=255)
tAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATAc > 2:5331864/1‑93 (MQ=255)
aGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGa > 1:5507529/1‑93 (MQ=255)
gTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGATTGTAGTTACCGATGGTACCACTGGCATAGATACGaa < 1:2779/93‑1 (MQ=255)
gTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGaa < 1:2739208/93‑1 (MQ=255)
gTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGaa < 2:4382736/93‑1 (MQ=255)
ttCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAAt < 1:5895173/93‑1 (MQ=255)
ttCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAAt < 1:4272014/93‑1 (MQ=255)
tCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATc > 1:5964056/1‑93 (MQ=255)
tCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATc < 1:1850584/93‑1 (MQ=255)
cAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATcg > 1:4705646/1‑93 (MQ=255)
aaTCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATcgc > 2:2416818/1‑93 (MQ=255)
tCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCgcgc < 2:5655866/93‑1 (MQ=255)
ggCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCg > 2:1174245/1‑93 (MQ=255)
gCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGt < 2:2312878/93‑1 (MQ=255)
gCAACTGCGGATAATCATGCCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGt < 2:6221300/93‑1 (MQ=255)
cAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGtt < 2:6362/93‑1 (MQ=255)
cAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGtt > 1:4243580/1‑93 (MQ=255)
cAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGtt < 1:1469141/93‑1 (MQ=255)
aaCTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTg < 1:1626930/93‑1 (MQ=255)
aCTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGt < 1:5477817/93‑1 (MQ=255)
aCTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGt > 2:4935817/1‑93 (MQ=255)
tGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCt < 2:1436376/93‑1 (MQ=255)
tGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCt < 1:6398082/93‑1 (MQ=255)
tGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCt < 1:2123677/93‑1 (MQ=255)
ggATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTcg < 2:919213/93‑1 (MQ=255)
ggATAATCATGGCGATAACAGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTcg > 2:2259682/1‑93 (MQ=255)
gATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTcgc < 2:3839336/93‑1 (MQ=255)
gATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTcgc > 2:5434697/1‑93 (MQ=255)
aTAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATGGGGCCGTTGTCTTcgcg > 1:5090435/1‑93 (MQ=255)
aTAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTcgcg < 2:848705/93‑1 (MQ=255)
tAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGa > 2:6687756/1‑93 (MQ=255)
tAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGa > 1:6143598/1‑93 (MQ=255)
aTCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGaaa > 1:5820087/1‑93 (MQ=255)
tCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAAc > 2:938106/1‑93 (MQ=255)
tCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAAc < 2:3040311/93‑1 (MQ=255)
aTGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAg > 1:1304872/1‑93 (MQ=255)
aTGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAg < 1:2394106/93‑1 (MQ=255)
ggCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAgtt < 1:810975/93‑1 (MQ=255)
gCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAgttg > 1:2106851/1‑93 (MQ=255)
cGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAgttgt < 1:4799535/93‑1 (MQ=255)
gATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAgttgtt < 1:1069039/93‑1 (MQ=255)
aTAACGGGCGATAACTGCAGGCAGATTGTAGTTACCGATGGTACCACTGGCATAGATACTAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTc < 1:532992/93‑1 (MQ=255)
aTAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAgttgttg > 1:4713959/1‑92 (MQ=255)
tAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCg < 2:4162928/93‑1 (MQ=255)
aaCGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGa < 1:2965227/93‑1 (MQ=255)
aCGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGAt < 1:4445692/93‑1 (MQ=255)
cGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGAtt < 1:4108786/93‑1 (MQ=255)
gggCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGAttt > 2:4526489/1‑93 (MQ=255)
gggCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGAttt > 1:1657155/1‑93 (MQ=255)
aTAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAAcc > 2:6471600/1‑93 (MQ=255)
aTAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAAcc > 1:5560767/1‑93 (MQ=255)
aTAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAAcc > 2:1491105/1‑93 (MQ=255)
tAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCg > 2:1199953/1‑93 (MQ=255)
tAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCg > 1:5126089/1‑93 (MQ=255)
tAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCg > 1:5574816/1‑93 (MQ=255)
aCTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGcc < 2:4216881/93‑1 (MQ=255)
aCTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGcc > 2:2307702/1‑93 (MQ=255)
cTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCt < 1:3590749/93‑1 (MQ=255)
cTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCt > 1:1138484/1‑93 (MQ=255)
cTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCt > 1:6027957/1‑93 (MQ=255)
cTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCt > 2:2453933/1‑93 (MQ=255)
tGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTg < 1:328436/93‑1 (MQ=255)
tGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTg < 2:5821879/93‑1 (MQ=255)
gcaggcagAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGt < 2:4763049/93‑1 (MQ=255)
gcaggcagAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGt < 2:5059279/93‑1 (MQ=255)
gcaggcagAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGt < 2:3468867/93‑1 (MQ=255)
aggcagAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTc < 2:589936/93‑1 (MQ=255)
aggcagAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGCTCGATTTCAACCGCCTGTTc > 2:6314480/1‑93 (MQ=255)
ggcagAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCa < 2:1829107/93‑1 (MQ=255)
agAATGTAGTTACCGATGTTACCACTGTCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGc < 1:4754420/93‑1 (MQ=255)
gAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCa > 1:5463325/1‑93 (MQ=255)
aaTGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCaa < 1:2590680/93‑1 (MQ=255)
tGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATg > 2:5177461/1‑93 (MQ=255)
tAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGcc < 1:3545867/93‑1 (MQ=255)
tAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGcc < 1:392769/93‑1 (MQ=255)
ttACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAac < 2:294714/93‑1 (MQ=255)
tACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAacg > 1:6518574/1‑93 (MQ=255)
ccGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCTACCGCCTGTTCAAGCAATGCCAccgca > 2:4066766/1‑93 (MQ=255)
gATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAacgcacg > 2:663444/1‑93 (MQ=255)
ggTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCgg < 1:2870487/93‑1 (MQ=255)
gTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGa < 1:3620893/93‑1 (MQ=255)
gTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGa < 2:4237285/93‑1 (MQ=255)
taccacTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGAt < 2:2091751/93‑1 (MQ=255)
taccacTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGAt > 2:163160/1‑93 (MQ=255)
|
TATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACTACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGAT > NC_000913/2247260‑2247439
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCTATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACTACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGATAGAG > NC_000913/2247258‑2247443
|
GCTATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCA < SRR4302536.4836477/94‑1 (MQ=60)
GCTATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAAAGGGCGATAACTGCAGGCAGAAGGTAGTTACCCATGGTACCA > SRR4302536.3364901/1‑94 (MQ=60)
ATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTG < SRR4302536.2088623/94‑1 (MQ=60)
TTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGG > SRR4302536.5826363/1‑94 (MQ=60)
TTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGG > SRR4302536.4997428/1‑94 (MQ=60)
CCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCA < SRR4302536.975337/94‑1 (MQ=60)
CCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCA > SRR4302536.577820/1‑94 (MQ=60)
CCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCA < SRR4302536.4697710/94‑1 (MQ=60)
CCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCAT < SRR4302536.6556177/94‑1 (MQ=60)
ACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGA > SRR4302536.4455415/1‑94 (MQ=60)
ACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGA < SRR4302536.1733718/94‑1 (MQ=60)
CGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCTCTGGCATAGAT < SRR4302536.3248871/94‑1 (MQ=60)
CGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGAT < SRR4302536.3840422/94‑1 (MQ=60)
CGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGAT < SRR4302536.4995102/94‑1 (MQ=60)
CGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGAT > SRR4302536.4159210/1‑94 (MQ=60)
CGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGAT < SRR4302536.2826770/94‑1 (MQ=60)
CTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATAC > SRR4302536.1724157/1‑94 (MQ=60)
TAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACG < SRR4302536.616916/94‑1 (MQ=60)
TAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACG > SRR4302536.660016/1‑94 (MQ=60)
AAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGA > SRR4302536.5671827/1‑94 (MQ=60)
GTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGATTGTAGTTACCGATGGTACCACTGGCATAGATACGAAT < SRR4302536.2856/94‑1 (MQ=60)
GTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAAT < SRR4302536.2820820/94‑1 (MQ=60)
GTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAAT < SRR4302536.517021/94‑1 (MQ=60)
TTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGGTGGTACCACTGGCATAGATACGAATC < SRR4302536.5825671/94‑1 (MQ=60)
TTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATC < SRR4302536.4399360/94‑1 (MQ=60)
TTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATC > SRR4302536.6141802/1‑94 (MQ=60)
TTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATC < SRR4302536.6070721/94‑1 (MQ=60)
TCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCG < SRR4302536.1179355/94‑1 (MQ=60)
TCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCG < SRR4302536.5642081/94‑1 (MQ=60)
TCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCG < SRR4302536.1906355/94‑1 (MQ=60)
TCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCG > SRR4302536.4847152/1‑94 (MQ=60)
AATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCG > SRR4302536.5799559/1‑94 (MQ=60)
AATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCG < SRR4302536.5682160/94‑1 (MQ=60)
GCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTT > SRR4302536.4369952/1‑94 (MQ=60)
GCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTT < SRR4302536.5979222/94‑1 (MQ=60)
CAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCTCGCCGTTG > SRR4302536.5730828/1‑94 (MQ=60)
CAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTG < SRR4302536.1512607/94‑1 (MQ=60)
AACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGT > SRR4302536.3767748/1‑94 (MQ=60)
AACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGT < SRR4302536.1674293/94‑1 (MQ=60)
ACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTC < SRR4302536.5641419/94‑1 (MQ=60)
CTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCT < SRR4302536.5507024/94‑1 (MQ=60)
CTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCT < SRR4302536.1704795/94‑1 (MQ=60)
TGCGGATAATCATGGCGATAACGGGCGATACCTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGGTGTCTT > SRR4302536.2678279/1‑94 (MQ=60)
TGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTT < SRR4302536.4926634/94‑1 (MQ=60)
TGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTT < SRR4302536.2187482/94‑1 (MQ=60)
TGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTT < SRR4302536.6589012/94‑1 (MQ=60)
TGCGAATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCTCTGGCATAGATACGAATCGCGCCGTTGTCTT < SRR4302536.2451495/94‑1 (MQ=60)
GCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTC < SRR4302536.3953299/94‑1 (MQ=60)
CGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCG > SRR4302536.4872660/1‑94 (MQ=60)
GATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATGGGGCCGTTGTCTTCGCG > SRR4302536.5242684/1‑94 (MQ=60)
ATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGA > SRR4302536.6326657/1‑94 (MQ=60)
TAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAA > SRR4302536.478343/1‑94 (MQ=60)
AATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAA > SRR4302536.5993471/1‑94 (MQ=60)
AATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAA > SRR4302536.2571540/1‑94 (MQ=60)
CATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAG > SRR4302536.1343840/1‑94 (MQ=60)
CATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAG < SRR4302536.1785097/94‑1 (MQ=60)
ATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGT < SRR4302536.2466577/94‑1 (MQ=60)
GGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTG < SRR4302536.834756/94‑1 (MQ=60)
GGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTG > SRR4302536.2170168/1‑94 (MQ=60)
CGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTT < SRR4302536.4943994/94‑1 (MQ=60)
CGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAAACGCGCCGTTGTCTTCGCGAAACAGTTGTT > SRR4302536.3002634/1‑94 (MQ=60)
GATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTG > SRR4302536.4855763/1‑94 (MQ=60)
GATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTC < SRR4302536.1101005/94‑1 (MQ=60)
GATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTC < SRR4302536.3423493/94‑1 (MQ=60)
ATAACGGGCGATAACTGCAGGCAGATTGTAGTTACCGATGGTACCACTGGCATAGATACTAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCG < SRR4302536.546610/94‑1 (MQ=60)
ATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGCCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCG < SRR4302536.661586/94‑1 (MQ=60)
TAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGT > SRR4302536.48392/1‑94 (MQ=60)
AACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGAT < SRR4302536.6917352/94‑1 (MQ=60)
AACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGAT < SRR4302536.3052567/94‑1 (MQ=60)
ACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATT < SRR4302536.4579189/94‑1 (MQ=60)
CGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTT > SRR4302536.1705287/1‑94 (MQ=60)
CGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTT < SRR4302536.4230685/94‑1 (MQ=60)
CGGGCGACAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTT > SRR4302536.6049149/1‑94 (MQ=60)
CGGCCGATAACTGCAGGCAGAATGTAGTTACCGATGGTCCCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGGTGTTCGATTT < SRR4302536.3943019/94‑1 (MQ=60)
GATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACC < SRR4302536.6244557/94‑1 (MQ=60)
GATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACC > SRR4302536.5726366/1‑94 (MQ=60)
ATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCG > SRR4302536.5279244/1‑94 (MQ=60)
ATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCG < SRR4302536.2929451/94‑1 (MQ=60)
ATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCG > SRR4302536.5740764/1‑94 (MQ=60)
AACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCC > SRR4302536.1542440/1‑94 (MQ=60)
AGTGCAGGCAGATTGTAGTTACGGATGGCACGAGTGGCAGAGATGGGAAGCGCGCCGTTGTCTTCGCGACACCGTTGTTCGATTTCAACCGCCT < SRR4302536.4798333/94‑1 (MQ=28)
ACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCT > SRR4302536.1172712/1‑94 (MQ=60)
ACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCT > SRR4302536.6207689/1‑94 (MQ=60)
CTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTG < SRR4302536.3698164/94‑1 (MQ=60)
CTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTG < SRR4302536.4373868/94‑1 (MQ=60)
TGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGT < SRR4302536.337156/94‑1 (MQ=60)
GCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTT > SRR4302536.3710415/1‑94 (MQ=60)
GGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAA < SRR4302536.5268002/94‑1 (MQ=60)
AGAATGTAGTTACCGATGTTACCACTGTCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCA < SRR4302536.4897552/94‑1 (MQ=60)
AGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCA > SRR4302536.5626622/1‑94 (MQ=60)
AATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAAT < SRR4302536.5635122/94‑1 (MQ=60)
AATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAAT < SRR4302536.2668477/94‑1 (MQ=60)
TAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCA < SRR4302536.403141/94‑1 (MQ=60)
TAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCA < SRR4302536.3651873/94‑1 (MQ=60)
GTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAAC < SRR4302536.5294034/94‑1 (MQ=60)
GTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAAC < SRR4302536.1349221/94‑1 (MQ=60)
TTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACG < SRR4302536.4233913/94‑1 (MQ=60)
TTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACG > SRR4302536.6712771/1‑94 (MQ=60)
TTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACG > SRR4302536.6095452/1‑94 (MQ=60)
TTACCGATGGTACCACTGGCATAGATACGAATCGAGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACG < SRR4302536.880392/94‑1 (MQ=60)
ACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCA > SRR4302536.2177204/1‑94 (MQ=60)
CGATGGTACCAGTGGCATAGCCACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACG < SRR4302536.3693414/94‑1 (MQ=60)
ATGGTACCACTGGCATAGATACGAATCGCCCCGTTGTCCTCGCGAAACAGCTGTTCGATTTCAACCGCCTGCACAAGCACTGCCCACGCAC‑CGG > SRR4302536.6248513/1‑94 (MQ=57)
GGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGA < SRR4302536.2955247/94‑1 (MQ=60)
GTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGAT < SRR4302536.3729153/94‑1 (MQ=60)
CCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGATAGA < SRR4302536.641325/94‑1 (MQ=60)
CCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGATAGA < SRR4302536.78731/94‑1 (MQ=60)
CACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGATAGAG > SRR4302536.5994564/1‑94 (MQ=60)
CACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGATAGAG > SRR4302536.5693723/1‑94 (MQ=60)
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GCTATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACTACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGATAGAG > NC_000913/2247258‑2247443
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
