Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,510,121 |
+G |
intergenic (‑358/+151) |
yhfZ ← / ← trpS |
hypothetical protein/tryptophan tRNA synthetase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,510,120 | 1 | . | G | 93.7%
| 737.4
/ 40.9
| 239 | intergenic (‑357/+152) | yhfZ/trpS | hypothetical protein/tryptophan tRNA synthetase |
| Reads supporting (aligned to +/- strand): ref base . (10/5); new base G (133/91); total (143/96) |
| Fisher's exact test for biased strand distribution p-value = 7.87e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01 |
Only 100 of 270 total aligned reads displayed.
AAGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGG > NC_000913/3510028‑3510209
|
aaGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTcccc < 2:6140515/93‑1 (MQ=255)
aaGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTcccc < 1:6643590/93‑1 (MQ=255)
aGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑g < 1:4597727/93‑1 (MQ=255)
aGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑g > 1:4519649/1‑93 (MQ=255)
gATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑gg > 1:919764/1‑92 (MQ=255)
tAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTGCCC‑Ggtt < 1:1855386/93‑1 (MQ=255)
tAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑Ggtt > 1:1236249/1‑93 (MQ=255)
tAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑Ggtt < 1:1486323/93‑1 (MQ=255)
tAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑Ggtt > 1:1827363/1‑93 (MQ=255)
tAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑Ggtt > 1:4059614/1‑93 (MQ=255)
aGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑Ggtttc > 1:3832148/1‑91 (MQ=255)
ggCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCa < 2:1029989/93‑1 (MQ=255)
cAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGt > 2:634259/1‑93 (MQ=255)
cAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGt < 2:1904924/93‑1 (MQ=255)
aaCAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGtg > 1:1613004/1‑93 (MQ=255)
aaCAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGtg > 1:5405039/1‑93 (MQ=255)
aaCAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGtg < 2:4528901/93‑1 (MQ=255)
aaCAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGtg > 2:1425887/1‑93 (MQ=255)
aGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGtgatg > 2:163779/1‑93 (MQ=255)
cGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTgatgat < 2:3537397/93‑1 (MQ=255)
gagaTGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATa < 2:3247017/93‑1 (MQ=255)
gtgGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGc > 1:2911558/1‑93 (MQ=255)
ggAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCaa > 1:508442/1‑93 (MQ=255)
gAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCaaa > 1:2429459/1‑93 (MQ=255)
gAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCaaa > 2:2336535/1‑93 (MQ=255)
aaaCGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCaaaa > 1:6663035/1‑93 (MQ=255)
aCGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAAtt > 2:3326394/1‑93 (MQ=255)
aCGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAAtt < 1:5878883/93‑1 (MQ=255)
cGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTg < 1:581043/93‑1 (MQ=255)
gAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAATAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTg > 2:3560624/1‑93 (MQ=255)
gAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTg < 2:47160/93‑1 (MQ=255)
aGGCAGTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGATTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGa > 1:6400932/1‑93 (MQ=255)
aGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGa > 2:5620239/1‑93 (MQ=255)
aGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGa < 1:3923805/93‑1 (MQ=255)
ggCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGAt < 2:58166/93‑1 (MQ=255)
ggCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGAt < 2:3272007/93‑1 (MQ=255)
cACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATgc < 1:3131252/93‑1 (MQ=255)
aCTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATgcg > 2:646848/1‑93 (MQ=255)
aCTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATgcg > 2:2251280/1‑93 (MQ=255)
ttCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCt < 2:2696603/93‑1 (MQ=255)
tCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTa > 1:6142801/1‑93 (MQ=255)
tCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTa > 2:2578139/1‑93 (MQ=255)
tCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTa > 1:6191324/1‑93 (MQ=255)
cacaTTTTTTCGGATTATTGCAAATGAGGATAAAAAAGCCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTAc < 1:2249023/93‑1 (MQ=255)
acaTTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACg > 2:5413509/1‑93 (MQ=255)
caTTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGc > 2:6537770/1‑93 (MQ=255)
ttttttCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCtt < 2:6005046/93‑1 (MQ=255)
tttttCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTa < 1:3689844/93‑1 (MQ=255)
cGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAgg < 2:4114853/93‑1 (MQ=255)
ggATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGc > 2:2395805/1‑93 (MQ=255)
gATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGcc < 1:969850/93‑1 (MQ=255)
gATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGcc > 2:3853471/1‑93 (MQ=255)
gATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGcc < 2:4800837/93‑1 (MQ=255)
attattGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCt < 2:5031550/93‑1 (MQ=255)
ttattGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTa < 1:3909576/93‑1 (MQ=255)
tattGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTAc < 2:535489/93‑1 (MQ=255)
attGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACa > 1:4984886/1‑93 (MQ=255)
attGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACa > 2:2067464/1‑93 (MQ=255)
attGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACa < 2:4368960/93‑1 (MQ=255)
attGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACa > 1:687179/1‑93 (MQ=255)
ttGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACAt > 2:903742/1‑93 (MQ=255)
ttGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACAt < 2:3995162/93‑1 (MQ=255)
gCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACAttt < 1:2978573/93‑1 (MQ=255)
cAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTc > 1:3754590/1‑93 (MQ=255)
aaaTGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTcc < 1:4224836/93‑1 (MQ=255)
aaaTGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTcc > 2:2539488/1‑93 (MQ=255)
gAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGc > 2:5594966/1‑93 (MQ=255)
aGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCa > 2:1795559/1‑93 (MQ=255)
aGGATAAAAAAACCGGGTTTCCCCGGGTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCa > 2:3072588/1‑93 (MQ=255)
aTAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAata > 2:5188198/1‑93 (MQ=255)
aTAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAata < 1:1063587/93‑1 (MQ=255)
aTAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAata < 1:2577895/93‑1 (MQ=255)
tAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAatat < 2:1280885/93‑1 (MQ=255)
aaaaaaaCCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATAtg > 1:5065902/1‑93 (MQ=255)
aaaaaaCCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATAtgt > 1:1365422/1‑93 (MQ=255)
aaaaaaCCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATAtgt > 2:425588/1‑93 (MQ=255)
aaaaaaCCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATAtgt > 1:1424886/1‑93 (MQ=255)
aaaaaaCCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATAtgt < 1:5287845/93‑1 (MQ=255)
aaaaCCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGc > 1:756769/1‑93 (MQ=255)
aaaCCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCa > 2:391192/1‑93 (MQ=255)
aaaCCGGGCTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCa > 1:6608090/1‑93 (MQ=255)
aaCCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCAt > 2:3194883/1‑93 (MQ=255)
ccGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTa > 1:2728814/1‑93 (MQ=255)
cGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTAc < 2:4089413/93‑1 (MQ=255)
ggTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTCCTTGCAATATGTGCATTACtt > 2:4098823/1‑93 (MQ=255)
ggTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACtt > 2:5890315/1‑93 (MQ=255)
ggTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACtt > 2:756765/1‑93 (MQ=255)
gTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACttt < 1:4691647/93‑1 (MQ=255)
gTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACttt > 1:2858738/1‑93 (MQ=255)
gTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACttt < 2:112792/93‑1 (MQ=255)
tttCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTg > 1:4395144/1‑93 (MQ=255)
tttCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTg < 1:2781639/93‑1 (MQ=255)
ttccccg‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGt < 1:2006363/90‑1 (MQ=255)
tCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTa > 2:1365911/1‑93 (MQ=255)
tCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTa > 1:3444246/1‑93 (MQ=255)
ccccg‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAg > 1:5525307/2‑93 (MQ=255)
ccccg‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAg < 1:2185746/92‑1 (MQ=255)
ccccg‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAg < 2:6412785/92‑1 (MQ=255)
ccccg‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAg > 2:6442365/2‑93 (MQ=255)
cccg‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAgg < 1:427757/93‑1 (MQ=255)
|
AAGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGG > NC_000913/3510028‑3510209
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑C‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGA > NC_000913/3510028‑3510214
|
AAGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑C‑G < SRR4302536.1259600/94‑1 (MQ=60)
AAGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑C‑G > SRR4302536.4655189/1‑94 (MQ=60)
AAGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑C‑G > SRR4302536.1653367/1‑94 (MQ=60)
AAGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑C‑G < SRR4302536.6841127/94‑1 (MQ=60)
AGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑C‑GG < SRR4302536.4735765/94‑1 (MQ=60)
AGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑C‑GG > SRR4302536.946869/1‑94 (MQ=60)
ATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑C‑GGTT > SRR4302536.5187061/1‑94 (MQ=60)
ATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑C‑GGTT > SRR4302536.1273379/1‑94 (MQ=60)
ATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑C‑GGTT > SRR4302536.2295445/1‑94 (MQ=60)
ATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑C‑GGTT > SRR4302536.4179944/1‑94 (MQ=60)
ATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑C‑GGTT > SRR4302536.1882468/1‑94 (MQ=60)
TAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTGCCC‑G‑GTTT < SRR4302536.1911289/94‑1 (MQ=60)
TAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTT < SRR4302536.1530225/94‑1 (MQ=60)
AAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTC > SRR4302536.3946274/1‑94 (MQ=60)
AAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTC > SRR4302536.973294/1‑94 (MQ=60)
AGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCA > SRR4302536.16986/1‑94 (MQ=60)
AGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCA > SRR4302536.4026071/1‑94 (MQ=60)
CGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAG > SRR4302536.2838626/1‑94 (MQ=60)
GCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGT > SRR4302536.4824428/1‑94 (MQ=60)
GCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGT > SRR4302536.2956554/1‑94 (MQ=60)
CAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTG > SRR4302536.705672/1‑94 (MQ=60)
CAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTG > SRR4302536.1660026/1‑94 (MQ=60)
CAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTG > SRR4302536.5566515/1‑94 (MQ=60)
GGGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGAT < SRR4302536.5514623/94‑1 (MQ=60)
GCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGAT < SRR4302536.144837/94‑1 (MQ=60)
GAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAA > SRR4302536.2781998/1‑94 (MQ=60)
GAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAA < SRR4302536.5205453/94‑1 (MQ=60)
AGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAA < SRR4302536.1868324/94‑1 (MQ=60)
TGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGC > SRR4302536.2997520/1‑94 (MQ=60)
TGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAA > SRR4302536.4482885/1‑94 (MQ=60)
TGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAA > SRR4302536.521483/1‑94 (MQ=60)
GGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAA > SRR4302536.2502929/1‑94 (MQ=60)
GAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAA > SRR4302536.6861064/1‑94 (MQ=60)
GAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAA > SRR4302536.6815099/1‑94 (MQ=60)
AACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATT > SRR4302536.5794967/1‑94 (MQ=60)
ACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTG < SRR4302536.5061383/94‑1 (MQ=60)
ACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTG < SRR4302536.6053999/94‑1 (MQ=60)
CGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGC > SRR4302536.643586/1‑94 (MQ=60)
CGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGC < SRR4302536.595796/94‑1 (MQ=60)
GGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCC < SRR4302536.3071869/94‑1 (MQ=60)
GGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCC < SRR4302536.1343660/94‑1 (MQ=60)
GGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCC < SRR4302536.4598590/94‑1 (MQ=60)
GAGGCAGTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGATT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGA > SRR4302536.6591980/1‑94 (MQ=60)
GAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGA > SRR4302536.3901341/1‑94 (MQ=60)
AGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGAT < SRR4302536.2401342/94‑1 (MQ=60)
AGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGAT < SRR4302536.4040407/94‑1 (MQ=60)
AGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGAT > SRR4302536.5937405/1‑94 (MQ=60)
GGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATG < SRR4302536.1007632/94‑1 (MQ=60)
CACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCG < SRR4302536.3222809/94‑1 (MQ=60)
CTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCT > SRR4302536.6446557/1‑94 (MQ=60)
TTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTA > SRR4302536.6325846/1‑94 (MQ=60)
TTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTA > SRR4302536.6375751/1‑94 (MQ=60)
CACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAGCCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACG < SRR4302536.2317106/94‑1 (MQ=60)
CATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCT < SRR4302536.1980972/94‑1 (MQ=60)
ATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGactactggggtaagcct > SRR4302536.2368971/1‑77 (MQ=60)
ATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTT > SRR4302536.277202/1‑94 (MQ=60)
TTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTA > SRR4302536.5264692/1‑94 (MQ=60)
TTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTA > SRR4302536.2883952/1‑94 (MQ=60)
TTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTAT < SRR4302536.3800198/94‑1 (MQ=60)
TTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTAT < SRR4302536.899814/94‑1 (MQ=60)
TTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATC > SRR4302536.6305656/1‑94 (MQ=60)
TTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCA > SRR4302536.1502373/1‑94 (MQ=60)
CGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGC < SRR4302536.2097840/94‑1 (MQ=60)
GATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCT < SRR4302536.998472/94‑1 (MQ=60)
GATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCT < SRR4302536.4125510/94‑1 (MQ=60)
ATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTA > SRR4302536.5989855/1‑94 (MQ=60)
TTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTCTCAGGCCTAC > SRR4302536.6239484/1‑94 (MQ=60)
TTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTAC < SRR4302536.4025792/94‑1 (MQ=60)
TTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTAC > SRR4302536.1962898/1‑94 (MQ=60)
TATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACA > SRR4302536.5134564/1‑94 (MQ=60)
TATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACA < SRR4302536.5232620/94‑1 (MQ=60)
TATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACA > SRR4302536.2309521/1‑94 (MQ=60)
TATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACA > SRR4302536.707296/1‑94 (MQ=60)
TATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACA < SRR4302536.4401322/94‑1 (MQ=60)
ATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACAT < SRR4302536.3977161/94‑1 (MQ=60)
ATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACAT > SRR4302536.734445/1‑94 (MQ=60)
TTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATT < SRR4302536.679644/94‑1 (MQ=60)
TGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTATGCTTATCAGGCCTACATTT > SRR4302536.3018419/1‑94 (MQ=60)
TGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTT > SRR4302536.5594239/1‑94 (MQ=60)
GCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTC < SRR4302536.3066244/94‑1 (MQ=60)
GCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTC > SRR4302536.3866759/1‑94 (MQ=60)
CAAATGAGAATAAAAAAACGGGGTTT‑CCCGG‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCC < SRR4302536.4118183/94‑1 (MQ=60)
AAATGAGGATAAAAACACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCT > SRR4302536.2879707/1‑94 (MQ=60)
AAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCT < SRR4302536.4317812/94‑1 (MQ=60)
AAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCT < SRR4302536.4350543/94‑1 (MQ=60)
AAATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCT < SRR4302536.3164859/94‑1 (MQ=60)
AATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTT < SRR4302536.1904031/94‑1 (MQ=60)
AATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTT < SRR4302536.3819992/94‑1 (MQ=60)
ATGAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTG > SRR4302536.3891166/1‑94 (MQ=60)
GAGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCA > SRR4302536.6870751/1‑94 (MQ=60)
TGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAA > SRR4302536.1428349/1‑94 (MQ=60)
AGGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTTGCAA > SRR4302536.20647/1‑94 (MQ=60)
GGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAAT < SRR4302536.256911/94‑1 (MQ=60)
GGATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAAT > SRR4302536.986849/1‑94 (MQ=60)
GATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATA > SRR4302536.6340489/1‑94 (MQ=60)
ATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATAT < SRR4302536.2655394/94‑1 (MQ=60)
ATAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATAT < SRR4302536.1095401/94‑1 (MQ=60)
TAAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATG > SRR4302536.5217617/1‑94 (MQ=60)
AAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGT > SRR4302536.1537793/1‑94 (MQ=60)
AAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGT > SRR4302536.5488724/1‑94 (MQ=60)
AAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGT > SRR4302536.1467220/1‑94 (MQ=60)
AAAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGT > SRR4302536.1406119/1‑94 (MQ=60)
AAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTG > SRR4302536.6844563/1‑94 (MQ=60)
AAAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTG < SRR4302536.5445496/94‑1 (MQ=60)
AAAAAACCGGGTTT‑CCC‑CGGTTGCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTG < SRR4302536.6847710/94‑1 (MQ=60)
AAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGC > SRR4302536.778966/1‑94 (MQ=60)
AAAAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGC > SRR4302536.2979751/1‑94 (MQ=60)
AAAACCGGGCTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCA > SRR4302536.6804592/1‑94 (MQ=60)
AAACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCACGCCTACATTTCCTTGCAATATGTGCAT > SRR4302536.6040014/1‑94 (MQ=60)
AACCGGGTTT‑CCC‑CGGATTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTTCATT > SRR4302536.442106/1‑94 (MQ=60)
ACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTA > SRR4302536.2810165/1‑94 (MQ=60)
ACCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTA < SRR4302536.2575159/94‑1 (MQ=60)
CCGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTAC > SRR4302536.4899437/1‑94 (MQ=60)
CGGGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACT < SRR4302536.339061/94‑1 (MQ=60)
GGGTTT‑CCCAG‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTT > SRR4302536.3737754/1‑94 (MQ=60)
GGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTT > SRR4302536.4208568/1‑94 (MQ=60)
GGTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTT > SRR4302536.2943241/1‑94 (MQ=60)
GTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTG < SRR4302536.4832722/94‑1 (MQ=60)
GTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTG > SRR4302536.4526443/1‑94 (MQ=60)
GTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTG > SRR4302536.470066/1‑94 (MQ=60)
GTTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTG < SRR4302536.3725281/94‑1 (MQ=60)
TTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGT > SRR4302536.6631410/1‑94 (MQ=60)
TTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGT > SRR4302536.1397430/1‑94 (MQ=60)
TTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGT > SRR4302536.5291991/1‑94 (MQ=60)
TTT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGT < SRR4302536.2864276/94‑1 (MQ=60)
TT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTA < SRR4302536.2066737/94‑1 (MQ=60)
TT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTA < SRR4302536.45482/94‑1 (MQ=60)
TT‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTA > SRR4302536.3546815/1‑94 (MQ=60)
T‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAG < SRR4302536.400853/94‑1 (MQ=60)
T‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAG > SRR4302536.5690061/1‑94 (MQ=60)
T‑CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAG < SRR4302536.943848/94‑1 (MQ=60)
CCC‑G‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGC < SRR4302536.4695521/94‑1 (MQ=60)
CCC‑G‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGC > SRR4302536.4697997/1‑94 (MQ=60)
CCC‑G‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGC > SRR4302536.4418366/1‑94 (MQ=60)
CCC‑G‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGC < SRR4302536.439018/94‑1 (MQ=60)
CCC‑G‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGC > SRR4302536.527493/1‑94 (MQ=60)
CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGG > SRR4302536.3419584/1‑94 (MQ=60)
CCC‑CGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGG < SRR4302536.2251635/94‑1 (MQ=60)
CC‑G‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCC > SRR4302536.1727026/1‑94 (MQ=60)
C‑G‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCG > SRR4302536.3316817/1‑94 (MQ=60)
C‑G‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCG < SRR4302536.5841810/94‑1 (MQ=60)
C‑G‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCG < SRR4302536.1632971/94‑1 (MQ=60)
G‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGG < SRR4302536.6696755/94‑1 (MQ=60)
GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGA > SRR4302536.6306924/1‑94 (MQ=60)
GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGA < SRR4302536.4950756/94‑1 (MQ=60)
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AAGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCC‑C‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGA > NC_000913/3510028‑3510214
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
