Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,327,687 |
A→G |
V44A (GTG→GCG) |
b2226 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,327,687 | 0 | A | G | 100.0%
| 665.3
/ NA
| 206 | V44A (GTG→GCG) | b2226 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (125/81); total (125/81) |
Only 100 of 212 total aligned reads displayed.
GGGTATCCTCCAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCACGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGTGTTGGCAGA > NC_000913/2327598‑2327776
|
gggTATCCTCCAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCgcgc > 2:1865977/1‑93 (MQ=255)
ggTATCCTCCAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGcc > 2:3663758/1‑93 (MQ=255)
ggTATCCTCCAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGcc < 2:4207639/93‑1 (MQ=255)
gTATCCTCCAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCt > 2:3300110/1‑93 (MQ=255)
tATCCTCCAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCtg < 1:5968144/93‑1 (MQ=255)
aTCCTCCAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCtga < 1:5138224/93‑1 (MQ=255)
aTCCTCCAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCtga > 2:5933820/1‑93 (MQ=255)
tcctccAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCtgat > 2:75467/1‑93 (MQ=255)
tcctccAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCtgat > 2:2806674/1‑93 (MQ=255)
tcctccAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCtgat > 1:2347425/1‑93 (MQ=255)
tcctccAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCtgat > 2:5050626/1‑93 (MQ=255)
cctccAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCtgatg > 1:4630401/1‑93 (MQ=255)
cctccAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCtgatg < 1:4468698/93‑1 (MQ=255)
cctccAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCtgatg < 2:5254010/93‑1 (MQ=255)
ctccAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCtgatga > 1:6275632/1‑93 (MQ=255)
ctccAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCtgatga < 1:1826528/93‑1 (MQ=255)
tccAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATgac > 2:6514600/1‑93 (MQ=255)
cagccagGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATgacga > 1:5930982/1‑93 (MQ=255)
agccagGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATgacgac > 1:3606896/1‑93 (MQ=255)
gccagGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACa < 2:4787904/93‑1 (MQ=255)
gccagGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACa < 2:5125826/93‑1 (MQ=255)
ccagGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAg > 2:4482471/1‑93 (MQ=255)
cagGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGc > 2:4104991/1‑93 (MQ=255)
cagGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGc > 2:6111895/1‑93 (MQ=255)
cagGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTCTGGTCGCGCCTGATGACGACAGc > 1:6100971/1‑93 (MQ=255)
agGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCt < 2:6554928/93‑1 (MQ=255)
agGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCt < 2:6182763/93‑1 (MQ=255)
ggCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTg > 2:4746694/1‑93 (MQ=255)
ggCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTg > 1:988930/1‑93 (MQ=255)
gCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGa < 2:2090583/93‑1 (MQ=255)
gTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATa > 2:2005679/1‑93 (MQ=255)
gTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATa < 1:2607930/93‑1 (MQ=255)
aaaCATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCCGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACa > 1:3390816/1‑93 (MQ=255)
aaaCATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACa > 2:5391895/1‑93 (MQ=255)
aaaCATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACa > 2:4437055/1‑93 (MQ=255)
aaCATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAg > 1:5467385/1‑93 (MQ=255)
aaCATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAg > 2:3631906/1‑93 (MQ=255)
aaCATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAg < 2:1394296/93‑1 (MQ=255)
aCATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGt < 1:1993326/93‑1 (MQ=255)
aTACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTg > 2:4188338/1‑93 (MQ=255)
aTACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTg > 2:1729607/1‑93 (MQ=255)
aCAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGAt < 2:2155163/93‑1 (MQ=255)
tttCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGtg > 2:417250/1‑93 (MQ=255)
tCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGtgct < 1:3815800/93‑1 (MQ=255)
tCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGtgct > 2:3439931/1‑93 (MQ=255)
cacaAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGAGCGtgctgc > 1:6421676/1‑93 (MQ=255)
aaCTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCAc > 1:4399029/1‑93 (MQ=255)
aaCTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCAc > 2:1951382/1‑93 (MQ=255)
aCTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCAcc > 2:2425171/1‑93 (MQ=255)
cccTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACcgcg > 2:4956004/1‑93 (MQ=255)
cTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCgca > 1:5729640/1‑93 (MQ=255)
cTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCCCgca > 1:722078/1‑93 (MQ=255)
aaCGGCGTGGTGAGCGAGTCAGGCAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCgcagc > 1:2213295/1‑93 (MQ=255)
aCGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCgcagcc > 2:5907121/1‑92 (MQ=255)
cGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCAc < 2:669062/93‑1 (MQ=255)
ggCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCAcc > 2:5596285/1‑93 (MQ=255)
gCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCa > 1:3100389/1‑93 (MQ=255)
gCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCa > 2:256060/1‑93 (MQ=255)
gCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCCCGCAGCACCa > 1:1572326/1‑93 (MQ=255)
gCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGAGCACCGCGCAGCACCa > 2:2292379/1‑93 (MQ=255)
gtggtgAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGt > 1:4974825/1‑93 (MQ=255)
tggtgAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGtt < 1:5353297/93‑1 (MQ=255)
gggtgAGCGAGGCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGtt < 1:1429666/92‑1 (MQ=255)
ggtgAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTg > 1:3508792/1‑93 (MQ=255)
gAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTaa < 2:3041442/93‑1 (MQ=255)
gCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACg > 2:1064692/1‑93 (MQ=255)
cGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACgg < 1:1243301/93‑1 (MQ=255)
gAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGc < 2:1812784/93‑1 (MQ=255)
aGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCg > 1:571250/1‑93 (MQ=255)
gTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGt > 2:6674504/1‑93 (MQ=255)
gTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGt < 1:3661649/93‑1 (MQ=255)
gTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGt > 1:1109427/1‑93 (MQ=255)
gTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGt < 1:4092072/93‑1 (MQ=255)
cAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGtct < 1:2683302/93‑1 (MQ=255)
aGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGtctc > 2:113500/1‑93 (MQ=255)
ggTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTctcc > 1:2487073/1‑93 (MQ=255)
gTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTctcct > 1:1010487/1‑93 (MQ=255)
tAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTttcctc > 1:249081/1‑93 (MQ=255)
tAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTctcctc > 2:3973467/1‑93 (MQ=255)
aaTGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCtcctcc > 2:1197108/1‑93 (MQ=255)
aTGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCg > 2:2691977/1‑93 (MQ=255)
gCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCa > 1:6284307/1‑93 (MQ=255)
tGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAg > 1:3787622/1‑93 (MQ=255)
tGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAg > 2:595062/1‑93 (MQ=255)
gaCTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAgtgt < 2:6468636/93‑1 (MQ=255)
gaCTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAgtgt < 2:4878745/93‑1 (MQ=255)
gaCTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAgtgt < 2:6608957/93‑1 (MQ=255)
gaCTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAgtgt < 1:919083/93‑1 (MQ=255)
aCTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGTGtt < 2:604574/93‑1 (MQ=255)
aCTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGTGtt < 1:405049/93‑1 (MQ=255)
cTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGTGTTg < 1:5502376/93‑1 (MQ=255)
cTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGTGTTg < 2:2649815/93‑1 (MQ=255)
cTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGTGTTg < 1:5657469/93‑1 (MQ=255)
tttGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGTGTTgg < 2:6074739/93‑1 (MQ=255)
tttGGTCGCCCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGTGTTgg < 2:6340851/93‑1 (MQ=255)
ttGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGTGTTGGc > 1:291544/1‑93 (MQ=255)
ggTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGTGTTGGCag < 1:1703665/93‑1 (MQ=255)
ggTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGTGTTGGCag > 1:1558124/1‑93 (MQ=255)
gTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGTGTTGGCaga > 1:5386107/1‑93 (MQ=255)
gTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGTGTTGGCaga < 2:2946099/93‑1 (MQ=255)
|
GGGTATCCTCCAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCACGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGTGTTGGCAGA > NC_000913/2327598‑2327776
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGATGGGTATCCTCCAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCACGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGTGTTGGCAGAGTAA > NC_000913/2327594‑2327780
|
TGATGGTTATCCTCCAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCG < SRR4302536.5875073/94‑1 (MQ=60)
ATGGGTATCCTCCAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCG < SRR4302536.189512/94‑1 (MQ=60)
GGTATCCTCCAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCT < SRR4302536.2885765/94‑1 (MQ=60)
GGTATCCTCCAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCT < SRR4302536.5885050/94‑1 (MQ=60)
GTATCCTCCAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTG < SRR4302536.620082/94‑1 (MQ=60)
TATCCTCCAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGA < SRR4302536.773280/94‑1 (MQ=60)
TATCCTCCAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGA < SRR4302536.6146018/94‑1 (MQ=60)
ATCCTCCAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGAT < SRR4302536.5291615/94‑1 (MQ=60)
ATCCTCCAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGAT > SRR4302536.2418599/1‑94 (MQ=60)
TCCTCCAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATG > SRR4302536.4769529/1‑94 (MQ=60)
TCCTCCAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATG < SRR4302536.6303899/94‑1 (MQ=60)
CCTCCAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGA > SRR4302536.6462615/1‑94 (MQ=60)
CCTCCAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGA < SRR4302536.4602941/94‑1 (MQ=60)
CTCCAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGAC < SRR4302536.1881610/94‑1 (MQ=60)
TCCAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACG < SRR4302536.3121268/94‑1 (MQ=60)
CCAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGA > SRR4302536.6107652/1‑94 (MQ=60)
CAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGAC > SRR4302536.3714746/1‑94 (MQ=60)
CAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGAC > SRR4302536.3780445/1‑94 (MQ=60)
AGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACA > SRR4302536.2743922/1‑94 (MQ=60)
AGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACA > SRR4302536.1897272/1‑94 (MQ=60)
AGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACA < SRR4302536.4171750/94‑1 (MQ=60)
CCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTCTGGTCGCGCCTGATGACGACAGC > SRR4302536.6282870/1‑94 (MQ=60)
CAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCT > SRR4302536.5649580/1‑94 (MQ=60)
AGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTG > SRR4302536.1018107/1‑94 (MQ=60)
GCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGAT > SRR4302536.5953136/1‑94 (MQ=60)
CGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATA < SRR4302536.5151361/94‑1 (MQ=60)
GTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATAC < SRR4302536.2686191/94‑1 (MQ=60)
TAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCCGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACA > SRR4302536.3491670/1‑94 (MQ=60)
AAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGCCGACAGCTGATACAT > SRR4302536.2637062/1‑94 (MQ=60)
AAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAG > SRR4302536.5630752/1‑94 (MQ=60)
ACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTT < SRR4302536.2053300/94‑1 (MQ=60)
CATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTG > SRR4302536.3455960/1‑94 (MQ=60)
ATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGA < SRR4302536.4251488/94‑1 (MQ=60)
ATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGA > SRR4302536.1332515/1‑94 (MQ=60)
ATACAGGTTCCACAACCTCCCTAACGGCGAGGTGAGAGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGAAGACTGCTGATACAGTTGA > SRR4302536.1783239/1‑94 (MQ=60)
TACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGAT > SRR4302536.2462089/1‑94 (MQ=60)
TACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGAT < SRR4302536.3702056/94‑1 (MQ=60)
CAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCG > SRR4302536.5570361/1‑94 (MQ=60)
AGTCTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGT < SRR4302536.999377/94‑1 (MQ=60)
TCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTG < SRR4302536.3929515/94‑1 (MQ=60)
CCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGAGCGTGCTGC > SRR4302536.6613605/1‑94 (MQ=60)
CACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCG < SRR4302536.1476981/94‑1 (MQ=60)
CACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCG > SRR4302536.1608918/1‑94 (MQ=60)
CAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCA > SRR4302536.2307251/1‑94 (MQ=60)
CAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCA > SRR4302536.5521250/1‑94 (MQ=60)
AAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCAC > SRR4302536.4530502/1‑94 (MQ=60)
AAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCAC > SRR4302536.3982173/1‑94 (MQ=60)
ACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCG > SRR4302536.3761282/1‑94 (MQ=60)
CTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCaggcttgcgccccg > SRR4302536.1397420/1‑80 (MQ=60)
TCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCCCG > SRR4302536.255650/1‑94 (MQ=60)
CCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCA > SRR4302536.6631518/1‑94 (MQ=60)
CCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCA > SRR4302536.5900053/1‑94 (MQ=60)
CCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCA > SRR4302536.3913529/1‑94 (MQ=60)
CCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCA > SRR4302536.4585720/1‑94 (MQ=60)
CCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCCCGCA > SRR4302536.743209/1‑94 (MQ=60)
TAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGC > SRR4302536.1708779/1‑94 (MQ=60)
TAACGGCGTGGTGAGCGAGTCAGGCAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGC > SRR4302536.2280145/1‑94 (MQ=60)
GGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCA > SRR4302536.3190911/1‑94 (MQ=60)
GGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCCCGCAGCACCA > SRR4302536.1618429/1‑94 (MQ=60)
CGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGT > SRR4302536.5124243/1‑94 (MQ=60)
TGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTG > SRR4302536.3613533/1‑94 (MQ=60)
TGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTG > SRR4302536.4622502/1‑94 (MQ=60)
TGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTG < SRR4302536.5513078/94‑1 (MQ=60)
GGGTGAGCGAGGCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTG < SRR4302536.1472124/94‑1 (MQ=60)
GTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTA < SRR4302536.1853544/94‑1 (MQ=60)
TGAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAA < SRR4302536.1164613/94‑1 (MQ=60)
GAGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAAC > SRR4302536.3462602/1‑94 (MQ=60)
AGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACG > SRR4302536.4272320/1‑94 (MQ=60)
AGCGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACG < SRR4302536.6465759/94‑1 (MQ=60)
CGAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGC < SRR4302536.1280634/94‑1 (MQ=60)
GAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCG < SRR4302536.6560991/94‑1 (MQ=60)
GAGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCG > SRR4302536.585776/1‑94 (MQ=60)
AGTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGT > SRR4302536.1142713/1‑94 (MQ=60)
GTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTC < SRR4302536.4213405/94‑1 (MQ=60)
GTCAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTC < SRR4302536.3771113/94‑1 (MQ=60)
CAGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTC < SRR4302536.2763469/94‑1 (MQ=60)
AGGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCC > SRR4302536.2562103/1‑94 (MQ=60)
GGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCT < SRR4302536.3564441/94‑1 (MQ=60)
GGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCT > SRR4302536.1040298/1‑94 (MQ=60)
GGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCT < SRR4302536.5741442/94‑1 (MQ=60)
GGTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCT < SRR4302536.5721982/94‑1 (MQ=60)
GTAATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTTTCCTC > SRR4302536.255736/1‑94 (MQ=60)
AATGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAACATCAGTTGTAACGGCGTCTCGTCCG > SRR4302536.1082211/1‑94 (MQ=60)
TGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCA > SRR4302536.6471591/1‑94 (MQ=60)
TGCTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCA > SRR4302536.5423004/1‑94 (MQ=60)
CTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAG > SRR4302536.5858768/1‑94 (MQ=60)
CTGAGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAG > SRR4302536.3900628/1‑94 (MQ=60)
TGAGACTTTGGTCGCGCTTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGT < SRR4302536.4884156/94‑1 (MQ=60)
AGACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGTGT > SRR4302536.2110992/1‑94 (MQ=60)
GACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGTGTT < SRR4302536.946174/94‑1 (MQ=60)
ACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGTGTTG < SRR4302536.415737/94‑1 (MQ=60)
ACTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGGGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGTGGTG > SRR4302536.6144664/1‑94 (MQ=60)
CTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGTGTTGG < SRR4302536.5666535/94‑1 (MQ=60)
CTTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGTGTTGG < SRR4302536.5825614/94‑1 (MQ=60)
TTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCGCCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGGGTTGGC < SRR4302536.4015859/94‑1 (MQ=60)
TTTGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGTGTTGGC > SRR4302536.299300/1‑94 (MQ=60)
TGGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGTGTTGGCAG > SRR4302536.1603880/1‑94 (MQ=60)
GGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGTGTTGGCAGA > SRR4302536.5546862/1‑94 (MQ=60)
GGTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGTGTTGGCAGA < SRR4302536.1752956/94‑1 (MQ=60)
GTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGTGTTGGCAGAG < SRR4302536.2137416/94‑1 (MQ=60)
GTCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGTGTTGGCAGAG < SRR4302536.6571144/94‑1 (MQ=60)
TCGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGTGTTGGCAGAGT < SRR4302536.1395531/94‑1 (MQ=60)
CGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGTGTTGGCAGAGTA < SRR4302536.3553132/94‑1 (MQ=60)
CGCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGAGTCTCCTCCGCAAGTGTTGGCAGCGTA > SRR4302536.5824387/1‑94 (MQ=60)
GCGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGTGTTGGGAGAGTAA > SRR4302536.4772820/1‑94 (MQ=60)
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TGATGGGTATCCTCCAGCCAGGCGTAAACATACAGTTTCCACAAACTCCCTAACGGCGTGGTGAGCGAGTCAGGTAATGCTGAGACTTTGGTCACGCCTGATGACGACAGCTGATACAGTTGATCGTGCTGCGCACCGCGCAGCACCAGTTGTAACGGCGTCTCCTCCGCAAGTGTTGGCAGAGTAA > NC_000913/2327594‑2327780
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
