Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I2 R1 1475 266.7 13469680 98.2% 13227225 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,393,906 T→C intergenic (‑4243/+57) tldD ← / ← cafA TldD/CafA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,393,9060TC99.6% 911.2 / NA 277intergenic (‑4243/+57)tldD/cafATldD/CafA
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (154/122);  minor base A (0/1);  total (154/123)
Fisher's exact test for biased strand distribution p-value = 4.44e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 284 total aligned reads displayed.

CGCAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCTTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGTT  >  NC_000913/3393816‑3393995
                                                                                          |                                                                                         
cGCAGGCGGCTAACCAGCAGGGCAGCGATCACACCGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTg                                                                                         <  1:3135522/93‑1 (MQ=255)
 gCAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGt                                                                                        >  1:4247527/1‑93 (MQ=255)
 gCAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGt                                                                                        >  1:3738840/1‑93 (MQ=255)
  cAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTc                                                                                       <  2:171553/93‑1 (MQ=255)
    ggCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGGAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTg                                                                                     >  2:3398737/1‑93 (MQ=255)
     gCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGc                                                                                    <  2:91179/93‑1 (MQ=255)
      ccGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCt                                                                                   >  1:472510/1‑93 (MQ=255)
           aaCCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTaaaaa                                                                              >  2:227/1‑93 (MQ=255)
           aaCCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTaaaaa                                                                              >  2:57415/1‑93 (MQ=255)
           aaCCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTaaaaa                                                                              >  1:5328346/1‑93 (MQ=255)
            aCCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAAt                                                                             >  2:5627888/1‑93 (MQ=255)
            aCCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAAt                                                                             <  2:6479575/93‑1 (MQ=255)
             ccAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAAtg                                                                            <  2:4808243/93‑1 (MQ=255)
              cagcagGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAAtgt                                                                           >  1:2682045/1‑93 (MQ=255)
               agcagGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAAtgtg                                                                          >  2:5446610/1‑93 (MQ=255)
               agcagGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAAtgtg                                                                          >  2:1099896/1‑93 (MQ=255)
                gcagGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGa                                                                         >  1:756921/1‑93 (MQ=255)
                gcagGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGa                                                                         >  1:3609406/1‑93 (MQ=255)
                 cagGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGAc                                                                        <  1:3016761/93‑1 (MQ=255)
                 cagGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGAc                                                                        <  2:6255371/93‑1 (MQ=255)
                 cagGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGAc                                                                        <  1:5973152/93‑1 (MQ=255)
                 cagGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGAc                                                                        >  2:842779/1‑93 (MQ=255)
                  agGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACt                                                                       >  1:6726322/1‑93 (MQ=255)
                   gggCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTc                                                                      <  1:3260613/93‑1 (MQ=255)
                   gggCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTc                                                                      >  1:4962906/1‑93 (MQ=255)
                     gCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCaa                                                                    >  1:2159575/1‑93 (MQ=255)
                        gCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCaaaaa                                                                 >  2:4070989/1‑93 (MQ=255)
                        gCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCaaaaa                                                                 >  2:3231618/1‑93 (MQ=255)
                        gCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGCCTGCTAAAAATGTGACTCaaaaa                                                                 >  2:4388906/1‑93 (MQ=255)
                          gATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCTCCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAAcc                                                               <  1:5437892/93‑1 (MQ=255)
                           aTCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAAccc                                                              >  1:1844885/1‑93 (MQ=255)
                           aTCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAAccc                                                              <  1:2467380/93‑1 (MQ=255)
                           aTCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAAccc                                                              >  2:1376515/1‑93 (MQ=255)
                           aTCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAAccc                                                              >  1:2931255/1‑93 (MQ=255)
                            tCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCt                                                             >  1:174786/1‑93 (MQ=255)
                              acaACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCttt                                                           <  2:3003949/93‑1 (MQ=255)
                                 aCGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGcc                                                        >  2:4933358/1‑93 (MQ=255)
                                   gAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCgg                                                      >  1:4322624/1‑93 (MQ=255)
                                    aGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGa                                                     <  1:858652/93‑1 (MQ=255)
                                    aGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGa                                                     >  1:4847219/1‑93 (MQ=255)
                                     gcgcGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGAt                                                    >  1:1061066/1‑93 (MQ=255)
                                     gcgcGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGAt                                                    <  2:4998236/93‑1 (MQ=255)
                                     gcgcGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGAt                                                    <  2:804523/93‑1 (MQ=255)
                                      cgcgGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATg                                                   >  2:3328204/1‑93 (MQ=255)
                                       gcgGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATgg                                                  <  2:37399/93‑1 (MQ=255)
                                        cgGCTCCAGTAAGCACTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATggc                                                 <  1:2048255/93‑1 (MQ=255)
                                         ggCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATggcg                                                >  1:5757020/1‑93 (MQ=255)
                                          gCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATggcgg                                               >  2:5514583/1‑93 (MQ=255)
                                            tCCAGTAAACAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGcc                                             >  1:6508537/1‑93 (MQ=255)
                                             ccAGTAAGCATTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGccc                                            <  1:2867743/93‑1 (MQ=255)
                                             ccAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAGCCCTTTGCCGGATGGCGGccc                                            <  1:2595693/93‑1 (MQ=255)
                                             ccAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGccc                                            <  1:3169901/93‑1 (MQ=255)
                                             ccAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGccc                                            <  2:2231469/93‑1 (MQ=255)
                                              cAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCCTTGCCGGATGGCGGCCCa                                           >  1:6480515/1‑93 (MQ=255)
                                               aGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAg                                          >  2:4315413/1‑93 (MQ=255)
                                                gTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGc                                         <  2:3701117/93‑1 (MQ=255)
                                                gTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGc                                         >  2:988475/1‑93 (MQ=255)
                                                gTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGc                                         >  1:2377394/1‑93 (MQ=255)
                                                gTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGc                                         <  1:3893520/93‑1 (MQ=255)
                                                      aGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGt                                   <  2:2089427/93‑1 (MQ=255)
                                                        tAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGttt                                 <  2:1843927/93‑1 (MQ=255)
                                                        tAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGttt                                 <  1:2721230/93‑1 (MQ=255)
                                                         aaaaTCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTa                                >  1:5122187/1‑93 (MQ=255)
                                                          aaaTCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTAc                               >  2:3490673/1‑93 (MQ=255)
                                                          aaaTCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTAc                               <  1:6143428/93‑1 (MQ=255)
                                                           aaTCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTAca                              <  1:6355302/93‑1 (MQ=255)
                                                           aaTCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTAca                              <  1:3389121/93‑1 (MQ=255)
                                                            aTCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTAcat                             <  1:5265132/93‑1 (MQ=255)
                                                             tCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTAcatc                            >  1:4130093/1‑93 (MQ=255)
                                                              ccccGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTAcatca                           >  2:2549961/1‑93 (MQ=255)
                                                              ccccGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTAcatca                           >  2:1170521/1‑93 (MQ=255)
                                                               cccGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTAcatcat                          >  2:2527588/1‑93 (MQ=255)
                                                                ccGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCAtt                         <  2:2968226/93‑1 (MQ=255)
                                                                 cGGCAATCGCCTCACCCGTCACTCCCTGTCTGATAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTa                        <  2:1870544/93‑1 (MQ=255)
                                                                  ggCAGTCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTac                       <  2:28170/93‑1 (MQ=255)
                                                                    cAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTacga                     >  1:4485907/1‑93 (MQ=255)
                                                                     aaTCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTacgac                    >  1:6293952/1‑93 (MQ=255)
                                                                     aaTCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTacgac                    >  2:3056489/1‑93 (MQ=255)
                                                                     aaTCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTacgac                    >  1:1625998/1‑93 (MQ=255)
                                                                      aTCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTacgacg                   >  1:1983095/1‑93 (MQ=255)
                                                                      aTCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTaagacg                   >  2:696288/1‑93 (MQ=255)
                                                                       tCGCCTCCCCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGt                  <  2:5079398/93‑1 (MQ=255)
                                                                       tCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGt                  <  2:3159071/93‑1 (MQ=255)
                                                                       tCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGt                  <  2:1042799/93‑1 (MQ=255)
                                                                        cGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTc                 >  1:5015131/1‑93 (MQ=255)
                                                                         gCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCa                <  2:4564401/93‑1 (MQ=255)
                                                                           cTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCaaa              >  2:1015199/1‑93 (MQ=255)
                                                                            tCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTTCATCATTACGACGTCAAAc             <  1:568212/93‑1 (MQ=255)
                                                                            tCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAAc             <  1:6040096/93‑1 (MQ=255)
                                                                            tCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAAc             >  1:109078/1‑93 (MQ=255)
                                                                               cccGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGc          >  2:5324287/1‑93 (MQ=255)
                                                                               cccGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGc          <  2:1624864/93‑1 (MQ=255)
                                                                               cccGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGc          <  1:4403760/93‑1 (MQ=255)
                                                                                  gTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTcc       <  1:1489720/93‑1 (MQ=255)
                                                                                   tCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCt      >  2:6653450/1‑93 (MQ=255)
                                                                                    cACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTg     >  2:5235979/1‑93 (MQ=255)
                                                                                     aCTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTgg    >  1:2223432/1‑93 (MQ=255)
                                                                                      cTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGt   <  2:6102068/93‑1 (MQ=255)
                                                                                      cTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTG‑TTACATCATTACGACCGCAAACTGCTCCTgggt  >  2:5940742/1‑91 (MQ=255)
                                                                                       tCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGtt  <  2:3111658/93‑1 (MQ=255)
                                                                                          |                                                                                         
CGCAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCTTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGTT  >  NC_000913/3393816‑3393995

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ATACGCAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCTTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGTTATAG  >  NC_000913/3393813‑3393999
                                                                                             |                                                                                             
ATACGCAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCC                                                                                               <  SRR4302536.1620431/94‑1 (MQ=60)
 TACGCAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCT                                                                                              <  SRR4302536.6539615/94‑1 (MQ=60)
 TACGCAGGCCGCGAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCT                                                                                              <  SRR4302536.922816/94‑1 (MQ=60)
  ACCCAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTG                                                                                             <  SRR4302536.1323116/94‑1 (MQ=60)
   CGCAGGCGGCTAACCAGCAGGGCAGCGATCACACCGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGT                                                                                            <  SRR4302536.3227267/94‑1 (MQ=60)
   CGCAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGT                                                                                            >  SRR4302536.3850586/1‑94 (MQ=60)
   CGCAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGT                                                                                            >  SRR4302536.4374047/1‑94 (MQ=60)
   CGCAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGT                                                                                            >  SRR4302536.4365846/1‑94 (MQ=60)
     CAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCT                                                                                          >  SRR4302536.2742424/1‑94 (MQ=60)
        GCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCT                                                                                       >  SRR4302536.484830/1‑94 (MQ=60)
          CGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAA                                                                                     >  SRR4302536.3016996/1‑94 (MQ=60)
          CGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAA                                                                                     >  SRR4302536.1757444/1‑94 (MQ=60)
          CGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAA                                                                                     >  SRR4302536.929014/1‑94 (MQ=60)
           GCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAA                                                                                    >  SRR4302536.3562153/1‑94 (MQ=60)
           GCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAA                                                                                    >  SRR4302536.1968185/1‑94 (MQ=60)
            CTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAA                                                                                   >  SRR4302536.4519595/1‑94 (MQ=60)
             TAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAA                                                                                  >  SRR4302536.5487543/1‑94 (MQ=60)
               ACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATG                                                                                >  SRR4302536.3172014/1‑94 (MQ=60)
               ACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATG                                                                                >  SRR4302536.4241739/1‑94 (MQ=60)
               ACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATG                                                                                >  SRR4302536.1958531/1‑94 (MQ=60)
                CCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGT                                                                               >  SRR4302536.2939207/1‑94 (MQ=60)
                CCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGT                                                                               >  SRR4302536.2762183/1‑94 (MQ=60)
                CCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGT                                                                               >  SRR4302536.1318146/1‑94 (MQ=60)
                 ccggAGGGCAACGATCACAACGAGCGCGGCTCCAGTAAGGAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTG                                                                              <  SRR4302536.1857458/90‑1 (MQ=60)
                  AGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGT                                                                             >  SRR4302536.5583432/1‑94 (MQ=60)
                  AGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGA                                                                             >  SRR4302536.3717317/1‑94 (MQ=60)
                  AGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGA                                                                             >  SRR4302536.779122/1‑94 (MQ=60)
                    CAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACT                                                                           >  SRR4302536.4203199/1‑94 (MQ=60)
                    CAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACT                                                                           >  SRR4302536.6926134/1‑94 (MQ=60)
                    CAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACT                                                                           <  SRR4302536.3105419/94‑1 (MQ=60)
                    CAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACT                                                                           <  SRR4302536.6151203/94‑1 (MQ=60)
                    CAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACT                                                                           >  SRR4302536.3227099/1‑94 (MQ=60)
                     TGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTC                                                                          >  SRR4302536.5112001/1‑94 (MQ=60)
                      GGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCA                                                                         <  SRR4302536.4966457/94‑1 (MQ=60)
                      GGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCA                                                                         <  SRR4302536.772484/94‑1 (MQ=60)
                      GGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCA                                                                         <  SRR4302536.3356228/94‑1 (MQ=60)
                       GGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAA                                                                        >  SRR4302536.2224525/1‑94 (MQ=60)
                          AGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAA                                                                     >  SRR4302536.3770833/1‑94 (MQ=60)
                          AGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGAATCAAAAA                                                                     >  SRR4302536.1765275/1‑94 (MQ=60)
                          AGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGACACTCCCTGTCTGCTAAAAATGTGACTCAAAAA                                                                     >  SRR4302536.4391756/1‑94 (MQ=60)
                          AGCGATCACAACGAGCGCAGCTCCATTAAGCAGTAAAATACCCGGCAATCGACTCACCAGTCACTCTCTGTCTGCTAAAAATGTGACTCAAAGA                                                                     >  SRR4302536.3102644/1‑94 (MQ=60)
                            CGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACC                                                                   <  SRR4302536.5828329/94‑1 (MQ=60)
                             GATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCTCCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCC                                                                  <  SRR4302536.5600516/94‑1 (MQ=60)
                             GATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCC                                                                  >  SRR4302536.3017749/1‑94 (MQ=60)
                             GATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCC                                                                  >  SRR4302536.1018269/1‑94 (MQ=60)
                             GATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCC                                                                  >  SRR4302536.1900463/1‑94 (MQ=60)
                             GATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCC                                                                  <  SRR4302536.2390140/94‑1 (MQ=60)
                             GATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAAACC                                                                  >  SRR4302536.1871820/1‑94 (MQ=60)
                              ATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCT                                                                 >  SRR4302536.179356/1‑94 (MQ=60)
                              ATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCT                                                                 <  SRR4302536.2541876/94‑1 (MQ=60)
                               aaACAACGAGCGCGGCTCAAGTAAGCAGTAAAGTCCCCGTCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTT                                                                <  SRR4302536.4890226/92‑1 (MQ=60)
                               TCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTT                                                                <  SRR4302536.2573206/94‑1 (MQ=60)
                                CACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCGCTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTT                                                               <  SRR4302536.3442688/94‑1 (MQ=60)
                                CACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTT                                                               >  SRR4302536.6066621/1‑94 (MQ=60)
                                CACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTT                                                               <  SRR4302536.2050326/94‑1 (MQ=60)
                                CACAACGAGCGCGGCTCAAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTT                                                               <  SRR4302536.4676256/94‑1 (MQ=60)
                                  CAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGC                                                             >  SRR4302536.2231080/1‑94 (MQ=60)
                                  CAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGC                                                             >  SRR4302536.258476/1‑94 (MQ=60)
                                  CAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGC                                                             >  SRR4302536.3973322/1‑94 (MQ=60)
                                     CGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGG                                                          >  SRR4302536.4640046/1‑94 (MQ=60)
                                     CGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGG                                                          >  SRR4302536.4452053/1‑94 (MQ=60)
                                      GAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGA                                                         >  SRR4302536.4993086/1‑94 (MQ=60)
                                      GAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGA                                                         >  SRR4302536.6178948/1‑94 (MQ=60)
                                      GAGCGCGGCTCCAGTAAGAAGTAAAATATCCGGCAATCGACCCTCCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCTTTTGCCGGA                                                         >  SRR4302536.893031/1‑94 (MQ=60)
                                       AGCGCGGCTCGAGTAAGCAGTAAAATCCCCGGCAATCGCCTCTCCCGTCACTCCCTGTCCGCTAAAAATGTGACTCAAAAACCCTTTGCCGGAT                                                        <  SRR4302536.4556651/94‑1 (MQ=60)
                                       AGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGAT                                                        <  SRR4302536.883889/94‑1 (MQ=60)
                                       AGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGAT                                                        >  SRR4302536.1092807/1‑94 (MQ=60)
                                        GCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATG                                                       >  SRR4302536.6531507/1‑94 (MQ=60)
                                        GCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATG                                                       <  SRR4302536.2205793/94‑1 (MQ=60)
                                           CGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCG                                                    >  SRR4302536.5928286/1‑94 (MQ=60)
                                           CGGCTCCAGTAAGCACTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCG                                                    <  SRR4302536.2109931/94‑1 (MQ=60)
                                            GGCTCAAGTAAGCAGTACAATCCACGGCAATAGCCTCACCCGTCACTCACTGTCTACTACAAATGTGACTCAAAAACCCTTTGCCGGATGGCGA                                                   <  SRR4302536.6924172/94‑1 (MQ=60)
                                            GGCGCGAGTAAGCAGTAAAAGCCCCGGCAATCGCCTCACCCGTCACTCCCTATCTGCTAAAAATGTGACTCAAAAGCCCTTTGCCGGATGGCGG                                                   <  SRR4302536.174729/94‑1 (MQ=60)
                                              CTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCC                                                 <  SRR4302536.3234953/94‑1 (MQ=60)
                                              CTCCAGTAAACAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCC                                                 >  SRR4302536.6702501/1‑94 (MQ=60)
                                               TCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCC                                                >  SRR4302536.6392006/1‑94 (MQ=60)
                                                CCAGTAAGCATTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCA                                               <  SRR4302536.2952452/94‑1 (MQ=60)
                                                CCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAGCCCTTTGCCGGATGGCGGCCCA                                               <  SRR4302536.2673629/94‑1 (MQ=60)
                                                CCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCA                                               <  SRR4302536.4419619/94‑1 (MQ=60)
                                                CCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCA                                               >  SRR4302536.6191202/1‑94 (MQ=60)
                                                CCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCA                                               <  SRR4302536.3262778/94‑1 (MQ=60)
                                                CCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCCTTGCCGGATGGCGGCCCA                                               >  SRR4302536.6673830/1‑94 (MQ=60)
                                                 CAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAG                                              >  SRR4302536.5438935/1‑94 (MQ=60)
                                                  AGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGC                                             >  SRR4302536.2449413/1‑94 (MQ=60)
                                                   GTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCA                                            <  SRR4302536.4009284/94‑1 (MQ=60)
                                                     AAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATC                                          >  SRR4302536.6621052/1‑94 (MQ=60)
                                                     AAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATC                                          >  SRR4302536.1592630/1‑94 (MQ=60)
                                                      AGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCT                                         >  SRR4302536.586783/1‑94 (MQ=60)
                                                      AGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCT                                         >  SRR4302536.2502331/1‑94 (MQ=60)
                                                      AGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCT                                         >  SRR4302536.289087/1‑94 (MQ=60)
                                                      AGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCT                                         <  SRR4302536.1167662/94‑1 (MQ=60)
                                                       GCAGTAAAAGCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAACCCCTTTGCCGGATGGCGGCCCAGCATCTG                                        <  SRR4302536.3014797/94‑1 (MQ=60)
                                                        CAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGT                                       <  SRR4302536.3051290/94‑1 (MQ=60)
                                                          GTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTT                                     <  SRR4302536.5390698/94‑1 (MQ=60)
                                                           TAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTA                                    <  SRR4302536.2802393/94‑1 (MQ=60)
                                                           TAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTA                                    >  SRR4302536.5275229/1‑94 (MQ=60)
                                                             AAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACA                                  <  SRR4302536.6326486/94‑1 (MQ=60)
                                                              AATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACAT                                 <  SRR4302536.51177/94‑1 (MQ=60)
                                                              AATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACAT                                 <  SRR4302536.6544633/94‑1 (MQ=60)
                                                              AATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACAT                                 <  SRR4302536.3489918/94‑1 (MQ=60)
                                                               ATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATC                                >  SRR4302536.4252537/1‑94 (MQ=60)
                                                               ATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATC                                <  SRR4302536.5422059/94‑1 (MQ=60)
                                                               ATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATC                                >  SRR4302536.5153319/1‑94 (MQ=60)
                                                               ACCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATC                                <  SRR4302536.1120855/94‑1 (MQ=60)
                                                                TCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCA                               <  SRR4302536.2783666/94‑1 (MQ=60)
                                                                  CCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATT                             <  SRR4302536.5241004/94‑1 (MQ=60)
                                                                  CCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATT                             <  SRR4302536.5442893/94‑1 (MQ=60)
                                                                  CCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATT                             >  SRR4302536.6709783/1‑94 (MQ=60)
                                                                   caaGCAATCGCCTCACCCGTCACTCGCTGTCTGATAAAAATGTGACTCAAAATCCCTTTGCCGGATGGCGGCGCAGAATCTGTTTACATCATTA                            <  SRR4302536.2236152/91‑1 (MQ=60)
                                                                   CCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTA                            <  SRR4302536.3940027/94‑1 (MQ=60)
                                                                    CGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTAC                           >  SRR4302536.667730/1‑94 (MQ=60)
                                                                     GGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACG                          <  SRR4302536.2207832/94‑1 (MQ=60)
                                                                     CGCAATCGCCCCCCCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACG                          <  SRR4302536.6394378/94‑1 (MQ=60)
                                                                      GCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGA                         >  SRR4302536.4620629/1‑94 (MQ=60)
                                                                      GCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGA                         <  SRR4302536.5855390/94‑1 (MQ=60)
                                                                       CAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGAC                        >  SRR4302536.1673336/1‑94 (MQ=60)
                                                                       CAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGAC                        >  SRR4302536.6481454/1‑94 (MQ=60)
                                                                        AATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACG                       >  SRR4302536.3049809/1‑94 (MQ=60)
                                                                        AATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACG                       >  SRR4302536.2042732/1‑94 (MQ=60)
                                                                        AATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACG                       <  SRR4302536.6223156/94‑1 (MQ=60)
                                                                        AATCGCCTCACCCGTCACTCCCCGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACG                       >  SRR4302536.2251050/1‑94 (MQ=60)
                                                                         ATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGT                      >  SRR4302536.627183/1‑94 (MQ=60)
                                                                         ATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGT                      >  SRR4302536.766101/1‑94 (MQ=60)
                                                                          TCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTC                     >  SRR4302536.6548408/1‑94 (MQ=60)
                                                                          TCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTC                     >  SRR4302536.5165520/1‑94 (MQ=60)
                                                                           CGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCA                    <  SRR4302536.2497123/94‑1 (MQ=60)
                                                                           CGCCTCAACCGTCACTCCCTGTCTGCTAAACCTGTGTCTCACAATCCCTTTGCTGGATGGCTGCCCTGCATCTGTTTACATCATTACCACCTCA                    >  SRR4302536.2174386/1‑94 (MQ=28)
                                                                            GCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATTTGTTTACATCATTACGACGTCAA                   <  SRR4302536.801406/94‑1 (MQ=60)
                                                                             CCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAA                  >  SRR4302536.4913340/1‑94 (MQ=60)
                                                                              CTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAAC                 >  SRR4302536.111971/1‑94 (MQ=60)
                                                                              CTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAAC                 <  SRR4302536.5208045/94‑1 (MQ=60)
                                                                              CTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAAC                 >  SRR4302536.4478781/1‑94 (MQ=60)
                                                                               TCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTTCATCATTACGACGTCAAACT                <  SRR4302536.582679/94‑1 (MQ=60)
                                                                               TCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACT                <  SRR4302536.6220237/94‑1 (MQ=60)
                                                                                CACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTG               <  SRR4302536.6113632/94‑1 (MQ=60)
                                                                                CACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTG               >  SRR4302536.3652136/1‑94 (MQ=60)
                                                                                 ACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGAAGTCAAACTCC              >  SRR4302536.3297262/1‑94 (MQ=60)
                                                                                  CCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCT             <  SRR4302536.2790271/94‑1 (MQ=60)
                                                                                  CCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCT             <  SRR4302536.4535435/94‑1 (MQ=60)
                                                                                   CCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTC            <  SRR4302536.340743/94‑1 (MQ=60)
                                                                                   CCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTC            >  SRR4302536.3317001/1‑94 (MQ=60)
                                                                                     GTCCCTCCCTGTCTGCTAAAAATGTGACTAAAAATCCCGTTGCCGGATGGCGGCCCAGCATCTGTTTTCATCATTACGACGTCAAACTGCTCCG          <  SRR4302536.2981328/94‑1 (MQ=60)
                                                                                     GTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCT          <  SRR4302536.1533743/94‑1 (MQ=60)
                                                                                     GTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCT          <  SRR4302536.858939/94‑1 (MQ=60)
                                                                                     GTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCT          <  SRR4302536.4997865/94‑1 (MQ=60)
                                                                                      TCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTG         <  SRR4302536.6701079/94‑1 (MQ=60)
                                                                                       CACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGG        <  SRR4302536.548309/94‑1 (MQ=60)
                                                                                       CACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGG        >  SRR4302536.2290681/1‑94 (MQ=60)
                                                                                        ACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGT       <  SRR4302536.5284568/94‑1 (MQ=60)
                                                                                         CTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGTT      >  SRR4302536.1581006/1‑94 (MQ=60)
                                                                                         CTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGTT      <  SRR4302536.2358232/94‑1 (MQ=60)
                                                                                         CTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGTT      <  SRR4302536.4611984/94‑1 (MQ=60)
                                                                                          TCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGTTA     >  SRR4302536.3534732/1‑94 (MQ=60)
                                                                                          TCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGTTA     <  SRR4302536.3809787/94‑1 (MQ=60)
                                                                                          TCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGTTA     >  SRR4302536.5513340/1‑94 (MQ=60)
                                                                                           CCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGTTAT    >  SRR4302536.3336773/1‑94 (MQ=60)
                                                                                           CCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGTTAT    >  SRR4302536.472899/1‑94 (MQ=60)
                                                                                            CCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGTTATA   >  SRR4302536.4265663/1‑94 (MQ=60)
                                                                                             CTGTCTGCTAAAAATGTGACTCAAAATCCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGTTATAG  <  SRR4302536.3617929/94‑1 (MQ=60)
                                                                                             CTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGTTATAG  <  SRR4302536.3575697/94‑1 (MQ=60)
                                                                                             |                                                                                             
ATACGCAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCTTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGTTATAG  >  NC_000913/3393813‑3393999

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑