Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I2 R1	1475	266.7	13469680	98.2%	13227225	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,227,795	A→G	intergenic (‑74/‑138)	pepE ← / → yjbC	peptidase E/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,227,795	0	A	G	99.6%	819.4 / NA	257	intergenic (‑74/‑138)	pepE/yjbC	peptidase E/hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (101/154); total (103/154)
Fisher's exact test for biased strand distribution p-value = 3.98e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 283 total aligned reads displayed.

AATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCACGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTATTT  >  NC_000913/4227705‑4227884

aaTAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTcgcg                                                                                         >  1:6495017/1‑93 (MQ=255)

    aaaGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGt                                                                                     <  2:1641668/93‑1 (MQ=255)

    aaaGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGt                                                                                     <  1:5915662/93‑1 (MQ=255)

      aGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCg                                                                                   >  1:4467794/1‑93 (MQ=255)

      aGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGATCGCGCTGTCg                                                                                   >  1:170620/1‑93 (MQ=255)

       gCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGgcgc                                                                                  >  1:5195950/1‑93 (MQ=255)

        cAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGca                                                                                 <  1:1065004/93‑1 (MQ=255)

         aGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGcac                                                                                >  2:3957901/1‑93 (MQ=255)

          gTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGcaca                                                                               >  1:814668/1‑93 (MQ=255)

           ttCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACAt                                                                              >  1:6022031/1‑93 (MQ=255)

           ttCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACAt                                                                              <  1:4232280/93‑1 (MQ=255)

            tCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACAtt                                                                             <  1:1414430/93‑1 (MQ=255)

            tCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACAtt                                                                             <  1:5146318/93‑1 (MQ=255)

            tCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACAtt                                                                             <  2:434234/93‑1 (MQ=255)

            tCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACAtt                                                                             <  1:1221868/93‑1 (MQ=255)

             ccATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACAttt                                                                            >  2:3699794/1‑92 (MQ=255)

              cATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGc                                                                           <  1:6523347/93‑1 (MQ=255)

               aTTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGGACATTGCt                                                                          >  1:6218012/1‑93 (MQ=255)

               aTTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCt                                                                          <  2:1508859/93‑1 (MQ=255)

                ttACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCtt                                                                         >  2:5910246/1‑93 (MQ=255)

                 tACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTc                                                                        <  2:6212880/93‑1 (MQ=255)

                 tACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTc                                                                        <  1:3011091/93‑1 (MQ=255)

                  aCTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCt                                                                       >  1:6144781/1‑93 (MQ=255)

                   cTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTg                                                                      >  1:2807450/1‑93 (MQ=255)

                   cTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTg                                                                      >  2:5028961/1‑93 (MQ=255)

                   cTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTg                                                                      >  2:2053863/1‑93 (MQ=255)

                    ttCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTgg                                                                     >  1:6609843/1‑93 (MQ=255)

                    ttCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTgg                                                                     >  1:59664/1‑93 (MQ=255)

                       tcCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTTGaaa                                                                  >  2:6531266/1‑93 (MQ=255)

                       tcCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGaaa                                                                  >  2:5782826/1‑93 (MQ=255)

                       tcCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGaaa                                                                  >  2:5501791/1‑93 (MQ=255)

                       tcCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACACTGCTTCTGGaaa                                                                  >  2:6465011/1‑93 (MQ=255)

                        ccGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAg                                                                 <  1:246690/93‑1 (MQ=255)

                        ccGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAg                                                                 <  2:115207/93‑1 (MQ=255)

                         cGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGt                                                                <  1:3851280/93‑1 (MQ=255)

                         cGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGt                                                                <  1:500201/93‑1 (MQ=255)

                           gTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTTGAAAgacg                                                              >  1:1740517/1‑90 (MQ=255)

                           gTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGa                                                              >  2:1103730/1‑93 (MQ=255)

                           gTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGa                                                              <  2:3472308/93‑1 (MQ=255)

                           gTTACTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGa                                                              <  1:4952608/93‑1 (MQ=255)

                            ttAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGAt                                                             <  1:4268985/93‑1 (MQ=255)

                            ttAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGAt                                                             <  1:10113/93‑1 (MQ=255)

                             tAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGAtt                                                            <  1:2112580/93‑1 (MQ=255)

                              aGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGAttt                                                           <  2:6390421/93‑1 (MQ=255)

                               gTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTg                                                          >  1:6353889/1‑93 (MQ=255)

                                  aGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGc                                                       <  1:4763807/93‑1 (MQ=255)

                                  aGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGc                                                       >  2:3068583/1‑93 (MQ=255)

                                   gAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCa                                                      >  1:3160439/1‑93 (MQ=255)

                                     aaTCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAgg                                                    >  2:4122309/1‑93 (MQ=255)

                                       tCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTa                                                  <  1:5462506/93‑1 (MQ=255)

                                         aCGGTAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAAc                                                <  1:2067668/93‑1 (MQ=255)

                                          cGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACg                                               >  2:6057675/1‑93 (MQ=255)

                                            ggAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGaa                                             >  1:5695010/1‑93 (MQ=255)

                                            ggAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGaa                                             >  2:325893/1‑93 (MQ=255)

                                            ggAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGaa                                             <  2:3725740/93‑1 (MQ=255)

                                            ggAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGaa                                             <  2:6671754/93‑1 (MQ=255)

                                              aGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGGAACGAAtt                                           >  2:4823537/1‑93 (MQ=255)

                                              aGGCATGCCACCACTGCGAATTTAACCACTCACTGACATGGCTCGCGATGTCACACATTGCTGCTGGAAAGTGATTTGAGCAGGTAACGAAtt                                           <  1:2589906/93‑1 (MQ=255)

                                               ggCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTc                                          >  2:3148878/1‑93 (MQ=255)

                                                 cATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCaa                                        <  1:1401482/93‑1 (MQ=255)

                                                 cATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCaa                                        <  2:4463042/93‑1 (MQ=255)

                                                 cATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCaa                                        <  1:2342301/93‑1 (MQ=255)

                                                  aTGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAg                                       >  2:2230070/1‑93 (MQ=255)

                                                  aTGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAg                                       >  1:5336326/1‑93 (MQ=255)

                                                  aTGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGGAAAGAATTCAAg                                       >  1:4926666/1‑93 (MQ=255)

                                                   tGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGc                                      >  2:2298103/1‑93 (MQ=255)

                                                    gCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGcc                                     >  1:112094/1‑93 (MQ=255)

                                                    gCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGcc                                     <  2:5592846/93‑1 (MQ=255)

                                                     cTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCa                                    >  2:3819164/1‑93 (MQ=255)

                                                     cTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCa                                    >  1:6166786/1‑93 (MQ=255)

                                                      tACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCaa                                   <  1:5728926/93‑1 (MQ=255)

                                                      tACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCaa                                   >  1:2713468/1‑93 (MQ=255)

                                                       acgaCTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAAt                                  <  1:4026113/90‑1 (MQ=255)

                                                       aCCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAAt                                  <  2:2253736/93‑1 (MQ=255)

                                                       aCCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAAt                                  <  1:18652/93‑1 (MQ=255)

                                                       aCCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAAt                                  >  1:4412525/1‑93 (MQ=255)

                                                        ccACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATg                                 >  2:6280230/1‑93 (MQ=255)

                                                        ccACTGCGAATTTAACCACTTACGGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATg                                 <  1:1636838/93‑1 (MQ=255)

                                                         cACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATgg                                <  2:4887533/93‑1 (MQ=255)

                                                          ccTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGa                               <  2:464587/92‑1 (MQ=255)

                                                          aCTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGa                               <  2:6699428/93‑1 (MQ=255)

                                                               gAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATaa                          <  1:3378406/93‑1 (MQ=255)

                                                               aaaTTTACCCACTTACTGACATGCTTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGAAGGTAACGAATTCAAGCCAATGGAAATaa                          <  1:3515072/92‑1 (MQ=255)

                                                                  tttAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACaa                       <  1:89096/93‑1 (MQ=255)

                                                                   ttAACCCCTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACaaa                      <  1:3541623/93‑1 (MQ=255)

                                                                   ttAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACaaa                      <  2:5799127/93‑1 (MQ=255)

                                                                    tAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAAt                     <  1:6423732/93‑1 (MQ=255)

                                                                     aaCCACTTGCTGACATGCCTCACGCTGTCGCACATTGCTTCTGAAAAGTAATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATa                    <  1:6395420/93‑1 (MQ=255)

                                                                     aaCCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATa                    <  2:2580637/93‑1 (MQ=255)

                                                                     aaCCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATa                    <  2:1845210/93‑1 (MQ=255)

                                                                       ccACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACCAATAGt                  >  1:3096818/1‑93 (MQ=255)

                                                                       ccACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGt                  <  1:1270338/93‑1 (MQ=255)

                                                                         ccTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTc                <  1:2732189/92‑1 (MQ=255)

                                                                          cTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGGAACGAATTCAAGCCAATGGAAATAACAAATAGTTCg               >  2:5669955/1‑93 (MQ=255)

                                                                             acggACGTGGCTCGCAATGTCACACATTGCTTCTGGAAAGTGATTGGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTc            <  2:5086612/90‑1 (MQ=255)

                                                                              cTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTTATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCa           <  1:4666710/93‑1 (MQ=255)

                                                                                gACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGGGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATg         <  2:2694740/93‑1 (MQ=255)

                                                                                  cATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGAc       >  1:508672/1‑93 (MQ=255)

                                                                                   aTGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACt      >  1:686759/1‑93 (MQ=255)

                                                                                   aTGGCTCGCGATGTCGCACATTGCTTCTGAAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACt      <  2:2794782/93‑1 (MQ=255)

AATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCACGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTATTT  >  NC_000913/4227705‑4227884

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CTCAATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCACGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTTCGCTCATGACTATTTTTTA  >  NC_000913/4227702‑4227888

CTCAATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCG                                                                                                 >  SRR4302536.5611597/1‑94 (MQ=60)

CTCAATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCG                                                                                                 <  SRR4302536.5131712/94‑1 (MQ=60)

CTCAATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCC                                                                                                 >  SRR4302536.2879691/1‑94 (MQ=60)

 TCAATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGC                                                                                                <  SRR4302536.2696406/94‑1 (MQ=60)

 ACAATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGC                                                                                                >  SRR4302536.3541352/1‑94 (MQ=60)

  CAATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCG                                                                                               >  SRR4302536.6608033/1‑94 (MQ=60)

  CAATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCG                                                                                               >  SRR4302536.6688662/1‑94 (MQ=60)

  CAATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCG                                                                                               <  SRR4302536.5169450/94‑1 (MQ=60)

     TAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATG                                                                                            <  SRR4302536.1409142/94‑1 (MQ=60)

       AAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTC                                                                                          <  SRR4302536.4512718/94‑1 (MQ=60)

       AAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTC                                                                                          <  SRR4302536.6091869/94‑1 (MQ=60)

        AAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG                                                                                         >  SRR4302536.4602007/1‑94 (MQ=60)

        AAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGATCGCGCTGTCG                                                                                         >  SRR4302536.175070/1‑94 (MQ=60)

         AGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑C                                                                                       >  SRR4302536.1124986/1‑94 (MQ=60)

         AGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑C                                                                                       >  SRR4302536.6390325/1‑94 (MQ=60)

         AGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGGCG‑C                                                                                       >  SRR4302536.5350873/1‑94 (MQ=60)

         AGCAGTTCCATTACTTCCCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑C                                                                                       <  SRR4302536.267164/94‑1 (MQ=60)

          GCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CA                                                                                      >  SRR4302536.2150434/1‑94 (MQ=60)

           CAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CAC                                                                                     <  SRR4302536.1096849/94‑1 (MQ=60)

            AGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACA                                                                                    >  SRR4302536.5119977/1‑94 (MQ=60)

            AGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACA                                                                                    >  SRR4302536.838566/1‑94 (MQ=60)

             GTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACAT                                                                                   >  SRR4302536.6201580/1‑94 (MQ=60)

              TTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATT                                                                                  <  SRR4302536.4358223/94‑1 (MQ=60)

               TCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTG                                                                                 <  SRR4302536.1258574/94‑1 (MQ=60)

               TCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTG                                                                                 <  SRR4302536.5299898/94‑1 (MQ=60)

               TCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTG                                                                                 <  SRR4302536.1456477/94‑1 (MQ=60)

               TCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTG                                                                                 <  SRR4302536.614895/94‑1 (MQ=60)

                CCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGC                                                                                >  SRR4302536.128339/1‑94 (MQ=60)

                 CATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑GACATTGCT                                                                               >  SRR4302536.6403302/1‑94 (MQ=60)

                 CATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCT                                                                               >  SRR4302536.6578990/1‑94 (MQ=60)

                 CATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCT                                                                               <  SRR4302536.6717669/94‑1 (MQ=60)

                   TTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTC                                                                             <  SRR4302536.6256888/94‑1 (MQ=60)

                   TTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTC                                                                             <  SRR4302536.4192726/94‑1 (MQ=60)

                   TTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTC                                                                             <  SRR4302536.1144357/94‑1 (MQ=60)

                    TACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCT                                                                            >  SRR4302536.6327868/1‑94 (MQ=60)

                    TACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCT                                                                            <  SRR4302536.3099597/94‑1 (MQ=60)

                    TACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCT                                                                            <  SRR4302536.5812372/94‑1 (MQ=60)

                    TACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCT                                                                            <  SRR4302536.3099596/94‑1 (MQ=60)

                    TACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCT                                                                            <  SRR4302536.2400859/94‑1 (MQ=60)

                     ACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTG                                                                           >  SRR4302536.5289352/1‑94 (MQ=60)

                     ACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTG                                                                           >  SRR4302536.2890696/1‑94 (MQ=60)

                      CTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGG                                                                          >  SRR4302536.6806391/1‑94 (MQ=60)

                      CTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGG                                                                          >  SRR4302536.61312/1‑94 (MQ=60)

                      CTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGG                                                                          <  SRR4302536.858676/94‑1 (MQ=60)

                          cacgcatagtaagaattcacggaaagctcaccaacacagagaatctaacccctaaaTGACATGGCTCAAGATGTCG‑CACATTGCTTCTGGAAAG                                                                      <  SRR4302536.2218084/38‑1 (MQ=60)

                           CCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGT                                                                     <  SRR4302536.253269/94‑1 (MQ=60)

                           CCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGT                                                                     <  SRR4302536.1892828/94‑1 (MQ=60)

                            CGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTG                                                                    <  SRR4302536.3965928/94‑1 (MQ=60)

                            CGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTG                                                                    <  SRR4302536.2636644/94‑1 (MQ=60)

                            CGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTG                                                                    <  SRR4302536.3242236/94‑1 (MQ=60)

                            CGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTG                                                                    <  SRR4302536.513093/94‑1 (MQ=60)

                            CGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTG                                                                    <  SRR4302536.3138712/94‑1 (MQ=60)

                             GGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTTGAAAGacg                                                                   >  SRR4302536.1790785/1‑91 (MQ=60)

                              GTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGAT                                                                  <  SRR4302536.6916782/94‑1 (MQ=60)

                              GTTACTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGAT                                                                  <  SRR4302536.5101401/94‑1 (MQ=60)

                               TTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATT                                                                 <  SRR4302536.5906823/94‑1 (MQ=60)

                               TTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATT                                                                 <  SRR4302536.4396223/94‑1 (MQ=60)

                               TTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATT                                                                 <  SRR4302536.3019881/94‑1 (MQ=60)

                               TTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATT                                                                 <  SRR4302536.5309625/94‑1 (MQ=60)

                               TTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATT                                                                 <  SRR4302536.10397/94‑1 (MQ=60)

                                TAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTT                                                                >  SRR4302536.6101885/1‑94 (MQ=60)

                                TAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTT                                                                <  SRR4302536.2176069/94‑1 (MQ=60)

                                 AGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTG                                                               >  SRR4302536.6543180/1‑94 (MQ=60)

                                 AGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTG                                                               >  SRR4302536.1157522/1‑94 (MQ=60)

                                 AGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTG                                                               >  SRR4302536.6339839/1‑94 (MQ=60)

                                  GTAAGAAATCACGGGCGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGGTGTGG‑GACATTGCCTCTGGAAAGaggcttgg                                                              >  SRR4302536.878768/1‑86 (MQ=60)

                                  GTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGA                                                              <  SRR4302536.1766809/94‑1 (MQ=60)

                                    AAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGGAAGTGATTTTAGC                                                            >  SRR4302536.5387515/1‑94 (MQ=60)

                                     AGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCA                                                           <  SRR4302536.4907266/94‑1 (MQ=60)

                                     AGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCA                                                           >  SRR4302536.3253021/1‑94 (MQ=60)

                                      GAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGGTGTGG‑CACCTTGCTTTTGGAAATGGATTTCAGCAG                                                          >  SRR4302536.5509261/1‑94 (MQ=60)

                                      GAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAG                                                          <  SRR4302536.909220/94‑1 (MQ=60)

                                        AATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGT                                                        <  SRR4302536.6102555/94‑1 (MQ=60)

                                         ATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTA                                                       <  SRR4302536.1715320/94‑1 (MQ=60)

                                          TCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAA                                                      <  SRR4302536.1278961/94‑1 (MQ=60)

                                          TCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAA                                                      <  SRR4302536.5625788/94‑1 (MQ=60)

                                          TCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAA                                                      <  SRR4302536.4737813/94‑1 (MQ=60)

                                           CACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAAC                                                     <  SRR4302536.615065/94‑1 (MQ=60)

                                           CACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAAC                                                     <  SRR4302536.1096803/94‑1 (MQ=60)

                                            ACGGTAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACG                                                    <  SRR4302536.2129955/94‑1 (MQ=60)

                                            ACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACG                                                    >  SRR4302536.6587007/1‑94 (MQ=60)

                                             CGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGA                                                   >  SRR4302536.518493/1‑94 (MQ=60)

                                             CGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGA                                                   >  SRR4302536.6580329/1‑94 (MQ=60)

                                              GGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑GACAACGCTTCCGTGAAGTGATTTGAGCAGGCAACGAA                                                  >  SRR4302536.1316469/1‑94 (MQ=60)

                                              GGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAA                                                  >  SRR4302536.5864342/1‑94 (MQ=60)

                                                GAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATT                                                <  SRR4302536.6259051/94‑1 (MQ=60)

                                                GAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCACGATGTCG‑CACATTGCTTCTGGACAGTGACTTGAGCAGGGAACGAATT                                                >  SRR4302536.2824064/1‑94 (MQ=60)

                                                 AGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CCCATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTC                                               >  SRR4302536.788479/1‑94 (MQ=60)

                                                 AGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTTAGCAGGTAACGAATTC                                               >  SRR4302536.1202683/1‑94 (MQ=60)

                                                 AGGCATGCCACCACTGCGAATTTAACCACTCACTGACATGGCTCGCGATGTCA‑CACATTGCTGCTGGAAAGTGATTTGAGCAGGTAACGAATTC                                               <  SRR4302536.2667687/94‑1 (MQ=60)

                                                    CATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTTG‑CACATTGCTTTTTGGAAGTGACTTGAGCAGGTAAacaattcaaa                                            >  SRR4302536.5357833/1‑84 (MQ=60)

                                                    CATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG                                            <  SRR4302536.1443174/94‑1 (MQ=60)

                                                    CATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG                                            <  SRR4302536.826368/94‑1 (MQ=60)

                                                    CATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG                                            >  SRR4302536.5495772/1‑94 (MQ=60)

                                                    CATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG                                            <  SRR4302536.4999734/94‑1 (MQ=60)

                                                    CATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG                                            <  SRR4302536.2413345/94‑1 (MQ=60)

                                                    CATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGGAAAGAATTCAAG                                            >  SRR4302536.5074701/1‑94 (MQ=60)

                                                     ATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGTAAGGGATTTGAGCAGGTAACGAATTCAAG‑C                                          >  SRR4302536.2585309/1‑94 (MQ=60)

                                                     ATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑C                                          >  SRR4302536.2794503/1‑94 (MQ=60)

                                                     ATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑C                                          <  SRR4302536.4101744/94‑1 (MQ=60)

                                                      TGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CC                                         >  SRR4302536.115063/1‑94 (MQ=60)

                                                      TGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CC                                         <  SRR4302536.4398806/94‑1 (MQ=60)

                                                       GCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCA                                        >  SRR4302536.6350469/1‑94 (MQ=60)

                                                       GCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCA                                        >  SRR4302536.5147771/1‑94 (MQ=60)

                                                        CTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAA                                       >  SRR4302536.2794407/1‑94 (MQ=60)

                                                        CTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAA                                       >  SRR4302536.5079928/1‑94 (MQ=60)

                                                        CTACCACTGCGAATTTAACCACTTACTGACATCGCTCACGATGTCGACAC‑TTGCTTCTTGATAGTGATTTGAGCACGTAAAGAACTCAAGACCA                                        >  SRR4302536.154880/1‑94 (MQ=44)

                                                         TACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAAT                                      >  SRR4302536.2391401/1‑94 (MQ=60)

                                                         TACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAAT                                      <  SRR4302536.6783797/94‑1 (MQ=60)

                                                         TACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAAT                                      >  SRR4302536.5917168/1‑94 (MQ=60)

                                                         TACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAAT                                      <  SRR4302536.5899317/94‑1 (MQ=60)

                                                         TACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAAT                                      >  SRR4302536.4544566/1‑94 (MQ=60)

                                                          cgcgCTGCGAATTTAACCACTTACTGACATGGCTCGCGAGTTCG‑CGCATTGCTTCTTGAAAGTCATTTGAGCAGGTAACGAATTCAAG‑CCAATG                                     <  SRR4302536.3454136/90‑1 (MQ=60)

                                                          ACGACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATG                                     <  SRR4302536.4145535/94‑1 (MQ=60)

                                                          ACCACTGCGAATTTACCCTCTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGTTAACGAATTCAAG‑CCAATG                                     <  SRR4302536.5580365/94‑1 (MQ=60)

                                                          ACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATG                                     <  SRR4302536.3832846/94‑1 (MQ=60)

                                                          ACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATG                                     <  SRR4302536.19168/94‑1 (MQ=60)

                                                           CCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGG                                    <  SRR4302536.5618502/94‑1 (MQ=60)

                                                           CCACTGCGAATTTAACCACTTACGGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGG                                    <  SRR4302536.1684494/94‑1 (MQ=60)

                                                            CACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGA                                   <  SRR4302536.6686579/94‑1 (MQ=60)

                                                            CACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTCGTTCTGGAAAGTAATTAGAGCAGGTAACAAATTCAAG‑CCAATGGA                                   <  SRR4302536.1080633/94‑1 (MQ=60)

                                                             ACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAA                                  >  SRR4302536.4702166/1‑94 (MQ=60)

                                                              CTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAA                                 <  SRR4302536.1624037/94‑1 (MQ=60)

                                                              CTGCGAATTTAACCACTTACTGACATGGCTCCCGCTGTCG‑CAGATTGCTTCTGGAACGTGAGTTTAGCAGGTAACGAATTCAAG‑CCCATGGAAA                                 >  SRR4302536.6698277/1‑94 (MQ=60)

                                                               TGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAAT                                <  SRR4302536.453438/94‑1 (MQ=60)

                                                               TGCAAATTCAGCCACTTACTGACATGGCTCGCGATGTCG‑CGCATTGTTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAAT                                <  SRR4302536.5019773/94‑1 (MQ=60)

                                                                GCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATA                               <  SRR4302536.3628107/94‑1 (MQ=60)

                                                                  GAATTTACCCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAAC                             <  SRR4302536.3916216/94‑1 (MQ=60)

                                                                  GAATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAAC                             <  SRR4302536.3478801/94‑1 (MQ=60)

                                                                  AAATTTACCCACTTACTGACATGCTTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGAAGGTAACGAATTCAAG‑CCAATGGAAATAAC                             <  SRR4302536.3620039/94‑1 (MQ=60)

                                                                    ATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACTAATTCAAG‑CCAATGGAAATAACAA                           >  SRR4302536.6788225/1‑94 (MQ=60)

                                                                    ATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAA                           >  SRR4302536.2904475/1‑94 (MQ=60)

                                                                    ATTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGGAACGAATTCAAG‑CCAATGGAAATAAAAA                           >  SRR4302536.4825573/1‑94 (MQ=60)

                                                                     TTTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAA                          <  SRR4302536.91476/94‑1 (MQ=60)

                                                                      TTAACCCCTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAAT                         <  SRR4302536.3647521/94‑1 (MQ=60)

                                                                      TTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAAT                         <  SRR4302536.1672280/94‑1 (MQ=60)

                                                                      TTAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAAT                         <  SRR4302536.5089192/94‑1 (MQ=60)

                                                                       TAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAATTA                        <  SRR4302536.3574600/94‑1 (MQ=60)

                                                                       TAACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATA                        <  SRR4302536.6615735/94‑1 (MQ=60)

                                                                        AACCACTTGCTGACATGCCTCACGCTGTCG‑CACATTGCTTCTGAAAAGTAATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAG                       <  SRR4302536.6586269/94‑1 (MQ=60)

                                                                        AACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGTAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAG                       >  SRR4302536.4364784/1‑94 (MQ=60)

                                                                        AACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAG                       <  SRR4302536.4249203/94‑1 (MQ=60)

                                                                        AACCACTTACTGACATGGCTCCCGATGTCG‑CACATTGCTTCTGGTAAGGGGTTTTTGCAGGTAACGAGTTCAAG‑Caatttgaaataactattac                       >  SRR4302536.1890457/1‑75 (MQ=41)

                                                                         ACCACTTCCTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGT                      <  SRR4302536.1693328/94‑1 (MQ=60)

                                                                         ACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACCAATAGT                      >  SRR4302536.3187274/1‑94 (MQ=60)

                                                                         ACCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGT                      >  SRR4302536.1774056/1‑94 (MQ=60)

                                                                         ACCACTTACTGACATGGCGCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGT                      <  SRR4302536.1990869/94‑1 (MQ=60)

                                                                          CCACTTACTGACGTGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTT                     <  SRR4302536.3996235/94‑1 (MQ=60)

                                                                          CCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTT                     >  SRR4302536.4371611/1‑94 (MQ=60)

                                                                          CCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTT                     <  SRR4302536.6491379/94‑1 (MQ=60)

                                                                          CCACTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTT                     <  SRR4302536.1308396/94‑1 (MQ=60)

                                                                            CCTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTTCG                   <  SRR4302536.2813620/94‑1 (MQ=60)

                                                                             CTTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTTCGC                  >  SRR4302536.4891773/1‑94 (MQ=60)

                                                                              TTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTTCGCT                 >  SRR4302536.3189912/1‑94 (MQ=60)

                                                                              TTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTTCGCT                 <  SRR4302536.5869989/94‑1 (MQ=60)

                                                                              TTACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTTCGCT                 >  SRR4302536.6671491/1‑94 (MQ=60)

                                                                                ACTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTTCGCTCA               <  SRR4302536.6346633/94‑1 (MQ=60)

                                                                                 CTGACATTGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTTCGCTCAT              <  SRR4302536.27931/94‑1 (MQ=60)

                                                                                 CTGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTTATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTTCGCTCAT              <  SRR4302536.4807028/94‑1 (MQ=60)

                                                                                 CTGACATGGCTCGCGATGTCG‑CAAATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTTCGCTCAT              >  SRR4302536.3501522/1‑94 (MQ=60)

                                                                                  TGACATGNCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑NNANNNNANATAACAAATAnnnngnntntg             >  SRR4302536.1458746/1‑83 (MQ=60)

                                                                                  TGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTTCGCTCATG             <  SRR4302536.1857357/94‑1 (MQ=60)

                                                                                  TGACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTTCGCTCATG             <  SRR4302536.5279950/94‑1 (MQ=60)

                                                                                   GACGTGGCTCTCGATGTGG‑CACTTTGCTTCTGGAAAGTGATTTGAGCAGTTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTTCGCTCATGA            <  SRR4302536.2783453/94‑1 (MQ=60)

                                                                                    ACATGTCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTTCGCTCATGAC           <  SRR4302536.2520945/94‑1 (MQ=60)

                                                                                    ACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTTCGCTCATGAC           <  SRR4302536.5302085/94‑1 (MQ=60)

                                                                                    ACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTTCGCTCATGAC           >  SRR4302536.521718/1‑94 (MQ=60)

                                                                                    ACATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTTCGCTCATGAC           >  SRR4302536.3309309/1‑94 (MQ=60)

                                                                                     CATGGCTCGCGCTGTCG‑CACATTGCTTCTGGAAAGCGATTTAAGCAGGGAACGAATTCTAG‑CCAATGGAActacaaaaagatgtccctatgcgt          >  SRR4302536.3279719/1‑70 (MQ=44)

                                                                                     CATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTTCGCTCATGACT          <  SRR4302536.2424403/94‑1 (MQ=60)

                                                                                     CATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTTCGCTCATGACT          >  SRR4302536.565219/1‑94 (MQ=60)

                                                                                     CATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTTCGCTCATGACT          >  SRR4302536.706863/1‑94 (MQ=60)

                                                                                     CATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTTCGCTCATGACT          <  SRR4302536.3296836/94‑1 (MQ=60)

                                                                                     CATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTTCGCTCATGACT          <  SRR4302536.1925381/94‑1 (MQ=60)

                                                                                      ATGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTTCGCTCATGACTA         >  SRR4302536.683879/1‑94 (MQ=60)

                                                                                       TGGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTTAGCTCATGACTAT        >  SRR4302536.1450130/1‑94 (MQ=60)

                                                                                       TGGCTCGCGATGTCG‑CACATTGATTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑ACCATGGAAATAAAAAATAGGTCGCTCATGACTAT        >  SRR4302536.4460954/1‑94 (MQ=60)

                                                                                        GGCTCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTTCGCTCATGACTATT       >  SRR4302536.6466146/1‑94 (MQ=60)

                                                                                           TCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTTCGCTCATGACTATTTTT    >  SRR4302536.2430584/1‑94 (MQ=60)

                                                                                           TCGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTTCGCTCATGACTATTTTT    <  SRR4302536.943035/94‑1 (MQ=60)

                                                                                            CGCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTTCGCTCATGACTATTTTTT   >  SRR4302536.621256/1‑94 (MQ=60)

                                                                                             GCGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTTCGCTCATGACTATTTTTTA  >  SRR4302536.3329302/1‑94 (MQ=60)

CTCAATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCACGATGTCG‑CACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG‑CCAATGGAAATAACAAATAGTTCGCTCATGACTATTTTTTA  >  NC_000913/4227702‑4227888

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`