Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,268,593 |
T→C |
intergenic (+28/‑153) |
spr → / → rtn |
putative lipoprotein/hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,268,593 | 0 | T | C | 100.0%
| 946.4
/ NA
| 284 | intergenic (+28/‑153) | spr/rtn | putative lipoprotein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (133/151); total (133/151) |
Only 100 of 287 total aligned reads displayed.
ATGAATGAACCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCTATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCTTGATCCA > NC_000913/2268503‑2268682
|
atgaatgaACCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCAt > 1:964317/1‑93 (MQ=255)
gaatgaaCCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATcc < 1:4291953/93‑1 (MQ=255)
atgaaCCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTg > 1:1000720/1‑93 (MQ=255)
atgaaCCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTg > 1:5376928/1‑93 (MQ=255)
atgaaCCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTg > 2:2724051/1‑93 (MQ=255)
atgaaCCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGATCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCCTCCTg > 1:312994/1‑93 (MQ=255)
tgaaCCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGa < 1:2656639/93‑1 (MQ=255)
gaaCCGTACTGGAAGAAGCGTTACCACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGAc > 1:6460668/1‑93 (MQ=255)
ccGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAg > 1:5077476/1‑93 (MQ=255)
ccGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAg > 2:4983670/1‑93 (MQ=255)
cGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGt < 1:2361115/93‑1 (MQ=255)
gTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTCTGGATGCAATCCCTTGGCCATCCTGACGAGtt > 1:6678566/1‑93 (MQ=255)
tACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTa > 1:3167604/1‑93 (MQ=255)
cTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAAc < 1:2718018/93‑1 (MQ=255)
cTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAAc > 1:1344251/1‑93 (MQ=255)
tGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACt > 2:2553529/1‑93 (MQ=255)
ggAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTg > 1:557427/1‑93 (MQ=255)
agCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCa < 1:252604/93‑1 (MQ=255)
agCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCa < 1:3511556/93‑1 (MQ=255)
gCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAATCCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCAc < 2:3914467/93‑1 (MQ=255)
gCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCAc < 1:258974/93‑1 (MQ=255)
cGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACt < 1:5988285/93‑1 (MQ=255)
ttACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGc > 2:6443779/1‑93 (MQ=255)
ttACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGc < 2:2354949/93‑1 (MQ=255)
tACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCt > 1:4022975/1‑93 (MQ=255)
aaCGAAGCACGCTGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAg < 2:2476875/93‑1 (MQ=255)
aaCGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAg < 2:1300757/93‑1 (MQ=255)
aCGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAgg < 2:925515/93‑1 (MQ=255)
cGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGGTAACTGAAAGCACTGCTTAGGc > 1:4648583/1‑93 (MQ=255)
gAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCa < 2:1365866/93‑1 (MQ=255)
gAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCa < 1:4806069/93‑1 (MQ=255)
gAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCa < 2:6114945/93‑1 (MQ=255)
gAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCa < 2:863059/93‑1 (MQ=255)
aGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGt > 1:410159/1‑93 (MQ=255)
aGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGt < 1:539164/93‑1 (MQ=255)
aCGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCt < 2:5244225/93‑1 (MQ=255)
aCGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCt > 1:2248803/1‑93 (MQ=255)
ccGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCtttt > 1:2019984/1‑93 (MQ=255)
ccGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCtttt < 1:741526/93‑1 (MQ=255)
ccGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCtttt < 1:5616329/93‑1 (MQ=255)
ccGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCtttt < 2:4938069/93‑1 (MQ=255)
cGGTTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCttttt < 1:5709468/93‑1 (MQ=255)
cGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTACCTGAAAGCACTGCTTAGGCAGTGCttttt < 2:580445/93‑1 (MQ=255)
cGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCttttt < 2:1922997/93‑1 (MQ=255)
gggTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCtttttt > 1:1154680/1‑93 (MQ=255)
tctcAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGttt < 2:5387975/93‑1 (MQ=255)
ctcAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGtttt < 1:901748/93‑1 (MQ=255)
cAGCCGCAGCTAATCAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTttca < 1:6209680/93‑1 (MQ=255)
cAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTttca > 2:1457050/1‑93 (MQ=255)
cAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTttca < 1:3943568/93‑1 (MQ=255)
aGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTttcat < 2:2712241/93‑1 (MQ=255)
aGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTttcat < 1:3009002/93‑1 (MQ=255)
gCCGCAGCTAATAGACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTttcatt < 2:3798535/93‑1 (MQ=255)
gCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTttcatt > 2:4912347/1‑93 (MQ=255)
gCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTttcatt < 1:1668964/93‑1 (MQ=255)
gCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTttcatt > 1:2475846/1‑93 (MQ=255)
gCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTttcatt < 2:262221/93‑1 (MQ=255)
ccGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTttcattc < 2:3266171/93‑1 (MQ=255)
ccGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTttcattc > 1:4445861/1‑93 (MQ=255)
ccGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTttcattc < 2:1689535/93‑1 (MQ=255)
cGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTttcattca > 2:774874/1‑93 (MQ=255)
cGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTttcattca < 1:5189681/93‑1 (MQ=255)
aGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATtcatca < 2:2089263/93‑1 (MQ=255)
gCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCag < 1:861070/93‑1 (MQ=255)
gCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCag > 1:4873606/1‑93 (MQ=255)
cTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCaga < 1:1404618/93‑1 (MQ=255)
taataaACCGTTTGGATGCTATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCagag > 1:6566346/1‑93 (MQ=255)
taataaACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCagag > 2:400240/1‑93 (MQ=255)
taataaACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCagag > 2:6027129/1‑93 (MQ=255)
aataaACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAgaga > 1:1537988/1‑93 (MQ=255)
aataaACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAgaga > 2:4538652/1‑93 (MQ=255)
aataaACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAgaga < 2:2224826/93‑1 (MQ=255)
aataaACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAgaga < 2:43388/93‑1 (MQ=255)
ataaACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGaa < 2:1185964/93‑1 (MQ=255)
ataaACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGaa > 2:2178049/1‑93 (MQ=255)
taaACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGaaa < 1:2289331/93‑1 (MQ=255)
taaACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGaaa > 1:4999713/1‑93 (MQ=255)
aaaCCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGaaaa < 1:1649523/93‑1 (MQ=255)
aaCCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAat < 1:1268548/93‑1 (MQ=255)
aaCCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAat < 1:5865961/93‑1 (MQ=255)
aaCCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAat < 2:3840870/93‑1 (MQ=255)
ccGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAatga < 2:3554228/93‑1 (MQ=255)
gTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAatgatg < 1:3414675/93‑1 (MQ=255)
gTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAatgatg > 2:4681908/1‑93 (MQ=255)
tttGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGt > 1:6293162/1‑93 (MQ=255)
ggATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTc < 1:4927060/93‑1 (MQ=255)
tGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCcgc > 2:636495/1‑93 (MQ=255)
cAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGt > 2:3084748/1‑93 (MQ=255)
cAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGt > 1:1579261/1‑93 (MQ=255)
aaTCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTc > 2:5503554/1‑93 (MQ=255)
aaTCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTc < 2:4093817/93‑1 (MQ=255)
aTCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCt > 1:1839579/1‑93 (MQ=255)
aTCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCt > 2:651020/1‑93 (MQ=255)
tCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCtt < 1:3628899/93‑1 (MQ=255)
ccTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCTTGa < 2:2972508/93‑1 (MQ=255)
ccTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCTTGa > 2:6642925/1‑93 (MQ=255)
ccTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCTTGa < 1:5640462/93‑1 (MQ=255)
cTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCTTGAt < 1:2963857/93‑1 (MQ=255)
cTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCTTGAt < 1:632236/93‑1 (MQ=255)
ggCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCTTGATCCa < 2:3669831/93‑1 (MQ=255)
|
ATGAATGAACCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCTATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCTTGATCCA > NC_000913/2268503‑2268682
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGCATGAATGAACCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCTATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCTTGATCCAGGCT > NC_000913/2268500‑2268686
|
AGCATGAATGAACCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCC > SRR4302536.1459814/1‑94 (MQ=60)
AGAATGAATGAACCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCC < SRR4302536.6304448/94‑1 (MQ=60)
GCATGAATGAACCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCA < SRR4302536.2148222/94‑1 (MQ=60)
CATGAATGAACCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCAT > SRR4302536.992800/1‑94 (MQ=60)
CATGAATGAACCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCAT > SRR4302536.1400544/1‑94 (MQ=60)
ATGAATGAACCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATC > SRR4302536.5800518/1‑94 (MQ=60)
TGAATGAACCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCC > SRR4302536.2451384/1‑94 (MQ=60)
GAATGAACCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCT < SRR4302536.4420219/94‑1 (MQ=60)
AATGAACCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTG > SRR4302536.1030246/1‑94 (MQ=60)
AATGAACCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTG < SRR4302536.5861885/94‑1 (MQ=60)
AATGAACCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTG < SRR4302536.1638488/94‑1 (MQ=60)
AATGAACCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTG > SRR4302536.5537339/1‑94 (MQ=60)
AATGAACCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGATCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCCTCCTG > SRR4302536.321284/1‑94 (MQ=60)
TGAACCGTACTGGAAGAAGCGTTACCACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGAC > SRR4302536.6653545/1‑94 (MQ=60)
TGAACCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGAC < SRR4302536.2736159/94‑1 (MQ=60)
GAACCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACG < SRR4302536.3813105/94‑1 (MQ=60)
ACCTTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAG < SRR4302536.4106357/94‑1 (MQ=60)
ACCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAG < SRR4302536.5765316/94‑1 (MQ=60)
ACCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAG < SRR4302536.6863071/94‑1 (MQ=60)
ACCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAG > SRR4302536.5229443/1‑94 (MQ=60)
CGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTT < SRR4302536.2432702/94‑1 (MQ=60)
CGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTCTGGATGCAATCCCTTGGCCATCCTGACGAGTT > SRR4302536.6876982/1‑94 (MQ=60)
GTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTA > SRR4302536.3260405/1‑94 (MQ=60)
GTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTA > SRR4302536.5800271/1‑94 (MQ=60)
ACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGGGTTAAC > SRR4302536.5597773/1‑94 (MQ=60)
ACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAAC > SRR4302536.1384332/1‑94 (MQ=60)
CTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACT < SRR4302536.2799092/94‑1 (MQ=60)
CTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACT < SRR4302536.3014432/94‑1 (MQ=60)
CTGAAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACT < SRR4302536.50093/94‑1 (MQ=60)
TGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTG > SRR4302536.571626/1‑94 (MQ=60)
TGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTG < SRR4302536.6697616/94‑1 (MQ=60)
TGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTG > SRR4302536.3182615/1‑94 (MQ=60)
TGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTG < SRR4302536.5412419/94‑1 (MQ=60)
GGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGA < SRR4302536.5090908/94‑1 (MQ=60)
GGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGA > SRR4302536.914516/1‑94 (MQ=60)
GGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGA > SRR4302536.6218980/1‑94 (MQ=60)
GAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAA < SRR4302536.1827152/94‑1 (MQ=60)
GAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAA > SRR4302536.956298/1‑94 (MQ=60)
AAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCGTCCTGACGAGTTAACTGAAA > SRR4302536.2760978/1‑94 (MQ=60)
AAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCA > SRR4302536.2785282/1‑94 (MQ=60)
AAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCA > SRR4302536.5099825/1‑94 (MQ=60)
AGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCAC < SRR4302536.3616396/94‑1 (MQ=60)
AGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCAC < SRR4302536.259351/94‑1 (MQ=60)
GCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACT < SRR4302536.5693737/94‑1 (MQ=60)
GCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACT < SRR4302536.265890/94‑1 (MQ=60)
GCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACT < SRR4302536.2153985/94‑1 (MQ=60)
CGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTG < SRR4302536.6166815/94‑1 (MQ=60)
CGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTG > SRR4302536.1621149/1‑94 (MQ=60)
CGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTG > SRR4302536.4823952/1‑94 (MQ=60)
TTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCT < SRR4302536.2681497/94‑1 (MQ=60)
TTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCT > SRR4302536.4142335/1‑94 (MQ=60)
TTACAACGAAGCACGCCGGATTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCT < SRR4302536.4368844/94‑1 (MQ=60)
ACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTA < SRR4302536.2562994/94‑1 (MQ=60)
ACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTA < SRR4302536.1864769/94‑1 (MQ=60)
CAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAG > SRR4302536.5846762/1‑94 (MQ=60)
CAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAG < SRR4302536.3825449/94‑1 (MQ=60)
AACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGG > SRR4302536.504541/1‑94 (MQ=60)
AACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGG < SRR4302536.3143103/94‑1 (MQ=60)
ACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGGTAACTGAAAGCACTGCTTAGGC > SRR4302536.4788339/1‑94 (MQ=60)
CGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCA > SRR4302536.1442752/1‑94 (MQ=60)
GAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAG < SRR4302536.1478406/94‑1 (MQ=60)
GAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAG < SRR4302536.4950731/94‑1 (MQ=60)
AAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGT > SRR4302536.420983/1‑94 (MQ=60)
AAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGT < SRR4302536.2311329/94‑1 (MQ=60)
AAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGT > SRR4302536.3482533/1‑94 (MQ=60)
AGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTG < SRR4302536.552922/94‑1 (MQ=60)
AGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTG > SRR4302536.804618/1‑94 (MQ=60)
AGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTG < SRR4302536.3221790/94‑1 (MQ=60)
AGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAACCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTG < SRR4302536.4987616/94‑1 (MQ=60)
GCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGC < SRR4302536.5889995/94‑1 (MQ=60)
GCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGC < SRR4302536.1568778/94‑1 (MQ=60)
CACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCT < SRR4302536.1209484/94‑1 (MQ=60)
CACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCT > SRR4302536.2316878/1‑94 (MQ=60)
CCGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTT < SRR4302536.535099/94‑1 (MQ=60)
ACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTT < SRR4302536.2612588/94‑1 (MQ=60)
GCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTT > SRR4302536.1946417/1‑94 (MQ=60)
GCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTT > SRR4302536.2080778/1‑94 (MQ=60)
CCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTT > SRR4302536.5164549/1‑94 (MQ=60)
CCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTT < SRR4302536.763294/94‑1 (MQ=60)
CCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTT < SRR4302536.5783161/94‑1 (MQ=60)
CGGTTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTT < SRR4302536.5879261/94‑1 (MQ=60)
CGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTT > SRR4302536.1189434/1‑94 (MQ=60)
CGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTT > SRR4302536.4349463/1‑94 (MQ=60)
CGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTT < SRR4302536.6121241/94‑1 (MQ=60)
CGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTT > SRR4302536.5548317/1‑94 (MQ=60)
GGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTG < SRR4302536.4809250/94‑1 (MQ=60)
GGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTG > SRR4302536.3676898/1‑94 (MQ=60)
GGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTG > SRR4302536.4453244/1‑94 (MQ=60)
GGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGT > SRR4302536.4996884/1‑94 (MQ=60)
GTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTT < SRR4302536.4113278/94‑1 (MQ=60)
TTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTT < SRR4302536.2386988/94‑1 (MQ=60)
TTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTT > SRR4302536.6659453/1‑94 (MQ=60)
CTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTC < SRR4302536.928316/94‑1 (MQ=60)
CTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTC < SRR4302536.2319382/94‑1 (MQ=60)
CTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTC > SRR4302536.6543324/1‑94 (MQ=60)
CAGCCGCAGCTAATCAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCAT < SRR4302536.6394682/94‑1 (MQ=60)
CAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCAT < SRR4302536.4060728/94‑1 (MQ=60)
AGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATT > SRR4302536.5741574/1‑94 (MQ=60)
AGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATT < SRR4302536.1688831/94‑1 (MQ=60)
AGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATT < SRR4302536.3097455/94‑1 (MQ=60)
AGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATT > SRR4302536.2550578/1‑94 (MQ=60)
GCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTC < SRR4302536.1717382/94‑1 (MQ=60)
GCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTC < SRR4302536.716636/94‑1 (MQ=60)
GCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTC > SRR4302536.4579362/1‑94 (MQ=60)
GCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTC < SRR4302536.4434211/94‑1 (MQ=60)
CGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCAT < SRR4302536.5344452/94‑1 (MQ=60)
CAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCA > SRR4302536.4778353/1‑94 (MQ=60)
AGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAG > SRR4302536.5020223/1‑94 (MQ=60)
GCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGA < SRR4302536.6481514/94‑1 (MQ=60)
GCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGA < SRR4302536.886382/94‑1 (MQ=60)
CTAATAAACCGTTTGGATGCTATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAG > SRR4302536.6761789/1‑94 (MQ=60)
CTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCGCTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAG > SRR4302536.6512614/1‑94 (MQ=60)
CTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAG > SRR4302536.2968035/1‑94 (MQ=60)
CTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAG > SRR4302536.3609779/1‑94 (MQ=60)
CTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAG < SRR4302536.1446394/94‑1 (MQ=60)
CTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAG > SRR4302536.5300602/1‑94 (MQ=60)
TAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGA > SRR4302536.1583217/1‑94 (MQ=60)
AATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAA < SRR4302536.3241374/94‑1 (MQ=60)
AATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAA > SRR4302536.956224/1‑94 (MQ=60)
ATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAA > SRR4302536.5149743/1‑94 (MQ=60)
ATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAA > SRR4302536.3059583/1‑94 (MQ=60)
TAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAA > SRR4302536.1217874/1‑94 (MQ=60)
TAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAA < SRR4302536.2358768/94‑1 (MQ=60)
AAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAAT < SRR4302536.5230768/94‑1 (MQ=60)
AAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAAT < SRR4302536.1697472/94‑1 (MQ=60)
AACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATG > SRR4302536.3640176/1‑94 (MQ=60)
AACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATG < SRR4302536.1306554/94‑1 (MQ=60)
AACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATG < SRR4302536.6040749/94‑1 (MQ=60)
CCGTTTGGATGCAATCCCTTGGTCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGAT < SRR4302536.5213189/94‑1 (MQ=60)
CCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGAT > SRR4302536.857029/1‑94 (MQ=60)
GTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGT > SRR4302536.6480656/1‑94 (MQ=60)
GTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGT < SRR4302536.3516285/94‑1 (MQ=60)
GTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGT > SRR4302536.2352799/1‑94 (MQ=60)
GTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTGTTTTGTTTTCATTCATCAGAGAAAATGATGT < SRR4302536.1955129/94‑1 (MQ=60)
TTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTT < SRR4302536.2380077/94‑1 (MQ=60)
TTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTT < SRR4302536.6489196/94‑1 (MQ=60)
TGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTC > SRR4302536.6086196/1‑94 (MQ=60)
GGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCC < SRR4302536.6901069/94‑1 (MQ=60)
GGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCC < SRR4302536.3084193/94‑1 (MQ=60)
GGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCC > SRR4302536.4218330/1‑94 (MQ=60)
GGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCC < SRR4302536.5075099/94‑1 (MQ=60)
GATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGCGAAAATGATGTTTACG > SRR4302536.1034494/1‑94 (MQ=60)
GATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCG > SRR4302536.1363205/1‑94 (MQ=60)
GATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCG < SRR4302536.335346/94‑1 (MQ=60)
ATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGC > SRR4302536.1707485/1‑94 (MQ=60)
ATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGC > SRR4302536.645245/1‑94 (MQ=60)
ATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGA > SRR4302536.6838485/1‑94 (MQ=60)
GCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGT > SRR4302536.1625524/1‑94 (MQ=60)
CAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTC > SRR4302536.6188573/1‑94 (MQ=60)
CAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTC > SRR4302536.2534660/1‑94 (MQ=60)
AATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCT > SRR4302536.1895045/1‑94 (MQ=60)
AATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCT < SRR4302536.4204103/94‑1 (MQ=60)
AATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCT < SRR4302536.2569915/94‑1 (MQ=60)
TCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTGTTG > SRR4302536.6008049/1‑94 (MQ=60)
TCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCTTG < SRR4302536.3737432/94‑1 (MQ=60)
TCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCTTG > SRR4302536.1315922/1‑94 (MQ=60)
CCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCTTGAT < SRR4302536.2679587/94‑1 (MQ=60)
CCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCTTGAT < SRR4302536.5808042/94‑1 (MQ=60)
CTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCTTGATC < SRR4302536.3051161/94‑1 (MQ=60)
CTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCTTGATC > SRR4302536.1607955/1‑94 (MQ=60)
CTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCTTGATC < SRR4302536.650944/94‑1 (MQ=60)
GCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCTTGATCCAGG > SRR4302536.2192620/1‑94 (MQ=60)
GCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCTTGATCCAGG > SRR4302536.3753087/1‑94 (MQ=60)
CATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCTTGATCCAGGCT < SRR4302536.6172147/94‑1 (MQ=60)
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AGCATGAATGAACCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCTATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCTTGATCCAGGCT > NC_000913/2268500‑2268686
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
