Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,409,290 |
G→A |
A28V (GCG→GTG) |
yfbS ← |
putative transport protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,409,290 | 0 | G | A | 100.0%
| 797.5
/ NA
| 217 | A28V (GCG→GTG) | yfbS | putative transport protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (125/92); total (125/92) |
Only 100 of 234 total aligned reads displayed.
ACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCGCATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTATCC > NC_000913/2409200‑2409381
|
aCAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACcaca < 2:4231916/93‑1 (MQ=255)
aaCGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATc > 1:3046667/1‑93 (MQ=255)
aCGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGTAAACGCGACAATAACAAACAAAGCGACCACATcc > 1:4366760/1‑93 (MQ=255)
aCGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATcc > 1:4848253/1‑93 (MQ=255)
aCGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATcc > 1:254456/1‑93 (MQ=255)
aCGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATcc > 1:5902346/1‑93 (MQ=255)
cGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCa < 1:6266202/93‑1 (MQ=255)
tAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATAc < 2:4888567/93‑1 (MQ=255)
aGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACg > 2:4330748/1‑93 (MQ=255)
ggATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGc > 1:37771/1‑93 (MQ=255)
gATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCa > 2:1219376/1‑93 (MQ=255)
aTCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCAc > 1:1016648/1‑93 (MQ=255)
tCAGAAAAGCCGTAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCAct < 1:5465567/93‑1 (MQ=255)
gAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTg > 1:1656481/1‑93 (MQ=255)
gAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTg > 2:2202969/1‑93 (MQ=255)
gAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTg > 2:3089285/1‑93 (MQ=255)
gAAAAGCCGGAAAATACTTCAGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAATAAAGCGACCACATCCATACGTACTCTg > 2:5131165/1‑93 (MQ=255)
aaaaGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGc > 1:2426157/1‑93 (MQ=255)
aaaGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGcc > 1:938043/1‑93 (MQ=255)
aaaGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGcc > 2:6009061/1‑93 (MQ=255)
aaGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGccc > 1:3743632/1‑93 (MQ=255)
aGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCg > 1:1962860/1‑93 (MQ=255)
gCCGGACAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGt < 2:171304/93‑1 (MQ=255)
gCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGt > 2:4651134/1‑93 (MQ=255)
gCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGt < 1:693100/93‑1 (MQ=255)
gCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGt < 2:3541566/93‑1 (MQ=255)
ggAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGc > 2:2513810/1‑93 (MQ=255)
aaTACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAAc < 2:544337/93‑1 (MQ=255)
tACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACaa < 1:2197831/93‑1 (MQ=255)
tACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACaa < 2:3234355/93‑1 (MQ=255)
cTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGa < 1:5238992/93‑1 (MQ=255)
ttCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGAc > 1:4818344/1‑93 (MQ=255)
ttCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGAc > 1:4261855/1‑93 (MQ=255)
tGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGAt > 2:2180218/1‑93 (MQ=255)
ggACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCCCTCTGCCCGTCGCAAACAAGACGATgg < 2:6082563/93‑1 (MQ=255)
gACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGc < 2:6463203/93‑1 (MQ=255)
gACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGc < 1:2890400/93‑1 (MQ=255)
cTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCaa < 2:3899282/93‑1 (MQ=255)
cTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCaa > 2:4812086/1‑93 (MQ=255)
cTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCaa < 1:6053770/93‑1 (MQ=255)
tGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAAc > 1:2298001/1‑93 (MQ=255)
gTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACg > 1:4397155/1‑93 (MQ=255)
gTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACg < 2:3970723/93‑1 (MQ=255)
tCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACgg > 1:3834580/1‑93 (MQ=255)
tCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACgg > 1:1518757/1‑93 (MQ=255)
cAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGc < 2:5715939/93‑1 (MQ=255)
cGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAg < 1:3661745/93‑1 (MQ=255)
ccGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAAt < 1:639257/93‑1 (MQ=255)
gCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGa > 1:4065160/1‑93 (MQ=255)
gCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGa > 1:2376407/1‑93 (MQ=255)
cTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGaa > 1:3891279/1‑93 (MQ=255)
ttAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGaaa > 2:1760153/1‑93 (MQ=255)
ttAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGaaa < 1:125573/93‑1 (MQ=255)
tAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAg < 1:3465493/93‑1 (MQ=255)
tAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAg > 2:3724710/1‑93 (MQ=255)
tAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAg > 1:277053/1‑93 (MQ=255)
aaTGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGa < 1:989464/93‑1 (MQ=255)
aaTGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGa > 2:6500497/1‑93 (MQ=255)
aaTGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGa < 2:4390867/93‑1 (MQ=255)
aTGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGaa > 1:796307/1‑93 (MQ=255)
tGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAAc > 2:4974788/1‑93 (MQ=255)
cAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAAccc > 1:2103968/1‑93 (MQ=255)
aaaCGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCa > 2:2623616/1‑93 (MQ=255)
accgcgACAATAACAAACAAAGCGCCCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCaa < 1:1589995/91‑1 (MQ=255)
aaCGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCaa > 1:2489320/1‑93 (MQ=255)
atgcgACAATAACAAACAAAGCGCCCACATCCATACGCGCTCTGCCCGTCGAAAACAAGGCGATGGCAACGGCCAGTAATGAAAGAACCCaaa < 1:4194551/91‑1 (MQ=255)
gcgACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATc < 1:4320721/93‑1 (MQ=255)
gcaaCAATAACAAACAACGCGACCACATCCACACGCACTCTCCCCGTCGCAAACAAGCCGATGGCAACGGCCAGTAATGAAAGAACCCAAATc < 1:4675625/90‑1 (MQ=255)
ccgACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATc < 1:3262904/92‑1 (MQ=255)
gACAATAACAAACAAAGCGACCACGTCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCaa > 2:3626976/1‑93 (MQ=255)
gACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCaa < 2:6388885/93‑1 (MQ=255)
aCAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAAt < 1:4475641/93‑1 (MQ=255)
aCAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAAt < 2:5779952/93‑1 (MQ=255)
cAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAAtt > 1:578702/1‑93 (MQ=255)
aaTAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTc > 2:555446/1‑93 (MQ=255)
aaTAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTc < 1:3812633/93‑1 (MQ=255)
aaTAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTc < 1:4969430/93‑1 (MQ=255)
aTAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCa < 2:2486366/93‑1 (MQ=255)
tAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCAc < 1:1386875/93‑1 (MQ=255)
aacaaacaAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCAcc > 2:863567/1‑93 (MQ=255)
aacaaacaAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCAcc > 2:460643/1‑93 (MQ=255)
aacaaacaAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCAcc < 2:2820339/93‑1 (MQ=255)
aacaaacaAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCAcc > 2:2228551/1‑93 (MQ=255)
aacaaacaAAGCGACCACATCCATACACACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCAcc < 2:6140615/93‑1 (MQ=255)
acaaacaaAGCGACCACATCCATCCGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCTATTCACCg < 1:6548925/93‑1 (MQ=255)
aaacaaaGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGtt > 1:904121/1‑93 (MQ=255)
aaacaaaGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGtt < 2:3785959/93‑1 (MQ=255)
aaacaaaGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGtt > 2:2722679/1‑93 (MQ=255)
aacaaaGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTc < 2:3437457/93‑1 (MQ=255)
aacaaaGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTc > 1:2725636/1‑93 (MQ=255)
caaaGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTcac > 2:293217/1‑93 (MQ=255)
aaGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACaa > 2:673394/1‑93 (MQ=255)
aaGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACaa > 2:1572822/1‑93 (MQ=255)
aGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAAc > 1:2164131/1‑93 (MQ=255)
aGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAAc < 1:5847158/93‑1 (MQ=255)
aGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAAc < 1:4309004/93‑1 (MQ=255)
aGCAACCACATCCATCCGCCCTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAAc < 1:6200508/93‑1 (MQ=255)
gACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTa < 1:5367196/93‑1 (MQ=255)
aCCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTAt > 2:4600634/1‑93 (MQ=255)
cGCATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGAAACGGCCAGTAATGAAAGAACCCAAATCAATTCTCCGTTCACAACTTATcc < 2:52473/93‑1 (MQ=255)
|
ACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCGCATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTATCC > NC_000913/2409200‑2409381
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCGCATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTATCC > NC_000913/2409197‑2409381
|
AGGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCA > SRR4302536.523437/1‑94 (MQ=60)
AGGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCA > SRR4302536.72513/1‑94 (MQ=60)
GGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCAC < SRR4302536.2468501/94‑1 (MQ=60)
GGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCAC > SRR4302536.2426984/1‑94 (MQ=60)
GACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACA > SRR4302536.2252405/1‑94 (MQ=60)
ACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACAT > SRR4302536.4263604/1‑94 (MQ=60)
CAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATC > SRR4302536.3136185/1‑94 (MQ=60)
AACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGTAAACGCGACAATAACAAACAAAGCGACCACATCC > SRR4302536.4497239/1‑94 (MQ=60)
AACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCC > SRR4302536.4994150/1‑94 (MQ=60)
AACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCC > SRR4302536.4807966/1‑94 (MQ=60)
AACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCC > SRR4302536.6078118/1‑94 (MQ=60)
AACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCC > SRR4302536.261253/1‑94 (MQ=60)
CGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCAT < SRR4302536.6452884/94‑1 (MQ=60)
TTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATAC < SRR4302536.2279613/94‑1 (MQ=60)
TTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATAC < SRR4302536.4324443/94‑1 (MQ=60)
TTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATAC < SRR4302536.1249881/94‑1 (MQ=60)
TTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATAC < SRR4302536.3918910/94‑1 (MQ=60)
TAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACG > SRR4302536.2490876/1‑94 (MQ=60)
TAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACG < SRR4302536.613722/94‑1 (MQ=60)
AGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGC > SRR4302536.38829/1‑94 (MQ=60)
AGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGC > SRR4302536.916140/1‑94 (MQ=60)
GATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCAC > SRR4302536.1046706/1‑94 (MQ=60)
ATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATACCACACAAAGCGACCACATCCATACGCACT > SRR4302536.5987402/1‑94 (MQ=60)
ATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACT < SRR4302536.4559673/94‑1 (MQ=60)
TCAGAAAAGCCGTAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTC < SRR4302536.5628904/94‑1 (MQ=60)
CAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCT < SRR4302536.145490/94‑1 (MQ=60)
CAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCT > SRR4302536.4973118/1‑94 (MQ=60)
CAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCAACCACATCCAGACGCACTCT < SRR4302536.6700809/94‑1 (MQ=60)
AGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTG > SRR4302536.4899424/1‑94 (MQ=60)
AGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTG > SRR4302536.4449448/1‑94 (MQ=60)
AGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTG > SRR4302536.1704597/1‑94 (MQ=60)
AGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTG > SRR4302536.3178855/1‑94 (MQ=60)
AGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTG < SRR4302536.2518817/94‑1 (MQ=60)
GACAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATACATACGCACTCTGC > SRR4302536.798262/1‑94 (MQ=60)
GAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGC > SRR4302536.2499509/1‑94 (MQ=60)
AAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCC > SRR4302536.2729601/1‑94 (MQ=60)
AAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCC > SRR4302536.965697/1‑94 (MQ=60)
AAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCC > SRR4302536.3855550/1‑94 (MQ=60)
AAGCCGGAAAATACTTCTTGGACTGTCAGCGTTCCGCTTAATTCAAACGCGACAATAACAAACAAAGCGACCACATCGATACGCGCTCTGCGCG > SRR4302536.2145092/1‑94 (MQ=60)
AAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCG > SRR4302536.2021874/1‑94 (MQ=60)
AAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCG > SRR4302536.5173385/1‑94 (MQ=60)
AAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCG < SRR4302536.1959993/94‑1 (MQ=60)
AGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGT < SRR4302536.2214501/94‑1 (MQ=60)
GCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTC < SRR4302536.713346/94‑1 (MQ=60)
CCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCC > SRR4302536.2058736/1‑94 (MQ=60)
CGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGC > SRR4302536.6580618/1‑94 (MQ=60)
GGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCA > SRR4302536.3516387/1‑94 (MQ=60)
GAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACTATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAA < SRR4302536.5776656/94‑1 (MQ=60)
AAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAA < SRR4302536.6095519/94‑1 (MQ=60)
AAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAA > SRR4302536.4010223/1‑94 (MQ=60)
AATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACA > SRR4302536.3095246/1‑94 (MQ=60)
ATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAA < SRR4302536.4516642/94‑1 (MQ=60)
ATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAA > SRR4302536.642062/1‑94 (MQ=60)
TACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAG < SRR4302536.2264180/94‑1 (MQ=60)
CTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGAC > SRR4302536.4388867/1‑94 (MQ=60)
CTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGAC > SRR4302536.4963345/1‑94 (MQ=60)
CTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGAC < SRR4302536.5395089/94‑1 (MQ=60)
CTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGAC > SRR4302536.497905/1‑94 (MQ=60)
TTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACG < SRR4302536.1921961/94‑1 (MQ=60)
TTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACG > SRR4302536.307044/1‑94 (MQ=60)
CTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGAT > SRR4302536.6828469/1‑94 (MQ=60)
GGGACTGTCAGCGCTCCGCTTAATGCAAAGCCGAAAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGG < SRR4302536.2492157/94‑1 (MQ=60)
GGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGC < SRR4302536.6920091/94‑1 (MQ=60)
GACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCA < SRR4302536.2975648/94‑1 (MQ=60)
CTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAAC < SRR4302536.6234358/94‑1 (MQ=60)
CTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAAC > SRR4302536.2367733/1‑94 (MQ=60)
CTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAAC < SRR4302536.3985439/94‑1 (MQ=60)
TGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACG > SRR4302536.4528539/1‑94 (MQ=60)
TGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACG > SRR4302536.4859416/1‑94 (MQ=60)
GTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGG > SRR4302536.3762536/1‑94 (MQ=60)
GTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGG > SRR4302536.1563459/1‑94 (MQ=60)
GTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGG > SRR4302536.3948770/1‑94 (MQ=60)
CGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGT < SRR4302536.3771214/94‑1 (MQ=60)
CGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGT > SRR4302536.3917633/1‑94 (MQ=60)
CGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGT > SRR4302536.5356914/1‑94 (MQ=60)
CGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGT > SRR4302536.1016712/1‑94 (MQ=60)
GTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTA > SRR4302536.4431878/1‑94 (MQ=60)
GTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTA > SRR4302536.1610041/1‑94 (MQ=60)
CCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATG < SRR4302536.658124/94‑1 (MQ=60)
CGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGA > SRR4302536.3943856/1‑94 (MQ=60)
CGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGA > SRR4302536.2448400/1‑94 (MQ=60)
CGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGA > SRR4302536.4185648/1‑94 (MQ=60)
GCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAA > SRR4302536.4006984/1‑94 (MQ=60)
GCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAA < SRR4302536.2837770/94‑1 (MQ=60)
CTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAA > SRR4302536.567503/1‑94 (MQ=60)
CTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAA > SRR4302536.1349241/1‑94 (MQ=60)
TTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAG > SRR4302536.284419/1‑94 (MQ=60)
TTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAG < SRR4302536.128886/94‑1 (MQ=60)
TTAATGCAAACACGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAG < SRR4302536.933843/94‑1 (MQ=60)
TAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGA < SRR4302536.3568771/94‑1 (MQ=60)
AATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAA < SRR4302536.1018655/94‑1 (MQ=60)
AATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAA > SRR4302536.819636/1‑94 (MQ=60)
AATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAA > SRR4302536.4068238/1‑94 (MQ=60)
GCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCC > SRR4302536.2167215/1‑94 (MQ=60)
CAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCA < SRR4302536.3786293/94‑1 (MQ=60)
AAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAA > SRR4302536.2564420/1‑94 (MQ=60)
ACCGCGACAATAACAAACAAAGCGCCCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAA < SRR4302536.1636501/94‑1 (MQ=60)
ATGCGACAATAACAAACAAAGCGCCCACATCCATACGCGCTCTGCCCGTCGAAAACAAGGCGATGGCAACGGCCAGTAATGAAAGAACCCAAAT < SRR4302536.4319211/94‑1 (MQ=60)
ACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAAT < SRR4302536.1665147/94‑1 (MQ=60)
GCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCA < SRR4302536.4450089/94‑1 (MQ=60)
GCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCA < SRR4302536.2595961/94‑1 (MQ=60)
GCAACAATAACAAACAACGCGACCACATCCACACGCACTCTCCCCGTCGCAAACAAGCCGATGGCAACGGCCAGTAATGAAAGAACCCAAATCA < SRR4302536.4816233/94‑1 (MQ=60)
CCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCA < SRR4302536.3358628/94‑1 (MQ=60)
ACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATT < SRR4302536.4610094/94‑1 (MQ=60)
ACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATT > SRR4302536.593387/1‑94 (MQ=60)
CAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTC > SRR4302536.942252/1‑94 (MQ=60)
AATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCA < SRR4302536.3926291/94‑1 (MQ=60)
AATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCA < SRR4302536.5118707/94‑1 (MQ=60)
ATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCAC < SRR4302536.2765211/94‑1 (MQ=60)
TAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACC < SRR4302536.1428176/94‑1 (MQ=60)
AAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACC < SRR4302536.3741062/94‑1 (MQ=60)
AACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCG > SRR4302536.6030810/1‑94 (MQ=60)
ACAAACAAAGCGACCACATCCATCCGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCTATTCACCGT < SRR4302536.6743938/94‑1 (MQ=60)
CAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTT > SRR4302536.930764/1‑94 (MQ=60)
CAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTT > SRR4302536.6541034/1‑94 (MQ=60)
AAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTC > SRR4302536.2806904/1‑94 (MQ=60)
AAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTC > SRR4302536.544632/1‑94 (MQ=60)
AACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCA < SRR4302536.6248735/94‑1 (MQ=60)
CAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACA < SRR4302536.4493555/94‑1 (MQ=60)
AAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAATGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAA > SRR4302536.5548321/1‑94 (MQ=60)
AAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAAC > SRR4302536.4501342/1‑94 (MQ=60)
AAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAAC > SRR4302536.2229230/1‑94 (MQ=60)
AAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAAC > SRR4302536.3877465/1‑94 (MQ=60)
AGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACT < SRR4302536.6021368/94‑1 (MQ=60)
AGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACT < SRR4302536.4437927/94‑1 (MQ=60)
AGCAACCACATCCATCCGCCCTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACT < SRR4302536.6385186/94‑1 (MQ=60)
GCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTT > SRR4302536.1499835/1‑94 (MQ=60)
GCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTT < SRR4302536.2433274/94‑1 (MQ=60)
CGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTA > SRR4302536.2231249/1‑94 (MQ=60)
CGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTA > SRR4302536.4414240/1‑94 (MQ=60)
GACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTAT < SRR4302536.5527255/94‑1 (MQ=60)
ACCACATCCATACTCACTCTGCCCGTGGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCTCCGTTCACAACTTATC < SRR4302536.2856151/94‑1 (MQ=60)
CCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTATCC < SRR4302536.2072786/94‑1 (MQ=60)
|
AGGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCGCATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTATCC > NC_000913/2409197‑2409381
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
