Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGCTCATCTCGCTCGCCCCCGGCAGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTGCTGACCTCATCGCCGCG > NC_000913/3112686‑3112872
|
AGCTCATCTCGCTCGCCCCCGGCAGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGG > SRR4302540.4204243/1‑94 (MQ=60)
AGCTCATCTCGCTCGCCCCCGGCAGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGA > SRR4302540.5906628/1‑94 (MQ=60)
AGCTCATCTCGCTCGCCCCCGGCAGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGA < SRR4302540.600191/94‑1 (MQ=60)
CTCATCTCGCTCGCCCCCGGCAGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGG > SRR4302540.6382504/1‑94 (MQ=60)
TCATCTCGCTCGCCCCCGGCAGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGC < SRR4302540.5227010/94‑1 (MQ=60)
TCATCTCGCTCGCCCCCGGCAGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGC > SRR4302540.8701114/1‑94 (MQ=60)
ATCTCGCTCGCCCCCGGCAGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCAC > SRR4302540.10024631/1‑94 (MQ=60)
ATCTCGCTCGCCCCCGGCAGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCAC < SRR4302540.4242319/94‑1 (MQ=60)
ATCTCGCTCGCCCCCGGCAGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCAC > SRR4302540.5810190/1‑94 (MQ=60)
ATCTCGCTCGCCCCCGGCAGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCAC > SRR4302540.6745441/1‑94 (MQ=60)
TCGCTCGCCCCCGGCAGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACA < SRR4302540.107341/94‑1 (MQ=60)
TCGCTCGCCCCCGGCAGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACA < SRR4302540.6353432/94‑1 (MQ=60)
TCGCTCGCCCCCGGCAGCTGGTAAGCATGCGCGCCCTGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACA < SRR4302540.107342/94‑1 (MQ=60)
CGCTCGCCCCCGGCAGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAG > SRR4302540.3548446/1‑94 (MQ=60)
CGCTCGCCCCCGGCAGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAG > SRR4302540.7853209/1‑94 (MQ=60)
GCTCGCCCCCGGCAGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGC < SRR4302540.4966588/94‑1 (MQ=60)
CTCGCCCCCGGCAGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCA > SRR4302540.9118669/1‑94 (MQ=60)
CTCGCCCCCGGCAGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCA > SRR4302540.4184559/1‑94 (MQ=60)
CGCCCCCGGCAGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATC > SRR4302540.6804797/1‑94 (MQ=60)
GCCCCCGGCAGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATCA > SRR4302540.4377210/1‑94 (MQ=60)
CCCCGGCAGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGC > SRR4302540.9372027/1‑94 (MQ=60)
CCCGGCAGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCG < SRR4302540.1472256/94‑1 (MQ=60)
CCCGGCAGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCG > SRR4302540.5372504/1‑94 (MQ=60)
CCCGGCAGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGAGCGACCCAGGAGGCACACAGCATCAGCG > SRR4302540.1305281/1‑94 (MQ=60)
CCGGCAGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGT < SRR4302540.525436/94‑1 (MQ=60)
CCGGCAGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGT > SRR4302540.9721749/1‑94 (MQ=60)
CCGGCAGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGT < SRR4302540.1003584/94‑1 (MQ=60)
CGGCAGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTG < SRR4302540.4405693/94‑1 (MQ=60)
CGGCAGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTG > SRR4302540.3903551/1‑94 (MQ=60)
CGGCAGCTGGTAAGCATGCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTG < SRR4302540.5658711/94‑1 (MQ=60)
CAGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCC < SRR4302540.5000364/94‑1 (MQ=60)
AGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCG > SRR4302540.9781623/1‑94 (MQ=60)
AGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCG < SRR4302540.5289390/94‑1 (MQ=60)
CTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCT > SRR4302540.3983873/1‑94 (MQ=60)
CTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCT > SRR4302540.1809061/1‑94 (MQ=60)
CTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCT < SRR4302540.4395555/94‑1 (MQ=60)
TGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTG > SRR4302540.1215046/1‑94 (MQ=60)
TGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTG > SRR4302540.4840560/1‑94 (MQ=60)
TGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTG > SRR4302540.2911536/1‑94 (MQ=60)
TGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGAACCAGGAGGCACACAGCATCAGCGTGTCCGCTG > SRR4302540.2911537/1‑94 (MQ=60)
GTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCG > SRR4302540.7376842/1‑94 (MQ=60)
GTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCG < SRR4302540.4588375/94‑1 (MQ=60)
TAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGT > SRR4302540.7520407/1‑94 (MQ=60)
AGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTA > SRR4302540.2088164/1‑94 (MQ=60)
AGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTA > SRR4302540.8860587/1‑94 (MQ=60)
GCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTAC > SRR4302540.596278/1‑94 (MQ=60)
CATTCGCGCCCGGATTCCATTTCTTAAATAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACC < SRR4302540.1406687/94‑1 (MQ=60)
CATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACC < SRR4302540.1763568/94‑1 (MQ=60)
CATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACC < SRR4302540.6085269/94‑1 (MQ=60)
CATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACC < SRR4302540.7653971/94‑1 (MQ=60)
CATTCGCGCCCGGAGTCCATTTCTTAAAGAACTCCGAAAGATCCGGCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACC < SRR4302540.7081416/94‑1 (MQ=60)
ATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCG > SRR4302540.4303199/1‑94 (MQ=60)
ATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCG > SRR4302540.4336189/1‑94 (MQ=60)
ATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCG > SRR4302540.9835463/1‑94 (MQ=60)
ATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCG > SRR4302540.821568/1‑94 (MQ=60)
ATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCG < SRR4302540.6230044/94‑1 (MQ=60)
ATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCG > SRR4302540.9769460/1‑94 (MQ=60)
CGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGA < SRR4302540.6865886/94‑1 (MQ=60)
GCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGAT < SRR4302540.7291912/94‑1 (MQ=60)
GCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGAT < SRR4302540.631409/94‑1 (MQ=60)
GCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGAT > SRR4302540.474514/1‑94 (MQ=60)
CCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATT > SRR4302540.6018627/1‑94 (MQ=60)
CCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTCGATT > SRR4302540.6018628/1‑94 (MQ=60)
CCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATT < SRR4302540.10110675/94‑1 (MQ=60)
CCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATT < SRR4302540.1594595/94‑1 (MQ=60)
CGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCA < SRR4302540.3974061/94‑1 (MQ=60)
CGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCA > SRR4302540.429596/1‑94 (MQ=60)
CGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGCCCGCTGCGTTACCGTTGGATTCA > SRR4302540.9787604/1‑94 (MQ=60)
GGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAG < SRR4302540.2710900/94‑1 (MQ=60)
GGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAG > SRR4302540.4520492/1‑94 (MQ=60)
GGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAG < SRR4302540.9394839/94‑1 (MQ=60)
GATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGC < SRR4302540.1092983/94‑1 (MQ=60)
ATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCA < SRR4302540.9409457/94‑1 (MQ=60)
TTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGTGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCAC < SRR4302540.1784508/94‑1 (MQ=60)
TTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCAC < SRR4302540.2080095/94‑1 (MQ=60)
TTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCAC > SRR4302540.7202593/1‑94 (MQ=60)
TTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCAC < SRR4302540.8979110/94‑1 (MQ=60)
TTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCAC > SRR4302540.1893392/1‑94 (MQ=60)
TCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACA < SRR4302540.977193/94‑1 (MQ=60)
TCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACA > SRR4302540.3893141/1‑94 (MQ=60)
TCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACA > SRR4302540.925408/1‑94 (MQ=60)
CCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAG < SRR4302540.10095585/94‑1 (MQ=60)
CCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAG > SRR4302540.1704267/1‑94 (MQ=60)
CATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGT > SRR4302540.4986238/1‑94 (MQ=60)
CATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGT > SRR4302540.9854550/1‑94 (MQ=60)
CATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGT < SRR4302540.5542842/94‑1 (MQ=60)
ATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTA > SRR4302540.6522499/1‑94 (MQ=60)
ATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTA < SRR4302540.3849217/94‑1 (MQ=60)
ATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTA > SRR4302540.1829025/1‑94 (MQ=60)
ATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTA > SRR4302540.1314896/1‑94 (MQ=60)
ATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTA > SRR4302540.10094409/1‑94 (MQ=60)
TTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAA < SRR4302540.4799109/94‑1 (MQ=60)
TTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAAT > SRR4302540.955538/1‑94 (MQ=60)
TCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATT > SRR4302540.3947384/1‑94 (MQ=60)
TCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATT > SRR4302540.10084487/1‑94 (MQ=60)
TCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATT < SRR4302540.5159324/94‑1 (MQ=60)
CTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTC > SRR4302540.2643687/1‑94 (MQ=60)
TTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCT < SRR4302540.9797520/94‑1 (MQ=60)
TAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTT < SRR4302540.5876946/94‑1 (MQ=60)
TAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTT < SRR4302540.3481257/94‑1 (MQ=60)
TAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTT < SRR4302540.5535200/94‑1 (MQ=60)
AAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTG < SRR4302540.3791397/94‑1 (MQ=60)
AAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTG < SRR4302540.858929/94‑1 (MQ=60)
AAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTG < SRR4302540.620495/94‑1 (MQ=60)
AAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTG > SRR4302540.7340711/1‑94 (MQ=60)
AAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTG < SRR4302540.5046279/94‑1 (MQ=60)
AGAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCC < SRR4302540.3129988/94‑1 (MQ=60)
GAACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCG > SRR4302540.7043819/1‑94 (MQ=60)
ACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCC > SRR4302540.1139336/1‑94 (MQ=60)
ACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCC > SRR4302540.2826583/1‑94 (MQ=60)
ACTCCGAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCA > SRR4302540.7680699/1‑94 (MQ=60)
CCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAA > SRR4302540.6784138/1‑94 (MQ=60)
CGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGGAATTCTTGCCGCCAAAC > SRR4302540.9082147/1‑94 (MQ=60)
GAAAGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACT > SRR4302540.573164/1‑94 (MQ=60)
aaataaccatcggtgcgtCCCAGGAGGCACACAGCATCAGCGTGTCCTCTGCGTTTCCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTT < SRR4302540.5277344/76‑1 (MQ=60)
AAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTT < SRR4302540.5277343/94‑1 (MQ=60)
AGATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGT > SRR4302540.6728428/1‑94 (MQ=60)
GATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTC < SRR4302540.1990982/94‑1 (MQ=60)
ATCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCA > SRR4302540.1831521/1‑94 (MQ=60)
ATCCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCA > SRR4302540.3018856/1‑94 (MQ=60)
TCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCAT > SRR4302540.4913232/1‑94 (MQ=60)
TCCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCAT > SRR4302540.3624908/1‑94 (MQ=60)
CCGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATT < SRR4302540.5753912/94‑1 (MQ=60)
CCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATT < SRR4302540.5211440/94‑1 (MQ=60)
CGTCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTG < SRR4302540.5025740/94‑1 (MQ=60)
CGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTG < SRR4302540.4102957/94‑1 (MQ=60)
CGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTG < SRR4302540.4102956/94‑1 (MQ=60)
CGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTG > SRR4302540.2719523/1‑94 (MQ=60)
TCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTGCT < SRR4302540.6136469/94‑1 (MQ=60)
TCTGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGACCAGTAATTCTTGCCGCCAAACTTGTCATTGCT > SRR4302540.653661/1‑94 (MQ=60)
TCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTGCT > SRR4302540.3838185/1‑94 (MQ=60)
TCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTGCT < SRR4302540.1664832/94‑1 (MQ=60)
CTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTGCTG > SRR4302540.7670682/1‑94 (MQ=60)
TGGGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTGCTGA > SRR4302540.8077900/1‑94 (MQ=60)
TGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTGCTGA > SRR4302540.8798982/1‑94 (MQ=60)
TGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTGCTGA > SRR4302540.8488236/1‑94 (MQ=60)
GGCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTGCTGACC < SRR4302540.483701/94‑1 (MQ=60)
GCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTGCTGACCT < SRR4302540.537304/94‑1 (MQ=60)
GCGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTGCTGACCT < SRR4302540.6409623/94‑1 (MQ=60)
CGACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTGCTGACCTC > SRR4302540.3660033/1‑94 (MQ=60)
CGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTGCTGACCTC < SRR4302540.7200998/94‑1 (MQ=60)
ACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTGCTGACCTCAT > SRR4302540.6483996/1‑94 (MQ=60)
ACCCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTGCTGACCTCAT < SRR4302540.6687244/94‑1 (MQ=60)
ACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTGCTGACCTCAT > SRR4302540.6769834/1‑94 (MQ=60)
CCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTGCTGACCTCCTCG > SRR4302540.793115/1‑94 (MQ=60)
CCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTGCTGACCTCATCG < SRR4302540.864543/94‑1 (MQ=60)
CCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTGCTGACCTCATCG > SRR4302540.7966376/1‑94 (MQ=60)
CCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTGCTGACCTCATCG > SRR4302540.4215597/1‑94 (MQ=60)
CCAGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTGCTGACCTCATCG > SRR4302540.1813574/1‑94 (MQ=60)
CAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTGCTGACCTCATCGC > SRR4302540.2450300/1‑94 (MQ=60)
AGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTGCTGACCTCATCGCC > SRR4302540.5742869/1‑94 (MQ=60)
AGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTGCTGACCTCATCGCC < SRR4302540.6250021/94‑1 (MQ=60)
AGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTGCTGACCTCATCGCC > SRR4302540.4152724/1‑94 (MQ=60)
AGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTGCTGACCTCATCGCC > SRR4302540.10109448/1‑94 (MQ=60)
AGGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTGCTGACCTCATCGCC < SRR4302540.10104981/94‑1 (MQ=60)
AGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTGCTGACCTCATCGCC < SRR4302540.9147398/94‑1 (MQ=60)
GGGGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTGCTGACCTCATCGCCG < SRR4302540.6065489/94‑1 (MQ=60)
GGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTGCTGACCTCATCGCCG > SRR4302540.3805859/1‑94 (MQ=60)
GGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTGCTGACCTCATCGCCGCG > SRR4302540.7892161/1‑94 (MQ=60)
|
AGCTCATCTCGCTCGCCCCCGGCAGCTGGTAAGCATTCGCGCCCGGATTCCATTTCTTAAAGAACTCCGAAAGATCCGTCTGGGCGACCCAGGAGGCACACAGCATCAGCGTGTCCGCTGCGTTACCGTTGGATTCAGCACAGTAATTCTTGCCGCCAAACTTGTCATTGCTGACCTCATCGCCGCG > NC_000913/3112686‑3112872
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
