Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I2 R1	1475	266.7	13469680	98.2%	13227225	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,539,774	G→A	A578T (GCC→ACC)	feoB →	ferrous iron transport protein B

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,539,774	0	G	A	100.0%	1022.1 / NA	280	A578T (GCC→ACC)	feoB	ferrous iron transport protein B
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (139/141); total (139/141)

Only 100 of 289 total aligned reads displayed.

GCGTCCGTCAGCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTGCCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCCGGCAGAATTT  >  NC_000913/3539684‑3539863

  gtccgtcAGCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCAt                                                                                       >  2:4113417/1‑93 (MQ=255)

   tccgtcAGCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATg                                                                                      >  1:1136906/1‑93 (MQ=255)

      gtcAGCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCg                                                                                   <  1:32940/93‑1 (MQ=255)

      gtcACCCGGGTGATCGCCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCg                                                                                   <  1:3257893/93‑1 (MQ=255)

         aGCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGaaa                                                                                <  1:2309522/93‑1 (MQ=255)

         aGCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGaaa                                                                                <  2:3353930/93‑1 (MQ=255)

          gCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGCaag                                                                               >  2:1640696/1‑93 (MQ=255)

          gCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAaag                                                                               >  2:5658522/1‑93 (MQ=255)

           ccGGGTAATCACCACGGCCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAaaga                                                                              <  1:5105491/93‑1 (MQ=255)

            cGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAaagaa                                                                             <  2:132963/93‑1 (MQ=255)

             gggTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAaagaag                                                                            <  2:1987688/93‑1 (MQ=255)

             gggTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAaagaag                                                                            <  1:1405822/93‑1 (MQ=255)

              ggTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAaagaagg                                                                           >  2:741916/1‑92 (MQ=255)

              ggTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGt                                                                           <  2:221907/93‑1 (MQ=255)

              ggTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGt                                                                           <  1:1622539/93‑1 (MQ=255)

              ggTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGt                                                                           >  1:2392575/1‑93 (MQ=255)

              ggTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGt                                                                           <  2:4710819/93‑1 (MQ=255)

              ggTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGt                                                                           >  2:5794981/1‑93 (MQ=255)

                   tCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAg                                                                      >  2:5714101/1‑93 (MQ=255)

                    cACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGt                                                                     <  1:2130762/93‑1 (MQ=255)

                     aCCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTg                                                                    >  2:2466253/1‑93 (MQ=255)

                     aCCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTg                                                                    >  2:1847936/1‑93 (MQ=255)

                        ccGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGt                                                                 <  2:4940561/93‑1 (MQ=255)

                         cGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTa                                                                >  1:2683577/1‑93 (MQ=255)

                         cGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTa                                                                <  1:5883290/93‑1 (MQ=255)

                         cGGTCTTAAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTa                                                                <  1:194464/93‑1 (MQ=255)

                            tCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGc                                                             <  1:5742890/93‑1 (MQ=255)

                             cTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCt                                                            <  1:4002820/93‑1 (MQ=255)

                               tCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCa                                                          <  1:2274898/93‑1 (MQ=255)

                                 aaGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAac                                                        >  2:1735218/1‑93 (MQ=255)

                                     cAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACAccc                                                    <  2:5141755/93‑1 (MQ=255)

                                     cAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACAccc                                                    >  2:855653/1‑93 (MQ=255)

                                     cAATTGGAGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACAccc                                                    <  1:5286311/93‑1 (MQ=255)

                                      aaTTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTCCGCTCAACAACct                                                   >  1:1535952/1‑93 (MQ=255)

                                      aaTTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCct                                                   >  1:678923/1‑93 (MQ=255)

                                      aaTTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCct                                                   <  2:115307/93‑1 (MQ=255)

                                       aTTGGTGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCctc                                                  >  2:36481/1‑93 (MQ=255)

                                       aTTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCctc                                                  <  2:4433944/93‑1 (MQ=255)

                                       aTTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCctc                                                  <  2:4877890/93‑1 (MQ=255)

                                       aTTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCctc                                                  >  1:3866415/1‑93 (MQ=255)

                                        ttGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCctct                                                 >  1:4797114/1‑93 (MQ=255)

                                        ttGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCctct                                                 >  1:5970839/1‑93 (MQ=255)

                                          ggCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTac                                               <  1:3558969/93‑1 (MQ=255)

                                           gCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTaca                                              >  2:3974979/1‑93 (MQ=255)

                                             gTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACAcc                                            <  1:268028/93‑1 (MQ=255)

                                               gCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGc                                          >  2:3687453/1‑93 (MQ=255)

                                                cATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCa                                         <  2:4659434/93‑1 (MQ=255)

                                                cATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCATCTACACCGCa                                         >  1:280354/1‑93 (MQ=255)

                                                 aTGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAg                                        <  2:4310521/93‑1 (MQ=255)

                                                 aTGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAg                                        >  2:610532/1‑93 (MQ=255)

                                                   gAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGaa                                      >  1:1128010/1‑93 (MQ=255)

                                                   gAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGaa                                      <  2:3119955/93‑1 (MQ=255)

                                                    aaGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGaaa                                     >  2:6434679/1‑93 (MQ=255)

                                                    aaGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGaaa                                     >  2:6263360/1‑93 (MQ=255)

                                                    aaGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGaaa                                     <  1:5205711/93‑1 (MQ=255)

                                                    aaGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGaaa                                     >  1:4686279/1‑93 (MQ=255)

                                                     aGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGaaaa                                    >  1:2086167/1‑93 (MQ=255)

                                                     aGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGaaaa                                    <  2:3585586/93‑1 (MQ=255)

                                                     aGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGaaaa                                    >  1:2929927/1‑93 (MQ=255)

                                                      gATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAat                                   >  2:938027/1‑93 (MQ=255)

                                                      gATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAat                                   <  1:749589/93‑1 (MQ=255)

                                                      gATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAat                                   <  1:5938065/93‑1 (MQ=255)

                                                         aaCTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATAtt                                <  1:4115885/93‑1 (MQ=255)

                                                          aCTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTc                               >  2:3003916/1‑93 (MQ=255)

                                                           cTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCa                              >  2:5982629/1‑93 (MQ=255)

                                                            tGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAg                             <  2:1066614/93‑1 (MQ=255)

                                                            tGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAg                             >  1:3152469/1‑93 (MQ=255)

                                                            tGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAg                             >  1:2183646/1‑93 (MQ=255)

                                                             ggcaggcaACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAgg                            >  1:1728355/1‑93 (MQ=255)

                                                             ggcaggcaACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAgg                            >  1:4408494/1‑93 (MQ=255)

                                                             ggcaggcaACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAgg                            >  2:1425206/1‑93 (MQ=255)

                                                              gcaggcaACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGa                           >  1:6602082/1‑93 (MQ=255)

                                                                  gcaACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACgca                       >  2:2805434/1‑91 (MQ=255)

                                                                   caACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAag                      <  2:5493054/93‑1 (MQ=255)

                                                                    aaCGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAaga                     <  2:376557/93‑1 (MQ=255)

                                                                    aaCGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAaga                     <  1:5536098/93‑1 (MQ=255)

                                                                    aaCGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAaga                     <  1:4227996/93‑1 (MQ=255)

                                                                     aCGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAagag                    <  1:5671099/93‑1 (MQ=255)

                                                                     aCGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAagag                    <  1:2530212/93‑1 (MQ=255)

                                                                     aCGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAagag                    >  1:3702606/1‑93 (MQ=255)

                                                                     aCGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAagag                    <  1:3938469/93‑1 (MQ=255)

                                                                      cGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGt                   <  1:3801499/93‑1 (MQ=255)

                                                                      cGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGt                   <  2:2722648/93‑1 (MQ=255)

                                                                       ggTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGtt                  >  1:6316371/1‑93 (MQ=255)

                                                                           ggCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAAt              <  1:3083906/93‑1 (MQ=255)

                                                                            gCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATc             <  1:124984/93‑1 (MQ=255)

                                                                            gCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATc             <  1:820158/93‑1 (MQ=255)

                                                                             ccTGTTTACAGGTACCTTGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCTTGTAGACCGGAGCACATAGTCAGGAAGCGGAGTTCCATcg            >  1:4723881/1‑92 (MQ=255)

                                                                             ccTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATcc            >  2:5402732/1‑93 (MQ=255)

                                                                             ccTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATcc            >  2:5030588/1‑93 (MQ=255)

                                                                             ccTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATcc            >  1:653627/1‑93 (MQ=255)

                                                                               tGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCCgg          >  1:4552711/1‑93 (MQ=255)

                                                                               tGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCCgg          >  2:2331501/1‑93 (MQ=255)

                                                                                gTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCCGGc         <  1:4949649/93‑1 (MQ=255)

                                                                                   tACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCCGGCAGa      >  2:5608692/1‑93 (MQ=255)

                                                                                   tACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCAGGCAGa      >  2:3207396/1‑93 (MQ=255)

                                                                                   tACAGGTACCATGGCGAAAGAAGTGGCAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCCGGCAGa      >  1:1027148/1‑93 (MQ=255)

                                                                                    aCAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCCGGCAGaa     <  1:5989253/93‑1 (MQ=255)

                                                                                    aCAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCCGGCAGaa     <  1:6155006/93‑1 (MQ=255)

                                                                                      aGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCCGGCAGAAtt   <  2:3495398/93‑1 (MQ=255)

GCGTCCGTCAGCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTGCCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCCGGCAGAATTT  >  NC_000913/3539684‑3539863

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CTGGCGTCCGTCAGCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTGCCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCCGGCAGAATTTAACC  >  NC_000913/3539681‑3539867

CTGGCGTCCGTCAGCCGGGTGATCACCCCGTTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTA                                                                                               <  SRR4302536.1327057/94‑1 (MQ=60)

CTGGCGTCCGTCAGCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTA                                                                                               >  SRR4302536.3233812/1‑94 (MQ=60)

 TGGCGTCCGTCAGCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTAC                                                                                              >  SRR4302536.3625671/1‑94 (MQ=60)

 TGGCGTCCGTCAGCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTAC                                                                                              >  SRR4302536.3715819/1‑94 (MQ=60)

 TGGCGTCCGTCAGCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTAC                                                                                              >  SRR4302536.4845182/1‑94 (MQ=60)

 TGGCGTCCGTCAGCCGGGTGATCACCCCGGACTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTAC                                                                                              >  SRR4302536.4428894/1‑94 (MQ=60)

  GGCGTCCGTCAGCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACC                                                                                             >  SRR4302536.6736180/1‑94 (MQ=60)

   GCGTCCGTCAGCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCA                                                                                            <  SRR4302536.2321745/94‑1 (MQ=60)

    CGTCCGTCAGCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCAT                                                                                           <  SRR4302536.1371962/94‑1 (MQ=60)

     GTCCGTCAGCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATG                                                                                          >  SRR4302536.1171084/1‑94 (MQ=60)

     GTCCGTCAGCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATG                                                                                          <  SRR4302536.5918895/94‑1 (MQ=60)

     GTCCGTCAGCCGGGAGATCACCCCGGTCTTCACGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATG                                                                                          >  SRR4302536.4023647/1‑94 (MQ=60)

     CTCCGTCAGCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATG                                                                                          <  SRR4302536.2565261/94‑1 (MQ=60)

      cccgcCAGCCGGGTGAGCAGCCCGGCCTCCAACCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGCTACCATGG                                                                                         <  SRR4302536.4952855/89‑1 (MQ=60)

       CCGTCAGCCGGGGGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGC                                                                                        >  SRR4302536.2733760/1‑94 (MQ=60)

        CGTCAGCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCG                                                                                       <  SRR4302536.1103834/94‑1 (MQ=60)

        CGTCAGCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGGTGGCCTGTTTACAGGTAGCATGGCG                                                                                       >  SRR4302536.4896223/1‑94 (MQ=60)

         GTCAGCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGA                                                                                      >  SRR4302536.275190/1‑94 (MQ=60)

         GTCAGCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGA                                                                                      <  SRR4302536.33850/94‑1 (MQ=60)

         GTCACCCGGGTGATCGCCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGA                                                                                      <  SRR4302536.3353386/94‑1 (MQ=60)

          TCAGCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAA                                                                                     >  SRR4302536.3442997/1‑94 (MQ=60)

            AGCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGGGCGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAG                                                                                   >  SRR4302536.2114948/1‑94 (MQ=60)

            AGCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAG                                                                                   <  SRR4302536.2379619/94‑1 (MQ=60)

            AGCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAG                                                                                   >  SRR4302536.484358/1‑94 (MQ=60)

            AGCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAG                                                                                   <  SRR4302536.4861736/94‑1 (MQ=60)

            AGCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAG                                                                                   >  SRR4302536.4495300/1‑94 (MQ=60)

             GCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGA                                                                                  >  SRR4302536.6147954/1‑94 (MQ=60)

              CCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAA                                                                                 <  SRR4302536.1161949/94‑1 (MQ=60)

              CCGGGTAATCACCACGGCCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAA                                                                                 <  SRR4302536.5258098/94‑1 (MQ=60)

                GGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGT                                                                               <  SRR4302536.1447636/94‑1 (MQ=60)

                GGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGT                                                                               <  SRR4302536.3219515/94‑1 (MQ=60)

                GGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGT                                                                               >  SRR4302536.2465005/1‑94 (MQ=60)

                 GGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTG                                                                              >  SRR4302536.1964445/1‑94 (MQ=60)

                 GGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTG                                                                              <  SRR4302536.1669795/94‑1 (MQ=60)

                  GTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGG                                                                             <  SRR4302536.3818899/94‑1 (MQ=60)

                   TGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGT                                                                            >  SRR4302536.2729390/1‑94 (MQ=60)

                     ATCACCCCGGTCTTCAAGCCTATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAG                                                                          >  SRR4302536.6739640/1‑94 (MQ=60)

                     ATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAG                                                                          >  SRR4302536.2408169/1‑94 (MQ=60)

                       CACCCCGGTTTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTG                                                                        <  SRR4302536.2194729/94‑1 (MQ=60)

                       CACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTG                                                                        >  SRR4302536.935963/1‑94 (MQ=60)

                       CACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTG                                                                        <  SRR4302536.2194730/94‑1 (MQ=60)

                          CCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGT                                                                     >  SRR4302536.4291881/1‑94 (MQ=60)

                           CCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCTTGGCGAAAGAAGTGGTAGTGGGTA                                                                    <  SRR4302536.2903106/94‑1 (MQ=60)

                           CCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTA                                                                    >  SRR4302536.2763746/1‑94 (MQ=60)

                           CCGGTCTTCAAACCAATTGGCGTGCATGAAGGTAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTA                                                                    <  SRR4302536.125564/94‑1 (MQ=60)

                            CGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTAC                                                                   <  SRR4302536.429711/94‑1 (MQ=60)

                            CGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTAC                                                                   <  SRR4302536.6009188/94‑1 (MQ=60)

                            CGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTAC                                                                   <  SRR4302536.6058531/94‑1 (MQ=60)

                            CGGTCTTAAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTAC                                                                   <  SRR4302536.199580/94‑1 (MQ=60)

                             GGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACG                                                                  >  SRR4302536.5387827/1‑94 (MQ=60)

                             GGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACG                                                                  <  SRR4302536.1746688/94‑1 (MQ=60)

                             GGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACG                                                                  >  SRR4302536.6826708/1‑94 (MQ=60)

                             GGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACG                                                                  <  SRR4302536.5178740/94‑1 (MQ=60)

                               TCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCT                                                                >  SRR4302536.6563081/1‑94 (MQ=60)

                               TCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCT                                                                <  SRR4302536.5913724/94‑1 (MQ=60)

                               TCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCT                                                                <  SRR4302536.1431895/94‑1 (MQ=60)

                                CTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTC                                                               <  SRR4302536.4121592/94‑1 (MQ=60)

                                 TTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCA                                                              <  SRR4302536.3897805/94‑1 (MQ=60)

                                  TCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAA                                                             <  SRR4302536.2343833/94‑1 (MQ=60)

                                   CAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAAC                                                            >  SRR4302536.6310679/1‑94 (MQ=60)

                                   CAAGCCAATTGGCGTGCATGAAGATAACT‑GCAGGCAACGGTTGGCCTGTTTAAAGGGACCATGGCGGAAAAAGAGGTAGTGGGTAGCCTCAACA                                                           >  SRR4302536.6046616/1‑94 (MQ=50)

                                    AAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACA                                                           <  SRR4302536.3058120/94‑1 (MQ=60)

                                     AGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACAC                                                          <  SRR4302536.6601102/94‑1 (MQ=60)

                                      GCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACC                                                         <  SRR4302536.273403/94‑1 (MQ=60)

                                       CCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCC                                                        >  SRR4302536.5433800/1‑94 (MQ=60)

                                        CAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTCCGCTCAACAACCT                                                       >  SRR4302536.1581135/1‑94 (MQ=60)

                                        CAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACTCT                                                       >  SRR4302536.4911589/1‑94 (MQ=60)

                                        CAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCT                                                       >  SRR4302536.6150887/1‑94 (MQ=60)

                                        CAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCT                                                       >  SRR4302536.698812/1‑94 (MQ=60)

                                        CAATTGGAGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCT                                                       <  SRR4302536.5443910/94‑1 (MQ=60)

                                         AATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTC                                                      <  SRR4302536.67977/94‑1 (MQ=60)

                                         AATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTC                                                      <  SRR4302536.5334754/94‑1 (MQ=60)

                                         AATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTC                                                      >  SRR4302536.5296389/1‑94 (MQ=60)

                                         AATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTC                                                      >  SRR4302536.3981465/1‑94 (MQ=60)

                                          ATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCT                                                     <  SRR4302536.719844/94‑1 (MQ=60)

                                          ATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCT                                                     >  SRR4302536.6148809/1‑94 (MQ=60)

                                          ATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCT                                                     >  SRR4302536.4941495/1‑94 (MQ=60)

                                          ATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCT                                                     >  SRR4302536.3232083/1‑94 (MQ=60)

                                           TTCGCGTCCATGAAGATAACTGGCAGGCGACGTTTTGCCAGTTTACAGTTACCGTGGCGAAAGAAGTGGTAGTGGGTACCCTCAACACCCTTTA                                                    <  SRR4302536.5254872/94‑1 (MQ=40)

                                             GGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACA                                                  <  SRR4302536.3665386/94‑1 (MQ=60)

                                               CGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGCGGCAGTGGGTACGCTCAACACCCTCTACACG                                                >  SRR4302536.2761793/1‑94 (MQ=60)

                                                GTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCG                                               <  SRR4302536.275173/94‑1 (MQ=60)

                                                GTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCG                                               >  SRR4302536.1539003/1‑94 (MQ=60)

                                                  GCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCATCTACACCGCA                                             >  SRR4302536.287815/1‑94 (MQ=60)

                                                   GATGAAGATAACTGGCAGGCAACGGTTGGCGTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAG                                            <  SRR4302536.809000/94‑1 (MQ=60)

                                                   GATGAAAATAACTGGCAGGCAACTGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGAACGCTCAACACCCTCTACACCGCAG                                            >  SRR4302536.2063744/1‑94 (MQ=60)

                                                     TGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAA                                          >  SRR4302536.1161918/1‑94 (MQ=60)

                                                      GAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCTTCTACACCGCAGAAA                                         <  SRR4302536.1517661/94‑1 (MQ=60)

                                                      GAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAA                                         >  SRR4302536.4827203/1‑94 (MQ=60)

                                                       AAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAA                                        >  SRR4302536.2148964/1‑94 (MQ=60)

                                                       AAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAA                                        >  SRR4302536.5613177/1‑94 (MQ=60)

                                                       AAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAA                                        >  SRR4302536.3016383/1‑94 (MQ=60)

                                                       AAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAA                                        >  SRR4302536.2379473/1‑94 (MQ=60)

                                                       AAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAA                                        <  SRR4302536.5360887/94‑1 (MQ=60)

                                                       AAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCCCAGCAAA                                        >  SRR4302536.2327665/1‑94 (MQ=60)

                                                       AAGATAACTGGCAGGCAACGGCTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAA                                        <  SRR4302536.3379838/94‑1 (MQ=60)

                                                        AGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAAT                                       <  SRR4302536.2365264/94‑1 (MQ=60)

                                                         GATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCCGAAACTA                                      >  SRR4302536.3268554/1‑94 (MQ=60)

                                                         GATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATA                                      <  SRR4302536.369930/94‑1 (MQ=60)

                                                         GATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATA                                      <  SRR4302536.771606/94‑1 (MQ=60)

                                                         GATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATA                                      >  SRR4302536.6077545/1‑94 (MQ=60)

                                                         GATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATA                                      <  SRR4302536.6114957/94‑1 (MQ=60)

                                                         GAGAACTGGCAGGCAACGGTTAGCCTGTTTGCAGGTTCCATGGCGAAAGAGGTGGTAGTGGGTACGCTCAACACCCTGTACACCGCAGAAAACA                                      <  SRR4302536.3298999/94‑1 (MQ=60)

                                                            AACTGGCAGGCAACGGTTTGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACCCCCTCTACACCGCAGAAAATATTC                                   <  SRR4302536.2351670/94‑1 (MQ=60)

                                                            AACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTC                                   <  SRR4302536.4237964/94‑1 (MQ=60)

                                                             ACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCA                                  >  SRR4302536.5860794/1‑94 (MQ=60)

                                                             ACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCA                                  >  SRR4302536.4479949/1‑94 (MQ=60)

                                                             ACTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCAAGGCGAAAGAAGTGGTAGTGGGTACGCTCAACCCCCTCTACACCGCAGAAAATATTCA                                  <  SRR4302536.2532156/94‑1 (MQ=60)

                                                              CTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAG                                 >  SRR4302536.3244792/1‑94 (MQ=60)

                                                              CTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAG                                 <  SRR4302536.5547003/94‑1 (MQ=60)

                                                              CTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAG                                 >  SRR4302536.2249475/1‑94 (MQ=60)

                                                              CTGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAG                                 <  SRR4302536.5789838/94‑1 (MQ=60)

                                                               TGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGG                                >  SRR4302536.2863999/1‑94 (MQ=60)

                                                               TGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGG                                >  SRR4302536.1778261/1‑94 (MQ=60)

                                                               TGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGG                                <  SRR4302536.1641168/94‑1 (MQ=60)

                                                               TGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGG                                <  SRR4302536.3974803/94‑1 (MQ=60)

                                                               TGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGG                                >  SRR4302536.4540364/1‑94 (MQ=60)

                                                               TGGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGG                                >  SRR4302536.4774476/1‑94 (MQ=60)

                                                                GGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGA                               >  SRR4302536.6152951/1‑94 (MQ=60)

                                                                GGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGA                               <  SRR4302536.750797/94‑1 (MQ=60)

                                                                GGCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGA                               >  SRR4302536.6798432/1‑94 (MQ=60)

                                                                 GCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGAC                              >  SRR4302536.1857382/1‑94 (MQ=60)

                                                                 GCAGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGAC                              >  SRR4302536.2209033/1‑94 (MQ=60)

                                                                 GCAGACAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGAC                              <  SRR4302536.1738913/94‑1 (MQ=60)

                                                                   AGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGA                            >  SRR4302536.6419976/1‑94 (MQ=60)

                                                                   AGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGA                            >  SRR4302536.4169450/1‑94 (MQ=60)

                                                                   AGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGA                            <  SRR4302536.838662/94‑1 (MQ=60)

                                                                   AGGCAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGA                            >  SRR4302536.309154/1‑94 (MQ=60)

                                                                     GCAACTGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAG                          <  SRR4302536.3935674/94‑1 (MQ=60)

                                                                      CAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGA                         <  SRR4302536.4094611/94‑1 (MQ=60)

                                                                      CAACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGGACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGA                         >  SRR4302536.328142/1‑94 (MQ=60)

                                                                       AACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGGTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAG                        >  SRR4302536.2828229/1‑94 (MQ=60)

                                                                       AACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAG                        <  SRR4302536.6318459/94‑1 (MQ=60)

                                                                       AACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAG                        <  SRR4302536.4353797/94‑1 (MQ=60)

                                                                       AACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAG                        <  SRR4302536.3407765/94‑1 (MQ=60)

                                                                       AACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAG                        <  SRR4302536.5701097/94‑1 (MQ=60)

                                                                       AACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAG                        >  SRR4302536.3813332/1‑94 (MQ=60)

                                                                        ACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGT                       >  SRR4302536.5734259/1‑94 (MQ=60)

                                                                        ACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGT                       <  SRR4302536.5839671/94‑1 (MQ=60)

                                                                        ACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGT                       <  SRR4302536.2606469/94‑1 (MQ=60)

                                                                        ACGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGT                       <  SRR4302536.4055486/94‑1 (MQ=60)

                                                                         CGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTT                      <  SRR4302536.3914850/94‑1 (MQ=60)

                                                                         CGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTT                      >  SRR4302536.6504524/1‑94 (MQ=60)

                                                                         CGGTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTT                      <  SRR4302536.3694575/94‑1 (MQ=60)

                                                                           GTTGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCA                    <  SRR4302536.243990/94‑1 (MQ=60)

                                                                             TGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAAT                  <  SRR4302536.470707/94‑1 (MQ=60)

                                                                             TGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAAT                  <  SRR4302536.5859915/94‑1 (MQ=60)

                                                                             TGGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAAT                  >  SRR4302536.3388876/1‑94 (MQ=60)

                                                                              GGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATC                 <  SRR4302536.3174127/94‑1 (MQ=60)

                                                                              GGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATC                 <  SRR4302536.1619244/94‑1 (MQ=60)

                                                                              GGCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATC                 >  SRR4302536.1170039/1‑94 (MQ=60)

                                                                               GCCTGTTTACAGGTACCTTGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCttgtagaccggagcacatagtcaggaagcggagttccatcg                >  SRR4302536.4866010/1‑53 (MQ=60)

                                                                               GCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCC                >  SRR4302536.672795/1‑94 (MQ=60)

                                                                               GCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCC                >  SRR4302536.4176862/1‑94 (MQ=60)

                                                                               GCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCC                <  SRR4302536.844299/94‑1 (MQ=60)

                                                                               GCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCC                <  SRR4302536.128279/94‑1 (MQ=60)

                                                                               GCCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCC                <  SRR4302536.5134359/94‑1 (MQ=60)

                                                                                CCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGGAGAGTTCAATCCG               >  SRR4302536.463873/1‑94 (MQ=60)

                                                                                CCTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCCG               <  SRR4302536.4110360/94‑1 (MQ=60)

                                                                                 CTGTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCCGG              >  SRR4302536.4689271/1‑94 (MQ=60)

                                                                                   GTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCCGGCA            <  SRR4302536.5098354/94‑1 (MQ=60)

                                                                                   GTTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCCGGCA            <  SRR4302536.2214566/94‑1 (MQ=60)

                                                                                    TTTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCCGGCAG           >  SRR4302536.1240876/1‑94 (MQ=60)

                                                                                     TTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCCGGCAGA          >  SRR4302536.6423374/1‑94 (MQ=60)

                                                                                     TTACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCCGGCAGA          <  SRR4302536.493211/94‑1 (MQ=60)

                                                                                     TTACAGGTACCATGGCGAAAGAAGTGGCAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCCGGCAGA          >  SRR4302536.1057576/1‑94 (MQ=60)

                                                                                       ACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCCGGCAGAAT        <  SRR4302536.6338377/94‑1 (MQ=60)

                                                                                       ACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCCGGCAGAAT        <  SRR4302536.6167815/94‑1 (MQ=60)

                                                                                       ACAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCCGGCAGAAT        <  SRR4302536.4675496/94‑1 (MQ=60)

                                                                                        CAGGTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCCGGCAGAATT       >  SRR4302536.6102503/1‑94 (MQ=60)

                                                                                           GTACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCCGGCAGAATTTAA    >  SRR4302536.4666056/1‑94 (MQ=60)

                                                                                            TACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCCGGCAGAATTTAAC   >  SRR4302536.214168/1‑94 (MQ=60)

                                                                                             ACCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCCGGCAGAATTTAACC  <  SRR4302536.3971942/94‑1 (MQ=60)

                                                                                             ACCATGGCAAAACAAGTGGTAGTGGTTACTCTCAACACCCTCTACACCGCAGAAAATATTCAGTACGAAGAGTTCAATCCGGCAGAATTTAACC  <  SRR4302536.3904420/94‑1 (MQ=60)

CTGGCGTCCGTCAGCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTGCCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCCGGCAGAATTTAACC  >  NC_000913/3539681‑3539867

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`