Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,093,861	T→C	L8P (CTT→CCT)	yggT →	putative resistance protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,093,861	0	T	C	99.3%	1460.2 / ‑5.2	449	L8P (CTT→CCT)	yggT	putative resistance protein
Reads supporting (aligned to +/- strand): ref base T (3/0); new base C (231/215); total (234/215)
Fisher's exact test for biased strand distribution p-value = 2.50e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 460 total aligned reads displayed.

GTTCGTATCGGCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCTTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACCCCTTCTCAC  >  NC_000913/3093771‑3093950

gTTCGTATCGGCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCctt                                                                                         >  1:9532628/1‑93 (MQ=255)

   tgTATCGCCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGTAACGCCATGAATACGTTGACTTTCCTGCCTTCaa                                                                                      <  1:4355535/92‑1 (MQ=255)

   cGTATCGGCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCaa                                                                                      <  2:2617914/93‑1 (MQ=255)

   cGTATCGGCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCaa                                                                                      >  2:3284595/1‑93 (MQ=255)

    gTATCGGCACTGCAATTTTTGGTGCGCGTGATTCCTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAAc                                                                                     <  2:9422521/93‑1 (MQ=255)

     tATCGGCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACg                                                                                    >  2:7454941/1‑93 (MQ=255)

      aTCGGCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACgg                                                                                   <  2:701993/93‑1 (MQ=255)

      aTCGGCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACgg                                                                                   <  2:3601585/93‑1 (MQ=255)

         ggCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCa                                                                                >  1:8774249/1‑93 (MQ=255)

         ggCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCa                                                                                <  2:6510131/93‑1 (MQ=255)

          gCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCAt                                                                               <  2:1713298/93‑1 (MQ=255)

              tGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAg                                                                           >  1:9743283/1‑93 (MQ=255)

                 aaTTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTg                                                                        <  1:3255847/93‑1 (MQ=255)

                  aTTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGt                                                                       <  2:287545/93‑1 (MQ=255)

                  aTTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGt                                                                       <  1:2295524/93‑1 (MQ=255)

                   tttttGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGta                                                                      <  1:2614267/93‑1 (MQ=255)

                   tttttGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGta                                                                      >  2:2664769/1‑93 (MQ=255)

                     tttGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGtata                                                                    >  2:9807048/1‑93 (MQ=255)

                       tGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATAcc                                                                  <  1:392416/93‑1 (MQ=255)

                          tGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATg                                                               >  2:2326681/1‑93 (MQ=255)

                          tGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATg                                                               <  2:6692535/93‑1 (MQ=255)

                           gcgcGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATgg                                                              <  1:2869372/93‑1 (MQ=255)

                            cgcgTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGt                                                             <  2:4185062/93‑1 (MQ=255)

                              cgTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGACATTGAGCTGTATACCATGGTGc                                                           <  2:2440825/93‑1 (MQ=255)

                                tGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTg                                                         >  2:1621428/1‑93 (MQ=255)

                                tGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTg                                                         >  1:1272594/1‑93 (MQ=255)

                                tGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTg                                                         >  1:4831460/1‑93 (MQ=255)

                                 gATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGt                                                        >  2:9606295/1‑93 (MQ=255)

                                 gATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGt                                                        >  2:6285570/1‑93 (MQ=255)

                                  aTTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGtt                                                       <  1:823702/93‑1 (MQ=255)

                                   ttACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGtta                                                      <  1:4698102/93‑1 (MQ=255)

                                   ttACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGtta                                                      <  1:5033765/93‑1 (MQ=255)

                                   ttACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGtta                                                      <  2:4892508/93‑1 (MQ=255)

                                   ttACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGtta                                                      <  1:249576/93‑1 (MQ=255)

                                    tACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCTTTCAACGGTCATTGAGCTGTATACCATGGTGCTGttat                                                     >  1:5416549/1‑93 (MQ=255)

                                    tACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGttat                                                     >  1:4473578/1‑93 (MQ=255)

                                    tACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGttat                                                     >  2:4377919/1‑93 (MQ=255)

                                    gaCTCTAAAAAATAAGGAACTAAAGGAACTCCATGAATACGTTGACTGTCCAGCCTTCAACGGTCATTGAGCTTTATACTATGGTGCTGttat                                                     >  1:8931094/2‑93 (MQ=255)

                                     aCTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGttatt                                                    >  2:8108439/1‑93 (MQ=255)

                                     aCTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGttatt                                                    <  1:5894381/93‑1 (MQ=255)

                                      ctctAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGttatta                                                   >  1:7332679/1‑93 (MQ=255)

                                      ctctAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGttatta                                                   <  1:7073065/93‑1 (MQ=255)

                                       tctAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTAc                                                  >  2:5660426/1‑93 (MQ=255)

                                       tctAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTAc                                                  <  1:925188/93‑1 (MQ=255)

                                       tctAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTAc                                                  >  2:903846/1‑93 (MQ=255)

                                         tAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGc                                                >  1:203672/1‑93 (MQ=255)

                                            aaaaTAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATc                                             <  2:7748833/93‑1 (MQ=255)

                                            aaaaTAAGGAATTAAAGGAACGCCACGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATc                                             >  2:597630/1‑93 (MQ=255)

                                              aaTAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTg                                           >  1:6651269/1‑93 (MQ=255)

                                              aaTAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTg                                           >  1:3045204/1‑93 (MQ=255)

                                              aaTAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTg                                           >  2:1015085/1‑93 (MQ=255)

                                              aaTAAGGAATTAAAGGAACGCCATGAATACGTTGACTCTGCTGCCTTCAACGGTCAGTGAGCTGTATACCATGGTGCTGTTATTACGCATCTg                                           >  2:5816226/1‑93 (MQ=255)

                                               aTAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTgg                                          <  1:3454063/93‑1 (MQ=255)

                                                  aGGAATGAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATg                                       <  1:4004034/93‑1 (MQ=255)

                                                   ggAATTAAAGGAACGCCATGAATACGTTGACTTGCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGc                                      <  2:8041426/93‑1 (MQ=255)

                                                    gAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCa                                     <  2:1970300/93‑1 (MQ=255)

                                                    gAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCa                                     >  1:4140796/1‑93 (MQ=255)

                                                     aaTTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAg                                    <  1:7692226/93‑1 (MQ=255)

                                                     aaTTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAg                                    >  2:7175836/1‑93 (MQ=255)

                                                     aaTTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAg                                    <  1:5175223/93‑1 (MQ=255)

                                                     aaTTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAg                                    <  1:8152385/93‑1 (MQ=255)

                                                       ttAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTg                                  >  2:9565218/1‑93 (MQ=255)

                                                       ttAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTg                                  >  2:9255922/1‑93 (MQ=255)

                                                       ttAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTg                                  >  2:222889/1‑93 (MQ=255)

                                                       ttAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTg                                  >  1:8511620/1‑93 (MQ=255)

                                                          aaGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGc                               >  1:6429798/1‑93 (MQ=255)

                                                           aGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCt                              >  2:8537494/1‑93 (MQ=255)

                                                           aGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCt                              >  2:5139212/1‑93 (MQ=255)

                                                            ggAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGCGCTGTATACCATGGTGCTGTTATTACGCATCTGGTTGCAGTGGGCTc                             >  1:7757144/1‑93 (MQ=255)

                                                             gAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCa                            <  2:6817829/93‑1 (MQ=255)

                                                              aaCGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCAt                           <  2:5392403/93‑1 (MQ=255)

                                                                cGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATtg                         <  1:3747706/93‑1 (MQ=255)

                                                                 gCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATtgt                        <  2:1203909/93‑1 (MQ=255)

                                                                  ccATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATtgtg                       >  2:8252924/1‑93 (MQ=255)

                                                                  ccATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATtgtg                       >  1:7210682/1‑93 (MQ=255)

                                                                   cATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGa                      <  1:4639772/93‑1 (MQ=255)

                                                                    aTGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGAt                     <  1:6835313/93‑1 (MQ=255)

                                                                    aTGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGAt                     >  2:4704803/1‑93 (MQ=255)

                                                                     tGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGAtt                    <  2:7636075/93‑1 (MQ=255)

                                                                     tGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGAtt                    >  2:7283447/1‑93 (MQ=255)

                                                                     tGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGAtt                    >  1:6302399/1‑93 (MQ=255)

                                                                       aaTACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGAtttt                  >  1:10035598/1‑93 (MQ=255)

                                                                       aaTACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGAtttt                  >  2:3686682/1‑93 (MQ=255)

                                                                         tACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTa                <  1:4131540/93‑1 (MQ=255)

                                                                         tACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTa                >  2:3096017/1‑93 (MQ=255)

                                                                          aCGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTAc               <  1:1481234/93‑1 (MQ=255)

                                                                            gctGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATCCCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACaa             <  1:4248684/91‑1 (MQ=255)

                                                                            gTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACaa             >  2:3811801/1‑93 (MQ=255)

                                                                            gTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACaa             >  1:2226632/1‑93 (MQ=255)

                                                                            gTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACaa             <  1:1710033/93‑1 (MQ=255)

                                                                             ttGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAAc            <  1:9114669/93‑1 (MQ=255)

                                                                             ttGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAAc            <  1:2541516/93‑1 (MQ=255)

                                                                               gACTTTCCTGCCTTCAACGGTCGTTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAAccc          <  2:5284957/93‑1 (MQ=255)

                                                                               gACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAAccc          >  1:862703/1‑93 (MQ=255)

                                                                                 cTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACCCCt        <  2:608766/93‑1 (MQ=255)

                                                                                  tttCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACCCCtt       <  1:8355508/93‑1 (MQ=255)

                                                                                   ttCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACCCCTtc      <  2:8760998/93‑1 (MQ=255)

                                                                                   ttCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACCCCTtc      <  2:5566712/93‑1 (MQ=255)

                                                                                   ttCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACCCCTtc      >  1:5683648/1‑93 (MQ=255)

                                                                                      cTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACCCCTTCTca   >  1:9981168/1‑93 (MQ=255)

GTTCGTATCGGCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCTTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACCCCTTCTCAC  >  NC_000913/3093771‑3093950

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 248 total aligned reads displayed.

ATGGTTCGTATCGGCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCTTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACCCCTTCTCACAGTT  >  NC_000913/3093768‑3093954

tccgatctagcgcttACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCC                                                                                               <  SRR4302540.137177/79‑1 (MQ=60)

ATGGTTCGTATCGGCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCC                                                                                               >  SRR4302540.1285057/1‑94 (MQ=60)

ATGGTTCGTATCGGCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCC                                                                                               >  SRR4302540.5652696/1‑94 (MQ=60)

ATGGTTCGTATCGGCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCC                                                                                               >  SRR4302540.6311927/1‑94 (MQ=60)

ATGGTTCGTATCGGCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCC                                                                                               >  SRR4302540.6242001/1‑94 (MQ=60)

 TGGTTCGTATCGGCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCT                                                                                              <  SRR4302540.7416879/94‑1 (MQ=60)

 TGGTTCGTATCGGCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCT                                                                                              <  SRR4302540.8284449/94‑1 (MQ=60)

 TGGTTCGTATCGGCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCT                                                                                              >  SRR4302540.3430590/1‑94 (MQ=60)

  GGTTCGTATCGGCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTT                                                                                             >  SRR4302540.4901191/1‑94 (MQ=60)

  GGTTCGTATCGGCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTT                                                                                             >  SRR4302540.9645480/1‑94 (MQ=60)

  GGTTCGTATCGGCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTT                                                                                             >  SRR4302540.5182345/1‑94 (MQ=60)

  GGTTCGTATCGGCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTT                                                                                             <  SRR4302540.1867303/94‑1 (MQ=60)

   GTTCGTATCGGCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTC                                                                                            >  SRR4302540.6540611/1‑94 (MQ=60)

      TGTATCGCCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGTAACGCCATGAATACGTTGACTTTCCTGCCTTCAAC                                                                                         <  SRR4302540.4402908/94‑1 (MQ=60)

         ATCGGCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGT                                                                                      >  SRR4302540.9135685/1‑94 (MQ=60)

           CGGCACTGCAATTTTCGGGGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCA                                                                                    <  SRR4302540.8986208/94‑1 (MQ=60)

             GCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATT                                                                                  >  SRR4302540.6198611/1‑94 (MQ=60)

             GCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATT                                                                                  >  SRR4302540.1637796/1‑94 (MQ=60)

             GCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATT                                                                                  >  SRR4302540.4988807/1‑94 (MQ=60)

               ACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGA                                                                                >  SRR4302540.4021402/1‑94 (MQ=60)

               ACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGA                                                                                >  SRR4302540.2975457/1‑94 (MQ=60)

               ACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGA                                                                                >  SRR4302540.2681095/1‑94 (MQ=60)

               ACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGA                                                                                >  SRR4302540.814222/1‑94 (MQ=60)

               ACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGA                                                                                <  SRR4302540.7160069/94‑1 (MQ=60)

                CTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAG                                                                               >  SRR4302540.9857639/1‑94 (MQ=60)

                CTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAG                                                                               >  SRR4302540.9857638/1‑94 (MQ=60)

                CTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAG                                                                               >  SRR4302540.2535362/1‑94 (MQ=60)

                CTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAG                                                                               >  SRR4302540.2535052/1‑94 (MQ=60)

                  GCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCT                                                                             <  SRR4302540.8270913/94‑1 (MQ=60)

                  GCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCT                                                                             <  SRR4302540.4342454/94‑1 (MQ=60)

                   CAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTG                                                                            >  SRR4302540.3244341/1‑94 (MQ=60)

                   CAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTG                                                                            <  SRR4302540.7505733/94‑1 (MQ=60)

                   CAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTG                                                                            <  SRR4302540.7504110/94‑1 (MQ=60)

                    AATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGT                                                                           <  SRR4302540.3836848/94‑1 (MQ=60)

                    AATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGT                                                                           <  SRR4302540.3291335/94‑1 (MQ=60)

                     ATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTA                                                                          <  SRR4302540.2320229/94‑1 (MQ=60)

                     ATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTA                                                                          <  SRR4302540.2103808/94‑1 (MQ=60)

                     ATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTA                                                                          >  SRR4302540.8534636/1‑94 (MQ=60)

                     ATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTA                                                                          >  SRR4302540.10060683/1‑94 (MQ=60)

                     ATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTA                                                                          >  SRR4302540.1905821/1‑94 (MQ=60)

                      TTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTAT                                                                         <  SRR4302540.2642501/94‑1 (MQ=60)

                        TTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGGGCTGTATAC                                                                       <  SRR4302540.8611503/94‑1 (MQ=60)

                          TGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCA                                                                     <  SRR4302540.396479/94‑1 (MQ=60)

                           GGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCAT                                                                    >  SRR4302540.2305775/1‑94 (MQ=60)

                            GTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATG                                                                   <  SRR4302540.3169486/94‑1 (MQ=60)

                            GTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATG                                                                   <  SRR4302540.6407880/94‑1 (MQ=60)

                            GTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATG                                                                   <  SRR4302540.4002964/94‑1 (MQ=60)

                            GTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATG                                                                   <  SRR4302540.1774911/94‑1 (MQ=60)

                            GTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATG                                                                   <  SRR4302540.1774912/94‑1 (MQ=60)

                              GCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGT                                                                 <  SRR4302540.2900529/94‑1 (MQ=60)

                              GCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGT                                                                 <  SRR4302540.8329783/94‑1 (MQ=60)

                               CGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTG                                                                <  SRR4302540.2600111/94‑1 (MQ=60)

                                  GTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTG                                                             <  SRR4302540.6714303/94‑1 (MQ=60)

                                  GTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTG                                                             >  SRR4302540.1041205/1‑94 (MQ=60)

                                  GTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTG                                                             >  SRR4302540.1285700/1‑94 (MQ=60)

                                  GTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTG                                                             >  SRR4302540.4883215/1‑94 (MQ=60)

                                   TGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGT                                                            >  SRR4302540.6918429/1‑94 (MQ=60)

                                   TGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGT                                                            >  SRR4302540.8490545/1‑94 (MQ=60)

                                   TGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGT                                                            <  SRR4302540.8732175/94‑1 (MQ=60)

                                    GATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGCCTTTCCTGCCTTCAACGGTCATTGGGCTGTATACCATGGTGCTGTT                                                           <  SRR4302540.4185022/94‑1 (MQ=60)

                                    GATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTT                                                           <  SRR4302540.4185023/94‑1 (MQ=60)

                                    GATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTT                                                           >  SRR4302540.5061627/1‑94 (MQ=60)

                                     ATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTA                                                          <  SRR4302540.832460/94‑1 (MQ=60)

                                      TTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCTTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTAT                                                         >  SRR4302540.5476112/1‑94 (MQ=60)

                                      TTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTAT                                                         >  SRR4302540.4522101/1‑94 (MQ=60)

                                      TTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTAT                                                         <  SRR4302540.48211/94‑1 (MQ=60)

                                      TTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTAT                                                         <  SRR4302540.4748326/94‑1 (MQ=60)

                                      TTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTAT                                                         <  SRR4302540.5088226/94‑1 (MQ=60)

                                      TTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTAT                                                         <  SRR4302540.251993/94‑1 (MQ=60)

                                       TACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATT                                                        >  SRR4302540.8913433/1‑94 (MQ=60)

                                       TACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATT                                                        <  SRR4302540.9330195/94‑1 (MQ=60)

                                        ACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTA                                                       >  SRR4302540.7414530/1‑94 (MQ=60)

                                        ACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTA                                                       <  SRR4302540.7255120/94‑1 (MQ=60)

                                        ACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTA                                                       <  SRR4302540.5959480/94‑1 (MQ=60)

                                         CTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGTGGCTGTTATTAC                                                      >  SRR4302540.4426958/1‑94 (MQ=60)

                                         CTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTAC                                                      >  SRR4302540.1503197/1‑94 (MQ=60)

                                         CTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTAC                                                      >  SRR4302540.5871767/1‑94 (MQ=60)

                                         CTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTAC                                                      <  SRR4302540.4178748/94‑1 (MQ=60)

                                         CTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTAC                                                      >  SRR4302540.4426957/1‑94 (MQ=60)

                                         CTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTAC                                                      <  SRR4302540.1453239/94‑1 (MQ=60)

                                         CTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTAC                                                      <  SRR4302540.7151757/94‑1 (MQ=60)

                                          TCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACG                                                     <  SRR4302540.934935/94‑1 (MQ=60)

                                          TCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACG                                                     >  SRR4302540.9498990/1‑94 (MQ=60)

                                          TCTAAAAAAAAAGAAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACG                                                     <  SRR4302540.2192345/94‑1 (MQ=60)

                                           CTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCTTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGC                                                    >  SRR4302540.4056716/1‑94 (MQ=60)

                                           CTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGC                                                    >  SRR4302540.205674/1‑94 (MQ=60)

                                           CTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGC                                                    >  SRR4302540.458573/1‑94 (MQ=60)

                                           CTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGC                                                    >  SRR4302540.7342692/1‑94 (MQ=60)

                                           CTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGC                                                    >  SRR4302540.9663334/1‑94 (MQ=60)

                                            TAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCA                                                   >  SRR4302540.4226564/1‑94 (MQ=60)

                                            TAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCA                                                   >  SRR4302540.4226562/1‑94 (MQ=60)

                                            TAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCA                                                   >  SRR4302540.2592381/1‑94 (MQ=60)

                                            TAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGGTATTACGCT                                                   >  SRR4302540.4226560/1‑94 (MQ=60)

                                             AAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCAT                                                  <  SRR4302540.3821576/94‑1 (MQ=60)

                                             AAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCAT                                                  <  SRR4302540.2050778/94‑1 (MQ=60)

                                               AAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCT                                                >  SRR4302540.1454709/1‑94 (MQ=60)

                                                AAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTG                                               >  SRR4302540.6724842/1‑94 (MQ=60)

                                                AAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTG                                               <  SRR4302540.9412308/94‑1 (MQ=60)

                                                AAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTG                                               >  SRR4302540.3657764/1‑94 (MQ=60)

                                                AAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTG                                               >  SRR4302540.3657766/1‑94 (MQ=60)

                                                AAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTG                                               <  SRR4302540.8274700/94‑1 (MQ=60)

                                                AAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTG                                               <  SRR4302540.878984/94‑1 (MQ=60)

                                                AAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTG                                               >  SRR4302540.7052769/1‑94 (MQ=60)

                                                AAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTG                                               <  SRR4302540.6815595/94‑1 (MQ=60)

                                                 AATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGG                                              <  SRR4302540.2741502/94‑1 (MQ=60)

                                                 AATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGG                                              >  SRR4302540.7667908/1‑94 (MQ=60)

                                                  ATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGA                                             >  SRR4302540.8861968/1‑94 (MQ=60)

                                                  ATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGA                                             <  SRR4302540.3491648/94‑1 (MQ=60)

                                                  ATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGA                                             >  SRR4302540.3470945/1‑94 (MQ=60)

                                                   TAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGAT                                            >  SRR4302540.6008165/1‑94 (MQ=60)

                                                   TAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGAT                                            <  SRR4302540.539598/94‑1 (MQ=60)

                                                   TAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGAT                                            <  SRR4302540.2704182/94‑1 (MQ=60)

                                                   TAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGAT                                            <  SRR4302540.2481563/94‑1 (MQ=60)

                                                   TAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGAT                                            <  SRR4302540.4699523/94‑1 (MQ=60)

                                                     AGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGC                                          <  SRR4302540.7840780/94‑1 (MQ=60)

                                                     AGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGC                                          <  SRR4302540.6160590/94‑1 (MQ=60)

                                                     AGGAATGAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGC                                          <  SRR4302540.4047135/94‑1 (MQ=60)

                                                      GGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCA                                         <  SRR4302540.4175240/94‑1 (MQ=60)

                                                      GGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCA                                         >  SRR4302540.4748983/1‑94 (MQ=60)

                                                      AGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCA                                         <  SRR4302540.7940556/94‑1 (MQ=60)

                                                        AATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGT                                       <  SRR4302540.5843041/94‑1 (MQ=60)

                                                        AATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGT                                       <  SRR4302540.6909260/94‑1 (MQ=60)

                                                        AATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGT                                       <  SRR4302540.7779740/94‑1 (MQ=60)

                                                        AATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGT                                       <  SRR4302540.8247033/94‑1 (MQ=60)

                                                        AATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGT                                       <  SRR4302540.5231546/94‑1 (MQ=60)

                                                        AATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGT                                       <  SRR4302540.3024389/94‑1 (MQ=60)

                                                         ATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTG                                      <  SRR4302540.8660236/94‑1 (MQ=60)

                                                         ATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTG                                      >  SRR4302540.4236124/1‑94 (MQ=60)

                                                         ATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTG                                      <  SRR4302540.8826550/94‑1 (MQ=60)

                                                         ATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTG                                      >  SRR4302540.8925135/1‑94 (MQ=60)

                                                         ATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTG                                      >  SRR4302540.8971173/1‑94 (MQ=60)

                                                         ATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTG                                      >  SRR4302540.8610538/1‑94 (MQ=60)

                                                          TTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGG                                     <  SRR4302540.5351099/94‑1 (MQ=60)

                                                          TTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGG                                     >  SRR4302540.4727146/1‑94 (MQ=60)

                                                          TTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGG                                     >  SRR4302540.8535046/1‑94 (MQ=60)

                                                          TTAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGG                                     <  SRR4302540.581226/94‑1 (MQ=60)

                                                           TAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGG                                    >  SRR4302540.4339627/1‑94 (MQ=60)

                                                           TAAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGG                                    <  SRR4302540.8347866/94‑1 (MQ=60)

                                                            AAAGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGC                                   >  SRR4302540.6501365/1‑94 (MQ=60)

                                                              AGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGCGCTGTATACCATGGTGCTGTTATTACGCATCTGGTTGCAGTGGGCTC                                 >  SRR4302540.7847785/1‑94 (MQ=60)

                                                              AGGAACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTC                                 >  SRR4302540.3346402/1‑94 (MQ=60)

                                                                 AACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATT                              <  SRR4302540.4828806/94‑1 (MQ=60)

                                                                 AACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATT                              <  SRR4302540.9158521/94‑1 (MQ=60)

                                                                 AACGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGGGGGCTCATT                              >  SRR4302540.4683537/1‑94 (MQ=60)

                                                                   CGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGT                            <  SRR4302540.3788600/94‑1 (MQ=60)

                                                                   CGCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGT                            <  SRR4302540.1408743/94‑1 (MQ=60)

                                                                    GCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTG                           >  SRR4302540.7291066/1‑94 (MQ=60)

                                                                    GCCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTG                           >  SRR4302540.5308943/1‑94 (MQ=60)

                                                                     CCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGT                          >  SRR4302540.3215896/1‑94 (MQ=60)

                                                                     CCATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGA                          >  SRR4302540.8682069/1‑94 (MQ=60)

                                                                      CATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGAT                         <  SRR4302540.4689450/94‑1 (MQ=60)

                                                                      CATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGAT                         >  SRR4302540.9724996/1‑94 (MQ=60)

                                                                      CATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGAT                         >  SRR4302540.5098689/1‑94 (MQ=60)

                                                                      CATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGAT                         <  SRR4302540.4689451/94‑1 (MQ=60)

                                                                      CATGAATACGTTGACTTTCCTGCCTACAACGGTCATTCAACTGTAGACCATGGGCCTGTTATTACTCATCTGtgtacggtgtgctcattgtgct                         >  SRR4302540.6695557/1‑72 (MQ=24)

                                                                       ATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATT                        >  SRR4302540.9704722/1‑94 (MQ=60)

                                                                       ATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATT                        >  SRR4302540.9887212/1‑94 (MQ=60)

                                                                       ATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATT                        >  SRR4302540.6372582/1‑94 (MQ=60)

                                                                       ATGAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATT                        <  SRR4302540.6911019/94‑1 (MQ=60)

                                                                         GAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTT                      >  SRR4302540.10152314/1‑94 (MQ=60)

                                                                         GAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTT                      >  SRR4302540.9266387/1‑94 (MQ=60)

                                                                         GAATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTT                      <  SRR4302540.6572113/94‑1 (MQ=60)

                                                                          AATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTT                     <  SRR4302540.7348937/94‑1 (MQ=60)

                                                                           ATACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTA                    <  SRR4302540.2144598/94‑1 (MQ=60)

                                                                            TACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTAC                   <  SRR4302540.4176223/94‑1 (MQ=60)

                                                                             ACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACA                  <  SRR4302540.1497467/94‑1 (MQ=60)

                                                                             ACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACA                  <  SRR4302540.5501033/94‑1 (MQ=60)

                                                                             ACGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACA                  >  SRR4302540.3599155/1‑94 (MQ=60)

                                                                              CGTTGGCTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAA                 <  SRR4302540.6969930/94‑1 (MQ=60)

                                                                              CGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAA                 >  SRR4302540.2250622/1‑94 (MQ=60)

                                                                              CGTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAA                 <  SRR4302540.2326077/94‑1 (MQ=60)

                                                                               GTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAAC                <  SRR4302540.1728508/94‑1 (MQ=60)

                                                                               GTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAAC                >  SRR4302540.23230/1‑94 (MQ=60)

                                                                               GTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAAC                >  SRR4302540.1154223/1‑94 (MQ=60)

                                                                               GTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAAC                >  SRR4302540.3896963/1‑94 (MQ=60)

                                                                               GTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAAC                >  SRR4302540.4050244/1‑94 (MQ=60)

                                                                               GTTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAAC                >  SRR4302540.7824227/1‑94 (MQ=60)

                                                                               GCTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATCCCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAAC                <  SRR4302540.4294908/94‑1 (MQ=60)

                                                                                TTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACC               <  SRR4302540.4320589/94‑1 (MQ=60)

                                                                                TTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACC               <  SRR4302540.2568919/94‑1 (MQ=60)

                                                                                TTGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACC               <  SRR4302540.9224221/94‑1 (MQ=60)

                                                                                 TGACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACCC              >  SRR4302540.6467509/1‑94 (MQ=60)

                                                                                  GACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACCCC             <  SRR4302540.7236299/94‑1 (MQ=60)

                                                                                  GACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACCCC             >  SRR4302540.9234030/1‑94 (MQ=60)

                                                                                  GACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACCCC             <  SRR4302540.2967320/94‑1 (MQ=60)

                                                                                  GACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACCCC             >  SRR4302540.2627331/1‑94 (MQ=60)

                                                                                   ACTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGCGGGCTCATTGTGATTTTTACAACCCCT            >  SRR4302540.5530760/1‑94 (MQ=60)

                                                                                    CTTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACCCCTT           <  SRR4302540.8038207/94‑1 (MQ=60)

                                                                                     TTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACCCCTTC          >  SRR4302540.5746223/1‑94 (MQ=60)

                                                                                     TTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACCCCTTC          <  SRR4302540.2318983/94‑1 (MQ=60)

                                                                                     TTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACCCCTTC          <  SRR4302540.8452485/94‑1 (MQ=60)

                                                                                     TTTCCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACCCCTTC          >  SRR4302540.8412537/1‑94 (MQ=60)

                                                                                        CCTGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACCCCTTCTCA       >  SRR4302540.10097553/1‑94 (MQ=60)

                                                                                          TGCCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACCCCTTCTCACA     >  SRR4302540.6706260/1‑94 (MQ=60)

                                                                                            CCTTCAACGGTCATTGAGCTGTATCCCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACCCCTTCTCACAGT   <  SRR4302540.3449477/94‑1 (MQ=60)

                                                                                            CCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACCCCTTCTCACAGT   <  SRR4302540.3136682/94‑1 (MQ=60)

                                                                                            CCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACCCCTTCTCACAGT   >  SRR4302540.3860622/1‑94 (MQ=60)

                                                                                            CCTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACCCCTTCTCACAGT   >  SRR4302540.8871499/1‑94 (MQ=60)

                                                                                             CTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACCCCTTCTCACAGTT  >  SRR4302540.4658100/1‑94 (MQ=60)

                                                                                             CTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACCCCTTCTCACAGTT  <  SRR4302540.7723705/94‑1 (MQ=60)

ATGGTTCGTATCGGCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAAGGAATTAAAGGAACGCCATGAATACGTTGACTTTCCTGCTTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACCCCTTCTCACAGTT  >  NC_000913/3093768‑3093954

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`