Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,352,410	C→T	I48I (ATC→ATT)	gltB →	glutamate synthase large subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,352,410	0	C	T	99.8%	1449.0 / ‑6.6	394	I48I (ATC→ATT)	gltB	glutamate synthase large subunit
Reads supporting (aligned to +/- strand): ref base C (0/1); new base T (222/171); total (222/172)
Fisher's exact test for biased strand distribution p-value = 4.37e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 401 total aligned reads displayed.

GAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATCGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGC  >  NC_000913/3352321‑3352499

  aGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCca                                                                                      <  2:1148310/93‑1 (MQ=255)

  aGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCca                                                                                      <  2:2725448/93‑1 (MQ=255)

   gTGGGGTTCCCGCTGAGCCTGGGGGAGGTTCACGATCTGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGccccc                                                                                     <  1:8952607/93‑3 (MQ=255)

    tGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCcaca                                                                                    <  2:6438831/93‑1 (MQ=255)

    tGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCcaca                                                                                    <  1:2370423/93‑1 (MQ=255)

    tGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCcaca                                                                                    <  1:9192985/93‑1 (MQ=255)

      gggTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATa                                                                                  >  1:3598015/1‑93 (MQ=255)

        gTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGa                                                                                <  2:718419/93‑1 (MQ=255)

         ttCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGaa                                                                               >  1:6881201/1‑93 (MQ=255)

            ccGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGc                                                                            >  1:9907388/1‑93 (MQ=255)

             cGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCg                                                                           >  2:7742441/1‑93 (MQ=255)

              gCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGa                                                                          <  2:4276113/93‑1 (MQ=255)

                agagCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAAc                                                                        <  2:2190119/93‑1 (MQ=255)

                agagCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAAc                                                                        <  2:8935111/93‑1 (MQ=255)

                agagCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAAc                                                                        >  2:6998772/1‑93 (MQ=255)

                 gagCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAAcc                                                                       <  2:5069277/93‑1 (MQ=255)

                   gCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTa                                                                     <  2:1265563/93‑1 (MQ=255)

                     cTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGc                                                                   >  1:2736990/1‑93 (MQ=255)

                     cTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGc                                                                   <  1:5865211/93‑1 (MQ=255)

                      tGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGcc                                                                  >  2:5408857/1‑93 (MQ=255)

                      tGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGcc                                                                  >  2:7117316/1‑93 (MQ=255)

                       gggggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGccc                                                                 >  2:6412150/1‑92 (MQ=255)

                       gggggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCca                                                                 >  1:6452247/1‑93 (MQ=255)

                        ggggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCcac                                                                <  1:4332818/93‑1 (MQ=255)

                         gggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCcaca                                                               >  1:7890602/1‑93 (MQ=255)

                         gggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCcaca                                                               <  2:8789275/93‑1 (MQ=255)

                          ggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACaa                                                              <  1:2991432/93‑1 (MQ=255)

                           gAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAg                                                             >  2:5874671/1‑93 (MQ=255)

                            aGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAgg                                                            >  1:3845747/1‑93 (MQ=255)

                             ggTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGCACCTAGCCACAAGGt                                                           >  2:9042326/1‑93 (MQ=255)

                             ggTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGt                                                           <  2:2392512/93‑1 (MQ=255)

                             ggTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGt                                                           >  2:9620090/1‑93 (MQ=255)

                             ggTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGt                                                           >  2:1989112/1‑93 (MQ=255)

                              gTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCTAACCTAGCCACAAGGTa                                                          >  2:1704878/1‑93 (MQ=255)

                              gTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTa                                                          <  2:9420103/93‑1 (MQ=255)

                              gTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTa                                                          >  1:7763110/1‑93 (MQ=255)

                               ttCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAg                                                         >  1:6038152/1‑93 (MQ=255)

                               ttCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAg                                                         <  1:8831053/93‑1 (MQ=255)

                                tCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGt                                                        >  1:10028240/1‑93 (MQ=255)

                                tCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGt                                                        >  1:5764287/1‑93 (MQ=255)

                                tCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGt                                                        >  2:7316019/1‑93 (MQ=255)

                                   cGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCg                                                     >  2:9789809/1‑93 (MQ=255)

                                   cGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCg                                                     >  1:4132707/1‑93 (MQ=255)

                                    gATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGt                                                    >  1:4674525/1‑93 (MQ=255)

                                     atatGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTa                                                   <  2:4528886/93‑1 (MQ=255)

                                     atatGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTa                                                   <  2:3169756/93‑1 (MQ=255)

                                     atatGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTa                                                   <  2:6154821/93‑1 (MQ=255)

                                      tatGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAc                                                  >  2:8545682/1‑93 (MQ=255)

                                      tatGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAc                                                  <  2:205776/93‑1 (MQ=255)

                                        tgttgtACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTg                                                >  2:4896022/1‑93 (MQ=255)

                                         gttgtACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGc                                               >  2:416949/1‑93 (MQ=255)

                                         gttgtACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGc                                               <  1:6638251/93‑1 (MQ=255)

                                         gttgtACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGc                                               <  1:680906/93‑1 (MQ=255)

                                           tgtACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCaa                                             >  1:500008/1‑93 (MQ=255)

                                            gtACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAAt                                            >  2:7641190/1‑93 (MQ=255)

                                            gtACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAAt                                            >  1:8598962/1‑93 (MQ=255)

                                            gtACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAAt                                            <  1:8250572/93‑1 (MQ=255)

                                             tACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATa                                           >  1:6115139/1‑93 (MQ=255)

                                             tACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATa                                           >  1:6548055/1‑93 (MQ=255)

                                              aCGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATac                                          >  2:8067305/1‑93 (MQ=255)

                                               cGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATaca                                         <  2:8231131/93‑1 (MQ=255)

                                                 aTAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACg                                       >  2:8432863/1‑93 (MQ=255)

                                                  tAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGc                                      <  1:9660727/93‑1 (MQ=255)

                                                   aaaTCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAAACTAGCCACAAGGTAGTGCGTACTGCAATACACGCa                                     <  1:1739771/93‑1 (MQ=255)

                                                    actCCCTTGACAGGGATAACTGTGGTTTGGGCTTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCAc                                    <  2:2963592/91‑1 (MQ=255)

                                                    aaTCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCAc                                    >  1:2859937/1‑93 (MQ=255)

                                                       cccTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCAAACC‑AGCCCCCAAGCAAGGGGTACTGCAATAAACCGACTGGc                                >  1:2060446/1‑93 (MQ=255)

                                                       cacTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTgg                                 <  2:6688036/91‑1 (MQ=255)

                                                         cTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGcc                               <  2:3952558/93‑1 (MQ=255)

                                                          ttGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGccc                              <  2:3053593/93‑1 (MQ=255)

                                                          ttGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGccc                              >  1:7142392/1‑93 (MQ=255)

                                                          ttGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGccc                              >  1:7447870/1‑93 (MQ=255)

                                                           tGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCg                             <  1:1105371/93‑1 (MQ=255)

                                                           tGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCg                             >  2:6299968/1‑93 (MQ=255)

                                                              gagGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCAt                          <  1:5931577/93‑1 (MQ=255)

                                                                gggATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATgc                        <  1:1555868/93‑1 (MQ=255)

                                                                 ggATACCTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATgca                       <  1:3305331/93‑1 (MQ=255)

                                                                  gATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATgcag                      <  2:3124939/93‑1 (MQ=255)

                                                                     aaCTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCAc                   <  2:1374698/93‑1 (MQ=255)

                                                                      aCTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCAcc                  >  1:4463294/1‑93 (MQ=255)

                                                                       cTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCg                 <  1:8000869/93‑1 (MQ=255)

                                                                       cTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCg                 >  2:3612550/1‑93 (MQ=255)

                                                                       cTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCg                 >  1:4288764/1‑93 (MQ=255)

                                                                       atgtgGTTTCGGCCTGATTGCCCACATAGAAGGCGAACATAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCg                 <  1:367648/92‑1 (MQ=255)

                                                                        tgtgGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGt                <  2:1740459/93‑1 (MQ=255)

                                                                        tgtgGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGt                >  2:1008989/1‑93 (MQ=255)

                                                                        tgtgGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTAGCCCGCATGCAGCACCGt                >  2:3785/1‑93 (MQ=255)

                                                                               tCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGa         >  1:2172413/1‑93 (MQ=255)

                                                                                cGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGAt        <  1:9784641/93‑1 (MQ=255)

                                                                                cGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCAAt        >  1:5534056/1‑93 (MQ=255)

                                                                                 ggCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGAtt       >  1:8427633/1‑93 (MQ=255)

                                                                                 ggCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGAtt       >  1:1678356/1‑93 (MQ=255)

                                                                                   ccTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATtct     <  1:4045266/93‑1 (MQ=255)

                                                                                   ccTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATtct     <  1:3154925/93‑1 (MQ=255)

                                                                                    cTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATtctc    <  1:6346225/93‑1 (MQ=255)

                                                                                    cTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATtctc    <  1:1784167/93‑1 (MQ=255)

                                                                                     tGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCg   >  1:3420888/1‑93 (MQ=255)

                                                                                     tGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCg   <  1:7859522/93‑1 (MQ=255)

                                                                                     tGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCACGCATGCAGCACCGTGGCGCGATTCTCg   >  1:5327387/1‑93 (MQ=255)

                                                                                      gATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGc  >  2:4607884/1‑93 (MQ=255)

GAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATCGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGC  >  NC_000913/3352321‑3352499

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 225 total aligned reads displayed.

TTCGGAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATCGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGCCGAT  >  NC_000913/3352317‑3352503

TTCGGAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATT                                                                                               >  SRR4302540.4990467/1‑94 (MQ=60)

 TCGGAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTG                                                                                              <  SRR4302540.7292426/94‑1 (MQ=60)

 TCGGAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTG                                                                                              >  SRR4302540.5427799/1‑94 (MQ=60)

  CGGAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGC                                                                                             <  SRR4302540.2518178/94‑1 (MQ=60)

   GGAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCC                                                                                            >  SRR4302540.6961017/1‑94 (MQ=60)

    GAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCC                                                                                           <  SRR4302540.3312820/94‑1 (MQ=60)

     AAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCACA                                                                                          >  SRR4302540.1682069/1‑94 (MQ=60)

      AGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCAC                                                                                         >  SRR4302540.4774947/1‑94 (MQ=60)

      AGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCAC                                                                                         >  SRR4302540.4682119/1‑94 (MQ=60)

       GTGGGGTTCCCGCTGAGCCTGGGGGAGGTTCACGATCTGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCCCA                                                                                        <  SRR4302540.9058200/94‑1 (MQ=60)

       GTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACA                                                                                        <  SRR4302540.9909645/94‑1 (MQ=60)

        TGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACAT                                                                                       >  SRR4302540.2258588/1‑94 (MQ=60)

        TGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACAT                                                                                       <  SRR4302540.9303245/94‑1 (MQ=60)

        TGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACAT                                                                                       <  SRR4302540.2395954/94‑1 (MQ=60)

        TGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACAT                                                                                       >  SRR4302540.4998782/1‑94 (MQ=60)

         GGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATA                                                                                      >  SRR4302540.3637324/1‑94 (MQ=60)

         GGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATA                                                                                      <  SRR4302540.6945092/94‑1 (MQ=60)

          GGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAA                                                                                     >  SRR4302540.2162931/1‑94 (MQ=60)

            GTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGTGAGGGATAACTGTGGTGTCGGCCTGATTGCCCACATAGAA                                                                                   >  SRR4302540.5538483/1‑94 (MQ=60)

            GTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAA                                                                                   <  SRR4302540.5530990/94‑1 (MQ=60)

            GTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAA                                                                                   >  SRR4302540.6977450/1‑94 (MQ=60)

            GTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAA                                                                                   >  SRR4302540.6957481/1‑94 (MQ=60)

               CCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGC                                                                                <  SRR4302540.3480063/94‑1 (MQ=60)

               CCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGC                                                                                <  SRR4302540.8656548/94‑1 (MQ=60)

               CCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGC                                                                                >  SRR4302540.10023118/1‑94 (MQ=60)

                 CGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGA                                                                              >  SRR4302540.4351554/1‑94 (MQ=60)

                  GCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAA                                                                             <  SRR4302540.825992/94‑1 (MQ=60)

                  GCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAA                                                                             >  SRR4302540.7889301/1‑94 (MQ=60)

                  GCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAA                                                                             <  SRR4302540.1028798/94‑1 (MQ=60)

                  GCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAA                                                                             <  SRR4302540.6696790/94‑1 (MQ=60)

                   CAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAAC                                                                            <  SRR4302540.2654069/94‑1 (MQ=60)

                    AGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACC                                                                           <  SRR4302540.3100175/94‑1 (MQ=60)

                    AGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACC                                                                           >  SRR4302540.3200854/1‑94 (MQ=60)

                    AGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACC                                                                           <  SRR4302540.10158558/94‑1 (MQ=60)

                      AGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTA                                                                         <  SRR4302540.6552695/94‑1 (MQ=60)

                      AGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCAAATAGAACGCGAACCTA                                                                         >  SRR4302540.5893234/1‑94 (MQ=60)

                       GCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAG                                                                        >  SRR4302540.4223198/1‑94 (MQ=60)

                       GCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAG                                                                        <  SRR4302540.8479956/94‑1 (MQ=60)

                       GCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGGGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAG                                                                        <  SRR4302540.8479957/94‑1 (MQ=60)

                        CCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGC                                                                       >  SRR4302540.2766535/1‑94 (MQ=60)

                         CTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCC                                                                      >  SRR4302540.109034/1‑94 (MQ=60)

                         CTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCC                                                                      <  SRR4302540.5930058/94‑1 (MQ=60)

                         CTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCC                                                                      >  SRR4302540.6033776/1‑94 (MQ=60)

                          TGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCA                                                                     >  SRR4302540.6524060/1‑94 (MQ=60)

                          TGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCA                                                                     >  SRR4302540.6524059/1‑94 (MQ=60)

                          TGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCA                                                                     >  SRR4302540.5883186/1‑94 (MQ=60)

                           GGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCAC                                                                    <  SRR4302540.4940022/94‑1 (MQ=60)

                            GGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACA                                                                   <  SRR4302540.4333838/94‑1 (MQ=60)

                            GGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACA                                                                   <  SRR4302540.4379982/94‑1 (MQ=60)

                            GGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACA                                                                   >  SRR4302540.7982696/1‑94 (MQ=60)

                             GGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAA                                                                  >  SRR4302540.3764468/1‑94 (MQ=60)

                             GGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAA                                                                  >  SRR4302540.5792648/1‑94 (MQ=60)

                             GGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAA                                                                  <  SRR4302540.4542304/94‑1 (MQ=60)

                              GGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAG                                                                 <  SRR4302540.3024409/94‑1 (MQ=60)

                              GGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAG                                                                 <  SRR4302540.3238540/94‑1 (MQ=60)

                              GGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAG                                                                 <  SRR4302540.6240508/94‑1 (MQ=60)

                               GAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGG                                                                >  SRR4302540.2158913/1‑94 (MQ=60)

                               GAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGG                                                                >  SRR4302540.3887568/1‑94 (MQ=60)

                               GAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGG                                                                <  SRR4302540.3693262/94‑1 (MQ=60)

                                AGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGT                                                               >  SRR4302540.398892/1‑94 (MQ=60)

                                AGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGT                                                               <  SRR4302540.6765259/94‑1 (MQ=60)

                                 GGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTA                                                              >  SRR4302540.9677702/1‑94 (MQ=60)

                                 GGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTA                                                              >  SRR4302540.7853842/1‑94 (MQ=60)

                                 GGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTA                                                              >  SRR4302540.5995023/1‑94 (MQ=60)

                                  GTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGACGGCGAACCTAGCCACCAGGTAG                                                             >  SRR4302540.6105190/1‑94 (MQ=60)

                                  GTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAG                                                             <  SRR4302540.3381535/94‑1 (MQ=60)

                                  GTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAG                                                             >  SRR4302540.9121476/1‑94 (MQ=60)

                                  GTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAG                                                             >  SRR4302540.6105189/1‑94 (MQ=60)

                                  GTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAG                                                             >  SRR4302540.2586200/1‑94 (MQ=60)

                                  GTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAG                                                             <  SRR4302540.2968969/94‑1 (MQ=60)

                                  GTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAG                                                             >  SRR4302540.2898971/1‑94 (MQ=60)

                                   tctatatttttttgtcCGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGT                                                            <  SRR4302540.5000814/78‑1 (MQ=60)

                                   TTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGT                                                            >  SRR4302540.10144912/1‑94 (MQ=60)

                                   TTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGT                                                            >  SRR4302540.5827935/1‑94 (MQ=60)

                                   TTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGT                                                            <  SRR4302540.8933187/94‑1 (MQ=60)

                                    TCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTG                                                           >  SRR4302540.6952619/1‑94 (MQ=60)

                                    TCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTG                                                           <  SRR4302540.6120062/94‑1 (MQ=60)

                                    TCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTG                                                           >  SRR4302540.6587702/1‑94 (MQ=60)

                                    TCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTG                                                           >  SRR4302540.5113903/1‑94 (MQ=60)

                                    TCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTG                                                           <  SRR4302540.336152/94‑1 (MQ=60)

                                     CACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGC                                                          >  SRR4302540.1548089/1‑94 (MQ=60)

                                     CACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTGTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTCGTGC                                                          >  SRR4302540.4338925/1‑94 (MQ=60)

                                      ACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCG                                                         >  SRR4302540.4177409/1‑94 (MQ=60)

                                      ACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCG                                                         <  SRR4302540.805585/94‑1 (MQ=60)

                                      ACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCG                                                         <  SRR4302540.2114082/94‑1 (MQ=60)

                                       CGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGGGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGT                                                        >  SRR4302540.3649262/1‑94 (MQ=60)

                                        GATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTA                                                       >  SRR4302540.9779903/1‑94 (MQ=60)

                                        GATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTA                                                       >  SRR4302540.1509767/1‑94 (MQ=60)

                                        GATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTA                                                       >  SRR4302540.9794993/1‑94 (MQ=60)

                                         ATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCGCAAGGTAGTGCGTAC                                                      <  SRR4302540.7578138/94‑1 (MQ=60)

                                         ATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAC                                                      <  SRR4302540.7924901/94‑1 (MQ=60)

                                         ATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAC                                                      <  SRR4302540.7713089/94‑1 (MQ=60)

                                         ATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAC                                                      >  SRR4302540.9913376/1‑94 (MQ=60)

                                         ATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAC                                                      <  SRR4302540.2803606/94‑1 (MQ=60)

                                         ATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAC                                                      <  SRR4302540.2601887/94‑1 (MQ=60)

                                          TATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACT                                                     >  SRR4302540.4151259/1‑94 (MQ=60)

                                           ATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTG                                                    >  SRR4302540.8723414/1‑94 (MQ=60)

                                           ATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTG                                                    >  SRR4302540.1861296/1‑94 (MQ=60)

                                           ATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTG                                                    >  SRR4302540.1649442/1‑94 (MQ=60)

                                            TGTTGTACGATAAAGCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATCGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGC                                                   <  SRR4302540.7159054/94‑1 (MQ=60)

                                             GTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCA                                                  <  SRR4302540.6711713/94‑1 (MQ=60)

                                             GTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCA                                                  >  SRR4302540.6484718/1‑94 (MQ=60)

                                             GTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCA                                                  <  SRR4302540.688201/94‑1 (MQ=60)

                                             GTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCA                                                  >  SRR4302540.7349198/1‑94 (MQ=60)

                                              TTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAA                                                 >  SRR4302540.6200546/1‑94 (MQ=60)

                                              TTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAA                                                 >  SRR4302540.505374/1‑94 (MQ=60)

                                               TGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAAT                                                <  SRR4302540.1800450/94‑1 (MQ=60)

                                               TGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAAT                                                >  SRR4302540.6179809/1‑94 (MQ=60)

                                               TGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAAT                                                >  SRR4302540.8698909/1‑94 (MQ=60)

                                               TGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAAT                                                >  SRR4302540.4473290/1‑94 (MQ=60)

                                               TGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAAT                                                >  SRR4302540.4473289/1‑94 (MQ=60)

                                                GTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATA                                               <  SRR4302540.8346473/94‑1 (MQ=60)

                                                GTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATA                                               >  SRR4302540.6620686/1‑94 (MQ=60)

                                                GTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATA                                               >  SRR4302540.6183233/1‑94 (MQ=60)

                                                 TACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATAC                                              <  SRR4302540.4260318/94‑1 (MQ=60)

                                                  ACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACA                                             >  SRR4302540.8964712/1‑94 (MQ=60)

                                                  ACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACA                                             <  SRR4302540.5151299/94‑1 (MQ=60)

                                                   CGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGCTTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACAC                                            <  SRR4302540.1749984/94‑1 (MQ=60)

                                                   CGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACAC                                            >  SRR4302540.2915907/1‑94 (MQ=60)

                                                    GATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACG                                           >  SRR4302540.7480126/1‑94 (MQ=60)

                                                     ATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGC                                          >  SRR4302540.2839480/1‑94 (MQ=60)

                                                      TAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCA                                         <  SRR4302540.9774444/94‑1 (MQ=60)

                                                      TAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCA                                         >  SRR4302540.4153940/1‑94 (MQ=60)

                                                       AAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCAC                                        <  SRR4302540.1758862/94‑1 (MQ=60)

                                                       AAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCAC                                        >  SRR4302540.2890936/1‑94 (MQ=60)

                                                       AAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAAACTAGCCACAAGGTAGTGCGTACTGCAATACACGCAC                                        <  SRR4302540.1758586/94‑1 (MQ=60)

                                                        AATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACT                                       <  SRR4302540.8253528/94‑1 (MQ=60)

                                                        AATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACT                                       <  SRR4302540.10024925/94‑1 (MQ=60)

                                                          TCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCaaaccagcccccaagcaaggggtactgcaataaaccgactggc                                     >  SRR4302540.2082622/1‑51 (MQ=60)

                                                          TCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGG                                     <  SRR4302540.6327881/94‑1 (MQ=60)

                                                          TCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGG                                     <  SRR4302540.4498233/94‑1 (MQ=60)

                                                           CCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGC                                    >  SRR4302540.8940327/1‑94 (MQ=60)

                                                             CTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCC                                  >  SRR4302540.7221965/1‑94 (MQ=60)

                                                             CTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCC                                  >  SRR4302540.7530874/1‑94 (MQ=60)

                                                             CTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCC                                  >  SRR4302540.6740425/1‑94 (MQ=60)

                                                             CTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCC                                  >  SRR4302540.3607772/1‑94 (MQ=60)

                                                              TTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCG                                 >  SRR4302540.10027123/1‑94 (MQ=60)

                                                               TGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGC                                <  SRR4302540.1116774/94‑1 (MQ=60)

                                                               TGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGC                                >  SRR4302540.7879546/1‑94 (MQ=60)

                                                                 AGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCAT                              <  SRR4302540.5880679/94‑1 (MQ=60)

                                                                  GAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATG                             <  SRR4302540.9342913/94‑1 (MQ=60)

                                                                  GAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATG                             <  SRR4302540.5997120/94‑1 (MQ=60)

                                                                  GAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATG                             >  SRR4302540.6082715/1‑94 (MQ=60)

                                                                  GAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATG                             >  SRR4302540.6082714/1‑94 (MQ=60)

                                                                   AGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGC                            <  SRR4302540.8082762/94‑1 (MQ=60)

                                                                   AGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGC                            >  SRR4302540.8553769/1‑94 (MQ=60)

                                                                    GGGATATCTGTGGTTTCGGCCTGATTGCCCACAGAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCA                           <  SRR4302540.8046744/94‑1 (MQ=60)

                                                                    GGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCA                           <  SRR4302540.1572975/94‑1 (MQ=60)

                                                                    GGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCA                           >  SRR4302540.7971655/1‑94 (MQ=60)

                                                                     GGATACCTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAG                          <  SRR4302540.3341521/94‑1 (MQ=60)

                                                                     GGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAG                          <  SRR4302540.3927916/94‑1 (MQ=60)

                                                                      GATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGC                         >  SRR4302540.5602564/1‑94 (MQ=60)

                                                                       ATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCA                        >  SRR4302540.1645928/1‑94 (MQ=60)

                                                                       ATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCA                        >  SRR4302540.669348/1‑94 (MQ=60)

                                                                       ATAACTGTGGTTTAGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCA                        >  SRR4302540.4049394/1‑94 (MQ=60)

                                                                        TAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCAC                       <  SRR4302540.9210421/94‑1 (MQ=60)

                                                                         AACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACC                      <  SRR4302540.1778555/94‑1 (MQ=60)

                                                                         AACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACC                      <  SRR4302540.3676005/94‑1 (MQ=60)

                                                                         AACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACC                      >  SRR4302540.4511678/1‑94 (MQ=60)

                                                                          ACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCG                     >  SRR4302540.4335418/1‑94 (MQ=60)

                                                                           CTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGT                    >  SRR4302540.5936133/1‑94 (MQ=60)

                                                                           CTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGT                    <  SRR4302540.8093992/94‑1 (MQ=60)

                                                                           ATGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACATAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGT                    <  SRR4302540.371436/94‑1 (MQ=60)

                                                                            TGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTG                   >  SRR4302540.6859085/1‑94 (MQ=60)

                                                                              TGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGC                 <  SRR4302540.554649/94‑1 (MQ=60)

                                                                              TGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGC                 <  SRR4302540.8844154/94‑1 (MQ=60)

                                                                              TGGTTGCGGCCTGATTGCCCACAGAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGC                 <  SRR4302540.4512622/94‑1 (MQ=60)

                                                                               GGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCG                <  SRR4302540.1945194/94‑1 (MQ=60)

                                                                               GGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCG                <  SRR4302540.3042957/94‑1 (MQ=60)

                                                                                GTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGC               >  SRR4302540.8789882/1‑94 (MQ=60)

                                                                                  TTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGA             >  SRR4302540.2195839/1‑94 (MQ=60)

                                                                                   TCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGAT            >  SRR4302540.3461997/1‑94 (MQ=60)

                                                                                   TCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGAT            >  SRR4302540.9270138/1‑94 (MQ=60)

                                                                                   TCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCAAT            >  SRR4302540.5594998/1‑94 (MQ=60)

                                                                                    CGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATT           >  SRR4302540.1696588/1‑94 (MQ=60)

                                                                                    CGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATT           <  SRR4302540.9899295/94‑1 (MQ=60)

                                                                                    CGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATT           >  SRR4302540.8525474/1‑94 (MQ=60)

                                                                                    CGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATT           >  SRR4302540.3348307/1‑94 (MQ=60)

                                                                                    CGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATT           >  SRR4302540.1696579/1‑94 (MQ=60)

                                                                                     GGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTC          >  SRR4302540.7655861/1‑94 (MQ=60)

                                                                                     GGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTC          >  SRR4302540.7970438/1‑94 (MQ=60)

                                                                                      GCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCT         >  SRR4302540.8426370/1‑94 (MQ=60)

                                                                                       CCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTC        <  SRR4302540.4088877/94‑1 (MQ=60)

                                                                                       CCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTC        >  SRR4302540.6488236/1‑94 (MQ=60)

                                                                                       CCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTC        <  SRR4302540.3189268/94‑1 (MQ=60)

                                                                                        CTGATTGCCCACATAGAAGGCGACCCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCG       <  SRR4302540.3856775/94‑1 (MQ=60)

                                                                                        CTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCG       <  SRR4302540.1803548/94‑1 (MQ=60)

                                                                                        CTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCG       <  SRR4302540.6416897/94‑1 (MQ=60)

                                                                                        CTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCG       >  SRR4302540.2251780/1‑94 (MQ=60)

                                                                                        CTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCACGCATGCAGCACCGTGGCGCGATTCTCG       >  SRR4302540.5385744/1‑94 (MQ=60)

                                                                                        CTGATTACCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCG       >  SRR4302540.6296236/1‑94 (MQ=60)

                                                                                         TGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGC      >  SRR4302540.9804957/1‑94 (MQ=60)

                                                                                         TGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGC      <  SRR4302540.7951359/94‑1 (MQ=60)

                                                                                           ATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGCCG    >  SRR4302540.2169363/1‑94 (MQ=60)

                                                                                           ATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGCCG    >  SRR4302540.5468729/1‑94 (MQ=60)

                                                                                            TTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGCCGA   >  SRR4302540.9271827/1‑94 (MQ=60)

                                                                                             TGCCCACATAGAAGGCGAACCTCGCCACAAGGTAGTGCGTACTGCAATACACGAACTGGCCCGCATGCAGCCCCGTGGCGCGATTCTCGCCGAT  <  SRR4302540.5949762/94‑1 (MQ=60)

                                                                                             TGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGCCGAT  <  SRR4302540.2609794/94‑1 (MQ=60)

                                                                                             TGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGCCGAT  >  SRR4302540.6107740/1‑94 (MQ=60)

                                                                                             TGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGCCGAT  >  SRR4302540.9363229/1‑94 (MQ=60)

TTCGGAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATCGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGCCGAT  >  NC_000913/3352317‑3352503

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 10 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`