Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,219,434 |
A→G |
A211A (GCT→GCC) |
arp ← |
Arp |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,219,434 | 0 | A | G | 100.0%
| 867.7
/ NA
| 261 | A211A (GCT→GCC) | arp | Arp |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (131/130); total (131/130) |
Only 100 of 288 total aligned reads displayed.
CACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCAGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGC > NC_000913/4219344‑4219523
|
caccaGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAggcggc < 1:5873338/93‑1 (MQ=255)
ccaGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGgcaa < 2:2309315/93‑1 (MQ=255)
ccaGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATAACCGCAGGCGgcaa > 1:3598244/1‑93 (MQ=255)
aGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGgcaacg > 1:5476544/1‑93 (MQ=255)
gTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGgcaacgc < 1:795719/93‑1 (MQ=255)
gTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGgcaacga > 2:270937/1‑92 (MQ=255)
tAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGgcaacgca > 1:1868557/1‑93 (MQ=255)
aaTATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGgcaacgcaa < 2:4250104/93‑1 (MQ=255)
tatGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGcaacgcaacg > 1:6259210/1‑93 (MQ=255)
ggCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGccc > 2:5639807/1‑93 (MQ=255)
ggCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGccc < 2:665151/93‑1 (MQ=255)
tGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTc < 2:6063956/93‑1 (MQ=255)
ccATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAg < 1:1605262/93‑1 (MQ=255)
aTAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGa > 2:3299016/1‑93 (MQ=255)
tAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGAc > 1:6325792/1‑93 (MQ=255)
aaCACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACg > 1:39309/1‑93 (MQ=255)
cacTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGc > 2:2567720/1‑93 (MQ=255)
cacTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGc < 1:5424138/93‑1 (MQ=255)
acTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCt < 2:6257866/93‑1 (MQ=255)
cTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTg > 2:3539203/1‑93 (MQ=255)
tGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTgg < 2:3705992/93‑1 (MQ=255)
gATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGa > 2:755349/1‑93 (MQ=255)
aTTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCaa < 1:3343062/93‑1 (MQ=255)
aTTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCaa < 1:2041043/93‑1 (MQ=255)
aTTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCaa < 1:1777795/93‑1 (MQ=255)
taTTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGcc < 2:3983853/92‑1 (MQ=255)
gATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGcc > 1:2920485/1‑93 (MQ=255)
gATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGcc < 2:1932437/93‑1 (MQ=255)
aTTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCCCCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCa < 1:3845848/93‑1 (MQ=255)
ttCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCaa > 2:3152256/1‑93 (MQ=255)
ttCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCaa > 1:72722/1‑93 (MQ=255)
ttCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCaa > 1:6374254/1‑93 (MQ=255)
tCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCaaa > 2:5845920/1‑93 (MQ=255)
ccATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAg < 1:1992153/93‑1 (MQ=255)
aTCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTc > 2:4739781/1‑93 (MQ=255)
aTCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTc > 2:3901721/1‑93 (MQ=255)
tCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCt > 1:5591591/1‑93 (MQ=255)
tCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCt < 2:3077565/93‑1 (MQ=255)
tCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCt < 1:1389034/93‑1 (MQ=255)
cTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTg < 1:3430562/93‑1 (MQ=255)
ttGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTgg < 1:3185222/93‑1 (MQ=255)
gTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGtt < 1:4428323/93‑1 (MQ=255)
tCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGttt < 2:3420486/93‑1 (MQ=255)
tCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGttt < 1:1298083/93‑1 (MQ=255)
aaaaTATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGttttt < 2:2238307/93‑1 (MQ=255)
aaaaTATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGttttt > 1:5230014/1‑93 (MQ=255)
aaaaTATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGttttt > 1:4215960/1‑93 (MQ=255)
aaTATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGc > 1:5093184/1‑93 (MQ=255)
aaTATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGc > 2:1510074/1‑93 (MQ=255)
aaTATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGc > 1:4950890/1‑93 (MQ=255)
aaTATGCTTTCAGAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGc > 2:3590841/1‑93 (MQ=255)
atatGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCa > 1:3759581/1‑93 (MQ=255)
tatGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCCACGCCCCTCAGGACGGCTGGAAACCAACGCCAACGTCTGGTTTTTGCAt > 2:1175266/1‑93 (MQ=255)
tatGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCAt < 2:1390892/93‑1 (MQ=255)
tatGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCAt > 2:1716276/1‑93 (MQ=255)
tacgCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGGAACCAACGCCAAAGTCTGGTTTTTGCAt > 1:3257493/4‑93 (MQ=255)
atGCTTTCATAACTAGCCCGAAATCACCGCCGGCGGCAACGCAAAGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCAtt > 1:3076006/1‑93 (MQ=255)
tGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCAttt > 2:5127593/1‑93 (MQ=255)
cTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCAttttt < 2:1018582/93‑1 (MQ=255)
tttCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGTAtttttt > 2:6450736/1‑93 (MQ=255)
tttCATAACTACCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCAtttttt < 2:4564895/93‑1 (MQ=255)
tCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTttgt < 1:1118575/93‑1 (MQ=255)
tCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTttgt < 2:2057033/93‑1 (MQ=255)
cATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTttgtt > 2:1103860/1‑93 (MQ=255)
aTAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTttgttg > 2:4024694/1‑93 (MQ=255)
aaCTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGaa > 2:1619001/1‑93 (MQ=255)
aaCTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGaa > 2:4960316/1‑93 (MQ=255)
aaCTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGaa < 1:3008325/93‑1 (MQ=255)
aaCTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGaa > 1:4336834/1‑93 (MQ=255)
aCTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAg > 1:4102651/1‑93 (MQ=255)
aCTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAg < 1:2831189/93‑1 (MQ=255)
aCTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAg > 2:2632556/1‑93 (MQ=255)
aCTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAg < 2:4389342/93‑1 (MQ=255)
aCTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTGTTTGCATTTTTTGTTGAAg < 1:6538579/93‑1 (MQ=255)
cTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGt < 1:6238932/93‑1 (MQ=255)
cTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGt < 2:3362270/93‑1 (MQ=255)
cTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGt < 2:847230/93‑1 (MQ=255)
tAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTg > 1:2336793/1‑93 (MQ=255)
aGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGc < 2:2875344/93‑1 (MQ=255)
aGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGc < 2:5520161/93‑1 (MQ=255)
cccGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGt > 1:1020654/1‑93 (MQ=255)
ccGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTg > 1:5850911/1‑93 (MQ=255)
cGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTga < 1:4910952/93‑1 (MQ=255)
cGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTga < 1:4042734/93‑1 (MQ=255)
aaTCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGaa > 2:881097/1‑93 (MQ=255)
aaTCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGaa < 1:4697750/93‑1 (MQ=255)
aTCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAGCGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGaaa < 1:2592676/93‑1 (MQ=255)
cACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAAtt < 2:1831188/93‑1 (MQ=255)
cACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAAtt < 1:6611591/93‑1 (MQ=255)
cACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAAtt < 2:6093709/93‑1 (MQ=255)
aCCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGACAttt > 1:2159276/1‑93 (MQ=255)
ccGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAAtttt < 1:3529868/93‑1 (MQ=255)
cGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAAttttt > 1:71111/1‑93 (MQ=255)
gcaggcggCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTc < 2:543020/93‑1 (MQ=255)
gcaggcggCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTc < 1:5522569/93‑1 (MQ=255)
aggcggCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAg < 1:2213383/93‑1 (MQ=255)
ggcggcAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGc > 2:4501413/1‑93 (MQ=255)
ggcggcAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGc > 1:4796697/1‑93 (MQ=255)
ggcggcAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGc < 1:1267575/93‑1 (MQ=255)
ggcggcAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGGTTTTTCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGc < 2:638848/93‑1 (MQ=255)
|
CACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCAGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGC > NC_000913/4219344‑4219523
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATCCACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCAGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCTGA > NC_000913/4219341‑4219526
|
ATCCACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCG > SRR4302536.2912748/1‑94 (MQ=60)
ATCCACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCG > SRR4302536.1878938/1‑94 (MQ=60)
CCACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGC > SRR4302536.3962950/1‑94 (MQ=60)
CACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCA < SRR4302536.6048316/94‑1 (MQ=60)
CACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCA > SRR4302536.4526782/1‑94 (MQ=60)
ACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAA < SRR4302536.249034/94‑1 (MQ=60)
ACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGCCGGCAA > SRR4302536.5522415/1‑94 (MQ=60)
ACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATAACCGCAGGCGGCAA > SRR4302536.3705840/1‑94 (MQ=60)
CAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACG > SRR4302536.5640121/1‑94 (MQ=60)
AGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGC < SRR4302536.3028410/94‑1 (MQ=60)
GTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCA < SRR4302536.819029/94‑1 (MQ=60)
GTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCA > SRR4302536.1924797/1‑94 (MQ=60)
TAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAA > SRR4302536.3580475/1‑94 (MQ=60)
AATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCTAC < SRR4302536.6816471/94‑1 (MQ=60)
ATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACG > SRR4302536.6445690/1‑94 (MQ=60)
ATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACG > SRR4302536.5191499/1‑94 (MQ=60)
ATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCC < SRR4302536.4867025/94‑1 (MQ=60)
ATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCC < SRR4302536.5375332/94‑1 (MQ=60)
GGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCC < SRR4302536.1332051/94‑1 (MQ=60)
CTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTC > SRR4302536.64951/1‑94 (MQ=60)
CTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTC < SRR4302536.45307/94‑1 (MQ=60)
TGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACTGCAGGCGGCAACGCAACGCCCCTCA < SRR4302536.6652786/94‑1 (MQ=60)
TCCATAACACTTATGCCATTTGATTCCATCATGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAG < SRR4302536.1394003/94‑1 (MQ=60)
GCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAG < SRR4302536.3478335/94‑1 (MQ=60)
GCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAG < SRR4302536.3255443/94‑1 (MQ=60)
GCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACCCCCCTCAG < SRR4302536.6802017/94‑1 (MQ=60)
CCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGG < SRR4302536.1652101/94‑1 (MQ=60)
CATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGA > SRR4302536.4074598/1‑94 (MQ=60)
ATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGAC > SRR4302536.1318280/1‑94 (MQ=60)
ATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGAC > SRR4302536.6514202/1‑94 (MQ=60)
TAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACG > SRR4302536.40408/1‑94 (MQ=60)
TAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACG > SRR4302536.5600013/1‑94 (MQ=60)
AACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACACAACGCCCCTCAGGACGG > SRR4302536.4247379/1‑94 (MQ=60)
caccgatgcgatgttacTCCATCTTGTCAAAATATGCTTTCATAACTAGCCAGAAATCTCCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCT < SRR4302536.836350/77‑1 (MQ=60)
CACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCT < SRR4302536.5586291/94‑1 (MQ=60)
CTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGG > SRR4302536.3084766/1‑94 (MQ=60)
TGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGA < SRR4302536.6231991/94‑1 (MQ=60)
TGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAAC > SRR4302536.4386969/1‑94 (MQ=60)
CCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCA > SRR4302536.6513738/1‑94 (MQ=60)
CATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAA > SRR4302536.2372639/1‑94 (MQ=60)
ATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAAC < SRR4302536.1831566/94‑1 (MQ=60)
ATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAAC < SRR4302536.3442113/94‑1 (MQ=60)
ATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAAC < SRR4302536.2102506/94‑1 (MQ=60)
TTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACG < SRR4302536.5167209/94‑1 (MQ=60)
TGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCC > SRR4302536.3006673/1‑94 (MQ=60)
ATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCCCCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAC < SRR4302536.3960349/94‑1 (MQ=60)
ATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAA > SRR4302536.6564225/1‑94 (MQ=60)
ATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAA > SRR4302536.74685/1‑94 (MQ=60)
ATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAA > SRR4302536.5004711/1‑94 (MQ=60)
TTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAA > SRR4302536.1773671/1‑94 (MQ=60)
TCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAG < SRR4302536.4212385/94‑1 (MQ=60)
CCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCATGCGGCAACGCAACGCCCCTCAGGACGGCTGGGAACCAACGCCAAAGT > SRR4302536.4730583/1‑94 (MQ=60)
CCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGT > SRR4302536.5641670/1‑94 (MQ=60)
CCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGT < SRR4302536.2052053/94‑1 (MQ=60)
CCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGT > SRR4302536.3938286/1‑94 (MQ=60)
CATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTC > SRR4302536.3360290/1‑94 (MQ=60)
ATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCT > SRR4302536.5757868/1‑94 (MQ=60)
ATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCT < SRR4302536.6387720/94‑1 (MQ=60)
ATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCT < SRR4302536.2487496/94‑1 (MQ=60)
ATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCT < SRR4302536.4929742/94‑1 (MQ=60)
TCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTG < SRR4302536.5995152/94‑1 (MQ=60)
TCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTG < SRR4302536.1430398/94‑1 (MQ=60)
TCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTG < SRR4302536.6527839/94‑1 (MQ=60)
TCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTG < SRR4302536.65223/94‑1 (MQ=60)
CTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGG < SRR4302536.5321833/94‑1 (MQ=60)
CTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGG < SRR4302536.381255/94‑1 (MQ=60)
CTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGG < SRR4302536.747676/94‑1 (MQ=60)
CTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGG > SRR4302536.5704378/1‑94 (MQ=60)
CTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGG < SRR4302536.3532677/94‑1 (MQ=60)
TTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGT < SRR4302536.3278606/94‑1 (MQ=60)
TTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGT < SRR4302536.1824318/94‑1 (MQ=60)
TGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTT < SRR4302536.282302/94‑1 (MQ=60)
TGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTT > SRR4302536.3594607/1‑94 (MQ=60)
TGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTT > SRR4302536.60250/1‑94 (MQ=60)
GTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTT < SRR4302536.2217808/94‑1 (MQ=60)
GTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTT > SRR4302536.6882206/1‑94 (MQ=60)
GTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTT < SRR4302536.4561048/94‑1 (MQ=60)
TCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTT < SRR4302536.1336873/94‑1 (MQ=60)
CAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTT > SRR4302536.4341341/1‑94 (MQ=60)
CAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTT > SRR4302536.5385850/1‑94 (MQ=60)
AAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTG < SRR4302536.5703418/94‑1 (MQ=60)
AAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGC > SRR4302536.5099634/1‑94 (MQ=60)
AAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGC > SRR4302536.5245488/1‑94 (MQ=60)
AATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCA > SRR4302536.3871883/1‑94 (MQ=60)
AATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCA > SRR4302536.3508186/1‑94 (MQ=60)
ATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCAT > SRR4302536.677189/1‑94 (MQ=60)
ATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCAT < SRR4302536.3278334/94‑1 (MQ=60)
ATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCAT > SRR4302536.6425185/1‑94 (MQ=60)
ATACGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGGAACCAACGCCAAAGTCTGGTTTTTGCAT > SRR4302536.3352977/1‑94 (MQ=60)
TATGCTTTCATAACTAGCCCGAAATCACCGCCGGCGGCAACGCAAAGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATT > SRR4302536.3166088/1‑94 (MQ=60)
TATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATT > SRR4302536.5481342/1‑94 (MQ=60)
ATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTT < SRR4302536.109431/94‑1 (MQ=60)
ATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTT < SRR4302536.4176845/94‑1 (MQ=60)
ATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTT > SRR4302536.1276562/1‑94 (MQ=60)
TGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTT < SRR4302536.3680242/94‑1 (MQ=60)
GCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTTAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTT < SRR4302536.3432438/94‑1 (MQ=60)
CTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTT < SRR4302536.1526411/94‑1 (MQ=60)
CTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTT > SRR4302536.208444/1‑94 (MQ=60)
CTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTT < SRR4302536.3322412/94‑1 (MQ=60)
CTTTAATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGACTGGTTTTTGTATTTTTT > SRR4302536.2048824/1‑94 (MQ=60)
TTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGT > SRR4302536.2303107/1‑94 (MQ=60)
TTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGGCTGGGTTTTTCATTTTTTGT > SRR4302536.602224/1‑94 (MQ=60)
TCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTT < SRR4302536.1152157/94‑1 (MQ=60)
CATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTG < SRR4302536.3150150/94‑1 (MQ=60)
ATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGGCAAAGTCTGGTTTTTGCATTTTTTGTTGA > SRR4302536.1874102/1‑94 (MQ=60)
ATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGA > SRR4302536.1997426/1‑94 (MQ=60)
TAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAA > SRR4302536.4466729/1‑94 (MQ=60)
TAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAA > SRR4302536.5078837/1‑94 (MQ=60)
TAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAA < SRR4302536.791593/94‑1 (MQ=60)
AACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAG > SRR4302536.2265453/1‑94 (MQ=60)
AACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAG < SRR4302536.2231674/94‑1 (MQ=60)
AACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAG < SRR4302536.5673819/94‑1 (MQ=60)
AACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAG < SRR4302536.3096766/94‑1 (MQ=60)
AACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAG > SRR4302536.4224366/1‑94 (MQ=60)
ACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGT < SRR4302536.2915007/94‑1 (MQ=60)
ACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGT < SRR4302536.3709960/94‑1 (MQ=60)
ACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTGTTTGCATTTTTTGTTGAAGT < SRR4302536.6733328/94‑1 (MQ=60)
CTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTG < SRR4302536.5089163/94‑1 (MQ=60)
CTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTG > SRR4302536.2407686/1‑94 (MQ=60)
CTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTG < SRR4302536.6424790/94‑1 (MQ=60)
CTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTG > SRR4302536.4106184/1‑94 (MQ=60)
CTAGCCCGAAACCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTG < SRR4302536.6618179/94‑1 (MQ=60)
TAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGC > SRR4302536.1927998/1‑94 (MQ=60)
TAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGC > SRR4302536.4236970/1‑94 (MQ=60)
GCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGT > SRR4302536.1050867/1‑94 (MQ=60)
CCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTG > SRR4302536.4801035/1‑94 (MQ=60)
CCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTG > SRR4302536.6025230/1‑94 (MQ=60)
CCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGGTTTTGCATTTTTTGTTGAAGTGCGTG > SRR4302536.295879/1‑94 (MQ=60)
CGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAG < SRR4302536.5058580/94‑1 (MQ=60)
CGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAG < SRR4302536.2921325/94‑1 (MQ=60)
CGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAG < SRR4302536.4162581/94‑1 (MQ=60)
GAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGA > SRR4302536.5612070/1‑94 (MQ=60)
GAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGA > SRR4302536.1369229/1‑94 (MQ=60)
AAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAA < SRR4302536.186500/94‑1 (MQ=60)
AATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAA < SRR4302536.4839005/94‑1 (MQ=60)
AATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAA > SRR4302536.1425688/1‑94 (MQ=60)
ATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAGCGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAAT < SRR4302536.2670512/94‑1 (MQ=60)
ATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGACAT > SRR4302536.790925/1‑94 (MQ=60)
ATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAAT < SRR4302536.1279595/94‑1 (MQ=60)
ATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAAT < SRR4302536.44033/94‑1 (MQ=60)
ATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAAT > SRR4302536.2167329/1‑94 (MQ=60)
CACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGACATTT > SRR4302536.2224216/1‑94 (MQ=60)
CACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTT < SRR4302536.3334547/94‑1 (MQ=60)
CACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTT < SRR4302536.6808179/94‑1 (MQ=60)
CCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTT < SRR4302536.3635344/94‑1 (MQ=60)
CCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTT > SRR4302536.73044/1‑94 (MQ=60)
CGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTC > SRR4302536.3665955/1‑94 (MQ=60)
GCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCA < SRR4302536.5687238/94‑1 (MQ=60)
CAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAG > SRR4302536.1021465/1‑94 (MQ=60)
CAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAG > SRR4302536.897623/1‑94 (MQ=60)
CAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAG < SRR4302536.3902122/94‑1 (MQ=60)
AGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGC > SRR4302536.1462059/1‑94 (MQ=60)
AGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGC < SRR4302536.2280233/94‑1 (MQ=60)
AGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGC > SRR4302536.2773361/1‑94 (MQ=60)
AGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGC > SRR4302536.4941068/1‑94 (MQ=60)
GGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCT > SRR4302536.1847059/1‑94 (MQ=60)
GGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCT < SRR4302536.1305565/94‑1 (MQ=60)
GGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCT < SRR4302536.6442394/94‑1 (MQ=60)
GCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCTG < SRR4302536.2516301/94‑1 (MQ=60)
CGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCTGA < SRR4302536.2118642/94‑1 (MQ=60)
CGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCTGA > SRR4302536.2254368/1‑94 (MQ=60)
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ATCCACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCAGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCTGA > NC_000913/4219341‑4219526
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
