Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,127,469	G→A	G254G (GGC→GGT)	b2981 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,127,469	0	G	A	99.3%	1409.9 / NA	409	G254G (GGC→GGT)	b2981	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (0/1); major base A (216/189); minor base C (0/3); total (216/193)
Fisher's exact test for biased strand distribution p-value = 1.03e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 422 total aligned reads displayed.

GTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCGCCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCAT  >  NC_000913/3127379‑3127558

 ttCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCAccc                                                                                        <  2:6545701/93‑1 (MQ=255)

 ttCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCAccc                                                                                        <  2:1346244/93‑1 (MQ=255)

   cGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCAt                                                                                      <  1:5584025/93‑1 (MQ=255)

   cGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCAt                                                                                      <  2:8440387/93‑1 (MQ=255)

    ggCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATg                                                                                     <  1:3069389/93‑1 (MQ=255)

     gCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATgg                                                                                    <  2:6764756/93‑1 (MQ=255)

     gCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATgg                                                                                    <  1:2265417/93‑1 (MQ=255)

      cAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGt                                                                                   <  2:9109700/93‑1 (MQ=255)

        aGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTcg                                                                                 >  1:7160170/1‑93 (MQ=255)

          ccGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTcgcg                                                                               >  1:9451008/1‑93 (MQ=255)

           cGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGa                                                                              >  1:2908893/1‑93 (MQ=255)

            gACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGaa                                                                             <  2:4460232/93‑1 (MQ=255)

            gACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGaa                                                                             >  2:3156711/1‑93 (MQ=255)

             aCAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAAt                                                                            >  1:801270/1‑93 (MQ=255)

              cAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAAtt                                                                           >  2:4288403/1‑93 (MQ=255)

               aaTAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTc                                                                          >  2:7196046/1‑93 (MQ=255)

                 tAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCAt                                                                        <  2:10026926/93‑1 (MQ=255)

                 tAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCAt                                                                        >  1:5971001/1‑93 (MQ=255)

                 tAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCAt                                                                        <  2:9451803/93‑1 (MQ=255)

                  aaaCGCGCAGGGTGCAGAATCAATCTCAGCGGTATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATg                                                                       >  2:9752106/1‑93 (MQ=255)

                  aaaCGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATg                                                                       >  1:7342155/1‑93 (MQ=255)

                   aaCGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGt                                                                      <  1:1577309/93‑1 (MQ=255)

                    aCGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGtt                                                                     <  1:9358202/93‑1 (MQ=255)

                      gcgcAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCg                                                                   <  2:7048460/93‑1 (MQ=255)

                        gcAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCGCCCATGGTCGCGAATTCATGTTCGGt                                                                 <  1:2027205/93‑1 (MQ=255)

                        gcAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGt                                                                 <  1:4174946/93‑1 (MQ=255)

                          aGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTaa                                                               >  2:3681525/1‑93 (MQ=255)

                          aGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTaa                                                               <  1:6655863/93‑1 (MQ=255)

                           gggTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTaaa                                                              <  1:1690099/93‑1 (MQ=255)

                            ggTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAAc                                                             >  1:9144193/1‑93 (MQ=255)

                            ggTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAAc                                                             <  2:6362618/93‑1 (MQ=255)

                            ggTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAAc                                                             <  2:8255998/93‑1 (MQ=255)

                            ggTGCAGAATCAATCACAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAAc                                                             >  1:6975904/1‑93 (MQ=255)

                             gTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACg                                                            >  1:3971708/1‑93 (MQ=255)

                               gCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGc                                                          >  2:7990618/1‑93 (MQ=255)

                                 aGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGcac                                                        >  2:5252328/1‑93 (MQ=255)

                                   aatcaatcTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACaa                                                      >  1:5296550/1‑93 (MQ=255)

                                     tcaatcTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAAt                                                    >  2:5628688/1‑93 (MQ=255)

                                       aatcTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATcc                                                  >  2:4725172/1‑93 (MQ=255)

                                       aatcTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATcc                                                  <  1:1425978/93‑1 (MQ=255)

                                        atcTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATccc                                                 <  1:8335162/93‑1 (MQ=255)

                                            cAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGt                                             <  2:1740491/93‑1 (MQ=255)

                                            cAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGt                                             <  1:9665721/93‑1 (MQ=255)

                                             aGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGtt                                            >  1:5140913/1‑93 (MQ=255)

                                               cGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTtgt                                          <  1:10007508/93‑1 (MQ=255)

                                                gATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTtgtg                                         >  2:78932/1‑93 (MQ=255)

                                                gATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTtgtg                                         >  1:6285498/1‑93 (MQ=255)

                                                  tataGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGtgct                                       >  2:4030102/1‑93 (MQ=255)

                                                    taGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGtgctgc                                     <  1:7852931/93‑1 (MQ=255)

                                                    taGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGtgctgc                                     >  2:2934065/1‑93 (MQ=255)

                                                     aGATCATATCTTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTgcc                                    <  2:9208119/93‑1 (MQ=255)

                                                     aGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTgcc                                    <  1:8445071/93‑1 (MQ=255)

                                                     aGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTgcc                                    >  2:7395601/1‑93 (MQ=255)

                                                     aGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTgcc                                    <  1:5875996/93‑1 (MQ=255)

                                                       aTCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTgccag                                  >  2:9067999/1‑93 (MQ=255)

                                                        tCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCCGCTGTGCTgccagc                                 >  2:5712392/1‑93 (MQ=255)

                                                        tCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGGGCTgccagc                                 >  2:1145561/1‑93 (MQ=255)

                                                         cATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTgccagcc                                <  1:4775841/93‑1 (MQ=255)

                                                         cATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTgccagcc                                <  1:9246769/93‑1 (MQ=255)

                                                           tatCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGccagccag                              >  1:3884194/1‑93 (MQ=255)

                                                           tatCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGccagccag                              >  2:3073062/1‑93 (MQ=255)

                                                           tatCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGccagccag                              <  2:7628918/93‑1 (MQ=255)

                                                           tatCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTCCTGccagccag                              >  1:3673699/1‑93 (MQ=255)

                                                             tCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCagag                            <  2:3358434/93‑1 (MQ=255)

                                                             tCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCagag                            <  1:8258629/93‑1 (MQ=255)

                                                               gTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGtt                          <  2:3490064/93‑1 (MQ=255)

                                                               gTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGtt                          >  1:2746602/1‑93 (MQ=255)

                                                               gTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGtt                          >  1:4669061/1‑93 (MQ=255)

                                                                tCCGGCACCAGATATTTAAGTTGATCACCCATGGTGGCGAATTCCTGTTCGGGAAACGGCACAAATCCCCAGTTGTGCTCCCACCCATAGTTg                         >  1:3564260/1‑93 (MQ=255)

                                                                 ccGGCACCGGATATTTAAGTTGATCACCCTTGGTCGCGAGTTCATGTTCGGTAACCGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGa                        <  2:8960607/93‑1 (MQ=255)

                                                                 ccGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCACCCAGAGTTGa                        >  1:7477592/1‑93 (MQ=255)

                                                                    gCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGaaaa                     <  2:5061909/93‑1 (MQ=255)

                                                                    ccACCAGATATTTAAGTTGATCACCCATGGTCTCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGaaaa                     <  2:5469744/92‑1 (MQ=255)

                                                                      aCCAGATATTCAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAAtc                   <  1:6077474/93‑1 (MQ=255)

                                                                       ccAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAAtct                  >  2:9305218/1‑93 (MQ=255)

                                                                       ccAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAAtct                  >  1:1246360/1‑93 (MQ=255)

                                                                         aGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAAtctc                 <  1:3140180/92‑1 (MQ=255)

                                                                         aGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCa                >  2:15951/1‑93 (MQ=255)

                                                                           atatTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACg              >  1:6869068/1‑93 (MQ=255)

                                                                           atatTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACg              <  2:2713343/93‑1 (MQ=255)

                                                                            tatTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGc             >  1:5519646/1‑93 (MQ=255)

                                                                             atTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCa            >  2:3869215/1‑93 (MQ=255)

                                                                              tttAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAg           <  1:538621/93‑1 (MQ=255)

                                                                              tttAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAg           <  2:6975846/93‑1 (MQ=255)

                                                                              tttAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAg           >  1:7039873/1‑93 (MQ=255)

                                                                              tttAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAg           >  2:9598298/1‑93 (MQ=255)

                                                                              tttAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGGGCTGCCAGCCAGAGTTGAAAATCTCACGCAg           >  1:1617749/1‑93 (MQ=255)

                                                                               ttAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAgg          <  2:2136359/93‑1 (MQ=255)

                                                                               ttAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAgg          >  2:3570457/1‑93 (MQ=255)

                                                                               ttAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAgg          >  1:4470260/1‑93 (MQ=255)

                                                                               ttAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAgg          >  2:6060787/1‑93 (MQ=255)

                                                                               ttAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAgg          >  2:4938161/1‑93 (MQ=255)

                                                                                tAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGa         <  1:8884076/93‑1 (MQ=255)

                                                                                   gTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCt      >  1:7643219/1‑93 (MQ=255)

                                                                                    ttGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTg     >  1:2312811/1‑93 (MQ=255)

                                                                                     tGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGc    >  2:2422292/1‑93 (MQ=255)

                                                                                     tGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGc    <  2:8816031/93‑1 (MQ=255)

                                                                                     tGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGc    <  1:3380664/93‑1 (MQ=255)

                                                                                       aTCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCAt  <  2:1991669/93‑1 (MQ=255)

                                                                                       aTCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCAt  >  1:3738679/1‑93 (MQ=255)

GTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCGCCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCAT  >  NC_000913/3127379‑3127558

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 239 total aligned reads displayed.

GATGTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCGCCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCATCTCT  >  NC_000913/3127376‑3127562

GATGTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCA                                                                                               <  SRR4302540.1269061/94‑1 (MQ=60)

GATGTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCA                                                                                               <  SRR4302540.2844810/94‑1 (MQ=60)

 ATGTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCAC                                                                                              >  SRR4302540.1727542/1‑94 (MQ=60)

 ATGTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCAC                                                                                              <  SRR4302540.5468804/94‑1 (MQ=60)

 ATGTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCAC                                                                                              >  SRR4302540.5943786/1‑94 (MQ=60)

  TGTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACC                                                                                             <  SRR4302540.7506767/94‑1 (MQ=60)

   GTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCC                                                                                            >  SRR4302540.32327/1‑94 (MQ=60)

   GTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCC                                                                                            >  SRR4302540.8517630/1‑94 (MQ=60)

   GTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCC                                                                                            <  SRR4302540.9450151/94‑1 (MQ=60)

    TTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCA                                                                                           >  SRR4302540.7224537/1‑94 (MQ=60)

     TCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCAT                                                                                          <  SRR4302540.6506951/94‑1 (MQ=60)

      CGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATG                                                                                         >  SRR4302540.2240072/1‑94 (MQ=60)

      CGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATG                                                                                         <  SRR4302540.5645487/94‑1 (MQ=60)

       GGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGG                                                                                        <  SRR4302540.310164/94‑1 (MQ=60)

        GCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGT                                                                                       >  SRR4302540.7290001/1‑94 (MQ=60)

        GCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGT                                                                                       <  SRR4302540.2289728/94‑1 (MQ=60)

         CAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTC                                                                                      >  SRR4302540.6050816/1‑94 (MQ=60)

         CAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTC                                                                                      <  SRR4302540.958392/94‑1 (MQ=60)

          AAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCG                                                                                     >  SRR4302540.7239980/1‑94 (MQ=60)

          AAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCG                                                                                     >  SRR4302540.4750196/1‑94 (MQ=60)

            GCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCG                                                                                   <  SRR4302540.7526755/94‑1 (MQ=60)

            GCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCG                                                                                   >  SRR4302540.9563193/1‑94 (MQ=60)

            GCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCG                                                                                   >  SRR4302540.851863/1‑94 (MQ=60)

             CCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGA                                                                                  >  SRR4302540.8055713/1‑94 (MQ=60)

             CCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGA                                                                                  >  SRR4302540.2940670/1‑94 (MQ=60)

             CCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGGCCGGCACCAGATATTTAAGTTGATCACCCATCGTCGCGA                                                                                  >  SRR4302540.7191067/1‑94 (MQ=60)

              CGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAA                                                                                 >  SRR4302540.7689989/1‑94 (MQ=60)

               GACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAAT                                                                                >  SRR4302540.809779/1‑94 (MQ=60)

               GACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAAT                                                                                >  SRR4302540.7848797/1‑94 (MQ=60)

                ACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATT                                                                               <  SRR4302540.4738953/94‑1 (MQ=60)

                ACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATT                                                                               <  SRR4302540.8712627/94‑1 (MQ=60)

                  AATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCA                                                                             <  SRR4302540.2316425/94‑1 (MQ=60)

                   ATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCAT                                                                            >  SRR4302540.6815892/1‑94 (MQ=60)

                   ATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCAT                                                                            <  SRR4302540.8149448/94‑1 (MQ=60)

                   ATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCAT                                                                            >  SRR4302540.6037090/1‑94 (MQ=60)

                    aaaaccgccacggtggaaAATCAATCTCAGCTATATAGATCATAACGGCCGGCACCATATATTTAAGTTGATCCCCCATGGTCGCGAATTCATG                                                                           <  SRR4302540.3471535/76‑1 (MQ=60)

                    TAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATG                                                                           >  SRR4302540.7424077/1‑94 (MQ=60)

                    TAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATG                                                                           >  SRR4302540.3783804/1‑94 (MQ=60)

                     AAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGT                                                                          >  SRR4302540.9757181/1‑94 (MQ=60)

                     AAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGT                                                                          >  SRR4302540.9757180/1‑94 (MQ=60)

                      AACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTT                                                                         <  SRR4302540.1594562/94‑1 (MQ=60)

                       ACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTC                                                                        <  SRR4302540.9469653/94‑1 (MQ=60)

                        CGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCG                                                                       >  SRR4302540.3514534/1‑94 (MQ=60)

                        CGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCG                                                                       <  SRR4302540.7113582/94‑1 (MQ=60)

                        CGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCG                                                                       <  SRR4302540.7113581/94‑1 (MQ=60)

                         GCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGG                                                                      <  SRR4302540.4193415/94‑1 (MQ=60)

                          CGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGT                                                                     >  SRR4302540.1907162/1‑94 (MQ=60)

                           GCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCGCCCATGGTCGCGAATTCATGTTCGGTA                                                                    <  SRR4302540.2049099/94‑1 (MQ=60)

                           GCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTA                                                                    >  SRR4302540.3134496/1‑94 (MQ=60)

                            CAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAA                                                                   <  SRR4302540.2844030/94‑1 (MQ=60)

                            CAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAA                                                                   >  SRR4302540.3465058/1‑94 (MQ=60)

                             AGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAA                                                                  >  SRR4302540.9305580/1‑94 (MQ=60)

                             AGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAA                                                                  <  SRR4302540.3756162/94‑1 (MQ=60)

                             AGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAA                                                                  <  SRR4302540.6729471/94‑1 (MQ=60)

                             AGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAA                                                                  >  SRR4302540.6201804/1‑94 (MQ=60)

                             AGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAA                                                                  >  SRR4302540.6339383/1‑94 (MQ=60)

                             AGGGGGCAGAATCAATCTCAGCGATATAGATCATATCGGCCGGCACCAGAAATTTAAGTGGATCACCCATGGccgctatgtcagggtcggtaaa                                                                  >  SRR4302540.9069252/1‑72 (MQ=60)

                              GGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAAC                                                                 <  SRR4302540.9536254/94‑1 (MQ=60)

                              GGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAAC                                                                 >  SRR4302540.9254035/1‑94 (MQ=60)

                              GGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAAC                                                                 <  SRR4302540.1708428/94‑1 (MQ=60)

                              GGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAAC                                                                 >  SRR4302540.7053421/1‑94 (MQ=60)

                              GAGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCCCCCATGGTCGCGAATTCATGTTCGGTAAAC                                                                 <  SRR4302540.2201190/94‑1 (MQ=60)

                               GGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACG                                                                <  SRR4302540.658993/94‑1 (MQ=60)

                               GGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACG                                                                >  SRR4302540.9277809/1‑94 (MQ=60)

                               GGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACG                                                                >  SRR4302540.4014520/1‑94 (MQ=60)

                                GTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGG                                                               >  SRR4302540.5155640/1‑94 (MQ=60)

                                 gcgAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGC                                                              <  SRR4302540.3608946/91‑1 (MQ=60)

                                 TGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGC                                                              >  SRR4302540.3739890/1‑94 (MQ=60)

                                 TGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGC                                                              <  SRR4302540.8080902/94‑1 (MQ=60)

                                   CAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCAC                                                            >  SRR4302540.7469897/1‑94 (MQ=60)

                                   CAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCAC                                                            <  SRR4302540.7293131/94‑1 (MQ=60)

                                    AGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACA                                                           >  SRR4302540.7566399/1‑94 (MQ=60)

                                    AGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACA                                                           >  SRR4302540.5961266/1‑94 (MQ=60)

                                    AGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACA                                                           >  SRR4302540.8043990/1‑94 (MQ=60)

                                     GAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAA                                                          >  SRR4302540.5354488/1‑94 (MQ=60)

                                     GAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAA                                                          >  SRR4302540.2982034/1‑94 (MQ=60)

                                     GAATCAATCTAAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAA                                                          >  SRR4302540.10008371/1‑94 (MQ=60)

                                      AATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAA                                                         >  SRR4302540.4243462/1‑94 (MQ=60)

                                       ATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCCCCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAAT                                                        <  SRR4302540.2956575/94‑1 (MQ=60)

                                       ATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAAT                                                        <  SRR4302540.2956574/94‑1 (MQ=60)

                                       ATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAAT                                                        >  SRR4302540.9010765/1‑94 (MQ=60)

                                       ATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAAT                                                        <  SRR4302540.4531730/94‑1 (MQ=60)

                                       AGCAATCTCAGCGATATAGGTCATATCGTCCGGCACCAGATATGTAAGTTGATCCCCCATGGTCGCGAATTCAGGTTCGGTAAACGGCACAAAT                                                        <  SRR4302540.5472005/94‑1 (MQ=60)

                                         CAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCC                                                      >  SRR4302540.10072330/1‑94 (MQ=60)

                                         CAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCC                                                      >  SRR4302540.10026011/1‑94 (MQ=60)

                                          AATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCC                                                     >  SRR4302540.1249544/1‑94 (MQ=60)

                                          AATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCC                                                     <  SRR4302540.1441414/94‑1 (MQ=60)

                                           ATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCC                                                    >  SRR4302540.1663206/1‑94 (MQ=60)

                                           ATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCC                                                    <  SRR4302540.8431913/94‑1 (MQ=60)

                                           ATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCC                                                    <  SRR4302540.2210785/94‑1 (MQ=60)

                                           ATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCC                                                    >  SRR4302540.9508855/1‑94 (MQ=60)

                                            TCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCA                                                   <  SRR4302540.5631454/94‑1 (MQ=60)

                                            TCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCA                                                   <  SRR4302540.5631453/94‑1 (MQ=60)

                                            TCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCA                                                   <  SRR4302540.6801535/94‑1 (MQ=60)

                                             CTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAG                                                  >  SRR4302540.9312312/1‑94 (MQ=60)

                                             CTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAG                                                  >  SRR4302540.5357851/1‑94 (MQ=60)

                                              TCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGT                                                 <  SRR4302540.129604/94‑1 (MQ=60)

                                              TCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGT                                                 >  SRR4302540.2820256/1‑94 (MQ=60)

                                              TCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGT                                                 >  SRR4302540.2820255/1‑94 (MQ=60)

                                               CAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTT                                                >  SRR4302540.5196598/1‑94 (MQ=60)

                                               CAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTT                                                <  SRR4302540.7798763/94‑1 (MQ=60)

                                               CAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTT                                                <  SRR4302540.3936657/94‑1 (MQ=60)

                                               CAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTT                                                <  SRR4302540.9779479/94‑1 (MQ=60)

                                                AGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTG                                               >  SRR4302540.9012864/1‑94 (MQ=60)

                                                 GCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGT                                              <  SRR4302540.8379589/94‑1 (MQ=60)

                                                 GCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGT                                              <  SRR4302540.3965252/94‑1 (MQ=60)

                                                  CGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTG                                             >  SRR4302540.6355451/1‑94 (MQ=60)

                                                  CGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTG                                             <  SRR4302540.10124058/94‑1 (MQ=60)

                                                    ATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAANCNNCACAAATCCCCAGTTGTGCT                                           >  SRR4302540.2611751/1‑94 (MQ=60)

                                                    ATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCT                                           <  SRR4302540.5268012/94‑1 (MQ=60)

                                                    ATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCT                                           <  SRR4302540.7763081/94‑1 (MQ=60)

                                                    ATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCT                                           <  SRR4302540.5975313/94‑1 (MQ=60)

                                                     TATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTG                                          <  SRR4302540.2314677/94‑1 (MQ=60)

                                                      ATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGC                                         >  SRR4302540.10161353/1‑94 (MQ=60)

                                                       TAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCC                                        <  SRR4302540.7944690/94‑1 (MQ=60)

                                                        AGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCA                                       <  SRR4302540.5940948/94‑1 (MQ=60)

                                                        AGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCA                                       <  SRR4302540.8543107/94‑1 (MQ=60)

                                                        AGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCA                                       <  SRR4302540.4530251/94‑1 (MQ=60)

                                                         GATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAG                                      <  SRR4302540.2673301/94‑1 (MQ=60)

                                                          ATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGC                                     >  SRR4302540.8250863/1‑94 (MQ=60)

                                                          ATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGC                                     >  SRR4302540.1628395/1‑94 (MQ=60)

                                                           TCATATGATCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCC                                    <  SRR4302540.6993569/94‑1 (MQ=60)

                                                           TCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCC                                    <  SRR4302540.5056568/94‑1 (MQ=60)

                                                            CATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCA                                   <  SRR4302540.4335055/94‑1 (MQ=60)

                                                            CATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCA                                   <  SRR4302540.9357484/94‑1 (MQ=60)

                                                            CATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCA                                   <  SRR4302540.4826868/94‑1 (MQ=60)

                                                            CATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCA                                   >  SRR4302540.5615519/1‑94 (MQ=60)

                                                             ATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAG                                  >  SRR4302540.6993772/1‑94 (MQ=60)

                                                             ATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAG                                  <  SRR4302540.8427473/94‑1 (MQ=60)

                                                             ATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAG                                  >  SRR4302540.3926392/1‑94 (MQ=60)

                                                             ATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAG                                  >  SRR4302540.6993770/1‑94 (MQ=60)

                                                             ATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTCCTGCCAGCCAG                                  >  SRR4302540.3713873/1‑94 (MQ=60)

                                                             ATAACGGCCGGCACCAGATATTTAAGTTGATCCCCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAG                                  <  SRR4302540.8427474/94‑1 (MQ=60)

                                                               ATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAG                                <  SRR4302540.5094384/94‑1 (MQ=60)

                                                               ATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAG                                >  SRR4302540.1447605/1‑94 (MQ=60)

                                                               ATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAG                                <  SRR4302540.369672/94‑1 (MQ=60)

                                                               ATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAG                                >  SRR4302540.7379383/1‑94 (MQ=60)

                                                                TCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGT                               <  SRR4302540.8354603/94‑1 (MQ=60)

                                                                 CGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTT                              >  SRR4302540.1624515/1‑94 (MQ=60)

                                                                 CGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTT                              >  SRR4302540.4719035/1‑94 (MQ=60)

                                                                 CGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTT                              >  SRR4302540.2776268/1‑94 (MQ=60)

                                                                  GTCCGGCACCAGATATTTAAGTTGATCACCCATGGTGGCGAATTCCTGTTCGGGAAACGGCACAAATCCCCAGTTGTGCTCCCACCCATAGTTG                             >  SRR4302540.3603196/1‑94 (MQ=60)

                                                                  GTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTG                             <  SRR4302540.3248465/94‑1 (MQ=60)

                                                                  GTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTG                             <  SRR4302540.9767913/94‑1 (MQ=60)

                                                                   TCCGGCACCAGATATTTACGTTGATCGCCCATGGTCGCGAAGTCATGTCCGGTAcccggcagaaaggaccagttgcgctcacagcgcagcgtga                            >  SRR4302540.3896307/1‑54 (MQ=54)

                                                                   TCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGA                            >  SRR4302540.5429020/1‑94 (MQ=60)

                                                                   TCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCACCCAGAGTTGA                            >  SRR4302540.7561044/1‑94 (MQ=60)

                                                                     CGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAA                          <  SRR4302540.157454/94‑1 (MQ=60)

                                                                     CGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAA                          <  SRR4302540.1463222/94‑1 (MQ=60)

                                                                      GGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAA                         >  SRR4302540.547811/1‑94 (MQ=60)

                                                                      GGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAA                         <  SRR4302540.5802231/94‑1 (MQ=60)

                                                                       GCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAAT                        >  SRR4302540.569026/1‑94 (MQ=60)

                                                                       GCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAAT                        <  SRR4302540.1905763/94‑1 (MQ=60)

                                                                       GCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAAT                        >  SRR4302540.1353941/1‑94 (MQ=60)

                                                                        CACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATC                       >  SRR4302540.4114919/1‑94 (MQ=60)

                                                                        CACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATC                       >  SRR4302540.4114918/1‑94 (MQ=60)

                                                                        CACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATC                       >  SRR4302540.614351/1‑94 (MQ=60)

                                                                         ACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCT                      >  SRR4302540.1259075/1‑94 (MQ=60)

                                                                         ACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCT                      >  SRR4302540.1635547/1‑94 (MQ=60)

                                                                         ACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCT                      >  SRR4302540.8998424/1‑94 (MQ=60)

                                                                         ACCAGATATTCAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCT                      <  SRR4302540.6145052/94‑1 (MQ=60)

                                                                          CCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTC                     <  SRR4302540.6395400/94‑1 (MQ=60)

                                                                           CAGCTATTTAAGTTCATCCCCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCA                    <  SRR4302540.1647492/94‑1 (MQ=60)

                                                                           CAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCA                    <  SRR4302540.3174423/94‑1 (MQ=60)

                                                                             GATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACG                  <  SRR4302540.3771364/94‑1 (MQ=60)

                                                                             GATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACG                  >  SRR4302540.6945214/1‑94 (MQ=60)

                                                                             GATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACG                  <  SRR4302540.5360168/94‑1 (MQ=60)

                                                                              ATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGC                 >  SRR4302540.5580435/1‑94 (MQ=60)

                                                                               TATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCA                >  SRR4302540.5708407/1‑94 (MQ=60)

                                                                               TATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCA                <  SRR4302540.4775644/94‑1 (MQ=60)

                                                                                ATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAG               >  SRR4302540.3551679/1‑94 (MQ=60)

                                                                                ATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAG               >  SRR4302540.7118136/1‑94 (MQ=60)

                                                                                ATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGGGCTGCCAGCCAGAGTTGAAAATCTCACGCAG               >  SRR4302540.1635489/1‑94 (MQ=60)

                                                                                 TTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGG              <  SRR4302540.544447/94‑1 (MQ=60)

                                                                                 TTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGG              >  SRR4302540.4518735/1‑94 (MQ=60)

                                                                                   TAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGAT            <  SRR4302540.8986911/94‑1 (MQ=60)

                                                                                    AAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATC           <  SRR4302540.943626/94‑1 (MQ=60)

                                                                                     AGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCT          >  SRR4302540.7729243/1‑94 (MQ=60)

                                                                                      GTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTG         <  SRR4302540.5322587/94‑1 (MQ=60)

                                                                                      GTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTG         >  SRR4302540.2337706/1‑94 (MQ=60)

                                                                                       TTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGC        <  SRR4302540.9553682/94‑1 (MQ=60)

                                                                                       TTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGC        >  SRR4302540.6077701/1‑94 (MQ=60)

                                                                                        TGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCA       <  SRR4302540.4446300/94‑1 (MQ=60)

                                                                                        TGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCA       <  SRR4302540.3670670/94‑1 (MQ=60)

                                                                                        TGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCA       <  SRR4302540.3913570/94‑1 (MQ=60)

                                                                                        TGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCA       <  SRR4302540.8600346/94‑1 (MQ=60)

                                                                                        TGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCA       <  SRR4302540.3417573/94‑1 (MQ=60)

                                                                                         GATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCAT      >  SRR4302540.3779466/1‑94 (MQ=60)

                                                                                         GATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCAT      >  SRR4302540.316750/1‑94 (MQ=60)

                                                                                          ATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCATC     >  SRR4302540.9624713/1‑94 (MQ=60)

                                                                                          ATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCATC     <  SRR4302540.4161899/94‑1 (MQ=60)

                                                                                          ATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCATC     >  SRR4302540.9781827/1‑94 (MQ=60)

                                                                                           TCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCATCT    <  SRR4302540.6965359/94‑1 (MQ=60)

                                                                                           TCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCATCT    <  SRR4302540.5310475/94‑1 (MQ=60)

                                                                                            CACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCATCTC   >  SRR4302540.7252342/1‑94 (MQ=60)

                                                                                             CCCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCATCTCT  <  SRR4302540.7959414/94‑1 (MQ=60)

                                                                                             ACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCATCTCT  >  SRR4302540.9548692/1‑94 (MQ=60)

                                                                                             ACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCATCTCT  <  SRR4302540.7396519/94‑1 (MQ=60)

                                                                                             ACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCATCTCT  >  SRR4302540.2494121/1‑94 (MQ=60)

                                                                                             ACCCATGGTCCCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCATCTCT  >  SRR4302540.10008284/1‑94 (MQ=60)

GATGTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCGCCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCATCTCT  >  NC_000913/3127376‑3127562

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 5 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`