Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,100,603	A→G	F90L (TTC→CTC)	yggH ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,100,603	0	A	G	100.0%	994.2 / NA	310	F90L (TTC→CTC)	yggH	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (147/163); total (147/163)

Only 100 of 331 total aligned reads displayed.

GACACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAAGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGCCAA  >  NC_000913/3100513‑3100692

 acacATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTc                                                                                        <  1:5100700/93‑1 (MQ=255)

   acaTCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCt                                                                                      >  2:8214955/1‑93 (MQ=255)

     aTCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGc                                                                                    >  2:2757287/1‑93 (MQ=255)

      tCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCt                                                                                   >  2:1865997/1‑93 (MQ=255)

        aCGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCa                                                                                 <  1:9316426/93‑1 (MQ=255)

        aCGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCa                                                                                 <  1:6802981/93‑1 (MQ=255)

        aCGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCa                                                                                 <  1:6619273/93‑1 (MQ=255)

        aCGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCa                                                                                 <  1:2016589/93‑1 (MQ=255)

        aCGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCa                                                                                 <  2:5946578/93‑1 (MQ=255)

        aCGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCa                                                                                 <  2:6415176/93‑1 (MQ=255)

            gcAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGc                                                                             >  2:1975333/1‑93 (MQ=255)

            gcAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGc                                                                             <  2:5087057/93‑1 (MQ=255)

               ggTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGAt                                                                          <  2:1705541/93‑1 (MQ=255)

               ggTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGAt                                                                          >  1:5507052/1‑93 (MQ=255)

               ggTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGAt                                                                          <  2:9695173/93‑1 (MQ=255)

                gTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATc                                                                         <  1:701773/93‑1 (MQ=255)

                gTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATc                                                                         >  1:5221296/1‑93 (MQ=255)

                 ttGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCt                                                                        >  1:4409720/1‑93 (MQ=255)

                 ttGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCt                                                                        >  2:3069616/1‑93 (MQ=255)

                 gtGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCt                                                                        <  1:3383531/92‑1 (MQ=255)

                   gCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCttt                                                                      >  1:1707188/1‑93 (MQ=255)

                   gCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCttt                                                                      >  2:7836455/1‑93 (MQ=255)

                   gCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCttt                                                                      <  1:4316236/93‑1 (MQ=255)

                   gCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCttt                                                                      >  2:5597235/1‑93 (MQ=255)

                   gCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATAtta                                                                      >  1:9533356/1‑92 (MQ=255)

                    cTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTa                                                                     >  1:2226002/1‑93 (MQ=255)

                     ctAAACCTTCTCCATGCGCAGAAGCCAGGCACGCGCCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAg                                                                    <  1:7471927/92‑1 (MQ=255)

                      tAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGc                                                                   >  1:538608/1‑93 (MQ=255)

                       aaaCCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGcc                                                                  <  1:5792493/93‑1 (MQ=255)

                        aaCCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCa                                                                 <  2:6162832/93‑1 (MQ=255)

                        aaCCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCa                                                                 >  1:8951896/1‑93 (MQ=255)

                        aaCCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCa                                                                 <  2:6854355/93‑1 (MQ=255)

                            ttcttcATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGGGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGc                                                             <  2:6978688/93‑1 (MQ=255)

                              cttcATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGcca                                                           <  2:2159326/93‑1 (MQ=255)

                               ttcATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGccac                                                          <  2:2654949/93‑1 (MQ=255)

                                 cATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGccacca                                                        >  2:1212102/1‑93 (MQ=255)

                                 cATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGccacca                                                        <  2:1299911/93‑1 (MQ=255)

                                  aTGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAg                                                       >  1:6218704/1‑93 (MQ=255)

                                  aTGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAg                                                       <  2:9472268/93‑1 (MQ=255)

                                   tGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGc                                                      >  1:1908070/1‑93 (MQ=255)

                                    gcgcAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCg                                                     <  1:8251901/93‑1 (MQ=255)

                                        cgAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGAGCTTTAGCCAGTGCCGCCAGCGACGc                                                 <  2:8074409/92‑1 (MQ=255)

                                         gAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGcc                                                >  2:5494577/1‑93 (MQ=255)

                                         gAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGcc                                                >  2:2587749/1‑93 (MQ=255)

                                         gAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGcc                                                >  2:6597758/1‑93 (MQ=255)

                                          aaGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGccc                                               >  2:4550134/1‑93 (MQ=255)

                                            gCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAACGACGccccc                                             >  1:1110118/1‑93 (MQ=255)

                                             ccAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCa                                            <  2:3232174/93‑1 (MQ=255)

                                             ccAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCa                                            <  1:4081579/93‑1 (MQ=255)

                                              cAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCAt                                           >  2:5136157/1‑93 (MQ=255)

                                               cggCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATg                                          <  1:547532/92‑1 (MQ=255)

                                               aGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCAtc                                          >  1:1788963/1‑92 (MQ=255)

                                                ggCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGc                                         >  1:3494635/1‑93 (MQ=255)

                                                   acgcacCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCaa                                      >  1:7345039/1‑93 (MQ=255)

                                                   acgcacCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCaa                                      >  1:4489244/1‑93 (MQ=255)

                                                    cgcacCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCaaa                                     >  2:5355938/1‑93 (MQ=255)

                                                      cacCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAAc                                   <  1:4540457/93‑1 (MQ=255)

                                                        ccAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCa                                 >  1:9644959/1‑93 (MQ=255)

                                                        ccAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCa                                 >  1:3733584/1‑93 (MQ=255)

                                                         cAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCaa                                <  2:9184483/93‑1 (MQ=255)

                                                          aaCGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCCCCAGCGACGCCCCCATGCCAAAACCAAt                               <  2:8339363/93‑1 (MQ=255)

                                                          aaCGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAAt                               <  2:2445240/93‑1 (MQ=255)

                                                            cGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAAtct                             <  2:5763088/93‑1 (MQ=255)

                                                             gCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAAtctc                            <  1:115221/93‑1 (MQ=255)

                                                             gCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAAtctc                            >  2:3594130/1‑93 (MQ=255)

                                                              cccGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCa                           <  2:9947337/93‑1 (MQ=255)

                                                              cccGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCa                           <  1:2759138/93‑1 (MQ=255)

                                                               ccGGTTAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCaa                          <  1:9412357/93‑1 (MQ=255)

                                                               ccGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCaa                          <  2:8939908/93‑1 (MQ=255)

                                                               ccGATGAATGCACTTCAATGCAGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCaa                          <  2:4913362/93‑1 (MQ=255)

                                                                cGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAg                         <  1:4913759/93‑1 (MQ=255)

                                                                cGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAg                         >  2:7597788/1‑93 (MQ=255)

                                                                cGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAg                         <  1:3946039/93‑1 (MQ=255)

                                                                cGGTGAATGCACCTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAg                         <  1:2457436/93‑1 (MQ=255)

                                                                 ggTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGc                        <  2:7050998/93‑1 (MQ=255)

                                                                  gTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCg                       >  1:8819893/1‑93 (MQ=255)

                                                                     aaTGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCa                    >  2:7363871/1‑93 (MQ=255)

                                                                      aTGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGCTCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCAc                   <  1:1095833/93‑1 (MQ=255)

                                                                      aTGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCAc                   <  2:848653/93‑1 (MQ=255)

                                                                      aTGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCAc                   >  2:1323499/1‑93 (MQ=255)

                                                                      aTGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCAc                   >  1:3147493/1‑93 (MQ=255)

                                                                       tGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCAcc                  <  2:4017792/93‑1 (MQ=255)

                                                                        gCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCg                 <  1:771634/93‑1 (MQ=255)

                                                                         cACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCgg                <  1:658345/93‑1 (MQ=255)

                                                                         cACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCgg                <  1:2563869/93‑1 (MQ=255)

                                                                          aCTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGgc               >  2:8607879/1‑93 (MQ=255)

                                                                          aCTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGgc               <  1:7564427/93‑1 (MQ=255)

                                                                            ttCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGgcgc             >  2:7304527/1‑93 (MQ=255)

                                                                             tCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCt            >  1:87060/1‑93 (MQ=255)

                                                                             tCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCt            >  1:5944597/1‑93 (MQ=255)

                                                                              cAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCtt           >  2:2825902/1‑93 (MQ=255)

                                                                              cAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCtt           >  1:1555824/1‑93 (MQ=255)

                                                                               aaTGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTc          >  1:9243595/1‑93 (MQ=255)

                                                                               aaTGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTc          <  2:2385582/93‑1 (MQ=255)

                                                                                aTGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCa         <  2:4234908/93‑1 (MQ=255)

                                                                                aTGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCa         <  1:5576760/93‑1 (MQ=255)

                                                                                aTGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCC‑AAACCAATCTCAAGCGTCACCGGCGCTTCAc        <  1:9953020/93‑1 (MQ=255)

                                                                                 tGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCAc        <  2:7170096/93‑1 (MQ=255)

                                                                                    cGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGc     >  1:2863766/1‑93 (MQ=255)

                                                                                       ggAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGCCaa  >  1:6417627/1‑93 (MQ=255)

GACACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAAGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGCCAA  >  NC_000913/3100513‑3100692

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CGTGACACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAAGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGCCAAAAAG  >  NC_000913/3100510‑3100696

CGTGACACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAG                                                                                               >  SRR4302540.2679762/1‑94 (MQ=60)

CGTGACACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAG                                                                                               <  SRR4302540.2457148/94‑1 (MQ=60)

 GTGACACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGG                                                                                              >  SRR4302540.359847/1‑94 (MQ=60)

 GTGACACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGG                                                                                              <  SRR4302540.9194635/94‑1 (MQ=60)

   GACACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTC                                                                                            >  SRR4302540.3792279/1‑94 (MQ=60)

   GACACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTC                                                                                            >  SRR4302540.369793/1‑94 (MQ=60)

    ACACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCC                                                                                           <  SRR4302540.987315/94‑1 (MQ=60)

    ACACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCC                                                                                           <  SRR4302540.5155900/94‑1 (MQ=60)

     CACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCT                                                                                          <  SRR4302540.4348555/94‑1 (MQ=60)

     CACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCT                                                                                          >  SRR4302540.7646955/1‑94 (MQ=60)

     CACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCG                                                                                          >  SRR4302540.9550618/1‑94 (MQ=60)

     CAAATCACACGCAGCTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCCCCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCT                                                                                          <  SRR4302540.4348554/94‑1 (MQ=60)

      ACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTG                                                                                         >  SRR4302540.6673542/1‑94 (MQ=60)

      ACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTG                                                                                         >  SRR4302540.43974/1‑94 (MQ=60)

        ATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCT                                                                                       >  SRR4302540.2959322/1‑94 (MQ=60)

        ATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCT                                                                                       <  SRR4302540.1908721/94‑1 (MQ=60)

         TCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTA                                                                                      >  SRR4302540.5378962/1‑94 (MQ=60)

           ACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAG                                                                                    <  SRR4302540.6692569/94‑1 (MQ=60)

           ACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAG                                                                                    <  SRR4302540.6878251/94‑1 (MQ=60)

           ACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAG                                                                                    <  SRR4302540.2893261/94‑1 (MQ=60)

           ACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAG                                                                                    <  SRR4302540.2038388/94‑1 (MQ=60)

           ACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAG                                                                                    <  SRR4302540.3380282/94‑1 (MQ=60)

           ACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAG                                                                                    <  SRR4302540.8278531/94‑1 (MQ=60)

           ACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAG                                                                                    <  SRR4302540.9427606/94‑1 (MQ=60)

           ACGCGAAGGTTACTTACACCTTCTTCACGCGCAGAACCCAGGCACGCACCAGCGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAG                                                                                    <  SRR4302540.1182697/94‑1 (MQ=60)

            CGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGG                                                                                   <  SRR4302540.5558268/94‑1 (MQ=60)

            CGCGCAGGTTGCGTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGG                                                                                   <  SRR4302540.5558267/94‑1 (MQ=60)

             GCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGG                                                                                  >  SRR4302540.1738128/1‑94 (MQ=60)

                CAGGTTGCTTAAGCCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGA                                                                               <  SRR4302540.3448006/94‑1 (MQ=60)

                CAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGA                                                                               >  SRR4302540.9454672/1‑94 (MQ=60)

                 AGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGAT                                                                              >  SRR4302540.5567702/1‑94 (MQ=60)

                 AGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGAT                                                                              <  SRR4302540.7255214/94‑1 (MQ=60)

                 AGCTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGAT                                                                              <  SRR4302540.2157080/94‑1 (MQ=60)

                  GGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATC                                                                             >  SRR4302540.5726648/1‑94 (MQ=60)

                  GGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATC                                                                             <  SRR4302540.5884670/94‑1 (MQ=60)

                  GGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATC                                                                             >  SRR4302540.5278218/1‑94 (MQ=60)

                  GGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATC                                                                             >  SRR4302540.4469875/1‑94 (MQ=60)

                  GGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATC                                                                             <  SRR4302540.8312833/94‑1 (MQ=60)

                   GTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCT                                                                            >  SRR4302540.140472/1‑94 (MQ=60)

                   GTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCT                                                                            >  SRR4302540.4457522/1‑94 (MQ=60)

                   GTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCT                                                                            <  SRR4302540.709306/94‑1 (MQ=60)

                   GTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCT                                                                            <  SRR4302540.7084976/94‑1 (MQ=60)

                    TTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTT                                                                           >  SRR4302540.6418436/1‑94 (MQ=60)

                    TTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTT                                                                           <  SRR4302540.538348/94‑1 (MQ=60)

                    TTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTT                                                                           >  SRR4302540.3386171/1‑94 (MQ=60)

                    GTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTT                                                                           <  SRR4302540.3420463/94‑1 (MQ=60)

                     TGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATatta                                                                          >  SRR4302540.9646217/1‑90 (MQ=60)

                     TGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTT                                                                          >  SRR4302540.1695426/1‑94 (MQ=60)

                     TGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTT                                                                          >  SRR4302540.1725639/1‑94 (MQ=60)

                      GCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGTGCGATCTTTA                                                                         >  SRR4302540.6182682/1‑94 (MQ=60)

                      GCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTA                                                                         >  SRR4302540.2249989/1‑94 (MQ=60)

                      GCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTA                                                                         <  SRR4302540.4363230/94‑1 (MQ=60)

                        TTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGC                                                                       >  SRR4302540.8913138/1‑94 (MQ=60)

                        TTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGC                                                                       >  SRR4302540.544434/1‑94 (MQ=60)

                        TTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGC                                                                       >  SRR4302540.544435/1‑94 (MQ=60)

                        TTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGC                                                                       <  SRR4302540.114166/94‑1 (MQ=60)

                        CTAAACCTTCTCCATGCGCAGAAGCCAGGCACGCGCCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGC                                                                       <  SRR4302540.7555299/94‑1 (MQ=60)

                         TAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATATTTAGCC                                                                      >  SRR4302540.3852447/1‑94 (MQ=60)

                          AAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCA                                                                     <  SRR4302540.5856494/94‑1 (MQ=60)

                          AAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCA                                                                     >  SRR4302540.6020451/1‑94 (MQ=60)

                          AAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCA                                                                     >  SRR4302540.9057452/1‑94 (MQ=60)

                           AACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCAT                                                                    <  SRR4302540.1126445/94‑1 (MQ=60)

                           AACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCAT                                                                    <  SRR4302540.2315117/94‑1 (MQ=60)

                           AACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCAT                                                                    <  SRR4302540.4435758/94‑1 (MQ=60)

                            ACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATT                                                                   <  SRR4302540.5513267/94‑1 (MQ=60)

                            ACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATT                                                                   <  SRR4302540.9744786/94‑1 (MQ=60)

                             CCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTG                                                                  >  SRR4302540.7515342/1‑94 (MQ=60)

                               TTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCC                                                                >  SRR4302540.7448057/1‑94 (MQ=60)

                                   TCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCA                                                            <  SRR4302540.9191857/94‑1 (MQ=60)

                                    CATGCGCAGAAGCCAGGTACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAG                                                           >  SRR4302540.6758695/1‑94 (MQ=60)

                                    CATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAG                                                           >  SRR4302540.6287889/1‑94 (MQ=60)

                                     ATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGC                                                          <  SRR4302540.4072785/94‑1 (MQ=60)

                                     ATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGC                                                          >  SRR4302540.1928919/1‑94 (MQ=60)

                                     ATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGC                                                          >  SRR4302540.662234/1‑94 (MQ=60)

                                      TGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCG                                                         <  SRR4302540.3120645/94‑1 (MQ=60)

                                       GCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGA                                                        <  SRR4302540.8347817/94‑1 (MQ=60)

                                        CGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGAC                                                       >  SRR4302540.2880797/1‑94 (MQ=60)

                                         GCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACG                                                      <  SRR4302540.5247775/94‑1 (MQ=60)

                                           AGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCC                                                    >  SRR4302540.3040438/1‑94 (MQ=60)

                                           AGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCC                                                    >  SRR4302540.5605021/1‑94 (MQ=60)

                                           AGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCC                                                    >  SRR4302540.3953080/1‑94 (MQ=60)

                                            GAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGTGCGATCTTTAGCCATTGCCACCAGCGACGCCC                                                   >  SRR4302540.4794734/1‑94 (MQ=60)

                                             AAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCC                                                  <  SRR4302540.9804869/94‑1 (MQ=60)

                                             AAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCC                                                  >  SRR4302540.4418565/1‑94 (MQ=60)

                                              AGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCC                                                 >  SRR4302540.1121594/1‑94 (MQ=60)

                                              AGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCC                                                 >  SRR4302540.1121595/1‑94 (MQ=60)

                                              AGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCC                                                 >  SRR4302540.1649177/1‑94 (MQ=60)

                                              AGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAACGACGCCCCC                                                 >  SRR4302540.1121597/1‑94 (MQ=60)

                                               GCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCA                                                <  SRR4302540.6397870/94‑1 (MQ=60)

                                               GCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCA                                                <  SRR4302540.6397871/94‑1 (MQ=60)

                                                CCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCAT                                               <  SRR4302540.4535341/94‑1 (MQ=60)

                                                CCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCAT                                               <  SRR4302540.4125589/94‑1 (MQ=60)

                                                 CATGCACGCACCAACGCCCGGTGAATGCACTTCTATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGTCTCCAGCGACGCCCCCATG                                              >  SRR4302540.9091636/1‑94 (MQ=60)

                                                 CATGCACGCACCAACGCCCGGTGAATGCACATCTATGCCGAGGAGTTCCTGCTCATGGCGATCTTAAGCCAATGTCTCTAGCGACGCCCCCATG                                              >  SRR4302540.9091635/1‑94 (MQ=36)

                                                 CAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATG                                              >  SRR4302540.4004525/1‑94 (MQ=60)

                                                 CAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATG                                              >  SRR4302540.159578/1‑94 (MQ=60)

                                                 CAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATC                                              >  SRR4302540.1808409/1‑94 (MQ=60)

                                                 CAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTCCTCAGGCCGATCTTAAGCCATTGCCACCAcgcacgccccaatc                                              >  SRR4302540.7746875/1‑80 (MQ=60)

                                                  CGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGC                                             <  SRR4302540.553496/94‑1 (MQ=60)

                                                  AGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGC                                             >  SRR4302540.7106016/1‑94 (MQ=60)

                                                  AGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGC                                             >  SRR4302540.3532702/1‑94 (MQ=60)

                                                  AGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGC                                             >  SRR4302540.2505537/1‑94 (MQ=60)

                                                    GCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCA                                           <  SRR4302540.9393766/94‑1 (MQ=60)

                                                     CACGCGCCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAA                                          <  SRR4302540.5111719/94‑1 (MQ=60)

                                                     CACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAA                                          <  SRR4302540.2036067/94‑1 (MQ=60)

                                                     CACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAA                                          >  SRR4302540.7426990/1‑94 (MQ=60)

                                                     CACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAA                                          >  SRR4302540.9755148/1‑94 (MQ=60)

                                                     CACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAA                                          >  SRR4302540.4537927/1‑94 (MQ=60)

                                                     CACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAA                                          >  SRR4302540.5255545/1‑94 (MQ=60)

                                                      ACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAA                                         <  SRR4302540.9613971/94‑1 (MQ=60)

                                                         CACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACC                                      <  SRR4302540.9118005/94‑1 (MQ=60)

                                                         CACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACC                                      <  SRR4302540.4589597/94‑1 (MQ=60)

                                                          ACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCA                                     >  SRR4302540.3774318/1‑94 (MQ=60)

                                                          ACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCA                                     >  SRR4302540.7499040/1‑94 (MQ=60)

                                                          ACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCA                                     >  SRR4302540.9758554/1‑94 (MQ=60)

                                                           CCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAA                                    >  SRR4302540.8931008/1‑94 (MQ=60)

                                                           CCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAA                                    <  SRR4302540.1758897/94‑1 (MQ=60)

                                                            caaccgccgggtgattgccttgcaagccaagggAGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAAT                                   <  SRR4302540.5711688/61‑1 (MQ=60)

                                                            CAACGCCCGGTGAATGCACTCCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAAT                                   >  SRR4302540.853866/1‑94 (MQ=60)

                                                              ACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCT                                 >  SRR4302540.2513418/1‑94 (MQ=60)

                                                               CGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTC                                >  SRR4302540.9469753/1‑94 (MQ=60)

                                                                GCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCA                               <  SRR4302540.2412222/94‑1 (MQ=60)

                                                                GCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCA                               <  SRR4302540.116450/94‑1 (MQ=60)

                                                                 CCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAA                              <  SRR4302540.1994513/94‑1 (MQ=60)

                                                                 CCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAA                              <  SRR4302540.2788946/94‑1 (MQ=60)

                                                                  CCGGTTAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAG                             <  SRR4302540.9524268/94‑1 (MQ=60)

                                                                  CCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAG                             <  SRR4302540.468517/94‑1 (MQ=60)

                                                                  CCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAG                             >  SRR4302540.6775363/1‑94 (MQ=60)

                                                                   CGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGC                            <  SRR4302540.2028249/94‑1 (MQ=60)

                                                                   CGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGC                            <  SRR4302540.4966670/94‑1 (MQ=60)

                                                                   CGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGC                            <  SRR4302540.4672059/94‑1 (MQ=60)

                                                                   CGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGC                            <  SRR4302540.5721012/94‑1 (MQ=60)

                                                                   CGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGA                            <  SRR4302540.3988644/94‑1 (MQ=60)

                                                                   CGGTGAATGCACCTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGC                            <  SRR4302540.2483883/94‑1 (MQ=60)

                                                                    GGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCG                           >  SRR4302540.8872198/1‑94 (MQ=60)

                                                                    GGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCG                           >  SRR4302540.8921873/1‑94 (MQ=60)

                                                                    GGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCG                           <  SRR4302540.5595173/94‑1 (MQ=60)

                                                                      TGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTC                         <  SRR4302540.5421803/94‑1 (MQ=60)

                                                                       GAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCC                        >  SRR4302540.5929391/1‑94 (MQ=60)

                                                                       GAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCA                        >  SRR4302540.7073125/1‑94 (MQ=60)

                                                                       GAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCA                        >  SRR4302540.75569/1‑94 (MQ=60)

                                                                       GAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCA                        <  SRR4302540.667655/94‑1 (MQ=60)

                                                                       GAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCA                        >  SRR4302540.6814211/1‑94 (MQ=60)

                                                                        AATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCAC                       >  SRR4302540.3181781/1‑94 (MQ=60)

                                                                         ATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGCTCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACC                      <  SRR4302540.1107104/94‑1 (MQ=60)

                                                                           GCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGG                    <  SRR4302540.1894181/94‑1 (MQ=60)

                                                                           GCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGG                    <  SRR4302540.779843/94‑1 (MQ=60)

                                                                           GCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGG                    <  SRR4302540.5124496/94‑1 (MQ=60)

                                                                           GCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCGCAAGCGTCACCGG                    <  SRR4302540.8604214/94‑1 (MQ=60)

                                                                            CACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGC                   <  SRR4302540.2591512/94‑1 (MQ=60)

                                                                            CACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGC                   <  SRR4302540.665371/94‑1 (MQ=60)

                                                                            CACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGC                   >  SRR4302540.9383875/1‑94 (MQ=60)

                                                                             ACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCG                  <  SRR4302540.7649268/94‑1 (MQ=60)

                                                                              CTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGC                 >  SRR4302540.256503/1‑94 (MQ=60)

                                                                              CTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGC                 >  SRR4302540.8291070/1‑94 (MQ=60)

                                                                               TTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCT                >  SRR4302540.6010309/1‑94 (MQ=60)

                                                                               TTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCT                >  SRR4302540.87982/1‑94 (MQ=60)

                                                                                TCAATGCCGAGGAGGTCCTGCTCATGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTT               >  SRR4302540.9626350/1‑94 (MQ=60)

                                                                                TCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTT               >  SRR4302540.1572931/1‑94 (MQ=60)

                                                                                TCAATGCCGAGGAGGTCCTGCTCAGGGCGAGCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTC               >  SRR4302540.9034595/1‑94 (MQ=60)

                                                                                 CAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCTTTGCCACCAGCGACGCCCCCATGCCAAAACAAATCTCAAGCGTCACCGGCGCTCC              >  SRR4302540.4556225/1‑94 (MQ=60)

                                                                                 CAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTC              >  SRR4302540.9354294/1‑94 (MQ=60)

                                                                                 CAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTC              >  SRR4302540.2738256/1‑94 (MQ=60)

                                                                                   ATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCAC            <  SRR4302540.5638157/94‑1 (MQ=60)

                                                                                   ATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCC‑AAACCAATCTCAAGCGTCACCGGCGCTTCACG           <  SRR4302540.10069205/94‑1 (MQ=60)

                                                                                     GCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGG          <  SRR4302540.4542597/94‑1 (MQ=60)

                                                                                     GCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGG          <  SRR4302540.2739478/94‑1 (MQ=60)

                                                                                      CCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGC         >  SRR4302540.2894826/1‑94 (MQ=60)

                                                                                      CCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGC         <  SRR4302540.3552426/94‑1 (MQ=60)

                                                                                       CGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGCC        >  SRR4302540.4801061/1‑94 (MQ=60)

                                                                                        GAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGCCA       >  SRR4302540.4172227/1‑94 (MQ=60)

                                                                                        GAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGCCA       <  SRR4302540.3480285/94‑1 (MQ=60)

                                                                                         AGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGCCAA      >  SRR4302540.7782553/1‑94 (MQ=60)

                                                                                         AGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGCCAA      >  SRR4302540.2073005/1‑94 (MQ=60)

                                                                                         AGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGCCAA      >  SRR4302540.6613028/1‑94 (MQ=60)

                                                                                         AGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGCCAA      >  SRR4302540.6489056/1‑94 (MQ=60)

                                                                                          GGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGCCAAA     >  SRR4302540.10020737/1‑94 (MQ=60)

                                                                                          GGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGCCAAA     >  SRR4302540.8773342/1‑94 (MQ=60)

                                                                                           GAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGCCAAAA    >  SRR4302540.2710611/1‑94 (MQ=60)

                                                                                            AGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGCCAAAAA   <  SRR4302540.3354513/94‑1 (MQ=60)

                                                                                            AGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGCCAAAAA   >  SRR4302540.1684884/1‑94 (MQ=60)

                                                                                            AGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGCCAAAAA   >  SRR4302540.1684883/1‑94 (MQ=60)

                                                                                             GGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGCCAAAAAG  >  SRR4302540.7606887/1‑94 (MQ=60)

CGTGACACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAAGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGCCAAAAAG  >  NC_000913/3100510‑3100696

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`