Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I2 R1	1475	266.7	13469680	98.2%	13227225	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,483,814	C→T	H20Y (CAC→TAC)	crp →	cyclic AMP receptor protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,483,814	0	C	T	99.7%	1099.8 / NA	293	H20Y (CAC→TAC)	crp	cyclic AMP receptor protein
Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (141/151); minor base G (0/1); total (141/152)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 300 total aligned reads displayed.

CTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCA  >  NC_000913/3483724‑3483903

ctGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCtac                                                                                         <  2:5611360/93‑1 (MQ=255)

  ggAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGCCCCGACTCTCGAATGGTTCTTGTCTCATTGCTACAt                                                                                       <  1:810838/93‑1 (MQ=255)

  ggAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGCCCCGACTCTCGAATGGTTCTTGTCTCATTGCTACAt                                                                                       <  1:4547888/93‑1 (MQ=255)

   gagaAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACAtt                                                                                      >  2:6054811/1‑93 (MQ=255)

    agaAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTc                                                                                     >  1:6328728/1‑93 (MQ=255)

    agaAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTc                                                                                     >  1:4370306/1‑93 (MQ=255)

    agaAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTc                                                                                     <  1:2574650/93‑1 (MQ=255)

     gaAAGCTTATAACAGAGGATACCCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCa                                                                                    <  1:4267415/93‑1 (MQ=255)

         gCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGAGCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAg                                                                                <  2:3567741/93‑1 (MQ=255)

         gCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAg                                                                                >  1:1011507/1‑93 (MQ=255)

         gCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAg                                                                                <  1:5858135/93‑1 (MQ=255)

         gCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAg                                                                                >  2:4478663/1‑93 (MQ=255)

          cTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGt                                                                               >  2:3115321/1‑93 (MQ=255)

           ttATAACAGAGGATAACCGCGCATGGCGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTa                                                                              >  2:2828033/1‑93 (MQ=255)

             ataACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTAcc                                                                            >  1:96064/1‑93 (MQ=255)

              taACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTAccc                                                                           <  1:1189329/93‑1 (MQ=255)

              taACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTAccc                                                                           >  1:4113266/1‑93 (MQ=255)

               aaCAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCa                                                                          <  2:5110483/93‑1 (MQ=255)

                aCAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCAt                                                                         >  1:5804609/1‑93 (MQ=255)

                 cggagGATAACCGCGCAT‑GTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATcc                                                                       >  1:5311256/3‑93 (MQ=255)

                 cAGAGGATAACCGCGCATGGTGCTTGGCAACCCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATc                                                                        <  2:1288584/93‑1 (MQ=255)

                  agagGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGCCCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATcc                                                                       <  2:4770738/93‑1 (MQ=255)

                    agGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCaa                                                                     <  2:6240899/93‑1 (MQ=255)

                     ggATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAag                                                                    >  1:1233689/1‑93 (MQ=255)

                       aTAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAagag                                                                  >  2:5380959/1‑93 (MQ=255)

                        tAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGc                                                                 <  1:5724271/93‑1 (MQ=255)

                         aaCCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCa                                                                >  1:1977976/1‑93 (MQ=255)

                            cgcgCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGc                                                             <  1:5024033/93‑1 (MQ=255)

                             gcgcATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCt                                                            <  2:6114216/93‑1 (MQ=255)

                              cgcATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCtt                                                           >  2:1375120/1‑93 (MQ=255)

                              cgcATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCtt                                                           <  1:2765417/93‑1 (MQ=255)

                               gcATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTa                                                          >  2:1873013/1‑93 (MQ=255)

                                cATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTAt                                                         >  2:863079/1‑93 (MQ=255)

                                cATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTAt                                                         >  2:5758574/1‑93 (MQ=255)

                                cATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTAt                                                         <  2:2599503/93‑1 (MQ=255)

                                cATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTAt                                                         >  2:3921986/1‑93 (MQ=255)

                                 aTGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTAtt                                                        >  1:1389760/1‑93 (MQ=255)

                                 aTGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTAtt                                                        <  1:3302950/93‑1 (MQ=255)

                                 aTGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTAtt                                                        >  1:5580388/1‑93 (MQ=255)

                                 aTGGTGCTTGCCAACCCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTAtt                                                        <  1:1568951/93‑1 (MQ=255)

                                  tGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTc                                                       <  2:684056/93‑1 (MQ=255)

                                    gTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCAc                                                     >  2:6617708/1‑93 (MQ=255)

                                     tGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCAcc                                                    <  2:1786132/93‑1 (MQ=255)

                                      gCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCa                                                   >  2:2138729/1‑93 (MQ=255)

                                        ttGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAgg                                                 >  1:5097410/1‑93 (MQ=255)

                                          ggCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAgggg                                               >  1:4630152/1‑92 (MQ=255)

                                          ggCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGt                                               <  1:4441190/93‑1 (MQ=255)

                                              aaCCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGaaa                                           >  2:3871282/1‑93 (MQ=255)

                                               aCCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGaaaa                                          <  2:3997404/93‑1 (MQ=255)

                                               aCCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGaaaa                                          <  2:6440346/93‑1 (MQ=255)

                                                ccGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGaaaaa                                         <  2:5659059/93‑1 (MQ=255)

                                                ccGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGaaaaa                                         <  1:108032/93‑1 (MQ=255)

                                                ccGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGaaaaa                                         >  1:5361675/1‑93 (MQ=255)

                                                  gCAAACAAACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGc                                       <  2:4267555/93‑1 (MQ=255)

                                                   cAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCg                                      <  1:5258927/93‑1 (MQ=255)

                                                    aaaCAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCgg                                     >  2:2667803/1‑93 (MQ=255)

                                                     aaCAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCAGa                                    >  1:3755778/1‑93 (MQ=255)

                                                      aCAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGaa                                   <  1:1350534/93‑1 (MQ=255)

                                                       cAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGaaa                                  <  1:6539225/93‑1 (MQ=255)

                                                       cAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGaaa                                  <  2:2424587/93‑1 (MQ=255)

                                                        agccccGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTCCCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAAc                                 <  2:3441494/90‑1 (MQ=255)

                                                         gACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACg                                >  1:3208531/1‑93 (MQ=255)

                                                         gACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACg                                >  2:1735483/1‑93 (MQ=255)

                                                         gACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACg                                >  2:4201653/1‑93 (MQ=255)

                                                          ccccGCCTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGc                               <  1:3595490/92‑1 (MQ=255)

                                                          aCCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGc                               >  1:6041570/1‑93 (MQ=255)

                                                            ccGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAACAAGCGGAAACGCTg                             >  1:2411704/1‑93 (MQ=255)

                                                            ccGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTg                             <  2:3744355/93‑1 (MQ=255)

                                                             cGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGt                            <  2:3369017/93‑1 (MQ=255)

                                                              gACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCCAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGta                           >  2:2235331/1‑93 (MQ=255)

                                                              gACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGta                           >  1:3089326/1‑93 (MQ=255)

                                                               aCTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGtac                          >  1:349158/1‑93 (MQ=255)

                                                                 tctcGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGtacta                        <  2:1340576/93‑1 (MQ=255)

                                                                   tcGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACa                      >  2:1046161/1‑93 (MQ=255)

                                                                    cGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACAt                     <  2:3200070/93‑1 (MQ=255)

                                                                    cGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACAt                     >  2:4066463/1‑93 (MQ=255)

                                                                    cGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACAt                     <  1:4218620/93‑1 (MQ=255)

                                                                     gAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATc                    <  2:4558657/93‑1 (MQ=255)

                                                                     gAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATc                    >  1:1778653/1‑93 (MQ=255)

                                                                      aaTGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCg                   <  1:6632783/93‑1 (MQ=255)

                                                                       aTGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGt                  <  1:3923756/93‑1 (MQ=255)

                                                                        tGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGtt                 >  1:3999511/1‑93 (MQ=255)

                                                                        tGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGtt                 >  1:4925838/1‑93 (MQ=255)

                                                                          gTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTaa               >  2:121285/1‑93 (MQ=255)

                                                                          gTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTaa               >  1:2297869/1‑93 (MQ=255)

                                                                           ttCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTaaa              <  2:2006364/93‑1 (MQ=255)

                                                                           ttCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTaaa              <  1:6251021/93‑1 (MQ=255)

                                                                           ttCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTaaa              <  2:4925089/93‑1 (MQ=255)

                                                                           ttCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTaaa              <  1:3456916/93‑1 (MQ=255)

                                                                           ttCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTaaa              <  1:220101/93‑1 (MQ=255)

                                                                              ttGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGc           >  1:6489477/1‑93 (MQ=255)

                                                                                gTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGctc         <  2:1534233/93‑1 (MQ=255)

                                                                                gTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGctc         <  1:5197441/93‑1 (MQ=255)

                                                                                  ctcATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCtg       <  1:2093190/93‑1 (MQ=255)

                                                                                   tcATTGCTACATTCATAAGTACGCATCCAAGAGCACGCTTAGTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCtgt      <  1:4834503/93‑1 (MQ=255)

                                                                                   tcATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCtgt      >  1:2346090/1‑93 (MQ=255)

                                                                                    cATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCtgtg     >  1:5382324/1‑93 (MQ=255)

                                                                                     aTTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTgg    >  2:5872110/1‑93 (MQ=255)

                                                                                     aTTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTgg    >  2:2104753/1‑93 (MQ=255)

                                                                                       tGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCa  <  2:3299891/93‑1 (MQ=255)

CTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCA  >  NC_000913/3483724‑3483903

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GCTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGC  >  NC_000913/3483721‑3483907

GCTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCACACCGCACACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCT                                                                                               >  SRR4302536.5138981/1‑94 (MQ=60)

GCTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCT                                                                                               >  SRR4302536.5143496/1‑94 (MQ=60)

 CTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTA                                                                                              >  SRR4302536.4197972/1‑94 (MQ=60)

 CTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTA                                                                                              >  SRR4302536.5139056/1‑94 (MQ=60)

    TGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACAT                                                                                           >  SRR4302536.4651541/1‑94 (MQ=60)

     GGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGCCCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATT                                                                                          <  SRR4302536.834616/94‑1 (MQ=60)

     GGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGCCCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATT                                                                                          <  SRR4302536.4684290/94‑1 (MQ=60)

     GGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATT                                                                                          <  SRR4302536.991062/94‑1 (MQ=60)

      GAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTC                                                                                         >  SRR4302536.6517207/1‑94 (MQ=60)

      GAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTC                                                                                         <  SRR4302536.4663872/94‑1 (MQ=60)

      GAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTC                                                                                         >  SRR4302536.4500868/1‑94 (MQ=60)

      GAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTC                                                                                         >  SRR4302536.3355216/1‑94 (MQ=60)

       AGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCA                                                                                        >  SRR4302536.4360759/1‑94 (MQ=60)

       AGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCA                                                                                        <  SRR4302536.2652061/94‑1 (MQ=60)

        GAAAGCTTATAACAGAGGATACCCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCAT                                                                                       <  SRR4302536.4394609/94‑1 (MQ=60)

         AAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATA                                                                                      <  SRR4302536.5972746/94‑1 (MQ=60)

         AAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATA                                                                                      <  SRR4302536.3439114/94‑1 (MQ=60)

          AAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAA                                                                                     <  SRR4302536.883046/94‑1 (MQ=60)

          AAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAA                                                                                     >  SRR4302536.4080177/1‑94 (MQ=60)

           AGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAG                                                                                    >  SRR4302536.1041362/1‑94 (MQ=60)

            GCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGT                                                                                   <  SRR4302536.2368095/94‑1 (MQ=60)

            GCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGT                                                                                   <  SRR4302536.3007752/94‑1 (MQ=60)

            GCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGT                                                                                   <  SRR4302536.6032658/94‑1 (MQ=60)

             CTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTA                                                                                  >  SRR4302536.4379028/1‑94 (MQ=60)

             CTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTA                                                                                  >  SRR4302536.2574921/1‑94 (MQ=60)

              TTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTAC                                                                                 >  SRR4302536.4914357/1‑94 (MQ=60)

              TTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTAC                                                                                 <  SRR4302536.6489325/94‑1 (MQ=60)

               TATAACAGAGGATACCCGCCCATGGTGCTTGGCAAACCGCAAACATACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACC                                                                                <  SRR4302536.113920/94‑1 (MQ=60)

               TATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACC                                                                                >  SRR4302536.98617/1‑94 (MQ=60)

               TATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACC                                                                                >  SRR4302536.546820/1‑94 (MQ=60)

               TATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACC                                                                                <  SRR4302536.6286445/94‑1 (MQ=60)

                ATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCC                                                                               >  SRR4302536.4235284/1‑94 (MQ=60)

                 TAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCA                                                                              >  SRR4302536.4308543/1‑94 (MQ=60)

                 TAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCA                                                                              <  SRR4302536.1225098/94‑1 (MQ=60)

                  AACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCAT                                                                             >  SRR4302536.5977476/1‑94 (MQ=60)

                   ACGGAGGATAACCGCGCAT‑GTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCC                                                                           >  SRR4302536.5469813/1‑94 (MQ=60)

                   ACGGAGGATAACCGCGCAT‑GTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCC                                                                           >  SRR4302536.5469812/1‑94 (MQ=60)

                    CAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCC                                                                           <  SRR4302536.2397506/94‑1 (MQ=60)

                    CAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCC                                                                           >  SRR4302536.3766245/1‑94 (MQ=60)

                     AGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCA                                                                          >  SRR4302536.1676065/1‑94 (MQ=60)

                     AGAGAATAACCGCGCATGGTGCTTGGCAACCCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCA                                                                          <  SRR4302536.3859244/94‑1 (MQ=60)

                       AGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAG                                                                        >  SRR4302536.1270730/1‑94 (MQ=60)

                         GATACCCCCGCATGTTCCTTGCCAACCCGCAAACAGCCCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAG                                                                      <  SRR4302536.607108/94‑1 (MQ=60)

                          ATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGC                                                                     <  SRR4302536.6208607/94‑1 (MQ=60)

                           TAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCA                                                                    <  SRR4302536.5894502/94‑1 (MQ=60)

                           TAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCA                                                                    >  SRR4302536.2037447/1‑94 (MQ=60)

                            AACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCAC                                                                   <  SRR4302536.275950/94‑1 (MQ=60)

                             ACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACG                                                                  >  SRR4302536.1605553/1‑94 (MQ=60)

                               CGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCT                                                                <  SRR4302536.5174623/94‑1 (MQ=60)

                                GAGCATGGGGCTTGGCAACCCGCAATCAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCGACATTCATAAGTACCCATCCAAGAGCACGCTT                                                               <  SRR4302536.2424955/94‑1 (MQ=60)

                                 CGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTA                                                              >  SRR4302536.6694745/1‑94 (MQ=60)

                                 CGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTA                                                              <  SRR4302536.5244599/94‑1 (MQ=60)

                                 CGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTA                                                              <  SRR4302536.2345460/94‑1 (MQ=60)

                                 CGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTA                                                              <  SRR4302536.2847658/94‑1 (MQ=60)

                                  GCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTAT                                                             >  SRR4302536.5537488/1‑94 (MQ=60)

                                   CATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATT                                                            >  SRR4302536.1431148/1‑94 (MQ=60)

                                   CATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATT                                                            >  SRR4302536.4417482/1‑94 (MQ=60)

                                   CATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATT                                                            <  SRR4302536.1180803/94‑1 (MQ=60)

                                   CATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATT                                                            >  SRR4302536.5746456/1‑94 (MQ=60)

                                    ATGGTGCTTGGCAAACCGCAACCAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTC                                                           <  SRR4302536.3571049/94‑1 (MQ=60)

                                    ATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTC                                                           <  SRR4302536.3400396/94‑1 (MQ=60)

                                    ATGGTGCTTGCCAACCCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTC                                                           <  SRR4302536.1614975/94‑1 (MQ=60)

                                      GGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCAC                                                         <  SRR4302536.1951727/94‑1 (MQ=60)

                                       GTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACC                                                        <  SRR4302536.5995628/94‑1 (MQ=60)

                                        TGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCA                                                       >  SRR4302536.2655076/1‑94 (MQ=60)

                                          CTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGG                                                     >  SRR4302536.5249830/1‑94 (MQ=60)

                                           TTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGG                                                    >  SRR4302536.4324197/1‑94 (MQ=60)

                                           TTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGG                                                    <  SRR4302536.5324583/94‑1 (MQ=60)

                                            TGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGG                                                   >  SRR4302536.4769276/1‑94 (MQ=60)

                                             GGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTG                                                  <  SRR4302536.2230928/94‑1 (MQ=60)

                                             GGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTG                                                  <  SRR4302536.4574519/94‑1 (MQ=60)

                                             GGCAAACCGCAAACACACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTG                                                  <  SRR4302536.209229/94‑1 (MQ=60)

                                                AAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAA                                               <  SRR4302536.5303743/94‑1 (MQ=60)

                                                AAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAA                                               >  SRR4302536.1422854/1‑94 (MQ=60)

                                                 AACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAA                                              <  SRR4302536.5076548/94‑1 (MQ=60)

                                                 AACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAA                                              >  SRR4302536.5966136/1‑94 (MQ=60)

                                                  agctcaagcaagcctGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGCCCCCAGCCAAGAGCACGCTTATTCACCAGGGTGAAAAA                                             <  SRR4302536.6607467/79‑1 (MQ=60)

                                                  ACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAA                                             <  SRR4302536.2013454/94‑1 (MQ=60)

                                                  ACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAA                                             >  SRR4302536.5521640/1‑94 (MQ=60)

                                                   CCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAG                                            <  SRR4302536.6861423/94‑1 (MQ=60)

                                                   CCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAG                                            <  SRR4302536.110904/94‑1 (MQ=60)

                                                   CCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAG                                            >  SRR4302536.1427552/1‑94 (MQ=60)

                                                      CAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGG                                         <  SRR4302536.5415646/94‑1 (MQ=60)

                                                       AAACAGACCTGACTCTCGAACGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGA                                        >  SRR4302536.6701375/1‑94 (MQ=60)

                                                       AAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGA                                        <  SRR4302536.4015052/94‑1 (MQ=60)

                                                       AAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGA                                        <  SRR4302536.1094994/94‑1 (MQ=60)

                                                       AAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGA                                        <  SRR4302536.6230754/94‑1 (MQ=60)

                                                       AAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCAGA                                        >  SRR4302536.3867979/1‑94 (MQ=60)

                                                        AACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAA                                       >  SRR4302536.511394/1‑94 (MQ=60)

                                                        AACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAA                                       >  SRR4302536.5890527/1‑94 (MQ=60)

                                                         ACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAA                                      >  SRR4302536.2519620/1‑94 (MQ=60)

                                                         ACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAA                                      <  SRR4302536.1390809/94‑1 (MQ=60)

                                                          CAGACGCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGTTTATTCACCAGGGTGAAAAAGCGAAAAC                                     >  SRR4302536.4531941/1‑94 (MQ=60)

                                                          CAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAAC                                     <  SRR4302536.6733986/94‑1 (MQ=60)

                                                           AGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACG                                    <  SRR4302536.3221182/94‑1 (MQ=60)

                                                           AGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACG                                    >  SRR4302536.679043/1‑94 (MQ=60)

                                                           AGACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACG                                    >  SRR4302536.3302662/1‑94 (MQ=60)

                                                            GACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGC                                   >  SRR4302536.5383195/1‑94 (MQ=60)

                                                            GACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGC                                   >  SRR4302536.6221759/1‑94 (MQ=60)

                                                             CCCCGCCTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCT                                  <  SRR4302536.3703010/94‑1 (MQ=60)

                                                             ACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCT                                  <  SRR4302536.5391454/94‑1 (MQ=60)

                                                             ACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCT                                  <  SRR4302536.2282501/94‑1 (MQ=60)

                                                             ACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCT                                  <  SRR4302536.4437997/94‑1 (MQ=60)

                                                             ACCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCT                                  <  SRR4302536.4038533/94‑1 (MQ=60)

                                                              CCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAACAAGCGGAAACGCTG                                 >  SRR4302536.2484647/1‑94 (MQ=60)

                                                              CCCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTG                                 <  SRR4302536.4708674/94‑1 (MQ=60)

                                                               CCGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGT                                >  SRR4302536.3656482/1‑94 (MQ=60)

                                                                CGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTA                               >  SRR4302536.4747195/1‑94 (MQ=60)

                                                                CGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTA                               >  SRR4302536.4178314/1‑94 (MQ=60)

                                                                CGACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTA                               >  SRR4302536.3179654/1‑94 (MQ=60)

                                                                 GACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTAC                              >  SRR4302536.358416/1‑94 (MQ=60)

                                                                  ACTCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACT                             >  SRR4302536.83364/1‑94 (MQ=60)

                                                                    TCTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGACAAAGCGGAAACGCTGTACTAC                           >  SRR4302536.6571149/1‑94 (MQ=60)

                                                                    TCTCGAATGGGTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTAC                           >  SRR4302536.5750588/1‑94 (MQ=60)

                                                                     CTCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACA                          <  SRR4302536.3529519/94‑1 (MQ=60)

                                                                      TCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACAT                         <  SRR4302536.2229850/94‑1 (MQ=60)

                                                                      TCGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACAT                         >  SRR4302536.5248964/1‑94 (MQ=60)

                                                                       CGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATC                        >  SRR4302536.5574008/1‑94 (MQ=60)

                                                                       CGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATC                        >  SRR4302536.1832438/1‑94 (MQ=60)

                                                                       CGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATC                        <  SRR4302536.4344110/94‑1 (MQ=60)

                                                                       CGAATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATC                        <  SRR4302536.1240625/94‑1 (MQ=60)

                                                                         AATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGT                      >  SRR4302536.1077510/1‑94 (MQ=60)

                                                                         AATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGT                      <  SRR4302536.6830072/94‑1 (MQ=60)

                                                                         AATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGT                      >  SRR4302536.4997009/1‑94 (MQ=60)

                                                                          ATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTT                     <  SRR4302536.3378788/94‑1 (MQ=60)

                                                                          ATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTT                     <  SRR4302536.4040357/94‑1 (MQ=60)

                                                                          ATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTT                     >  SRR4302536.4118182/1‑94 (MQ=60)

                                                                          ATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTT                     <  SRR4302536.6483895/94‑1 (MQ=60)

                                                                          ATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTT                     <  SRR4302536.5873503/94‑1 (MQ=60)

                                                                          ATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTT                     >  SRR4302536.5983902/1‑94 (MQ=60)

                                                                          ATGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTT                     >  SRR4302536.5073850/1‑94 (MQ=60)

                                                                           TGGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTA                    >  SRR4302536.2420413/1‑94 (MQ=60)

                                                                            GGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAA                   >  SRR4302536.2367599/1‑94 (MQ=60)

                                                                            GGTTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAA                   >  SRR4302536.1365715/1‑94 (MQ=60)

                                                                              TTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAG                 <  SRR4302536.225941/94‑1 (MQ=60)

                                                                              TTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAG                 <  SRR4302536.6437248/94‑1 (MQ=60)

                                                                              TTCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAG                 <  SRR4302536.3559887/94‑1 (MQ=60)

                                                                               TCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGG                >  SRR4302536.4501602/1‑94 (MQ=60)

                                                                               TCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGG                <  SRR4302536.1448512/94‑1 (MQ=60)

                                                                               TCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGG                <  SRR4302536.1689782/94‑1 (MQ=60)

                                                                               TCTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGG                <  SRR4302536.5541537/94‑1 (MQ=60)

                                                                                CTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGC               >  SRR4302536.5473249/1‑94 (MQ=60)

                                                                                CTTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGC               >  SRR4302536.6682989/1‑94 (MQ=60)

                                                                                 TTGTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCT              <  SRR4302536.4047256/94‑1 (MQ=60)

                                                                                   GTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCT            >  SRR4302536.294666/1‑94 (MQ=60)

                                                                                   GTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCT            <  SRR4302536.5352395/94‑1 (MQ=60)

                                                                                   GTCTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCT            <  SRR4302536.2042610/94‑1 (MQ=60)

                                                                                    TCTCATTGTTACATTCATAAGTACCCATCCAAGAGGACGCTTATTCACCAGGGTGATATAGCGGCAACGCTGTACTACATGGGTAAAGGCTCTT           >  SRR4302536.3581500/1‑94 (MQ=60)

                                                                                     CTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGT          >  SRR4302536.5027751/1‑94 (MQ=60)

                                                                                     CTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGT          >  SRR4302536.2417230/1‑94 (MQ=60)

                                                                                     CTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGT          >  SRR4302536.3248267/1‑94 (MQ=60)

                                                                                     CTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGT          >  SRR4302536.1332609/1‑94 (MQ=60)

                                                                                     CTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGT          >  SRR4302536.3683522/1‑94 (MQ=60)

                                                                                     CTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGT          <  SRR4302536.2156167/94‑1 (MQ=60)

                                                                                     CTCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGG          >  SRR4302536.683291/1‑94 (MQ=60)

                                                                                      TCATTGCTACATTCATAAGTACGCATCCAAGAGCACGCTTAGTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTG         <  SRR4302536.4980019/94‑1 (MQ=60)

                                                                                      TCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTG         >  SRR4302536.5542967/1‑94 (MQ=60)

                                                                                      TCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTG         <  SRR4302536.6776304/94‑1 (MQ=60)

                                                                                      TCATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTG         <  SRR4302536.4222743/94‑1 (MQ=60)

                                                                                       CATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGG        >  SRR4302536.4853759/1‑94 (MQ=60)

                                                                                       CATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGG        <  SRR4302536.5446205/94‑1 (MQ=60)

                                                                                       CATTGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGG        >  SRR4302536.1243063/1‑94 (MQ=60)

                                                                                          TGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAG     >  SRR4302536.300329/1‑94 (MQ=60)

                                                                                          TGCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAG     <  SRR4302536.6638199/94‑1 (MQ=60)

                                                                                           GCTACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGT    >  SRR4302536.3400325/1‑94 (MQ=60)

                                                                                             TACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGC  >  SRR4302536.6060802/1‑94 (MQ=60)

                                                                                             TACATTCAGAAGTACCCATCCAAGAGCACTCTTATTCACCAGGCTAAAAAAGCGCAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGC  <  SRR4302536.4574270/94‑1 (MQ=60)

GCTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGC  >  NC_000913/3483721‑3483907

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`