Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,203,198 |
Δ1 bp |
coding (312/1290 nt) |
purD ← |
phosphoribosylglycinamide synthetase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,203,195 | 0 | T | . | 100.0%
| 616.8
/ NA
| 133 | coding (315/1290 nt) | purD | phosphoribosylglycinamide synthetase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (48/85); total (48/85) |
Only 100 of 182 total aligned reads displayed.
CGCAGATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGCTTTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCA > NC_000913/4203103‑4203283
|
cGCAGATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCCGGAAAACTTTTGTAAACCCt > 1:4064144/1‑93 (MQ=255)
cGCAGATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGCt < 2:857519/93‑1 (MQ=255)
cGCAGATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGCt < 2:4976225/93‑1 (MQ=255)
gCAGATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCACCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGCtt < 1:612835/93‑1 (MQ=255)
aGATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGGCCGGGAATCTTTTGTAAACGCtttt > 2:4906519/1‑93 (MQ=255)
aGATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGGCAGGAAATCTTTGGTAAAAGCtttg > 2:1582695/1‑92 (MQ=255)
gATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGGCCGGGAATCCTTTGGTAAA‑GCtttga > 1:4302461/1‑91 (MQ=255)
aCGCCAGCGCAGGTTCTACCTCGGTGAAGTCCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGcc < 2:332442/93‑1 (MQ=255)
cGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGGCAGGAAATCTTTTGTAAAAGCTTTT‑AGCCt > 1:3401101/1‑93 (MQ=255)
ccAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGGAATCTTTTGTAAACGC‑TTTGAGCCTTc > 2:5730597/1‑93 (MQ=255)
ccAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTc < 2:5212869/93‑1 (MQ=255)
cAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGGCAGGGAAACTTTTGTAAAAGCTTTT‑AGCCtttc > 2:5912778/1‑91 (MQ=255)
cAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTcc < 2:5510356/93‑1 (MQ=255)
cAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTcc < 1:2161340/93‑1 (MQ=255)
aGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCa < 2:6531766/93‑1 (MQ=255)
gcgcAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAg < 1:4833519/93‑1 (MQ=255)
cgcAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGt < 2:2870506/93‑1 (MQ=255)
cgcAGGGTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGt < 2:4728658/93‑1 (MQ=255)
ggTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCCGGAAATCTTTTGTAAACGC‑TTTGAGCCTTCCAGGTggg > 1:2135230/1‑93 (MQ=255)
ggTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTggg < 2:2356699/93‑1 (MQ=255)
ttCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGGCCGGGAAACTTTTGGTAAA‑GCTTTT‑AGCCCTCCCGTTggggc > 2:557165/1‑91 (MQ=255)
cTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGGCAGGAAATCTTTTGGGAACGC‑TTTGAGCCTTCCAGTTGGGgcgc > 2:2723471/1‑93 (MQ=255)
tACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGgcgcc > 1:304079/1‑92 (MQ=255)
tACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGACAGGAAAACTTTGGGAAACGCTTTT‑CGCCTTCCAGTTGGGgcgcc > 2:3381695/1‑92 (MQ=255)
ccTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCAcc < 1:5479062/93‑1 (MQ=255)
cTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCt < 2:4081803/93‑1 (MQ=255)
cTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCt < 1:3217759/93‑1 (MQ=255)
tCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGGCCGGGAATCTTTGGTAAAAGCTTTT‑AGCCTTTCCGTTGGGCCGCAcccg > 1:2321529/1‑91 (MQ=255)
cGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGGCAGGAAATCTTTTGTAAAAGCTTTT‑AGCCTTCCCGTTGGGCCGCAccctc > 2:1230552/1‑90 (MQ=255)
ggTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCg < 1:628050/93‑1 (MQ=255)
tGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGt < 1:3610350/93‑1 (MQ=255)
tGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGt < 1:4403849/93‑1 (MQ=255)
gAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCCAGGAATCTTTGGGAAAC‑CCATTGTACCTTTCAGTTTGGGCGTACCTTTGGtt > 1:3161779/1‑93 (MQ=255)
gAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGGAAACTTTTGTAAAAGCTTTT‑AGGCTTCCAGTTTGGGCGCGCCTGCgggt > 1:4534950/1‑91 (MQ=255)
gAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGACAGGAAATCTTTGGTAAACGCTTTT‑TGCCTTCCCATTGGGCCGCACCTGCgggt > 2:4377475/1‑91 (MQ=255)
aGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGGCAGGGAATCTTTGGGAAAAGC‑CTTGAGCCTTCCCGTTGGGGCGCACCCGCGGGT‑gg > 2:2805674/1‑93 (MQ=255)
aGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCCTGGAAAATTTGGTTAACCCTTTT‑TGCCTTCCCGTTGTGCCCCACCTACGGTT‑gg > 1:3356332/1‑93 (MQ=255)
aGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑gg < 2:5304202/93‑1 (MQ=255)
aGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑gg < 1:2797845/93‑1 (MQ=255)
gTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTTGTAAAAGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGGT‑ggg > 1:1568473/1‑93 (MQ=255)
ttCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGc < 1:5671454/93‑1 (MQ=255)
ttCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGc < 2:4633563/93‑1 (MQ=255)
ggTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGGCGCCCCTGCGGTT‑GGGCCGaa > 1:4226856/1‑93 (MQ=255)
ggTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGaa < 1:4774472/93‑1 (MQ=255)
gTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTTGGAAAAGC‑TTTGAGCCTTCCAGTTGGGCCCGACCTGCGGTTGGGGCCGaa > 2:1877047/1‑93 (MQ=255)
tATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGa < 2:6571768/93‑1 (MQ=255)
tATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGa < 2:6265427/93‑1 (MQ=255)
tATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGa < 1:4347793/93‑1 (MQ=255)
aTTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGGAATCTTTTGTAAAAGC‑TTTGAGCCTTCCAGTTGGGGCGCACCTGCGGTT‑GGGGCGGAGAt > 1:5089713/1‑93 (MQ=255)
aTTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGAt < 1:1340634/93‑1 (MQ=255)
aTTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGGAAACGC‑TTTGAGGCTTCCCGTTGTGCCGCACCTGCGGTT‑GTGCCGAAggt > 2:3262912/1‑91 (MQ=255)
ttCCGCCGTAGGGATCTTATGGC‑GGGGCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGGCGgagaat > 2:3751538/1‑91 (MQ=255)
ttCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGAtt < 2:2683307/93‑1 (MQ=255)
tCCGCCGTAGGGATCTTATGGC‑GGGCCAGGGAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTTGGCCGCACCTGCGGGT‑GGGGCGGAGAatt > 2:447366/1‑93 (MQ=255)
ccgccgTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGAtttt < 2:3103725/93‑1 (MQ=255)
cgccgTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTTGTAAACGC‑TTTGAGCCTTCCCGTTGGGCCGCACCCGCGGGT‑GGGGCGAAGAttttt > 1:5799946/1‑92 (MQ=255)
cgccgTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGGCGCACCTGCGGTT‑GGGCCGAAGATTTTc > 1:5422466/1‑93 (MQ=255)
cgccgTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTc < 1:857248/93‑1 (MQ=255)
cgccgTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTc < 2:1684938/93‑1 (MQ=255)
gccgTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCa < 1:4263342/93‑1 (MQ=255)
gTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTTCAGTTTGGCCGCACCTGCGGGT‑GGGCCGAAGATTTTccggc > 2:2553501/1‑89 (MQ=255)
gTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGGAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGGT‑GGGCCGGAGATTTTCAGcc > 1:991754/1‑93 (MQ=255)
aTCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCcggcgg < 1:2041058/93‑1 (MQ=255)
aTCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCccgcgg > 2:6353105/1‑93 (MQ=255)
tCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCCGTTTGGCCGCACCTGCGGTT‑GGGCCGAAAATTTTCAGCCCggcggc > 1:4490276/1‑93 (MQ=255)
ttATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑TGGCCGAAGATTTTCAGCCCGGCGgcgc > 1:3172059/1‑93 (MQ=255)
ttATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGgcgc < 2:5440848/93‑1 (MQ=255)
tATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGGT‑GGGCCGAAGATTTTCAGCCCGGCGGcgcg > 2:6299613/1‑93 (MQ=255)
aTGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCgg < 2:4398370/93‑1 (MQ=255)
tGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCGGa < 1:5226824/93‑1 (MQ=255)
ggC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCGGaa < 1:3540166/93‑1 (MQ=255)
gC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAg < 1:50490/93‑1 (MQ=255)
gC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAg > 2:5668082/1‑93 (MQ=255)
gggCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGt < 2:5997179/93‑1 (MQ=255)
gggCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGt > 1:2978399/1‑93 (MQ=255)
gCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTAt < 2:5944380/93‑1 (MQ=255)
gCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTAt < 2:1998611/93‑1 (MQ=255)
cAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGGATca > 1:4024003/1‑92 (MQ=255)
cAGGAAATCTTTGGTAAACGC‑TTTGAGACTTCCAGTTGGGCCGCACCTGCGGTT‑GGGACGAAGATTTTCAGCCCGGCGGCGCGGCAGGAATCg > 1:6628111/1‑93 (MQ=255)
gAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGAcc > 2:3503647/1‑93 (MQ=255)
gAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGAcc > 1:2617547/1‑93 (MQ=255)
aaaTCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGGCCa < 1:3288566/93‑1 (MQ=255)
aaaTCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCa > 1:4594626/1‑93 (MQ=255)
aaTCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCAc > 2:5913866/1‑93 (MQ=255)
aaTCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCAc > 1:1679430/1‑93 (MQ=255)
aaTCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCAc < 1:5535109/93‑1 (MQ=255)
aTCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACg > 1:4152954/1‑93 (MQ=255)
aTCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACg > 2:6370360/1‑93 (MQ=255)
tCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGc > 1:3810940/1‑93 (MQ=255)
tCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGc > 2:4530736/1‑93 (MQ=255)
tCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGc > 2:2476022/1‑93 (MQ=255)
tCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGAACACGc > 2:2610809/1‑93 (MQ=255)
cTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGcc < 2:1413754/93‑1 (MQ=255)
tttGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCt < 1:2583186/93‑1 (MQ=255)
tttGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCt < 2:4175423/93‑1 (MQ=255)
ggTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTc > 2:1552811/1‑93 (MQ=255)
aaaCGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCAcc > 1:1917953/1‑93 (MQ=255)
aaaCGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCAcc < 2:4504134/93‑1 (MQ=255)
aaaCGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCAcc > 2:6685626/1‑93 (MQ=255)
aaCGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCa < 2:24195/93‑1 (MQ=255)
|
CGCAGATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGCTTTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT‑GGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCA > NC_000913/4203103‑4203283
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGCTTTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCAGCGGCGCT > NC_000913/4203105‑4203291
|
CAGATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCCGGGAATCTTTTGTAAAAGCTTTT > SRR4302536.4713722/1‑94 (MQ=60)
ATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCCGGAAATCTTTGGGTAACGCTTTTGgc > SRR4302536.3654098/1‑92 (MQ=60)
ATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCCGGAAAACTTTGGGAAACCCTTTTtgc > SRR4302536.3385103/1‑91 (MQ=60)
ATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGC < SRR4302536.2487890/94‑1 (MQ=60)
ACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGGCAGGAAATCTTTTGTAAAAGCTTTT‑AGCCT > SRR4302536.3502252/1‑94 (MQ=60)
ACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGGAATCTTTTGTAAACGCTTTTaggct > SRR4302536.2045671/1‑89 (MQ=60)
CGCCAGCGCAGTTTCTAGCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTT < SRR4302536.3303194/94‑1 (MQ=60)
CGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGGAATCTTTTGTAAAAGC‑TTTGAGCCTT > SRR4302536.6204320/1‑94 (MQ=60)
CCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCCGGGAAACTTTTGTAAACGCTTTT‑AGCCTTTC > SRR4302536.2161961/1‑94 (MQ=60)
CAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCA < SRR4302536.5645877/94‑1 (MQ=60)
CAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCA < SRR4302536.2226349/94‑1 (MQ=60)
CAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCA < SRR4302536.5165484/94‑1 (MQ=60)
GCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGT < SRR4302536.4978982/94‑1 (MQ=60)
GCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTG < SRR4302536.4315179/94‑1 (MQ=60)
CAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGGAATCTTTGGTTGAAGCTTTTG‑GCCTTCCAGTAGG > SRR4302536.3501778/1‑94 (MQ=60)
AGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGGCAGGAAATCTTTTGTTAACGC‑TTTGAGCCTTCCAGTTGGG > SRR4302536.4749648/1‑94 (MQ=60)
AGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCCGGAAATCTTTTGTAAACGC‑TTTGAGCCTTCCAGGTGGG > SRR4302536.2199310/1‑94 (MQ=60)
AGGTTCTACCTCCGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGTAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGG < SRR4302536.2352579/94‑1 (MQ=60)
CTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGGCAGGGAATCTTTGGTAAAGGCTTTT‑AGCCTTCCAGgttgggcgca > SRR4302536.3257658/1‑84 (MQ=60)
CTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGgcgcc > SRR4302536.312158/1‑89 (MQ=60)
CCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCT < SRR4302536.5642688/94‑1 (MQ=60)
CTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGGCCGGGAATCTTTGGTAAAAGCTTTT‑AGCCTTTCCGTTGGGCCGCACCCG > SRR4302536.2391972/1‑94 (MQ=60)
CTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGGCAGGAAATCTTTGGTAAACGCTTTT‑AGGCCTCCCGTTGGGGCGCACCTG > SRR4302536.6852771/1‑94 (MQ=60)
CTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTG < SRR4302536.3312120/94‑1 (MQ=60)
GGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGG < SRR4302536.646665/94‑1 (MQ=60)
TGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGGAAACTTTTGTAAAAGCTTTT‑AGGCTTCCAGTTTGGGCGCGCCTGCGGGT > SRR4302536.4670926/1‑94 (MQ=44)
TGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT < SRR4302536.4535527/94‑1 (MQ=60)
TGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT < SRR4302536.3718295/94‑1 (MQ=60)
AAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGG < SRR4302536.4639023/94‑1 (MQ=60)
AGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTTGTAAAAGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGGTGGG > SRR4302536.1614481/1‑94 (MQ=60)
AGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGG < SRR4302536.2880827/94‑1 (MQ=60)
TTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCC < SRR4302536.5840042/94‑1 (MQ=60)
TGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGGCGCCCCTGCGGTTGGGCCGAA > SRR4302536.4352629/1‑94 (MQ=60)
TGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGGCGCACCCGCGGTTGGGCCGAA > SRR4302536.520708/1‑94 (MQ=60)
GGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAG < SRR4302536.4918241/94‑1 (MQ=60)
GTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTTGTAAACGC‑CTTGAGCCCTCCCGATGGGCCGCACCTGCGGGTGGGGCGGAGA > SRR4302536.3934850/1‑94 (MQ=54)
GTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGGCTTCCAGTTGGGCCGCACCTGCGGTTGGGGCGGAGA > SRR4302536.4487301/1‑94 (MQ=60)
TATTCCGCCGTAGGGATCTTATGGCGGGCCAGGGAATCTTTTGTAAAAGC‑TTTGAGCCTTCCAGTTGGGGCGCACCTGCGGTTGGGGCGGAGAT > SRR4302536.5241942/1‑94 (MQ=60)
TATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGAT < SRR4302536.4477918/94‑1 (MQ=60)
ATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATT < SRR4302536.1380615/94‑1 (MQ=60)
CCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTTGTAAACGC‑TTTGAGCCTTCCCGTTGGGCCGCACCCGCGGGTGGGGCGAAGATTTTT > SRR4302536.5972642/1‑94 (MQ=60)
CCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGGCGCACCTGCGGTTGGGCCGAAGATTTTC > SRR4302536.5584564/1‑94 (MQ=60)
CGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCA < SRR4302536.882446/94‑1 (MQ=60)
GCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAG < SRR4302536.4390405/94‑1 (MQ=60)
CGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGGAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGGTGGGCCGGAGATTTTCAGCC > SRR4302536.1021001/1‑94 (MQ=60)
GTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCC < SRR4302536.5830989/94‑1 (MQ=60)
GAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCGCCTGCGGTTGGGCCGAAGATTTTCAGCCCG < SRR4302536.4548077/94‑1 (MQ=60)
AGGGATCTTATGGCGGGCCAGGAAATCTTTTGTAAACGC‑TTTGAGCCTTCCAGTTGGGGCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGG > SRR4302536.2709871/1‑94 (MQ=60)
AGGGATCTTATGGCGGGCCAGGAAATCTTTTGTAAAAGCTTTT‑AGCCTTCCAGTTTGGGCGCACCTGCGGTTGGGGCGAAGATTTTCAGCCCGG > SRR4302536.5553566/1‑94 (MQ=60)
GGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCCGCG > SRR4302536.748534/1‑94 (MQ=60)
GATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCTCCTGCGGTTGGGCAGAAGATTTTCAGCCCGGCGG < SRR4302536.4287675/94‑1 (MQ=60)
ATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCCGTTTGGCCGCACCTGCGGTTGGGCCGAAAATTTTCAGCCCGGCGGC > SRR4302536.4625096/1‑94 (MQ=60)
ATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGC < SRR4302536.2102521/94‑1 (MQ=60)
CTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGGCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCCGCGGCGC > SRR4302536.6011995/1‑94 (MQ=60)
CTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTTGGCCGAAGATTTTCAGCCCGGCGGCGC > SRR4302536.3264999/1‑94 (MQ=60)
TTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCG < SRR4302536.3216799/94‑1 (MQ=60)
ATGGCGGGCCAGGAAATCTTTTGTAAACGCTTTT‑AGCCTTTCCGTTTGGCCGCACCTTCGGTTGGGCCGGAGATTTTCAGCCCGGCGGCGCGGA > SRR4302536.4614203/1‑94 (MQ=60)
ATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGGCGCACCTGCGGTTGGGGCGAAGATTTTCAGCCCGGCGGCGCGGG > SRR4302536.3520061/1‑94 (MQ=60)
TGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAA < SRR4302536.5382568/94‑1 (MQ=60)
GGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAG < SRR4302536.3646019/94‑1 (MQ=60)
GCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGG < SRR4302536.51878/94‑1 (MQ=60)
CGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGT < SRR4302536.6339837/94‑1 (MQ=60)
CGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGT > SRR4302536.3066064/1‑94 (MQ=60)
GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTA > SRR4302536.1918279/1‑94 (MQ=60)
GCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGCAGGTATC > SRR4302536.2852925/1‑94 (MQ=60)
GCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATC > SRR4302536.1622554/1‑94 (MQ=60)
CCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGgatca > SRR4302536.4143382/1‑89 (MQ=60)
CCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCG < SRR4302536.4390186/94‑1 (MQ=60)
CCAGGAAATCTTTGGTAAACGC‑TTTGAGACTTCCAGTTGGGCCGCACCTGCGGTTGGGACGAAGATTTTCAGCCCGGCGGCGCGGCAGGAATCG > SRR4302536.6825257/1‑94 (MQ=60)
AGGAAATCTTTGGTAAAAGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGAC > SRR4302536.2680249/1‑94 (MQ=60)
GGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACC > SRR4302536.2696077/1‑94 (MQ=60)
GGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACC < SRR4302536.5323465/94‑1 (MQ=60)
GGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACC > SRR4302536.3830033/1‑94 (MQ=60)
GAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCA > SRR4302536.4133065/1‑94 (MQ=60)
GAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCA > SRR4302536.4732560/1‑94 (MQ=60)
AAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGGCCAC < SRR4302536.3385335/94‑1 (MQ=60)
AAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCAC > SRR4302536.1728110/1‑94 (MQ=60)
AATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACG < SRR4302536.5700090/94‑1 (MQ=60)
AATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACG > SRR4302536.4276208/1‑94 (MQ=60)
ATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGC > SRR4302536.3924528/1‑94 (MQ=60)
ATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGC > SRR4302536.4756406/1‑94 (MQ=60)
CTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCT > SRR4302536.4265431/1‑94 (MQ=60)
TTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTT < SRR4302536.2660804/94‑1 (MQ=60)
TTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGGAGATTTTCAGCGCGGCGGCGCGGAAGGAATCGACCACGCCTTT > SRR4302536.3626535/1‑94 (MQ=60)
TAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACC > SRR4302536.941042/1‑94 (MQ=60)
TAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACC > SRR4302536.2980136/1‑94 (MQ=60)
TAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACC > SRR4302536.1975652/1‑94 (MQ=60)
AAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCA > SRR4302536.4395914/1‑94 (MQ=60)
AAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCA > SRR4302536.2032755/1‑94 (MQ=60)
AACGC‑TTTGAGCCTTCCAGTTGGGCCGCCCCTGCGGTTGGGCCGGCGATTTTAAGCCCGCCGGCGCGGACGGTATCGACgccgcctctcaccgc > SRR4302536.5082577/1‑79 (MQ=48)
AACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCAG > SRR4302536.2833311/1‑94 (MQ=60)
ACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCAGC > SRR4302536.4231370/1‑94 (MQ=60)
ACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCAGC > SRR4302536.2775874/1‑94 (MQ=60)
ACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTCTCACCAGC < SRR4302536.6553303/94‑1 (MQ=60)
CTTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCAGCGGC > SRR4302536.1670473/1‑94 (MQ=60)
TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCAGCGGCG > SRR4302536.3658890/1‑94 (MQ=60)
TGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCAGCGGCGCT < SRR4302536.5077226/94‑1 (MQ=60)
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CAGATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGCTTTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCAGCGGCGCT > NC_000913/4203105‑4203291
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
