Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,112,040	T→C	A110A (GCA→GCG)	b2972 ←	putative peptidase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,112,040	0	T	C	100.0%	1143.8 / NA	355	A110A (GCA→GCG)	b2972	putative peptidase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (189/166); total (189/166)

Only 100 of 373 total aligned reads displayed.

ACTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAG  >  NC_000913/3111950‑3112129

acTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAgcgc                                                                                         <  2:9879444/93‑1 (MQ=255)

 cTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCt                                                                                        <  2:6241153/93‑1 (MQ=255)

 cTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCt                                                                                        <  1:8102412/93‑1 (MQ=255)

  ccgcgGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTg                                                                                       <  1:5204819/92‑1 (MQ=255)

     cgGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAACAAAGCAAGCGCTGTCa                                                                                    >  1:2658580/1‑93 (MQ=255)

      ggCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCaa                                                                                   >  1:4721985/1‑93 (MQ=255)

      ggCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCaa                                                                                   >  1:9338920/1‑93 (MQ=255)

       gCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAAt                                                                                  <  2:5613844/93‑1 (MQ=255)

         attCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATaa                                                                                <  2:6325079/91‑1 (MQ=255)

         aaTCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATaa                                                                                <  2:8833200/93‑1 (MQ=255)

            cAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTc                                                                             <  1:5687331/93‑1 (MQ=255)

             aGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTcc                                                                            >  1:4120015/1‑93 (MQ=255)

             aGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTcc                                                                            <  1:8374744/93‑1 (MQ=255)

              gCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTcca                                                                           <  2:768391/93‑1 (MQ=255)

              gCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTcca                                                                           >  1:9533532/1‑93 (MQ=255)

               ccAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTccac                                                                          <  2:9221471/93‑1 (MQ=255)

               caaGGCGGATAATATCATCTCCACCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTccac                                                                          <  2:7442376/91‑1 (MQ=255)

                cAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTccacc                                                                         >  1:5908538/1‑93 (MQ=255)

                cAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTccacc                                                                         >  1:8745453/1‑93 (MQ=255)

                 aGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTccacca                                                                        >  2:7169745/1‑93 (MQ=255)

                  ggCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAg                                                                       >  1:7116803/1‑93 (MQ=255)

                   gCGGATAATATCATCCCCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGc                                                                      <  2:5735523/93‑1 (MQ=255)

                   gCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGc                                                                      >  2:8533288/1‑93 (MQ=255)

                      gATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGa                                                                   >  2:7911682/1‑93 (MQ=255)

                      gATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGa                                                                   >  1:5495302/1‑93 (MQ=255)

                        aaataTCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATa                                                                 <  1:3172403/92‑1 (MQ=255)

                         aataTCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGTCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATaa                                                                <  2:9473579/93‑1 (MQ=255)

                         aataTCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATaa                                                                <  1:1281585/93‑1 (MQ=255)

                         aataTCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATaa                                                                >  2:6639676/1‑93 (MQ=255)

                          atatCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAAc                                                               <  2:6175328/93‑1 (MQ=255)

                          atatCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAAc                                                               <  1:3692127/93‑1 (MQ=255)

                          atacCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGCCTCGCCAGCAAAAAAGCACGCGCTGTCAATAACTCCACCAGCGGATAAc                                                               <  2:6785200/93‑1 (MQ=255)

                            atcatcACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGc                                                             >  2:3601650/1‑93 (MQ=255)

                            atcatcACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGc                                                             <  1:2218178/93‑1 (MQ=255)

                             tcatcaCCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCt                                                            <  2:9371295/93‑1 (MQ=255)

                              catcaCCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCtt                                                           >  2:5947015/1‑93 (MQ=255)

                                tcaCCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAACAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGc                                                         >  1:4794353/1‑93 (MQ=255)

                                tcaCCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGc                                                         >  2:871759/1‑93 (MQ=255)

                                tcaCCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGc                                                         <  1:4587783/93‑1 (MQ=255)

                                  aCCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTg                                                       >  1:729137/1‑93 (MQ=255)

                                   ccGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGa                                                      >  2:8428254/1‑93 (MQ=255)

                                   ccGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGa                                                      <  1:4344819/93‑1 (MQ=255)

                                    cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCCCCAGCGGATAACGCTTGCTGAt                                                     <  2:1525250/93‑1 (MQ=255)

                                      ccAGCCCCCATCCACTATCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGAttt                                                   <  2:1725447/93‑1 (MQ=255)

                                       cAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGAtttt                                                  <  1:1702113/93‑1 (MQ=255)

                                       cAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGAtttt                                                  >  1:346295/1‑93 (MQ=255)

                                         gCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCg                                                >  2:1275668/1‑93 (MQ=255)

                                         gCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCg                                                >  2:5309177/1‑93 (MQ=255)

                                          cccccATCCACTTTCCGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGc                                               <  1:7164227/93‑1 (MQ=255)

                                           ccccATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGcc                                              >  1:8531697/1‑93 (MQ=255)

                                            cccATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCt                                             <  2:6514441/93‑1 (MQ=255)

                                            cccATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCACCCAGCGGATAACGCTTGCTGATTTTCGCCt                                             >  1:1732389/1‑93 (MQ=255)

                                              cATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATaa                                                                                >  1:3954835/1‑56 (MQ=255)

                                              cATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATaa                                                                                <  2:3954835/56‑1 (MQ=255)

                                              cATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGa                                           >  1:6677798/1‑93 (MQ=255)

                                               aTCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGAc                                          <  1:10010221/93‑1 (MQ=255)

                                               aTCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGAc                                          <  2:4794352/93‑1 (MQ=255)

                                                tCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACa                                         >  2:3440132/1‑93 (MQ=255)

                                                 cctcTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAg                                        <  1:7516275/90‑1 (MQ=255)

                                                 ccACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAg                                        >  2:1653572/1‑93 (MQ=255)

                                                 ccACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAg                                        <  1:7019506/93‑1 (MQ=255)

                                                  cACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGt                                       >  1:6839036/1‑93 (MQ=255)

                                                   ccTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCCCCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTc                                      <  2:2905237/92‑1 (MQ=255)

                                                    cTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTcg                                     >  1:9103605/1‑93 (MQ=255)

                                                    cTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTcg                                     >  1:2040697/1‑93 (MQ=255)

                                                     tttCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTcgc                                    <  1:6124605/93‑1 (MQ=255)

                                                      ttCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTcgcg                                   >  2:2559097/1‑93 (MQ=255)

                                                         tGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCa                                <  1:1363605/93‑1 (MQ=255)

                                                         tGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCa                                <  1:9947093/93‑1 (MQ=255)

                                                          ggCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAg                               <  2:9112874/93‑1 (MQ=255)

                                                          ggCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAg                               <  2:8009280/93‑1 (MQ=255)

                                                          ggCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAg                               <  1:8265094/93‑1 (MQ=255)

                                                           gCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAgc                              >  2:691763/1‑93 (MQ=255)

                                                             cagaccagacTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAgcgc                            <  1:5264264/93‑1 (MQ=255)

                                                              agaccagacTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGcc                           >  2:5077099/1‑93 (MQ=255)

                                                              agaccagacTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGAAGCGcc                           >  1:7765362/1‑93 (MQ=255)

                                                               gaccagacTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGccc                          <  2:1926271/93‑1 (MQ=255)

                                                                 ccagacTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCtt                        <  2:1047392/93‑1 (MQ=255)

                                                                 ccagacTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCtt                        >  2:3162399/1‑93 (MQ=255)

                                                                 ccagacTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCtt                        <  2:3001785/93‑1 (MQ=255)

                                                                 ccagacTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCtt                        <  1:5022904/93‑1 (MQ=255)

                                                                  cagacTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCttt                       <  1:6534114/93‑1 (MQ=255)

                                                                   cgacTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTg                      <  1:2334128/92‑1 (MQ=255)

                                                                   agacTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTg                      >  2:806696/1‑93 (MQ=255)

                                                                   agacTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTg                      >  1:3839589/1‑93 (MQ=255)

                                                                    gacTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGa                     >  1:2993564/1‑93 (MQ=255)

                                                                    gacTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGa                     >  1:2488635/1‑93 (MQ=255)

                                                                    gacTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGa                     >  2:4630525/1‑93 (MQ=255)

                                                                     acTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAg                    >  1:7573674/1‑93 (MQ=255)

                                                                     acTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAg                    >  2:4100351/1‑93 (MQ=255)

                                                                       tCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCa                  <  2:6038381/93‑1 (MQ=255)

                                                                       tCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCa                  >  1:6936588/1‑93 (MQ=255)

                                                                         gCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATc                >  2:2353928/1‑93 (MQ=255)

                                                                          ccAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCa               >  2:430909/1‑93 (MQ=255)

                                                                            aGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGc             <  2:2702521/93‑1 (MQ=255)

                                                                             gCAAAAAAGCAAGCGCTGTCAATACCTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGcc            <  2:3737718/93‑1 (MQ=255)

                                                                               aaaaaaGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAg          <  2:7285891/93‑1 (MQ=255)

                                                                                aaaaaGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAgg         >  1:2871487/1‑93 (MQ=255)

                                                                                  aaaGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCCCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGgag       <  1:9994141/93‑1 (MQ=255)

                                                                                   aagcaagcGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGgaga      <  2:9708067/93‑1 (MQ=255)

ACTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAG  >  NC_000913/3111950‑3112129

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GACACTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGA  >  NC_000913/3111947‑3112133

GACACTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGC                                                                                               <  SRR4302540.4614811/94‑1 (MQ=60)

GACACTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGC                                                                                               <  SRR4302540.1831790/94‑1 (MQ=60)

 ACACTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCCCTTTCTGGCCCGACAAGCCTCGCCACCAAAAAAGCAAGCG                                                                                              >  SRR4302540.1266017/1‑94 (MQ=60)

 ACACTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCG                                                                                              <  SRR4302540.901225/94‑1 (MQ=60)

 ACACTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCG                                                                                              <  SRR4302540.3117341/94‑1 (MQ=60)

  CCCTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGC                                                                                             <  SRR4302540.430417/94‑1 (MQ=60)

   CCTCGCGGCAATCAGCCAGGCGGATAATATCATCCCCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCT                                                                                            <  SRR4302540.7203402/94‑1 (MQ=60)

   ACTCGCTGCAATCAGCTAGGCGAGTAATTTCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGCCCAGACTCGCCAGCAAAAAAGCAAGCGCT                                                                                            <  SRR4302540.4838264/94‑1 (MQ=60)

   ACTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCT                                                                                            <  SRR4302540.4838266/94‑1 (MQ=60)

    CTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTG                                                                                           <  SRR4302540.8196450/94‑1 (MQ=60)

    CTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTG                                                                                           >  SRR4302540.3940600/1‑94 (MQ=60)

    CTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTG                                                                                           >  SRR4302540.7221197/1‑94 (MQ=60)

     CCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGT                                                                                          <  SRR4302540.5261514/94‑1 (MQ=60)

      cgcggaaatcacccgggcgaaaaattccaccccccCCAGCCCCCACCCACTTTCGGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTC                                                                                         <  SRR4302540.7360898/59‑1 (MQ=60)

       GCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAACAAAGCAAGCGCTGTCA                                                                                        >  SRR4302540.2687430/1‑94 (MQ=60)

        CGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAA                                                                                       >  SRR4302540.9450221/1‑94 (MQ=60)

        CGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAA                                                                                       >  SRR4302540.4772422/1‑94 (MQ=60)

        CGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAA                                                                                       >  SRR4302540.3896569/1‑94 (MQ=60)

        CGGCAATCAGCCAGGCGAATAATATCATCCCCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAA                                                                                       <  SRR4302540.7316044/94‑1 (MQ=60)

          GCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATA                                                                                     >  SRR4302540.2963196/1‑94 (MQ=60)

           CAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAA                                                                                    <  SRR4302540.3134533/94‑1 (MQ=60)

            gggggggctggcgaATAATATCACCCCCGCCACCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAAC                                                                                   <  SRR4302540.157542/80‑1 (MQ=60)

            AATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAAC                                                                                   <  SRR4302540.5263280/94‑1 (MQ=60)

            AATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAAC                                                                                   <  SRR4302540.7231281/94‑1 (MQ=60)

            AATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAAC                                                                                   >  SRR4302540.4736242/1‑94 (MQ=60)

            AATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAAC                                                                                   >  SRR4302540.3733081/1‑94 (MQ=60)

            AATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAAC                                                                                   <  SRR4302540.9025194/94‑1 (MQ=60)

            AATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAAC                                                                                   <  SRR4302540.6735512/94‑1 (MQ=60)

             ATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACT                                                                                  >  SRR4302540.6028730/1‑94 (MQ=60)

              TCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAGAAAGCAAGCGCTGTCAATAACTC                                                                                 >  SRR4302540.6368241/1‑94 (MQ=60)

               CAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCC                                                                                >  SRR4302540.4164500/1‑94 (MQ=60)

               CAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCC                                                                                <  SRR4302540.5749934/94‑1 (MQ=60)

               CAGCCAGGCGGAGAATACCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCC                                                                                <  SRR4302540.5749933/94‑1 (MQ=60)

                AGCCAGGCGTATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGTCTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCA                                                                               <  SRR4302540.8471693/94‑1 (MQ=60)

                AGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCC                                                                               >  SRR4302540.7023361/1‑94 (MQ=60)

                AGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCA                                                                               <  SRR4302540.8471927/94‑1 (MQ=60)

                AGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCA                                                                               >  SRR4302540.9646395/1‑94 (MQ=60)

                 GCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCAC                                                                              <  SRR4302540.2384489/94‑1 (MQ=60)

                  CCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACC                                                                             >  SRR4302540.5973814/1‑94 (MQ=60)

                  CCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACC                                                                             >  SRR4302540.8846947/1‑94 (MQ=60)

                  CCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACC                                                                             >  SRR4302540.5198159/1‑94 (MQ=60)

                   CAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCA                                                                            >  SRR4302540.10096764/1‑94 (MQ=60)

                   CAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCA                                                                            >  SRR4302540.6991103/1‑94 (MQ=60)

                   CAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCA                                                                            <  SRR4302540.8219887/94‑1 (MQ=60)

                    AGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAG                                                                           >  SRR4302540.7196028/1‑94 (MQ=60)

                     GGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGC                                                                          <  SRR4302540.4089078/94‑1 (MQ=60)

                     GGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGC                                                                          >  SRR4302540.7767082/1‑94 (MQ=60)

                     GGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGC                                                                          >  SRR4302540.7125076/1‑94 (MQ=60)

                      GCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCG                                                                         <  SRR4302540.5916292/94‑1 (MQ=60)

                      GCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCG                                                                         <  SRR4302540.8402763/94‑1 (MQ=60)

                       CGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGG                                                                        >  SRR4302540.7463379/1‑94 (MQ=60)

                        GGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGA                                                                       >  SRR4302540.5555803/1‑94 (MQ=60)

                         GATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGCT                                                                      >  SRR4302540.2807191/1‑94 (MQ=60)

                          ATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATA                                                                     >  SRR4302540.1916849/1‑94 (MQ=60)

                           AAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAA                                                                    <  SRR4302540.3206892/94‑1 (MQ=60)

                            AATATCATCCCCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAAC                                                                   <  SRR4302540.7264584/94‑1 (MQ=60)

                            AATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAAC                                                                   <  SRR4302540.1294801/94‑1 (MQ=60)

                            AATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAAC                                                                   <  SRR4302540.1294809/94‑1 (MQ=60)

                            AATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAAC                                                                   <  SRR4302540.5548696/94‑1 (MQ=60)

                             atataacccCCGCCAGCCCCCATCCACTTTCTGGCCAGCCCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACG                                                                  <  SRR4302540.132709/85‑1 (MQ=60)

                             ATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACG                                                                  >  SRR4302540.3208353/1‑94 (MQ=60)

                             ATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACG                                                                  <  SRR4302540.3732450/94‑1 (MQ=60)

                             ATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACG                                                                  <  SRR4302540.3732451/94‑1 (MQ=60)

                             ATATCATCACCCCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACG                                                                  <  SRR4302540.124813/94‑1 (MQ=60)

                               ATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCT                                                                <  SRR4302540.2242101/94‑1 (MQ=60)

                                TCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATACCTCCACCAGCGGATAACGCTT                                                               <  SRR4302540.7601677/94‑1 (MQ=60)

                                TCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTT                                                               <  SRR4302540.7601678/94‑1 (MQ=60)

                                TCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTT                                                               >  SRR4302540.10047126/1‑94 (MQ=60)

                                TCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTT                                                               >  SRR4302540.5473708/1‑94 (MQ=60)

                                 CATCCCCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTG                                                              <  SRR4302540.8091794/94‑1 (MQ=60)

                                  ATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAACAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGC                                                             >  SRR4302540.4845640/1‑94 (MQ=60)

                                  ATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGC                                                             <  SRR4302540.2858047/94‑1 (MQ=60)

                                  ATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGC                                                             <  SRR4302540.3023900/94‑1 (MQ=60)

                                   TCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCT                                                            <  SRR4302540.4637189/94‑1 (MQ=60)

                                    CACCGCCATCCCCCATCCACTTGCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTG                                                           <  SRR4302540.9534487/94‑1 (MQ=60)

                                    CACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTG                                                           >  SRR4302540.736941/1‑94 (MQ=60)

                                    CACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTG                                                           <  SRR4302540.2317862/94‑1 (MQ=60)

                                     CCCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGA                                                          <  SRR4302540.7014393/94‑1 (MQ=60)

                                      CCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGAT                                                         <  SRR4302540.2667015/94‑1 (MQ=60)

                                      CCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGAT                                                         <  SRR4302540.4392109/94‑1 (MQ=60)

                                       CGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATT                                                        <  SRR4302540.3442001/94‑1 (MQ=60)

                                        GCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTT                                                       >  SRR4302540.6032513/1‑94 (MQ=60)

                                        GCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTT                                                       >  SRR4302540.4800841/1‑94 (MQ=60)

                                         CCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTT                                                      >  SRR4302540.9492294/1‑94 (MQ=60)

                                         CCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTT                                                      >  SRR4302540.349818/1‑94 (MQ=60)

                                          CAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTC                                                     <  SRR4302540.3823863/94‑1 (MQ=60)

                                          CAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTC                                                     <  SRR4302540.1720539/94‑1 (MQ=60)

                                          CAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTC                                                     <  SRR4302540.9341356/94‑1 (MQ=60)

                                          CAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTC                                                     >  SRR4302540.131398/1‑94 (MQ=60)

                                          CAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTC                                                     <  SRR4302540.4512920/94‑1 (MQ=60)

                                           AGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCG                                                    <  SRR4302540.9540886/94‑1 (MQ=60)

                                           AGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCG                                                    >  SRR4302540.7443998/1‑94 (MQ=60)

                                           AGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCG                                                    <  SRR4302540.4682328/94‑1 (MQ=60)

                                             CCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCC                                                  >  SRR4302540.4556001/1‑94 (MQ=60)

                                             CCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCC                                                  >  SRR4302540.8630826/1‑94 (MQ=60)

                                             CCCCCATCCACTTTCCGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCC                                                  <  SRR4302540.7244097/94‑1 (MQ=60)

                                              CCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCT                                                 >  SRR4302540.2109249/1‑94 (MQ=60)

                                              CCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCT                                                 >  SRR4302540.5912523/1‑94 (MQ=60)

                                              CCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCACCCAGCGGATAACGCTTGCTGATTTTCGCCT                                                 >  SRR4302540.1751087/1‑94 (MQ=60)

                                               CCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTG                                                <  SRR4302540.7142948/94‑1 (MQ=60)

                                               CCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTG                                                <  SRR4302540.8674227/94‑1 (MQ=60)

                                               CCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTG                                                >  SRR4302540.6113510/1‑94 (MQ=60)

                                               CCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTG                                                <  SRR4302540.6887163/94‑1 (MQ=60)

                                                CCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACaagcgctagatcggaagagcggttcagcaggaatgc                                               >  SRR4302540.3997515/1‑58 (MQ=60)

                                                CCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGA                                               >  SRR4302540.6751558/1‑94 (MQ=60)

                                                CCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGA                                               <  SRR4302540.7794778/94‑1 (MQ=60)

                                                CCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGA                                               >  SRR4302540.2596591/1‑94 (MQ=60)

                                                CCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGA                                               >  SRR4302540.181749/1‑94 (MQ=60)

                                                CCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGA                                               <  SRR4302540.2392927/94‑1 (MQ=60)

                                                 CATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGAC                                              >  SRR4302540.3651948/1‑94 (MQ=60)

                                                 CATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGAC                                              >  SRR4302540.848701/1‑94 (MQ=60)

                                                 CATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGAC                                              >  SRR4302540.2582736/1‑94 (MQ=60)

                                                 CATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGAC                                              <  SRR4302540.203336/94‑1 (MQ=60)

                                                  ATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATTACGCTTGCTGATCTTCGCCTGACA                                             >  SRR4302540.5282154/1‑94 (MQ=60)

                                                  ATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACA                                             >  SRR4302540.2103136/1‑94 (MQ=60)

                                                  ATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACA                                             >  SRR4302540.2339944/1‑94 (MQ=60)

                                                  ATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACA                                             <  SRR4302540.10126783/94‑1 (MQ=60)

                                                   TCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAG                                            <  SRR4302540.7075077/94‑1 (MQ=60)

                                                   TCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAG                                            >  SRR4302540.5609230/1‑94 (MQ=60)

                                                   TCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAG                                            >  SRR4302540.4857186/1‑94 (MQ=60)

                                                    CCTCTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGT                                           <  SRR4302540.7600314/94‑1 (MQ=60)

                                                    CCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGT                                           >  SRR4302540.9276731/1‑94 (MQ=60)

                                                    CCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGT                                           <  SRR4302540.7097470/94‑1 (MQ=60)

                                                    CCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGT                                           >  SRR4302540.6914784/1‑94 (MQ=60)

                                                     CACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTC                                          >  SRR4302540.967733/1‑94 (MQ=60)

                                                     CACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTC                                          >  SRR4302540.4138508/1‑94 (MQ=60)

                                                     CACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTC                                          >  SRR4302540.2249838/1‑94 (MQ=60)

                                                      CCTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCG                                         <  SRR4302540.6991239/94‑1 (MQ=60)

                                                      ACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCG                                         >  SRR4302540.2877540/1‑94 (MQ=60)

                                                      ACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCG                                         >  SRR4302540.3251382/1‑94 (MQ=60)

                                                      ACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCG                                         >  SRR4302540.2062685/1‑94 (MQ=60)

                                                      ACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCG                                         >  SRR4302540.9213000/1‑94 (MQ=60)

                                                      ACTTTCTGACCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCG                                         >  SRR4302540.6908033/1‑94 (MQ=60)

                                                        TTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCG                                       >  SRR4302540.1673810/1‑94 (MQ=60)

                                                        TTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCG                                       <  SRR4302540.6192818/94‑1 (MQ=60)

                                                           CTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCA                                    <  SRR4302540.4942029/94‑1 (MQ=60)

                                                            TGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAG                                   <  SRR4302540.1378011/94‑1 (MQ=60)

                                                            TGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAG                                   <  SRR4302540.10063239/94‑1 (MQ=60)

                                                             GGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGC                                  <  SRR4302540.8361134/94‑1 (MQ=60)

                                                             GGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGC                                  <  SRR4302540.6266434/94‑1 (MQ=60)

                                                             GGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGC                                  <  SRR4302540.4239133/94‑1 (MQ=60)

                                                               CCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGC                                >  SRR4302540.5277122/1‑94 (MQ=60)

                                                                CAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCCCCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCC                               <  SRR4302540.4100079/94‑1 (MQ=60)

                                                                CAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCC                               <  SRR4302540.5321708/94‑1 (MQ=60)

                                                                CAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGAGCC                               >  SRR4302540.6926486/1‑94 (MQ=60)

                                                                CAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGAAGCGCC                               >  SRR4302540.7856141/1‑94 (MQ=60)

                                                                 AGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCC                              >  SRR4302540.5366143/1‑94 (MQ=60)

                                                                  GACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCT                             >  SRR4302540.8775805/1‑94 (MQ=60)

                                                                  GACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCT                             >  SRR4302540.9160296/1‑94 (MQ=60)

                                                                   ACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTT                            >  SRR4302540.1322920/1‑94 (MQ=60)

                                                                    CCCGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTT                           <  SRR4302540.5077278/94‑1 (MQ=60)

                                                                    CCAGCCTCGCCAGCAAAAAAGCAAGCGCTGTCAATACCTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTT                           <  SRR4302540.6614782/94‑1 (MQ=60)

                                                                    CCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCGCCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTT                           <  SRR4302540.4350395/94‑1 (MQ=60)

                                                                    CCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTT                           <  SRR4302540.5077276/94‑1 (MQ=60)

                                                                    CCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTT                           <  SRR4302540.8003201/94‑1 (MQ=60)

                                                                    CCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTT                           <  SRR4302540.4350394/94‑1 (MQ=60)

                                                                     CAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTG                          >  SRR4302540.3881347/1‑94 (MQ=60)

                                                                     CAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTG                          <  SRR4302540.6606643/94‑1 (MQ=60)

                                                                     CAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTG                          >  SRR4302540.10110289/1‑94 (MQ=60)

                                                                     CAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTG                          >  SRR4302540.6893631/1‑94 (MQ=60)

                                                                     CAGACTCGCCAGCAAAAAACCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTG                          <  SRR4302540.9261234/94‑1 (MQ=60)

                                                                      CGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGA                         <  SRR4302540.2359277/94‑1 (MQ=60)

                                                                      AGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGA                         >  SRR4302540.3026565/1‑94 (MQ=60)

                                                                      AGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGA                         >  SRR4302540.2515439/1‑94 (MQ=60)

                                                                       GACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAG                        <  SRR4302540.8805422/94‑1 (MQ=60)

                                                                       GACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAG                        >  SRR4302540.7658644/1‑94 (MQ=60)

                                                                        ACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCTCGGCAGCGCCCTTTGAGC                       <  SRR4302540.8474850/94‑1 (MQ=60)

                                                                        ACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGC                       <  SRR4302540.9966574/94‑1 (MQ=60)

                                                                        ACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGC                       >  SRR4302540.7763012/1‑94 (MQ=60)

                                                                         CTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCA                      >  SRR4302540.7013798/1‑94 (MQ=60)

                                                                          TCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCAT                     <  SRR4302540.7317687/94‑1 (MQ=60)

                                                                            GCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCA                   <  SRR4302540.8343836/94‑1 (MQ=60)

                                                                            GCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCA                   <  SRR4302540.8446959/94‑1 (MQ=60)

                                                                            GCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCA                   >  SRR4302540.4982751/1‑94 (MQ=60)

                                                                             CCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAG                  <  SRR4302540.759335/94‑1 (MQ=60)

                                                                             CCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAG                  <  SRR4302540.8560506/94‑1 (MQ=60)

                                                                               AGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCC                >  SRR4302540.3923417/1‑94 (MQ=60)

                                                                               AGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCC                >  SRR4302540.1739640/1‑94 (MQ=60)

                                                                               AGCAAAAAAGCAAGCCCTGTCAATATCTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCC                <  SRR4302540.1607476/94‑1 (MQ=60)

                                                                                GCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCA               >  SRR4302540.1214188/1‑94 (MQ=60)

                                                                                ACAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTCCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCA               <  SRR4302540.8156904/94‑1 (MQ=60)

                                                                                 CAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAG              <  SRR4302540.5852373/94‑1 (MQ=60)

                                                                                 CAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAG              >  SRR4302540.2925122/1‑94 (MQ=60)

                                                                                 CAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAG              <  SRR4302540.3053417/94‑1 (MQ=60)

                                                                                  AAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGG             >  SRR4302540.3697383/1‑94 (MQ=60)

                                                                                  AAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGG             >  SRR4302540.2902688/1‑94 (MQ=60)

                                                                                  AAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGG             >  SRR4302540.1621737/1‑94 (MQ=60)

                                                                                     AAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGA          >  SRR4302540.4655811/1‑94 (MQ=60)

                                                                                     AAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCCCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGA          <  SRR4302540.10110609/94‑1 (MQ=60)

                                                                                        GCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCGGCGCCCTTTGAGCATCAGCCAGGAGAACA       >  SRR4302540.2110464/1‑94 (MQ=60)

                                                                                        GCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACA       <  SRR4302540.6326526/94‑1 (MQ=60)

                                                                                        GCAAGCGCGGTCAATAACTCCACCAGCGGATAGCGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACA       <  SRR4302540.6326529/94‑1 (MQ=60)

                                                                                         CAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAG      <  SRR4302540.1732492/94‑1 (MQ=60)

                                                                                             CGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGA  >  SRR4302540.3914271/1‑94 (MQ=60)

                                                                                             CGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGA  >  SRR4302540.3132327/1‑94 (MQ=60)

                                                                                             CGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGA  >  SRR4302540.9616994/1‑94 (MQ=60)

                                                                                             CGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGA  <  SRR4302540.5236924/94‑1 (MQ=60)

                                                                                             CGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGA  <  SRR4302540.5854476/94‑1 (MQ=60)

GACACTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGA  >  NC_000913/3111947‑3112133

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`