Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I2 R1 1475 266.7 13469680 98.2% 13227225 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,175,949 +G intergenic (+82/‑76) nusG → / → rplK NusG/50S ribosomal subunit protein L11

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,175,9471.G99.6% 799.4 / ‑5.7 246intergenic (+80/‑78)nusG/rplKNusG/50S ribosomal subunit protein L11
Reads supporting (aligned to +/- strand):  ref base . (0/1);  major base G (132/112);  minor base C (1/0);  total (133/113)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 271 total aligned reads displayed.

TGAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGA  >  NC_000913/4175855‑4176034
                                                                                              |                                                                                       
tGAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTAt                                                                                          <  1:1352452/93‑1 (MQ=255)
tGAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTAt                                                                                          <  1:2818497/93‑1 (MQ=255)
 gAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATg                                                                                        <  2:1462892/93‑1 (MQ=255)
 gAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATg                                                                                        <  2:4911149/93‑1 (MQ=255)
  aaaaaGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATgg                                                                                       <  1:4533554/93‑1 (MQ=255)
    aaaGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGTACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATgggc                                                                                     <  2:2925087/93‑3 (MQ=255)
      aGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATgggcct                                                                                   <  2:1951838/93‑5 (MQ=255)
      aGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATgggcct                                                                                   >  1:4091470/1‑89 (MQ=255)
         cTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACGATTTCGCGCCTTTTGTTTTTATGGGCCTTGc                                                                                 >  1:3076615/1‑93 (MQ=255)
         cTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGc                                                                                 >  2:1326697/1‑93 (MQ=255)
          tAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGcc                                                                                >  1:6296928/1‑93 (MQ=255)
           aaCCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGccc                                                                               >  1:5232265/1‑93 (MQ=255)
           aaCCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGccc                                                                               >  2:1500984/1‑93 (MQ=255)
            aCCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCg                                                                              >  2:4606618/1‑93 (MQ=255)
            aCCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCg                                                                              >  1:4445200/1‑93 (MQ=255)
            aCCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCg                                                                              >  1:5458696/1‑93 (MQ=255)
            aCCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCg                                                                              >  1:6222014/1‑93 (MQ=255)
              ccAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTa                                                                            >  1:5665773/1‑93 (MQ=255)
               cAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTaa                                                                           <  1:1487235/93‑1 (MQ=255)
                 gCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTaaaa                                                                         <  1:5933119/93‑1 (MQ=255)
                 gCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTaaaa                                                                         >  1:2867996/1‑93 (MQ=255)
                 gCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTaaaa                                                                         <  2:1021322/93‑1 (MQ=255)
                    aTCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGa                                                                      <  1:3016706/93‑1 (MQ=255)
                    aTCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGa                                                                      >  2:2593926/1‑93 (MQ=255)
                      taaaaaaGCGGCCATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGAtt                                                                    <  2:6261493/92‑1 (MQ=255)
                       aaaaaaGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTACAACGAttt                                                                   >  2:2332327/1‑93 (MQ=255)
                       aaaaaaGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGAttt                                                                   >  2:5813690/1‑93 (MQ=255)
                         aaaaGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGAttttt                                                                 >  1:5910498/1‑93 (MQ=255)
                         aaaaGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGAttttt                                                                 >  2:3345588/1‑93 (MQ=255)
                         aaaaGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGAttttt                                                                 >  2:3991654/1‑93 (MQ=255)
                          aaaGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGAtttttt                                                                >  1:5169706/1‑93 (MQ=255)
                          aaaGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGAtttttt                                                                >  1:4350004/1‑93 (MQ=255)
                           aaGCGTCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTta                                                               <  1:1759234/93‑1 (MQ=255)
                           aaGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTta                                                               <  1:705597/93‑1 (MQ=255)
                           aaGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTta                                                               >  1:2675479/1‑93 (MQ=255)
                            aGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTtat                                                              <  2:6596641/93‑1 (MQ=255)
                            aGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTtat                                                              >  2:4221672/1‑93 (MQ=255)
                            aGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTtat                                                              >  2:1550835/1‑93 (MQ=255)
                            aGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTtat                                                              >  2:5492471/1‑93 (MQ=255)
                             gcggcgATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTtata                                                             <  2:275178/93‑1 (MQ=255)
                              cggcgATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTatat                                                            >  2:1162728/1‑93 (MQ=255)
                                gcgATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCGGTAAAACGATTTTTTATATCa                                                          <  1:4243433/93‑1 (MQ=255)
                                gcgATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCa                                                          >  1:12360/1‑93 (MQ=255)
                                gcgATTTAATCGTGGCACAAGGCGTGAGATTGGAAGACAAGTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATcg                                                          <  1:5086792/93‑2 (MQ=255)
                                 cgATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCag                                                         >  1:1872711/1‑92 (MQ=255)
                                 cgATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCAc                                                         <  2:5706136/93‑1 (MQ=255)
                                  gATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACg                                                        >  1:6509634/1‑93 (MQ=255)
                                   aTTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACgg                                                       >  1:6587445/1‑93 (MQ=255)
                                    tttAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACggg                                                      >  1:5758181/1‑93 (MQ=255)
                                    tttAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACggg                                                      >  1:3522350/1‑93 (MQ=255)
                                     ttAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACgggg                                                     >  1:3481168/1‑93 (MQ=255)
                                       aaTCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAg                                                   >  1:4974761/1‑93 (MQ=255)
                                        aTCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGc                                                  >  1:1102229/1‑93 (MQ=255)
                                        aTCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGc                                                  >  2:5247531/1‑93 (MQ=255)
                                         tCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGcc                                                 >  2:3203940/1‑93 (MQ=255)
                                          cGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCct                                                >  2:6406213/1‑93 (MQ=255)
                                          cGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCct                                                <  1:2965003/93‑1 (MQ=255)
                                            ttGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCctct                                              <  2:4457730/93‑1 (MQ=255)
                                              gCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCa                                            <  2:6324930/93‑1 (MQ=255)
                                                acaAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCTTCTCaga                                          <  1:6363529/93‑1 (MQ=255)
                                                acaAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCaga                                          >  1:1051610/1‑93 (MQ=255)
                                                 caAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCagag                                         <  1:2447903/93‑1 (MQ=255)
                                                  aaGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAgg                                        >  2:1178034/1‑93 (MQ=255)
                                                  aaGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAgg                                        >  2:3312423/1‑93 (MQ=255)
                                                   aGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGc                                       <  2:5613402/93‑1 (MQ=255)
                                                      cGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGtt                                    <  1:3662090/93‑1 (MQ=255)
                                                        tGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGttat                                  <  2:3547636/93‑1 (MQ=255)
                                                        tGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGttat                                  <  1:4711522/93‑1 (MQ=255)
                                                          agaTTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGttatta                                >  1:2592932/1‑93 (MQ=255)
                                                              tGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCa                            >  2:589891/1‑93 (MQ=255)
                                                              tGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCa                            >  1:941644/1‑93 (MQ=255)
                                                                gAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAAc                          >  1:857249/1‑93 (MQ=255)
                                                                gAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAAc                          <  1:5536412/93‑1 (MQ=255)
                                                                gAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAAc                          <  2:3067386/93‑1 (MQ=255)
                                                                gAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAAc                          <  1:78143/93‑1 (MQ=255)
                                                                gAATACAATTTCGCGCCTTTTGTTTTCATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAAc                          <  1:4815342/93‑1 (MQ=255)
                                                                 aaTACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACt                         <  1:1932175/93‑1 (MQ=255)
                                                                   tACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTg                       >  2:1758226/1‑93 (MQ=255)
                                                                   tACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTg                       <  1:3841790/93‑1 (MQ=255)
                                                                   tACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTg                       >  2:5277295/1‑93 (MQ=255)
                                                                    aCAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGa                      <  1:1673497/93‑1 (MQ=255)
                                                                       aTTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGa                   <  2:3813334/93‑1 (MQ=255)
                                                                       aTTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGa                   >  2:1790263/1‑93 (MQ=255)
                                                                       aTTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGa                   <  1:2185065/93‑1 (MQ=255)
                                                                       aTTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGa                   >  1:2063321/1‑93 (MQ=255)
                                                                        tttCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGaa                  >  2:53789/1‑93 (MQ=255)
                                                                          tCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAAtt                >  2:4041041/1‑93 (MQ=255)
                                                                          tCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAAtt                <  1:6286148/93‑1 (MQ=255)
                                                                          tCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAAtt                <  1:3819868/93‑1 (MQ=255)
                                                                            gcgcCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTta              >  1:5836216/1‑93 (MQ=255)
                                                                            gcgcCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTta              >  1:2380399/1‑93 (MQ=255)
                                                                              gcCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTtata            >  2:4755102/1‑93 (MQ=255)
                                                                               ccTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATaa           >  2:5120233/1‑93 (MQ=255)
                                                                                cTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAAt          <  2:2289143/93‑1 (MQ=255)
                                                                                 ttttGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATg         >  1:1826509/1‑93 (MQ=255)
                                                                                 ttttGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATg         <  1:2503285/93‑1 (MQ=255)
                                                                                  tttGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATgg        <  2:4490275/93‑1 (MQ=255)
                                                                                    tGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCt      <  1:4186435/93‑1 (MQ=255)
                                                                                      tttttATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTaa    <  2:1690769/93‑1 (MQ=255)
                                                                                       ttttATTGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAg   <  1:605073/93‑1 (MQ=255)
                                                                                              |                                                                                       
TGAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGA  >  NC_000913/4175855‑4176034

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAA  >  NC_000913/4175856‑4176042
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TAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGG                                                                                                <  SRR4302536.6579767/94‑1 (MQ=60)
GAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTAAGATTGGAATACAATTTCGCTCCTTTTGTTTTTATGG                                                                                                <  SRR4302536.1732642/94‑1 (MQ=60)
 AAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGG                                                                                              <  SRR4302536.4669487/94‑1 (MQ=60)
  AAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGC                                                                                             >  SRR4302536.1773625/1‑94 (MQ=60)
   AAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGgcc                                                                                             >  SRR4302536.5930348/1‑91 (MQ=60)
    AAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCT                                                                                            >  SRR4302536.4212787/1‑94 (MQ=60)
     AGCCTACCCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTT                                                                                           <  SRR4302536.4079053/94‑1 (MQ=60)
     AGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTT                                                                                           >  SRR4302536.4361528/1‑94 (MQ=60)
     AGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTT                                                                                           >  SRR4302536.2018382/1‑94 (MQ=60)
       CCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACGATTTCGCGCCTTTTGTTTTTATGGGCCTTGC                                                                                         >  SRR4302536.3166707/1‑94 (MQ=60)
        CTAACCCAGCGATCAAAAAAGCGGCGATTTCATCGTTGCACAAGGCGTGAGATTGGAATACACTTTCGCGCCTTTTGTTTTTATGGGCCTTGCC                                                                                        >  SRR4302536.3242097/1‑94 (MQ=60)
        CTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCC                                                                                        >  SRR4302536.2736663/1‑94 (MQ=60)
        CTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCC                                                                                        >  SRR4302536.6484507/1‑94 (MQ=60)
         TAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCC                                                                                       >  SRR4302536.5388163/1‑94 (MQ=60)
          AACCCAGCGATCAAAAAAGCTGCGATTTAATCGTTGCACAAGGCGTGAGATTAGAATACAATTTCGCGCTTTTTGTTTTTATGGGCCTTGCCCG                                                                                      <  SRR4302536.2939769/94‑1 (MQ=60)
          AACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCG                                                                                      >  SRR4302536.1858798/1‑94 (MQ=60)
          AACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCG                                                                                      <  SRR4302536.4318064/94‑1 (MQ=60)
          AACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCG                                                                                      >  SRR4302536.5621904/1‑94 (MQ=60)
          AACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCG                                                                                      >  SRR4302536.4578689/1‑94 (MQ=60)
          AACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCG                                                                                      >  SRR4302536.6407410/1‑94 (MQ=60)
           ACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGT                                                                                     >  SRR4302536.3085263/1‑94 (MQ=60)
            CCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGGCTTGCCCGTA                                                                                    >  SRR4302536.2635225/1‑94 (MQ=60)
            CCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTA                                                                                    <  SRR4302536.3601899/94‑1 (MQ=60)
            CCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTA                                                                                    >  SRR4302536.5834174/1‑94 (MQ=60)
              CAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAA                                                                                  <  SRR4302536.1531177/94‑1 (MQ=60)
               AGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAA                                                                                 >  SRR4302536.2952710/1‑94 (MQ=60)
                GCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAAC                                                                                <  SRR4302536.6109839/94‑1 (MQ=60)
                 CGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACG                                                                               >  SRR4302536.5681368/1‑94 (MQ=60)
                 CGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACG                                                                               >  SRR4302536.4645868/1‑94 (MQ=60)
                  GATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGA                                                                              >  SRR4302536.4477367/1‑94 (MQ=60)
                  GATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGA                                                                              <  SRR4302536.875462/94‑1 (MQ=60)
                   ATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGAT                                                                             <  SRR4302536.3105364/94‑1 (MQ=60)
                   ATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGAT                                                                             <  SRR4302536.3698328/94‑1 (MQ=60)
                   ATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGAT                                                                             <  SRR4302536.2980196/94‑1 (MQ=60)
                     CAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTT                                                                           >  SRR4302536.755241/1‑94 (MQ=60)
                     CAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTT                                                                           <  SRR4302536.5536035/94‑1 (MQ=60)
                     CAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTT                                                                           >  SRR4302536.2672100/1‑94 (MQ=60)
                      AAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTT                                                                          <  SRR4302536.2125932/94‑1 (MQ=60)
                       AAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTT                                                                         <  SRR4302536.6404061/94‑1 (MQ=60)
                       AAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTT                                                                         >  SRR4302536.3466058/1‑94 (MQ=60)
                       AAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTT                                                                         >  SRR4302536.6086545/1‑94 (MQ=60)
                       AAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTT                                                                         <  SRR4302536.76576/94‑1 (MQ=60)
                       AAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTGGCCCGTAAAACGATTTTT                                                                         <  SRR4302536.6127971/94‑1 (MQ=60)
                        AAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTT                                                                        >  SRR4302536.5323947/1‑94 (MQ=60)
                        AAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTT                                                                        >  SRR4302536.4480163/1‑94 (MQ=60)
                        AAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTT                                                                        >  SRR4302536.4746418/1‑94 (MQ=60)
                         AAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTA                                                                       >  SRR4302536.2755448/1‑94 (MQ=60)
                          AAGCGTCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTAT                                                                      <  SRR4302536.1811932/94‑1 (MQ=60)
                          AAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTAT                                                                      <  SRR4302536.726220/94‑1 (MQ=60)
                          AAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTAT                                                                      <  SRR4302536.2858674/94‑1 (MQ=60)
                          AAGCGGCGATTTAATCGTTGCACAAAGCGGGAGGTTGGAATACAATTTCGCGCCTTTTGTTTTTATGAGCCTTACCCGTAAAACGATTTTTTCT                                                                      >  SRR4302536.1956901/1‑94 (MQ=60)
                           AGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGGATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATC                                                                     >  SRR4302536.6504629/1‑94 (MQ=60)
                           AGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATA                                                                     <  SRR4302536.4429701/94‑1 (MQ=60)
                             CGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATC                                                                   <  SRR4302536.4079616/94‑1 (MQ=60)
                              GGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCA                                                                  <  SRR4302536.522136/94‑1 (MQ=60)
                              GGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCA                                                                  >  SRR4302536.12717/1‑94 (MQ=60)
                               GCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCGGTAAAACGATTTTTTATATCAC                                                                 <  SRR4302536.4369803/94‑1 (MQ=60)
                               GCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCAG                                                                 >  SRR4302536.1929087/1‑94 (MQ=60)
                               GCGATTTAATCGTGGCACAAGGCGTGAGATTGGAAGACAAGTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCGC                                                                 <  SRR4302536.5238969/94‑1 (MQ=60)
                                CGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACG                                                                >  SRR4302536.6455039/1‑94 (MQ=60)
                                CGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACG                                                                <  SRR4302536.5520561/94‑1 (MQ=60)
                                CGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACG                                                                >  SRR4302536.6703623/1‑94 (MQ=60)
                                 GATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGG                                                               >  SRR4302536.4826761/1‑94 (MQ=60)
                                 GATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGG                                                               >  SRR4302536.1319355/1‑94 (MQ=60)
                                 GATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGG                                                               >  SRR4302536.6783418/1‑94 (MQ=60)
                                  ATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGG                                                              >  SRR4302536.3627601/1‑94 (MQ=60)
                                  ATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGG                                                              <  SRR4302536.5801801/94‑1 (MQ=60)
                                  ATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGG                                                              >  SRR4302536.5929485/1‑94 (MQ=60)
                                   TTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGG                                                             >  SRR4302536.3584962/1‑94 (MQ=60)
                                   TTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGG                                                             <  SRR4302536.6443852/94‑1 (MQ=60)
                                    TTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGA                                                            >  SRR4302536.6833719/1‑94 (MQ=60)
                                    TTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGA                                                            <  SRR4302536.3018632/94‑1 (MQ=60)
                                     TAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAG                                                           >  SRR4302536.5669337/1‑94 (MQ=60)
                                     TAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAG                                                           <  SRR4302536.5861587/94‑1 (MQ=60)
                                     TAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAG                                                           >  SRR4302536.5124175/1‑94 (MQ=60)
                                      AATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGC                                                          >  SRR4302536.1135316/1‑94 (MQ=60)
                                       ATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCC                                                         <  SRR4302536.6048498/94‑1 (MQ=60)
                                        TCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCT                                                        <  SRR4302536.5714129/94‑1 (MQ=60)
                                        TCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCT                                                        <  SRR4302536.276829/94‑1 (MQ=60)
                                         CGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTC                                                       <  SRR4302536.3052337/94‑1 (MQ=60)
                                            TGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCA                                                    >  SRR4302536.6057338/1‑94 (MQ=60)
                                              CACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGA                                                  >  SRR4302536.1083002/1‑94 (MQ=60)
                                               ACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCTTCTCAGAG                                                 <  SRR4302536.6553128/94‑1 (MQ=60)
                                                CAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGG                                                <  SRR4302536.2521860/94‑1 (MQ=60)
                                                CAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGG                                                <  SRR4302536.2473412/94‑1 (MQ=60)
                                                 AAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGC                                               >  SRR4302536.5237620/1‑94 (MQ=60)
                                                 AAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGC                                               >  SRR4302536.2120741/1‑94 (MQ=60)
                                                 AAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGC                                               >  SRR4302536.1118478/1‑94 (MQ=60)
                                                 AAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGC                                               >  SRR4302536.2530611/1‑94 (MQ=60)
                                                 AAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGC                                               <  SRR4302536.6497946/94‑1 (MQ=60)
                                                  AGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCG                                              >  SRR4302536.1028199/1‑94 (MQ=60)
                                                   GGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGT                                             <  SRR4302536.6582189/94‑1 (MQ=60)
                                                   GGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGT                                             >  SRR4302536.2519813/1‑94 (MQ=60)
                                                   GGCGTGAGATTGGAATACAATTTCGCGCCTTTTGCTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGT                                             >  SRR4302536.3133936/1‑94 (MQ=60)
                                                    GCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTT                                            >  SRR4302536.4932949/1‑94 (MQ=60)
                                                     CGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTA                                           <  SRR4302536.3771569/94‑1 (MQ=60)
                                                       TGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATT                                         >  SRR4302536.6202315/1‑94 (MQ=60)
                                                       TGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATT                                         <  SRR4302536.4853240/94‑1 (MQ=60)
                                                       TGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATT                                         >  SRR4302536.1891611/1‑94 (MQ=60)
                                                        GAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTA                                        >  SRR4302536.2670780/1‑94 (MQ=60)
                                                         AGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTAC                                       >  SRR4302536.190073/1‑94 (MQ=60)
                                                          GATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACC                                      <  SRR4302536.5991764/94‑1 (MQ=60)
                                                            TTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCA                                    >  SRR4302536.6337589/1‑94 (MQ=60)
                                                            TTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCA                                    >  SRR4302536.969422/1‑94 (MQ=60)
                                                            TTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCA                                    <  SRR4302536.5022832/94‑1 (MQ=60)
                                                             TGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAA                                   <  SRR4302536.1018341/94‑1 (MQ=60)
                                                             TGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAA                                   >  SRR4302536.2368252/1‑94 (MQ=60)
                                                              GGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAAC                                  <  SRR4302536.120594/94‑1 (MQ=60)
                                                              GGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAAC                                  >  SRR4302536.882447/1‑94 (MQ=60)
                                                               GAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACT                                 <  SRR4302536.80240/94‑1 (MQ=60)
                                                               GAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACT                                 <  SRR4302536.5701420/94‑1 (MQ=60)
                                                               GAATACAATTTCGCGCCTTTTGTTTTCATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACT                                 <  SRR4302536.4960231/94‑1 (MQ=60)
                                                                AATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTT                                <  SRR4302536.1990281/94‑1 (MQ=60)
                                                                  TACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGC                              <  SRR4302536.3956192/94‑1 (MQ=60)
                                                                   ACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAG                             <  SRR4302536.450407/94‑1 (MQ=60)
                                                                   ACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAG                             <  SRR4302536.1722028/94‑1 (MQ=60)
                                                                     AATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGA                           >  SRR4302536.5383353/1‑94 (MQ=60)
                                                                     AATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGA                           >  SRR4302536.2125460/1‑94 (MQ=60)
                                                                      ATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAA                          >  SRR4302536.4533512/1‑94 (MQ=60)
                                                                      ATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAA                          <  SRR4302536.2250932/94‑1 (MQ=60)
                                                                       TTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAAT                         <  SRR4302536.6096280/94‑1 (MQ=60)
                                                                       TTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAAT                         <  SRR4302536.3829431/94‑1 (MQ=60)
                                                                        TTCGCTCCTTTTGTTTTTATGGCCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATT                        <  SRR4302536.1300309/94‑1 (MQ=60)
                                                                        TTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATT                        <  SRR4302536.4870986/94‑1 (MQ=60)
                                                                         TCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTT                       <  SRR4302536.392562/94‑1 (MQ=60)
                                                                         TCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTT                       <  SRR4302536.3933699/94‑1 (MQ=60)
                                                                         TCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTT                       <  SRR4302536.6473481/94‑1 (MQ=60)
                                                                          CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTA                      >  SRR4302536.2452507/1‑94 (MQ=60)
                                                                          CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTA                      >  SRR4302536.6010097/1‑94 (MQ=60)
                                                                          CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTA                      <  SRR4302536.4346040/94‑1 (MQ=60)
                                                                            CGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATA                    >  SRR4302536.6836761/1‑94 (MQ=60)
                                                                            CGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATA                    >  SRR4302536.1184319/1‑94 (MQ=60)
                                                                            CGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATA                    >  SRR4302536.5131808/1‑94 (MQ=60)
                                                                             GCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAA                   >  SRR4302536.1440557/1‑94 (MQ=60)
                                                                             GCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAA                   <  SRR4302536.2041681/94‑1 (MQ=60)
                                                                               CTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGGCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATG                 >  SRR4302536.1630823/1‑94 (MQ=60)
                                                                               CTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATG                 >  SRR4302536.5245624/1‑94 (MQ=60)
                                                                               CTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATG                 >  SRR4302536.1881591/1‑94 (MQ=60)
                                                                               CTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATG                 >  SRR4302536.6476525/1‑94 (MQ=60)
                                                                                TTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGG                <  SRR4302536.2578764/94‑1 (MQ=60)
                                                                                TTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGG                <  SRR4302536.2449072/94‑1 (MQ=60)
                                                                                 TTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGC               <  SRR4302536.3951577/94‑1 (MQ=60)
                                                                                  TTGTTTTTATGGGCGTTGCCCGTAAAACGATTTTTTATATCACGGTGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCT              <  SRR4302536.4254858/94‑1 (MQ=60)
                                                                                  TTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCT              <  SRR4302536.1944499/94‑1 (MQ=60)
                                                                                  TTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCT              >  SRR4302536.845296/1‑94 (MQ=60)
                                                                                   TGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTA             >  SRR4302536.1668896/1‑94 (MQ=60)
                                                                                   TGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTA             <  SRR4302536.4310832/94‑1 (MQ=60)
                                                                                     TTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAG           <  SRR4302536.3770986/94‑1 (MQ=60)
                                                                                     TTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAG           >  SRR4302536.3099677/1‑94 (MQ=60)
                                                                                      TTTTATTGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGA          <  SRR4302536.623043/94‑1 (MQ=60)
                                                                                      TTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGA          >  SRR4302536.3619097/1‑94 (MQ=60)
                                                                                      TTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGA          >  SRR4302536.888006/1‑94 (MQ=60)
                                                                                      TTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGA          >  SRR4302536.262/1‑94 (MQ=60)
                                                                                        TTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAA        <  SRR4302536.1254058/94‑1 (MQ=60)
                                                                                           atgGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGT      <  SRR4302536.3275983/91‑1 (MQ=60)
                                                                                           atgGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGT      >  SRR4302536.5399694/4‑94 (MQ=60)
                                                                                            tgGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTA     >  SRR4302536.4731511/3‑94 (MQ=60)
                                                                                            GGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTAC    >  SRR4302536.1038942/1‑94 (MQ=60)
                                                                                              GGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACA   >  SRR4302536.3864869/1‑94 (MQ=60)
                                                                                              GGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACA   <  SRR4302536.5132718/94‑1 (MQ=60)
                                                                                                GCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAA  <  SRR4302536.962256/94‑1 (MQ=60)
                                                                                                |                                                                                              
GAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAA  >  NC_000913/4175856‑4176042

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: