Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,413,512 |
T→C |
I249T (ATC→ACC) |
pta → |
phosphotransacetylase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,413,512 | 0 | T | C | 100.0%
| 704.5
/ NA
| 214 | I249T (ATC→ACC) | pta | phosphotransacetylase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (90/124); total (90/124) |
Only 100 of 240 total aligned reads displayed.
GCGCTGTGCCGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACATCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTCTGCTGGTGA > NC_000913/2413422‑2413601
|
gcgcTGTGCCGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCTACGCAGGCGGCACCa > 2:5771924/1‑93 (MQ=255)
gcgcTGTGCCGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCa < 1:3051030/93‑1 (MQ=255)
cgcTGTGCCGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCaa < 2:3290972/93‑1 (MQ=255)
cgcTGTGCCGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCaa < 1:3014905/93‑1 (MQ=255)
cTGTGCCGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATa < 1:1739456/93‑1 (MQ=255)
tgtgCCGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATAc < 2:2978430/93‑1 (MQ=255)
gtgCCGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACt < 1:5796781/93‑1 (MQ=255)
tgCCGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTc < 1:6378023/93‑1 (MQ=255)
gCCGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCACCATCAACGAAAGCGTCACCAAAACTcg > 1:3425935/1‑93 (MQ=255)
gCCGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCCCCACCTGAATGCGACCATCATCAAAGAAAGCGACACCAATACTcg > 1:249814/1‑93 (MQ=255)
ggAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCcgcg > 1:1415150/1‑93 (MQ=255)
aGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGtt < 1:2807485/93‑1 (MQ=255)
gCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTa > 2:3067420/1‑93 (MQ=255)
cTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACAAAGGCGACACCAACACTCCCCGCGGTaa > 2:6235628/1‑93 (MQ=255)
tttGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTaaa < 2:1586921/93‑1 (MQ=255)
tttGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTaaa < 2:4790374/93‑1 (MQ=255)
tttGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTaaa > 2:2609544/1‑93 (MQ=255)
tttGACCTGATCGCGACTCGTGCGATCGATATGGCTCCCCGGCCGAAAGCGGGCATCATCAACGAAGGCGCCACCAAGACTCGCCGCGCTaaa > 2:2104351/1‑93 (MQ=255)
tGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATc < 2:1891331/93‑1 (MQ=255)
gACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGGGACACACACACTCGCCCCCTTAAATcc > 2:168091/1‑93 (MQ=255)
gACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATcc < 2:5456686/93‑1 (MQ=255)
cTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTc > 1:2881679/1‑93 (MQ=255)
cTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTc < 2:3646591/93‑1 (MQ=255)
gATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCAc < 1:6457121/93‑1 (MQ=255)
aTCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCCTCAACGAAGGCGACACCCATACTCGCCGCGTTAAATCCGTCACt > 2:533011/1‑93 (MQ=255)
gcgACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTc < 2:6673752/93‑1 (MQ=255)
cgACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCt < 2:3420223/93‑1 (MQ=255)
gACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTg < 2:6091873/93‑1 (MQ=255)
gACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTg > 1:1386152/1‑93 (MQ=255)
gcTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTgc < 1:4441136/92‑1 (MQ=255)
aCTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAAAGAAGGCGACACCAATACTCGCCGCCGTAAATCCGTCACTTTCTgc > 1:6563112/1‑93 (MQ=255)
aCTCGTGCGATCGATATGGCTCGCCACCCGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTgc > 1:5565668/1‑93 (MQ=255)
cTCGTGCGATCGATATGGCTCCCCACCTGAATGCGACCATCATCAACGAAGGCGACCCCAATACTCGCCCCGTTACATCAGTCACCTTCtttc > 2:5012404/1‑90 (MQ=255)
tCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTgcgc < 2:3277164/93‑1 (MQ=255)
tCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCCCGTTAAATCCGTCACTTTCTgcgc > 2:57857/1‑93 (MQ=255)
tGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTTTGcgcacg > 2:2003523/1‑93 (MQ=255)
tGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAAGCGACACCAATAATCGCCGCGTTAAATCCGTCACTTTATGcgcacg > 1:5411309/1‑93 (MQ=255)
cgatcgatATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGcgcccgca > 1:6130192/1‑93 (MQ=255)
cgatcgatATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGcgcacgca < 2:85298/93‑1 (MQ=255)
gatcgatATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACgcag > 2:45476/1‑93 (MQ=255)
gatcgatATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACgcag > 1:5947819/1‑93 (MQ=255)
tcgatATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACgcagca < 2:3377334/93‑1 (MQ=255)
cgatATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCAt < 1:5250204/93‑1 (MQ=255)
atatGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTc > 1:6631160/1‑93 (MQ=255)
atatGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTCCGCACGCAGCATTc < 1:5690291/93‑1 (MQ=255)
tatGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTcc < 2:1102558/93‑1 (MQ=255)
tGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGc < 1:3081820/93‑1 (MQ=255)
ggCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGca > 1:6084750/1‑93 (MQ=255)
gCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGcac < 1:4104419/93‑1 (MQ=255)
tCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACAt > 1:1247614/1‑93 (MQ=255)
ccGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACAt < 1:462844/92‑1 (MQ=255)
cGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATg < 2:3951036/93‑1 (MQ=255)
gCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGc > 1:628464/1‑93 (MQ=255)
gCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGc > 2:4416148/1‑93 (MQ=255)
ccACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCt < 1:2702654/93‑1 (MQ=255)
ccACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCt < 2:714811/93‑1 (MQ=255)
cACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTg > 1:1892456/1‑93 (MQ=255)
cACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTg > 1:1523190/1‑93 (MQ=255)
cACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTg < 1:668055/93‑1 (MQ=255)
aCCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTgg > 2:6639679/1‑93 (MQ=255)
aCCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTgg > 1:2612479/1‑93 (MQ=255)
aCCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTgg > 1:3862453/1‑93 (MQ=255)
ccTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGa < 1:3567860/93‑1 (MQ=255)
ccTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGa > 2:5531278/1‑93 (MQ=255)
cTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAg > 2:2833585/1‑93 (MQ=255)
cTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAg < 1:3647273/93‑1 (MQ=255)
gAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCa < 2:1177960/93‑1 (MQ=255)
gAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCa < 2:1506835/93‑1 (MQ=255)
aaTGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCAc < 2:5254816/93‑1 (MQ=255)
aaTGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCAc < 2:4223965/93‑1 (MQ=255)
aTGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACt < 1:5838275/93‑1 (MQ=255)
aTGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACt < 1:4693354/93‑1 (MQ=255)
tGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACtt > 1:4198592/1‑93 (MQ=255)
tGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACtt < 1:3481625/93‑1 (MQ=255)
cGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTcc > 2:2389977/1‑93 (MQ=255)
cGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTcc < 2:4059899/93‑1 (MQ=255)
aCCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGGACGCAGCATTCCGCACATGCTGGAGCACTTCCGt > 1:1258961/1‑93 (MQ=255)
aCCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGt > 1:454661/1‑93 (MQ=255)
ccATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTg > 2:6037359/1‑93 (MQ=255)
ccATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTg < 1:1581325/93‑1 (MQ=255)
atcatcAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGcc < 1:4937413/93‑1 (MQ=255)
atcatcAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGcc < 2:4337233/93‑1 (MQ=255)
atcatcAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGcc > 2:795207/1‑93 (MQ=255)
atcatcAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGcc < 2:2544866/93‑1 (MQ=255)
catcaACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCgg > 1:1036874/1‑93 (MQ=255)
tcaACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGtt > 1:5729543/1‑93 (MQ=255)
tcaACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGtt < 2:263588/93‑1 (MQ=255)
aaCGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTtct > 1:6153883/1‑93 (MQ=255)
aaCGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTtct > 1:797506/1‑93 (MQ=255)
aCGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTtctc < 2:2020630/93‑1 (MQ=255)
aCGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTtctc < 1:482174/93‑1 (MQ=255)
aCGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTtctc > 1:1137146/1‑93 (MQ=255)
gAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTctg > 2:5130548/1‑93 (MQ=255)
aaGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTctgc > 2:4841640/1‑93 (MQ=255)
aGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTctgct > 1:2117013/1‑93 (MQ=255)
ggCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTctgctg > 1:1168371/1‑93 (MQ=255)
gCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTCTGCTgg < 2:1379573/93‑1 (MQ=255)
gACACCAATACTCGCCGCGTTAACTCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTCTGCTGGTg < 1:4752591/93‑1 (MQ=255)
gACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTCTGCTGGTg > 2:3182174/1‑93 (MQ=255)
acacCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTCTGCTGGTGa > 1:1331165/1‑93 (MQ=255)
|
GCGCTGTGCCGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACATCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTCTGCTGGTGA > NC_000913/2413422‑2413601
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGCGCTGTGCCGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACATCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTCTGCTGGTGACTTC > NC_000913/2413421‑2413605
|
GGCGCTGTGCCGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCA < SRR4302536.1705942/94‑1 (MQ=60)
GGCGCTGTGCCGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCCGAATGCGACCATCATCAAAGAAGGCGACACCA > SRR4302536.2453698/1‑94 (MQ=60)
GCGCTGTGCCGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAA < SRR4302536.924389/94‑1 (MQ=60)
GCGCTGTGCCGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAA < SRR4302536.3140638/94‑1 (MQ=60)
CGCTGTGCCGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAAT < SRR4302536.3103526/94‑1 (MQ=60)
GCTGTGCCGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATA < SRR4302536.5409035/94‑1 (MQ=60)
CTGTGCCGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATAC < SRR4302536.1789660/94‑1 (MQ=60)
CTGTGCCGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATAC < SRR4302536.4958715/94‑1 (MQ=60)
TGTGCCGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACT < SRR4302536.2697689/94‑1 (MQ=60)
TGTGCCGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACT < SRR4302536.6610581/94‑1 (MQ=60)
GTGCCGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTC < SRR4302536.5969374/94‑1 (MQ=60)
TGCCGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCG < SRR4302536.6568115/94‑1 (MQ=60)
TGCCGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCACCATCAACGAAAGCGTCACCAAAACTCG > SRR4302536.3527901/1‑94 (MQ=60)
TGCCGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCCCCACCTGAATGCGACCATCATCAAAGAAAGCGACACCAATACTCG > SRR4302536.256485/1‑94 (MQ=60)
GCCGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGC < SRR4302536.840897/94‑1 (MQ=60)
ccatcgagggttgacctgcacgccacacgtcCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACGCCAATACTCGCC < SRR4302536.5986183/63‑1 (MQ=60)
CGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCG < SRR4302536.6149299/94‑1 (MQ=60)
CGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCCCCACCTGAATGCGACCATCATCAAAGAAGGCGACACCAAAACTCGCCG > SRR4302536.3120336/1‑94 (MQ=60)
TGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCG > SRR4302536.1457218/1‑94 (MQ=60)
GAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACCAAGGCGACAACAATACTCGCCGCGGT > SRR4302536.5357290/1‑94 (MQ=60)
AGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTA < SRR4302536.4654171/94‑1 (MQ=60)
AGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTA < SRR4302536.2890733/94‑1 (MQ=60)
TTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTATAT < SRR4302536.3570564/94‑1 (MQ=60)
TTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAAT < SRR4302536.1451317/94‑1 (MQ=60)
TTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATC < SRR4302536.3624328/94‑1 (MQ=60)
TGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCC < SRR4302536.6788681/94‑1 (MQ=60)
TGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCC < SRR4302536.3045005/94‑1 (MQ=60)
TGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCC < SRR4302536.1251484/94‑1 (MQ=60)
CCTGATCGCGACTCGTGCGATCGATATGGCTCGGCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATCCTCGCCGCGTTAAATCCGTC < SRR4302536.1152742/94‑1 (MQ=60)
CCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTC > SRR4302536.2966727/1‑94 (MQ=60)
CCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTC < SRR4302536.1347268/94‑1 (MQ=60)
CCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGAACATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTC > SRR4302536.5961208/1‑94 (MQ=60)
ggttgagagtggggctaacgatgtgcttcaCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTGACT < SRR4302536.4353460/64‑1 (MQ=60)
GATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACT < SRR4302536.6649928/94‑1 (MQ=60)
GATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACT < SRR4302536.6585110/94‑1 (MQ=60)
TCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTT < SRR4302536.2259205/94‑1 (MQ=60)
GCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCT < SRR4302536.5970182/94‑1 (MQ=60)
GCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGGTAAATCCGTCACTTTCT > SRR4302536.3696499/1‑94 (MQ=60)
CGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTG > SRR4302536.1427432/1‑94 (MQ=60)
CGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTG > SRR4302536.3423432/1‑94 (MQ=60)
CGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTG < SRR4302536.5090171/94‑1 (MQ=60)
GACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGC > SRR4302536.2652673/1‑94 (MQ=60)
GACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGC > SRR4302536.17857/1‑94 (MQ=60)
GACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAAAGAAGGCGACACCAATACTCGCCGCCGTAAATCCGTCACTTTCTGC > SRR4302536.6758487/1‑94 (MQ=60)
GACTCGTGCGATCGATATGGCTCGCCACCCGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGC > SRR4302536.5731396/1‑94 (MQ=60)
GCTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCG < SRR4302536.4574465/94‑1 (MQ=60)
GTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAAGCGACACCAATAATCGCCGCGTTAAATCCGTCACTTTATGCGCACG > SRR4302536.5573013/1‑94 (MQ=60)
TGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGC < SRR4302536.2828460/94‑1 (MQ=60)
GCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCCCGCA > SRR4302536.6312893/1‑94 (MQ=60)
CGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAG > SRR4302536.6125014/1‑94 (MQ=60)
GATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGGCACCAATACCCGCCGCGTTAAATCCGTCACTTTCTTCGGCCGCAGC > SRR4302536.3914016/1‑94 (MQ=60)
GATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGC > SRR4302536.4760181/1‑94 (MQ=60)
GATCGATATGGCTCGCCACCTGAATGCGACCATCATCAAAGAAGGCGACACCCATACTCGCCGCGGTAAATCCGGCACTTTCTGCGCACGCAGC > SRR4302536.4750556/1‑94 (MQ=60)
ATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCA < SRR4302536.3850499/94‑1 (MQ=60)
TCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCAT < SRR4302536.3148939/94‑1 (MQ=60)
CGATATGGCTCGCCCCCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATT < SRR4302536.5844172/94‑1 (MQ=60)
CGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATT < SRR4302536.5406649/94‑1 (MQ=60)
GATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTC < SRR4302536.6283948/94‑1 (MQ=60)
GATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTC > SRR4302536.6828404/1‑94 (MQ=60)
ATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCC > SRR4302536.4877404/1‑94 (MQ=60)
ATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTCCGCACGCAGCATTCC < SRR4302536.5859484/94‑1 (MQ=60)
TGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCA < SRR4302536.3171995/94‑1 (MQ=60)
TGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCA > SRR4302536.6266236/1‑94 (MQ=60)
TGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCA > SRR4302536.1729576/1‑94 (MQ=60)
GGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCAC < SRR4302536.2027631/94‑1 (MQ=60)
GCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACA < SRR4302536.4226185/94‑1 (MQ=60)
CTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACAT < SRR4302536.6688170/94‑1 (MQ=60)
CTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACAT > SRR4302536.1285062/1‑94 (MQ=60)
CTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACAT < SRR4302536.6855063/94‑1 (MQ=60)
CCGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATG < SRR4302536.474933/94‑1 (MQ=60)
CGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGC > SRR4302536.647092/1‑94 (MQ=60)
CGCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGC > SRR4302536.5923175/1‑94 (MQ=60)
GCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCT < SRR4302536.1290579/94‑1 (MQ=60)
GCCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCT < SRR4302536.680469/94‑1 (MQ=60)
CCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGTTG < SRR4302536.4330651/94‑1 (MQ=60)
CCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTG > SRR4302536.1568017/1‑94 (MQ=60)
CCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTG < SRR4302536.3444788/94‑1 (MQ=60)
CCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTG < SRR4302536.2783272/94‑1 (MQ=60)
CCACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTG > SRR4302536.1949375/1‑94 (MQ=60)
CACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGG > SRR4302536.2923230/1‑94 (MQ=60)
CACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGG < SRR4302536.687649/94‑1 (MQ=60)
CACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGG > SRR4302536.3977387/1‑94 (MQ=60)
CACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGG > SRR4302536.2690874/1‑94 (MQ=60)
ACCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGA < SRR4302536.3158707/94‑1 (MQ=60)
CCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAG < SRR4302536.3674525/94‑1 (MQ=60)
CCTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAG < SRR4302536.1499651/94‑1 (MQ=60)
CTGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGC < SRR4302536.3756313/94‑1 (MQ=60)
TGAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCA > SRR4302536.3588618/1‑94 (MQ=60)
GAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCAC < SRR4302536.421099/94‑1 (MQ=60)
GAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCAC > SRR4302536.3049498/1‑94 (MQ=60)
GAATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCAC < SRR4302536.5061724/94‑1 (MQ=60)
AATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACT > SRR4302536.6545741/1‑94 (MQ=60)
ATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTT < SRR4302536.6332700/94‑1 (MQ=60)
ATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTT < SRR4302536.6012219/94‑1 (MQ=60)
ATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTT < SRR4302536.4834475/94‑1 (MQ=60)
ATGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTT > SRR4302536.4323387/1‑94 (MQ=60)
TGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTC < SRR4302536.3585432/94‑1 (MQ=60)
TGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTC < SRR4302536.1224529/94‑1 (MQ=60)
TGCGACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTC > SRR4302536.4510449/1‑94 (MQ=60)
GACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGGACGCAGCATTCCGCACATGCTGGAGCACTTCCGT > SRR4302536.1296724/1‑94 (MQ=60)
GACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGT > SRR4302536.5710348/1‑94 (MQ=60)
GACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGT > SRR4302536.1189772/1‑94 (MQ=60)
GACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGT > SRR4302536.466584/1‑94 (MQ=60)
ACCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTG > SRR4302536.47875/1‑94 (MQ=60)
CCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGC < SRR4302536.1627635/94‑1 (MQ=60)
CCATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGC > SRR4302536.3800856/1‑94 (MQ=60)
ATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGGACTTACGTGCCG > SRR4302536.1614469/1‑94 (MQ=60)
ATCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCG < SRR4302536.5085770/94‑1 (MQ=60)
ATCAGCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATTCTGGAGCACTTCCGTGCCG < SRR4302536.5781811/94‑1 (MQ=60)
TCATCAACGAAGGCGACACCAGTACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGG > SRR4302536.4963189/1‑94 (MQ=60)
TCATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGG > SRR4302536.1067647/1‑94 (MQ=60)
CATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGT > SRR4302536.6331334/1‑94 (MQ=60)
ATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTT > SRR4302536.5899950/1‑94 (MQ=60)
ATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTT > SRR4302536.1416431/1‑94 (MQ=60)
ATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTT > SRR4302536.4246788/1‑94 (MQ=60)
ATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTT > SRR4302536.6438094/1‑94 (MQ=60)
ATCAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTT < SRR4302536.5893095/94‑1 (MQ=60)
CAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCT > SRR4302536.6337219/1‑94 (MQ=60)
CAACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCT > SRR4302536.820876/1‑94 (MQ=60)
AACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTC > SRR4302536.1171337/1‑94 (MQ=60)
AACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTC > SRR4302536.4736383/1‑94 (MQ=60)
AACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTC > SRR4302536.6017566/1‑94 (MQ=60)
ACGAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTCT < SRR4302536.494707/94‑1 (MQ=60)
GAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGNAGCACTTCCGTGCCGGTTCTCTGC > SRR4302536.2713152/1‑94 (MQ=60)
GAAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTCTGC > SRR4302536.1525330/1‑94 (MQ=60)
AAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTCTGCT < SRR4302536.705729/94‑1 (MQ=60)
AAGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTCTGCT > SRR4302536.2180620/1‑94 (MQ=60)
AGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTCTGCTG > SRR4302536.1203530/1‑94 (MQ=60)
AGGCGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTCTGCTG < SRR4302536.6161433/94‑1 (MQ=60)
CGACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTCTGCTGGTG > SRR4302536.1935251/1‑94 (MQ=60)
GACACCAATACTCGCCGCGTTAACTCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTCTGCTGGTGA < SRR4302536.4895639/94‑1 (MQ=60)
GACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTCTGCTGGTGA > SRR4302536.1370905/1‑94 (MQ=60)
GACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTCTGCTGGTGA > SRR4302536.1341162/1‑94 (MQ=60)
ACACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTCTGCTGGTGAC > SRR4302536.4699900/1‑94 (MQ=60)
CACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTCTGCTGGTGACT < SRR4302536.1448618/94‑1 (MQ=60)
CACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTCTGCTGGTGACT > SRR4302536.5898262/1‑94 (MQ=60)
CACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTCTGCTGGTGACT < SRR4302536.875676/94‑1 (MQ=60)
CACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACCCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTCTGCTGGTGACT < SRR4302536.461088/94‑1 (MQ=60)
ACCAATACTCGCCGCGTTAACTCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTCTGCTGGTGACTT > SRR4302536.6742829/1‑94 (MQ=60)
ACCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTCTGCTGGTGACTT > SRR4302536.713858/1‑94 (MQ=60)
CCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTCTGCTGGTGACTTC > SRR4302536.1341397/1‑94 (MQ=60)
CCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTCTGCTGGTGACTTC > SRR4302536.3894933/1‑94 (MQ=60)
|
GGCGCTGTGCCGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACATCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTCTGCTGGTGACTTC > NC_000913/2413421‑2413605
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
