Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,107,469 +C intergenic (‑296/‑101) b2965 ← / → yqgA ornithine decarboxylase isozyme/putative transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,107,4691.C98.8% 1338.5 / 5.8 421intergenic (‑296/‑101)b2965/yqgAornithine decarboxylase isozyme/putative transport protein
Reads supporting (aligned to +/- strand):  ref base . (0/5);  new base C (197/219);  total (197/224)
Fisher's exact test for biased strand distribution p-value = 6.36e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01

Only 100 of 462 total aligned reads displayed.

GAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTT‑GCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGC  >  NC_000913/3107377‑3107555
                                                                                             |                                                                                      
gAAACGGCGATAAGCGAGAGCATGTAAGGAGATGGCGTGCATCGGGCAACCTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCttt                                                                                         >  1:9515049/1‑93 (MQ=255)
gAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCttt                                                                                         >  2:6963538/1‑93 (MQ=255)
gAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCttt                                                                                         <  2:1192995/93‑1 (MQ=255)
 aaaCGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCtttc                                                                                        <  2:3918859/93‑2 (MQ=255)
  aaCGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCtttcg                                                                                       >  1:6700240/1‑91 (MQ=255)
   aCGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCtttcgc                                                                                      >  1:7302017/1‑90 (MQ=255)
    cGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCtttcgct                                                                                     >  1:9181813/1‑89 (MQ=255)
      gagATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCACACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTaa                                                                                   >  1:4803221/3‑93 (MQ=255)
      gCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTaa                                                                                   >  1:1588796/1‑93 (MQ=255)
      gCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTaa                                                                                   >  2:4520289/1‑93 (MQ=255)
        gATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAg                                                                                 <  1:3805680/93‑1 (MQ=255)
         aTAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGc                                                                                >  2:2527802/1‑93 (MQ=255)
          tAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCg                                                                               >  2:240496/1‑93 (MQ=255)
           aaGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGt                                                                              >  2:6429549/1‑93 (MQ=255)
           aaGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGt                                                                              >  2:3703680/1‑93 (MQ=255)
             gCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGc                                                                            >  2:4284518/1‑93 (MQ=255)
             gCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGc                                                                            >  1:4001693/1‑93 (MQ=255)
              cGAGAGAATGTAAGGAGATGGCGTGCATCGAGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCa                                                                           <  1:9631897/93‑1 (MQ=255)
               gagagaATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCaa                                                                          <  2:6337842/93‑1 (MQ=255)
                agagaATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGaaac                                                                         >  1:8563185/1‑92 (MQ=255)
                agagaATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAg                                                                         >  1:1126325/1‑93 (MQ=255)
                 gagaATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGc                                                                        <  1:5486368/93‑1 (MQ=255)
                  agaATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGcc                                                                       <  2:104390/93‑1 (MQ=255)
                   gaATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCa                                                                      >  2:6668660/1‑93 (MQ=255)
                   gaATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCa                                                                      >  2:4591159/1‑93 (MQ=255)
                    aaTGTAAGGAGATGGGGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAg                                                                     <  2:2279291/93‑1 (MQ=255)
                    aaTGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAg                                                                     >  2:3254235/1‑93 (MQ=255)
                    aaTGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAg                                                                     <  2:5851325/93‑1 (MQ=255)
                    aaTGGAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCGAAAGCGTGCAAGCCAg                                                                     <  1:6147395/93‑1 (MQ=255)
                      tGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGa                                                                   >  2:675262/1‑93 (MQ=255)
                      tGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGa                                                                   <  2:5281215/93‑1 (MQ=255)
                      tGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGa                                                                   >  1:1030309/1‑93 (MQ=255)
                      tGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGa                                                                   <  1:2002811/93‑1 (MQ=255)
                      agTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGa                                                                   <  2:3604993/92‑1 (MQ=255)
                        tAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACt                                                                 >  1:3330526/1‑93 (MQ=255)
                         aaGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACtt                                                                <  1:5918072/93‑1 (MQ=255)
                         aaGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACtt                                                                <  1:1906347/93‑1 (MQ=255)
                          aGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACttt                                                               >  1:698747/1‑93 (MQ=255)
                            gagaTGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGc                                                             >  2:6161718/1‑93 (MQ=255)
                              gaTGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGa                                                           >  1:5090149/1‑93 (MQ=255)
                                tGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGaac                                                         >  2:7180073/1‑93 (MQ=255)
                                 ggCGTGCATCGGGCAAACTCCGTACAGTGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGaaca                                                        >  2:7717095/1‑93 (MQ=255)
                                 ggCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAACATTCACGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGaaca                                                        <  2:8957866/93‑1 (MQ=255)
                                    gTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGaacaaac                                                     <  2:9297520/93‑1 (MQ=255)
                                     tGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGaacaaaca                                                    <  1:4221259/93‑1 (MQ=255)
                                     tGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGaacaaaca                                                    <  1:181551/93‑1 (MQ=255)
                                     tGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGaacaaaca                                                    >  2:9699737/1‑93 (MQ=255)
                                     tGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGaacaaaca                                                    >  2:4115878/1‑93 (MQ=255)
                                        aTCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGc                                                 >  1:10003925/1‑93 (MQ=255)
                                         tCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGcc                                                <  2:8608388/93‑1 (MQ=255)
                                         tCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGcc                                                >  1:1464285/1‑93 (MQ=255)
                                          cGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCa                                               >  2:30244/1‑93 (MQ=255)
                                          cGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCa                                               <  1:6339719/93‑1 (MQ=255)
                                           gggCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCAt                                              <  1:2829360/93‑1 (MQ=255)
                                           gggCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCAt                                              <  2:342581/93‑1 (MQ=255)
                                           gggCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCAt                                              <  1:3723286/93‑1 (MQ=255)
                                            ggCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATc                                             <  1:8832830/93‑1 (MQ=255)
                                             gCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCg                                            <  2:2050964/93‑1 (MQ=255)
                                             gCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCg                                            >  2:7840290/1‑93 (MQ=255)
                                             gCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCg                                            >  2:8470502/1‑93 (MQ=255)
                                              gaaaCTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGa                                           <  1:8401815/92‑1 (MQ=255)
                                              cAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGa                                           >  1:9376317/1‑93 (MQ=255)
                                              cAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGa                                           >  1:8264294/1‑93 (MQ=255)
                                              cAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGa                                           <  2:7577663/93‑1 (MQ=255)
                                                 aCTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACgg                                        >  1:7452450/1‑93 (MQ=255)
                                                    ccGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCAc                                     >  2:1375127/1‑93 (MQ=255)
                                                        aCAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCaaa                                 <  2:5717751/93‑1 (MQ=255)
                                                        aCAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCaaa                                 <  1:2372174/93‑1 (MQ=255)
                                                        aCAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCaaa                                 >  2:91388/1‑93 (MQ=255)
                                                        aCAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCaaa                                 <  1:5857234/93‑1 (MQ=255)
                                                        aCAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCaaa                                 <  2:3094568/93‑1 (MQ=255)
                                                         cAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAAc                                >  2:8047839/1‑93 (MQ=255)
                                                         cAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAAc                                <  2:2668990/93‑1 (MQ=255)
                                                         cAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAAc                                <  1:8982687/93‑1 (MQ=255)
                                                          agagagGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACg                               <  2:1776399/93‑1 (MQ=255)
                                                            agagGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGt                             <  1:2497656/93‑1 (MQ=255)
                                                             gaggagAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTc                            >  1:8012033/1‑93 (MQ=255)
                                                              aggagAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCa                           <  2:8268905/93‑1 (MQ=255)
                                                                gagaAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCata                         <  1:6599627/93‑1 (MQ=255)
                                                                 agaAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCataa                        >  2:1584884/1‑93 (MQ=255)
                                                                  gaAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCataat                       <  1:6529907/93‑1 (MQ=255)
                                                                  gaAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCataat                       <  1:2681013/93‑1 (MQ=255)
                                                                    aaaTTCGCTGAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCAtaataa                     <  1:3552948/93‑1 (MQ=255)
                                                                      aTTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGa                   <  1:5228302/93‑1 (MQ=255)
                                                                       ttCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGaa                  <  1:7618181/93‑1 (MQ=255)
                                                                        tCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGaaa                 <  2:9828917/93‑1 (MQ=255)
                                                                         cgcgCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGaaaa                <  2:5481291/93‑1 (MQ=255)
                                                                         cgcgCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGaaaa                <  1:5735489/93‑1 (MQ=255)
                                                                          gcgcAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAAt               <  1:3218917/93‑1 (MQ=255)
                                                                           cgcAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATc              <  2:2775779/93‑1 (MQ=255)
                                                                             cAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCaa            <  1:9846528/93‑1 (MQ=255)
                                                                               aTCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAAc          >  2:7266831/1‑93 (MQ=255)
                                                                                tCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAACTCAACCa         >  1:3376842/1‑93 (MQ=255)
                                                                                tCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACa         <  2:9481631/93‑1 (MQ=255)
                                                                                tCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACa         <  1:2167315/93‑1 (MQ=255)
                                                                                tCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACa         <  1:1234820/93‑1 (MQ=255)
                                                                                   tGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATa      <  2:5075554/93‑1 (MQ=255)
                                                                                   tGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATa      <  1:6855282/93‑1 (MQ=255)
                                                                                   tGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATa      <  2:8760710/93‑1 (MQ=255)
                                                                                     gCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACa    <  1:4537597/93‑1 (MQ=255)
                                                                                             |                                                                                      
GAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTT‑GCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGC  >  NC_000913/3107377‑3107555

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 255 total aligned reads displayed.
CGAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TT‑GCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCTAACAGG  >  NC_000913/3107376‑3107562
                                                                                              |                                                                                              
CGAAACGGCGATAAGCGAGAGCATGTAAGGAGATGGCGTGCATCGGGCAACCTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TT                                                                                                >  SRR4302540.9627747/1‑94 (MQ=60)
CGAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TT                                                                                                >  SRR4302540.2036560/1‑94 (MQ=60)
 GAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TT‑C                                                                                              <  SRR4302540.8622057/94‑1 (MQ=60)
  AAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTcg                                                                                              >  SRR4302540.6774203/1‑92 (MQ=60)
  AAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTcg                                                                                              >  SRR4302540.9715772/1‑92 (MQ=60)
  AAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTcg                                                                                              <  SRR4302540.5231834/94‑3 (MQ=60)
  AAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTcg                                                                                              >  SRR4302540.9050871/1‑92 (MQ=60)
   AACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTcgc                                                                                             >  SRR4302540.7383520/1‑91 (MQ=60)
    ACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCT                                                                                            >  SRR4302540.6707278/1‑94 (MQ=60)
    ACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCT                                                                                            <  SRR4302540.6898914/94‑1 (MQ=60)
    ACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCT                                                                                            >  SRR4302540.9291934/1‑94 (MQ=60)
     CGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTA                                                                                           >  SRR4302540.9313064/1‑94 (MQ=60)
      GGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCTGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAA                                                                                          <  SRR4302540.1073691/94‑1 (MQ=60)
      GGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAA                                                                                          >  SRR4302540.1606152/1‑94 (MQ=60)
      GGAGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCACACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAA                                                                                          >  SRR4302540.4854626/1‑94 (MQ=60)
       GCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAA                                                                                         <  SRR4302540.9447674/94‑1 (MQ=60)
        ggaaaagcgaaaaaatggAAGGAAATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAAAAAAATCGCGCAATCATGGCACCT‑TTCGCTAAAG                                                                                        <  SRR4302540.1114658/76‑1 (MQ=60)
        CGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAG                                                                                        >  SRR4302540.7721091/1‑94 (MQ=60)
         GATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGC                                                                                       >  SRR4302540.4781937/1‑94 (MQ=60)
         GATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGC                                                                                       >  SRR4302540.341086/1‑94 (MQ=60)
          ATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCG                                                                                      <  SRR4302540.4744236/94‑1 (MQ=60)
           TAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGT                                                                                     <  SRR4302540.608191/94‑1 (MQ=60)
            AAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTG                                                                                    >  SRR4302540.3407028/1‑94 (MQ=60)
             AGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGC                                                                                   >  SRR4302540.4044766/1‑94 (MQ=60)
             AGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGC                                                                                   <  SRR4302540.810403/94‑1 (MQ=60)
             AGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGC                                                                                   >  SRR4302540.6730906/1‑94 (MQ=60)
               CGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAA                                                                                 >  SRR4302540.3689467/1‑94 (MQ=60)
               CGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAA                                                                                 >  SRR4302540.1037910/1‑94 (MQ=60)
               CGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAA                                                                                 <  SRR4302540.377630/94‑1 (MQ=60)
               CGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAA                                                                                 >  SRR4302540.2480893/1‑94 (MQ=60)
               CGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAA                                                                                 <  SRR4302540.8419809/94‑1 (MQ=60)
               CGAGAGAATGTAAGGAGATGGCGTGCATCGAGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAA                                                                                 <  SRR4302540.9745392/94‑1 (MQ=60)
                GAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGaaac                                                                                >  SRR4302540.8662631/1‑90 (MQ=60)
                GAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAGG                                                                                <  SRR4302540.8970206/94‑1 (MQ=60)
                GAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAG                                                                                >  SRR4302540.4309047/1‑94 (MQ=60)
                GAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATGCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAG                                                                                <  SRR4302540.8970207/94‑1 (MQ=60)
                  GAGAGTGTAAGGAGAGGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCC                                                                              <  SRR4302540.5546762/94‑1 (MQ=60)
                  GAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCC                                                                              <  SRR4302540.5546761/94‑1 (MQ=60)
                  GAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCC                                                                              >  SRR4302540.7151613/1‑94 (MQ=60)
                   AGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCA                                                                             >  SRR4302540.4077668/1‑94 (MQ=60)
                   AGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCA                                                                             >  SRR4302540.1239085/1‑94 (MQ=60)
                   AGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCA                                                                             >  SRR4302540.5852502/1‑94 (MQ=60)
                    GAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAG                                                                            <  SRR4302540.10039544/94‑1 (MQ=60)
                     AATGGAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCGAAAGCGTGCAAGCCAGG                                                                           <  SRR4302540.6215860/94‑1 (MQ=60)
                      ATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGCGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGA                                                                          >  SRR4302540.1040771/1‑94 (MQ=60)
                      ATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGA                                                                          >  SRR4302540.1040769/1‑94 (MQ=60)
                      ATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGA                                                                          >  SRR4302540.4385516/1‑94 (MQ=60)
                      ATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGA                                                                          >  SRR4302540.616380/1‑94 (MQ=60)
                      ATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGA                                                                          >  SRR4302540.1985501/1‑94 (MQ=60)
                       TGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGAC                                                                         <  SRR4302540.5289737/94‑1 (MQ=60)
                       TGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGAC                                                                         >  SRR4302540.3172003/1‑94 (MQ=60)
                       TGGAAGGAGATGGCTTGCAGCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTGTC‑GCTAAAGCGTGCAAGCCAGGAC                                                                         <  SRR4302540.1896872/94‑1 (MQ=60)
                        GTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACT                                                                        <  SRR4302540.8219415/94‑1 (MQ=60)
                        GTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACT                                                                        >  SRR4302540.3367090/1‑94 (MQ=60)
                        GTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACT                                                                        <  SRR4302540.3476787/94‑1 (MQ=60)
                         TAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTT                                                                       <  SRR4302540.2280516/94‑1 (MQ=60)
                          AAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTT                                                                      <  SRR4302540.5983447/94‑1 (MQ=60)
                          AAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTT                                                                      >  SRR4302540.706243/1‑94 (MQ=60)
                          AAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTT                                                                      <  SRR4302540.6018/94‑1 (MQ=60)
                          AAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTT                                                                      <  SRR4302540.5981623/94‑1 (MQ=60)
                          AAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTT                                                                      <  SRR4302540.9862577/94‑1 (MQ=60)
                          AAGGAGATGGCGGGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTT                                                                      <  SRR4302540.4923746/94‑1 (MQ=60)
                           AGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTG                                                                     >  SRR4302540.3872208/1‑94 (MQ=60)
                           AGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTG                                                                     <  SRR4302540.9123934/94‑1 (MQ=60)
                             GAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCG                                                                   <  SRR4302540.1489304/94‑1 (MQ=60)
                             GAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCG                                                                   <  SRR4302540.1489302/94‑1 (MQ=60)
                              AGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGA                                                                  <  SRR4302540.838319/94‑1 (MQ=60)
                              AGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGA                                                                  >  SRR4302540.5145196/1‑94 (MQ=60)
                              AGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGA                                                                  >  SRR4302540.2764812/1‑94 (MQ=60)
                               GATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAA                                                                 >  SRR4302540.1877135/1‑94 (MQ=60)
                                ATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAAC                                                                <  SRR4302540.5931437/94‑1 (MQ=60)
                                  GGCGTGCATCGGGCAAACTCCGTACAGAGGGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAA                                                              <  SRR4302540.1113968/94‑1 (MQ=60)
                                  GGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAA                                                              <  SRR4302540.2400945/94‑1 (MQ=60)
                                   GCGTGCATCGGGCAACCTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAA                                                             <  SRR4302540.2336705/94‑1 (MQ=60)
                                    CGTGCATCGGGCAAACTCCGTGCAGAGAGGAGAAAATTCGCGGAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAAC                                                            <  SRR4302540.7636860/94‑1 (MQ=60)
                                    CGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAAC                                                            >  SRR4302540.355353/1‑94 (MQ=60)
                                     GTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACA                                                           >  SRR4302540.2103139/1‑94 (MQ=60)
                                     GTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACA                                                           >  SRR4302540.2694735/1‑94 (MQ=60)
                                     GTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACA                                                           >  SRR4302540.623340/1‑94 (MQ=60)
                                     GTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACA                                                           >  SRR4302540.7624134/1‑94 (MQ=60)
                                      TGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAA                                                          <  SRR4302540.332002/94‑1 (MQ=60)
                                      TGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAA                                                          >  SRR4302540.1848873/1‑94 (MQ=60)
                                      TGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAA                                                          <  SRR4302540.3854701/94‑1 (MQ=60)
                                      TGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAA                                                          <  SRR4302540.4267215/94‑1 (MQ=60)
                                       GCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAG                                                         <  SRR4302540.6631194/94‑1 (MQ=60)
                                       GCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAG                                                         <  SRR4302540.4231204/94‑1 (MQ=60)
                                       GCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAG                                                         <  SRR4302540.7467845/94‑1 (MQ=60)
                                       GCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAG                                                         >  SRR4302540.8588325/1‑94 (MQ=60)
                                        CATCGGGCAAACTCCGTACAGAGAGGATAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGC                                                        <  SRR4302540.3968834/94‑1 (MQ=60)
                                        CATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGGACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAAAAAGC                                                        >  SRR4302540.1077463/1‑94 (MQ=60)
                                        CATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGC                                                        >  SRR4302540.10120450/1‑94 (MQ=60)
                                         ATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCC                                                       <  SRR4302540.953789/94‑1 (MQ=60)
                                         ATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCC                                                       >  SRR4302540.1479968/1‑94 (MQ=60)
                                         ATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCC                                                       >  SRR4302540.5902887/1‑94 (MQ=60)
                                         ATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCC                                                       >  SRR4302540.6319945/1‑94 (MQ=60)
                                         ATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCC                                                       >  SRR4302540.6319946/1‑94 (MQ=60)
                                          tccgtCAAACTCCGTACAGAGAGGATAAAATTCGCTCAATCATGGCCCCT‑TTCGCTAAAGCATGCAAGCCAGGACTTTGCGAACAAACAAGCCA                                                      <  SRR4302540.8817176/89‑1 (MQ=60)
                                          TCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATTGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCA                                                      <  SRR4302540.8846129/94‑1 (MQ=60)
                                          TCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCA                                                      <  SRR4302540.8846130/94‑1 (MQ=60)
                                           CGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCCCCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCAT                                                     <  SRR4302540.3607540/94‑1 (MQ=60)
                                           CGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCAT                                                     <  SRR4302540.6410323/94‑1 (MQ=60)
                                            GGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATC                                                    <  SRR4302540.1498741/94‑1 (MQ=60)
                                            GGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATC                                                    <  SRR4302540.2859959/94‑1 (MQ=60)
                                            GGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATC                                                    <  SRR4302540.3763905/94‑1 (MQ=60)
                                             GGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCG                                                   <  SRR4302540.2088430/94‑1 (MQ=60)
                                             GGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCG                                                   <  SRR4302540.9472141/94‑1 (MQ=60)
                                             GGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCG                                                   <  SRR4302540.9698370/94‑1 (MQ=60)
                                              GCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGA                                                  >  SRR4302540.8360328/1‑94 (MQ=60)
                                              GCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGA                                                  >  SRR4302540.9487933/1‑94 (MQ=60)
                                               GAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGAC                                                 <  SRR4302540.8499326/94‑1 (MQ=60)
                                               GAAACTCCGTACAGAGAGGAAAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGAC                                                 <  SRR4302540.8200985/94‑1 (MQ=60)
                                               CAACCTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGAC                                                 <  SRR4302540.8006294/94‑1 (MQ=60)
                                               CAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGAG                                                 >  SRR4302540.2444345/1‑94 (MQ=60)
                                               CAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGAC                                                 >  SRR4302540.6753784/1‑94 (MQ=60)
                                               CAAACTCCGTACAGAGAGGAGAAAATTCGCGAAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGAC                                                 <  SRR4302540.7338210/94‑1 (MQ=60)
                                                AAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACG                                                >  SRR4302540.7696777/1‑94 (MQ=60)
                                                 AACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGG                                               <  SRR4302540.9856644/94‑1 (MQ=60)
                                                 AACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGG                                               >  SRR4302540.7535527/1‑94 (MQ=60)
                                                  ACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGACATCGACGGC                                              >  SRR4302540.6868205/1‑94 (MQ=60)
                                                   CTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCA                                             >  SRR4302540.6594826/1‑94 (MQ=60)
                                                   CGCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCA                                             <  SRR4302540.2648162/94‑1 (MQ=60)
                                                    TCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGCCGGCAC                                            >  SRR4302540.6655518/1‑94 (MQ=60)
                                                      CGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCATGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCA                                          >  SRR4302540.9332117/1‑94 (MQ=60)
                                                       GTACAGAGAGGAGAAAATTCGCGCAATCATGGCCCCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAA                                         <  SRR4302540.6961694/94‑1 (MQ=60)
                                                       GTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAA                                         >  SRR4302540.7045130/1‑94 (MQ=60)
                                                        TACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAA                                        <  SRR4302540.5177253/94‑1 (MQ=60)
                                                         ACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAAC                                       <  SRR4302540.2397734/94‑1 (MQ=60)
                                                         ACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAAC                                       <  SRR4302540.5922013/94‑1 (MQ=60)
                                                          CAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACG                                      >  SRR4302540.1479957/1‑94 (MQ=60)
                                                           AGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGG                                     <  SRR4302540.9872437/94‑1 (MQ=60)
                                                            GAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGT                                    <  SRR4302540.4799186/94‑1 (MQ=60)
                                                             AGAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTC                                   >  SRR4302540.8105229/1‑94 (MQ=60)
                                                              GAGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCA                                  >  SRR4302540.9218461/1‑94 (MQ=60)
                                                               AGGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCAT                                 >  SRR4302540.9670064/1‑94 (MQ=60)
                                                                GGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATA                                <  SRR4302540.5468927/94‑1 (MQ=60)
                                                                GGAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATA                                >  SRR4302540.1234389/1‑94 (MQ=60)
                                                                 GAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAA                               <  SRR4302540.6672710/94‑1 (MQ=60)
                                                                 GAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAA                               >  SRR4302540.2303306/1‑94 (MQ=60)
                                                                 GAGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAA                               >  SRR4302540.5161597/1‑94 (MQ=60)
                                                                 GAGAAAATTCGCGAAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAA                               <  SRR4302540.8959225/94‑1 (MQ=60)
                                                                  AGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAAT                              <  SRR4302540.2817571/94‑1 (MQ=60)
                                                                  AGAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAAT                              <  SRR4302540.1986383/94‑1 (MQ=60)
                                                                   GAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATA                             <  SRR4302540.6602409/94‑1 (MQ=60)
                                                                   GAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATA                             >  SRR4302540.10160274/1‑94 (MQ=60)
                                                                   GAAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATA                             <  SRR4302540.2710009/94‑1 (MQ=60)
                                                                    AAAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAA                            >  SRR4302540.9514843/1‑94 (MQ=60)
                                                                     AAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAG                           >  SRR4302540.1735287/1‑94 (MQ=60)
                                                                     AAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAG                           >  SRR4302540.10048268/1‑94 (MQ=60)
                                                                     AAATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAG                           <  SRR4302540.3793327/94‑1 (MQ=60)
                                                                     AAATGCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAG                           <  SRR4302540.3793328/94‑1 (MQ=60)
                                                                      AATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGA                          <  SRR4302540.9223751/94‑1 (MQ=60)
                                                                      AATACGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGA                          <  SRR4302540.4009390/94‑1 (MQ=60)
                                                                       ATTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAA                         <  SRR4302540.5285317/94‑1 (MQ=60)
                                                                        TTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAA                        <  SRR4302540.1220858/94‑1 (MQ=60)
                                                                        TTCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAA                        <  SRR4302540.7703834/94‑1 (MQ=60)
                                                                         TCGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAA                       <  SRR4302540.5546611/94‑1 (MQ=60)
                                                                          CGCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAAT                      <  SRR4302540.5798673/94‑1 (MQ=60)
                                                                           cccCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATC                     <  SRR4302540.665043/91‑1 (MQ=60)
                                                                           GCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATC                     >  SRR4302540.7400839/1‑94 (MQ=60)
                                                                           GCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATC                     <  SRR4302540.3253884/94‑1 (MQ=60)
                                                                           GCGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATC                     >  SRR4302540.4909235/1‑94 (MQ=60)
                                                                            CGCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCA                    <  SRR4302540.1802272/94‑1 (MQ=60)
                                                                             gaatTCATGGCACCTGTC‑GCTAAAGCGTGCAAGCCAGGTCTTTGCGAACAAACAAGCAATCGCCGGCACCAAGCGGTCATAATAAGAAAATCAA                   <  SRR4302540.3289708/90‑1 (MQ=60)
                                                                             GCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGCCGGCACCAAACGGTCATCATAAGAAAATCAA                   >  SRR4302540.1872848/1‑94 (MQ=60)
                                                                             GCAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAA                   >  SRR4302540.2722082/1‑94 (MQ=60)
                                                                              CAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAA                  >  SRR4302540.5896466/1‑94 (MQ=60)
                                                                              CAATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAA                  <  SRR4302540.2917566/94‑1 (MQ=60)
                                                                                ATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACA                >  SRR4302540.3412387/1‑94 (MQ=60)
                                                                                ATCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACA                >  SRR4302540.3321348/1‑94 (MQ=60)
                                                                                 TCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAA               <  SRR4302540.1354846/94‑1 (MQ=60)
                                                                                 TCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAA               <  SRR4302540.7436228/94‑1 (MQ=60)
                                                                                 TCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAA               <  SRR4302540.7038447/94‑1 (MQ=60)
                                                                                 TCATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAA               <  SRR4302540.9760789/94‑1 (MQ=60)
                                                                                 ACATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAA               <  SRR4302540.2640437/94‑1 (MQ=60)
                                                                                  CATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACACACAAGCCATCGACGACACCACACGGTCATACTAAGAAAATCAAACAAT              >  SRR4302540.8869715/1‑94 (MQ=60)
                                                                                  CATGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAAT              >  SRR4302540.3580589/1‑94 (MQ=60)
                                                                                    TGGCACCT‑TTCGCTAAAGCGTGCAAGCGAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATAC            <  SRR4302540.3738976/94‑1 (MQ=60)
                                                                                    TGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATAC            <  SRR4302540.6542774/94‑1 (MQ=60)
                                                                                    TGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATAC            <  SRR4302540.1758442/94‑1 (MQ=60)
                                                                                    TGGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATAC            <  SRR4302540.6931228/94‑1 (MQ=60)
                                                                                     GGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACA           >  SRR4302540.3417880/1‑94 (MQ=60)
                                                                                     GGCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACA           <  SRR4302540.5138763/94‑1 (MQ=60)
                                                                                      GCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAG          <  SRR4302540.4586710/94‑1 (MQ=60)
                                                                                      GCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAG          <  SRR4302540.1972120/94‑1 (MQ=60)
                                                                                      GCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAG          >  SRR4302540.2636971/1‑94 (MQ=60)
                                                                                      GCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAG          <  SRR4302540.5626968/94‑1 (MQ=60)
                                                                                      GCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAG          <  SRR4302540.126066/94‑1 (MQ=60)
                                                                                      GCACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAA          >  SRR4302540.8419805/1‑94 (MQ=60)
                                                                                       CACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGC         >  SRR4302540.9387726/1‑94 (MQ=60)
                                                                                       CACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATAAAACAATACAGC         >  SRR4302540.2129151/1‑94 (MQ=60)
                                                                                        ACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCT        >  SRR4302540.4318251/1‑94 (MQ=60)
                                                                                        ACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCT        >  SRR4302540.3264598/1‑94 (MQ=60)
                                                                                        ACCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGCCATAATAAGAAAACCAAACAATACAGCA        >  SRR4302540.1207495/1‑94 (MQ=60)
                                                                                         CCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCTA       <  SRR4302540.4121311/94‑1 (MQ=60)
                                                                                         CCT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCTA       <  SRR4302540.4121312/94‑1 (MQ=60)
                                                                                          CT‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCTAA      <  SRR4302540.3167201/94‑1 (MQ=60)
                                                                                           T‑TTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCTAAC     <  SRR4302540.2597335/94‑1 (MQ=60)
                                                                                           T‑TC‑GCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCTAACA    >  SRR4302540.4113496/1‑94 (MQ=60)
                                                                                           T‑TC‑GCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCTAACA    >  SRR4302540.8320273/1‑94 (MQ=60)
                                                                                           T‑TC‑GCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCTAACA    >  SRR4302540.3877185/1‑94 (MQ=60)
                                                                                              |                                                                                              
CGAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCT‑TT‑GCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCTAACAGG  >  NC_000913/3107376‑3107562

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑