Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,352,410 |
C→T |
I48I (ATC→ATT) |
gltB → |
glutamate synthase large subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,352,410 | 0 | C | T | 100.0%
| 919.5
/ NA
| 245 | I48I (ATC→ATT) | gltB | glutamate synthase large subunit |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (135/110); total (135/110) |
Only 100 of 247 total aligned reads displayed.
GGAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATCGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGC > NC_000913/3352320‑3352499
|
ggAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGc > 1:1031122/1‑93 (MQ=255)
ggAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGc > 2:2465005/1‑93 (MQ=255)
aaGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGccc < 1:5244489/93‑1 (MQ=255)
aaGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGccc < 1:4787157/93‑1 (MQ=255)
tGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCcaca > 1:1663486/1‑93 (MQ=255)
ggggTTCCCGCGGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACAt > 2:680038/1‑93 (MQ=255)
ggTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAg < 1:121790/93‑1 (MQ=255)
ggTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAg > 2:322170/1‑93 (MQ=255)
gTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGa > 2:2640583/1‑93 (MQ=255)
ttCCCGCAGAGCCTGGGTGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGaa < 1:2295872/93‑1 (MQ=255)
tcacGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAg < 1:5310326/90‑1 (MQ=255)
cccGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAgg < 1:3754740/93‑1 (MQ=255)
ccGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGc > 1:3856049/1‑93 (MQ=255)
cAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGaa > 2:5795316/1‑93 (MQ=255)
cAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGaa < 2:143452/93‑1 (MQ=255)
agagCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAAc > 1:1608618/1‑93 (MQ=255)
agCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCt < 1:4223152/93‑1 (MQ=255)
ccTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAg > 1:5480017/1‑93 (MQ=255)
cTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGc > 2:634420/1‑93 (MQ=255)
tGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGcc > 1:1150234/1‑93 (MQ=255)
gggggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCca > 1:3658114/1‑93 (MQ=255)
gggggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCca > 1:2528888/1‑93 (MQ=255)
ggggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCcac < 2:1012581/93‑1 (MQ=255)
ggggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCcac < 1:2392792/93‑1 (MQ=255)
gggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCcaca > 1:1986250/1‑93 (MQ=255)
ggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACaa < 2:923/93‑1 (MQ=255)
ggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACaa > 1:2095833/1‑93 (MQ=255)
gAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAg > 1:4644371/1‑93 (MQ=255)
gAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAg < 2:1375405/93‑1 (MQ=255)
aGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAgg < 2:88714/93‑1 (MQ=255)
ggTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGt < 1:4270634/93‑1 (MQ=255)
gTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTa < 2:5502969/93‑1 (MQ=255)
gTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTa < 1:985503/93‑1 (MQ=255)
gTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTa < 1:1803149/93‑1 (MQ=255)
tCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGt < 2:5255691/93‑1 (MQ=255)
cACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTg > 2:4468337/1‑93 (MQ=255)
gATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGt > 1:5697818/1‑93 (MQ=255)
tatGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAc > 2:5397566/1‑93 (MQ=255)
tatGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAc > 2:4316656/1‑93 (MQ=255)
tatGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAc > 2:3163125/1‑93 (MQ=255)
tatGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAACGCAGTGCGTAc > 2:6205265/1‑93 (MQ=255)
atGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACt > 1:3699548/1‑93 (MQ=255)
atGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACt > 2:4046695/1‑93 (MQ=255)
tgtACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCaa < 1:3394094/93‑1 (MQ=255)
gtACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAAt > 2:5062575/1‑93 (MQ=255)
aCGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATac > 1:2224061/1‑93 (MQ=255)
cGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATaca < 2:1799048/93‑1 (MQ=255)
cGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATaca > 2:128797/1‑93 (MQ=255)
gATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATacac > 1:5004268/1‑93 (MQ=255)
aTAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACg > 2:3113137/1‑93 (MQ=255)
aTAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACg < 2:4069116/93‑1 (MQ=255)
aTAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACg > 2:794348/1‑93 (MQ=255)
aTAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACg > 2:361940/1‑93 (MQ=255)
aaTCCCTTGAGAGGGATAACTGTGGTTTCGGCTTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCAc < 1:585379/93‑1 (MQ=255)
aaTCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCAc < 1:767919/93‑1 (MQ=255)
aTCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACt > 1:3082033/1‑93 (MQ=255)
aTCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACt > 2:2408733/1‑93 (MQ=255)
aTCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACt < 2:2153382/93‑1 (MQ=255)
tCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTg < 2:2708706/93‑1 (MQ=255)
tCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTg > 2:5596322/1‑93 (MQ=255)
ccTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGc < 2:3849294/93‑1 (MQ=255)
ccTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGc < 1:3580931/93‑1 (MQ=255)
ccTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGc < 2:3362915/93‑1 (MQ=255)
cTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGcc < 1:4840590/93‑1 (MQ=255)
gagaGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGc < 2:2218878/93‑1 (MQ=255)
agagGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCa < 1:3035367/93‑1 (MQ=255)
agagGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAAGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCa > 2:5909288/1‑93 (MQ=255)
gagGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCAt > 2:4979802/1‑93 (MQ=255)
gagGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCAt > 1:4650524/1‑93 (MQ=255)
agGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTACTGCGTACTGCAATACAAGCAGTTGCCCGCAtc > 1:1385201/1‑92 (MQ=255)
gggATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATgc > 2:293364/1‑93 (MQ=255)
ggATAACTGTGGTTTTGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATgca > 2:3894788/1‑93 (MQ=255)
aTAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATgcagc > 1:3278676/1‑93 (MQ=255)
tAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATgcagca > 1:49556/1‑93 (MQ=255)
aCTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCAcc > 1:6160406/1‑93 (MQ=255)
cTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCg > 1:5382477/1‑93 (MQ=255)
cTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCg > 1:676522/1‑93 (MQ=255)
cTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCg > 2:1922782/1‑93 (MQ=255)
tgtgGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGt < 2:741694/93‑1 (MQ=255)
tgtgGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGt < 1:4445298/93‑1 (MQ=255)
gtgGTTTCGGCCTGATTGCCCACATAGCAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTg > 2:2780426/1‑93 (MQ=255)
gtgGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCCTg > 2:3530961/1‑93 (MQ=255)
tgGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTgg > 2:1205617/1‑93 (MQ=255)
tttCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGgcgc < 1:4057267/93‑1 (MQ=255)
tttCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCACGCAGCACCGTGgcgc > 1:5141047/1‑93 (MQ=255)
tCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGa > 2:4796622/1‑93 (MQ=255)
cGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGAt < 1:145025/93‑1 (MQ=255)
ggCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGAtt < 2:6059438/93‑1 (MQ=255)
gCCTGATTGCCCACATAGAAGGCGAACCTAGCCACCAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATtc > 2:3253891/1‑93 (MQ=255)
gCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATtc > 1:6083027/1‑93 (MQ=255)
gCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATtc > 1:5968947/1‑93 (MQ=255)
ccTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATtct > 2:6226913/1‑93 (MQ=255)
ccTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATtct > 1:5407292/1‑93 (MQ=255)
cTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATtctc > 2:4823850/1‑93 (MQ=255)
tGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCg > 2:2731970/1‑93 (MQ=255)
tGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCg > 2:5627981/1‑93 (MQ=255)
tGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCg > 2:1312704/1‑93 (MQ=255)
tGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCg > 2:67510/1‑93 (MQ=255)
gATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGc > 1:2751122/1‑93 (MQ=255)
gATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGc > 2:2825767/1‑93 (MQ=255)
|
GGAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATCGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGC > NC_000913/3352320‑3352499
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTCGGAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATCGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGCCGAT > NC_000913/3352317‑3352503
|
TTCGGAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATT < SRR4302533.2948770/94‑1 (MQ=60)
TCGGAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTG < SRR4302533.55406/94‑1 (MQ=60)
CGGAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGC > SRR4302533.1037187/1‑94 (MQ=60)
GGAAGTGGGGTGCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAAGCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCC < SRR4302533.2278088/94‑1 (MQ=60)
AAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCA < SRR4302533.4816149/94‑1 (MQ=60)
AAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCA < SRR4302533.5276011/94‑1 (MQ=60)
AGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCAC > SRR4302533.4293042/1‑94 (MQ=60)
GTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACA > SRR4302533.1673541/1‑94 (MQ=60)
TGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACAT < SRR4302533.2239151/94‑1 (MQ=60)
TGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACAT < SRR4302533.4833331/94‑1 (MQ=60)
GGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGA < SRR4302533.122557/94‑1 (MQ=60)
TTCCCGCAGAGCCTGGGTGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAG < SRR4302533.2310089/94‑1 (MQ=60)
TTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAG < SRR4302533.3794556/94‑1 (MQ=60)
TCACGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGG < SRR4302533.5342151/94‑1 (MQ=60)
CCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGC > SRR4302533.3879594/1‑94 (MQ=60)
CCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGC < SRR4302533.4475156/94‑1 (MQ=60)
CCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGC < SRR4302533.3777753/94‑1 (MQ=60)
CCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGGCTGATTGCCCACATAGAAGGCG > SRR4302533.5437904/1‑94 (MQ=60)
CCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCG < SRR4302533.5277909/94‑1 (MQ=60)
CCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCG > SRR4302533.3967552/1‑94 (MQ=60)
GCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAA < SRR4302533.6013386/94‑1 (MQ=60)
CAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAAC > SRR4302533.1618377/1‑94 (MQ=60)
GAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCT < SRR4302533.2382723/94‑1 (MQ=60)
AGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTA < SRR4302533.4248685/94‑1 (MQ=60)
GCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAG > SRR4302533.5513055/1‑94 (MQ=60)
CCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGC < SRR4302533.1736722/94‑1 (MQ=60)
CTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCC > SRR4302533.208249/1‑94 (MQ=60)
CTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCC > SRR4302533.1157103/1‑94 (MQ=60)
TGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCA > SRR4302533.3680607/1‑94 (MQ=60)
TGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCA > SRR4302533.2544458/1‑94 (MQ=60)
GGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACA < SRR4302533.2407562/94‑1 (MQ=60)
GGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACA > SRR4302533.1998402/1‑94 (MQ=60)
GGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAA > SRR4302533.2108738/1‑94 (MQ=60)
GGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAG > SRR4302533.4672508/1‑94 (MQ=60)
AGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGT < SRR4302533.861379/94‑1 (MQ=60)
AGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGT < SRR4302533.4566443/94‑1 (MQ=60)
GGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTTGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTA < SRR4302533.6120338/94‑1 (MQ=60)
GGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTA < SRR4302533.4296340/94‑1 (MQ=60)
GGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTA < SRR4302533.144234/94‑1 (MQ=60)
GTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAG < SRR4302533.991273/94‑1 (MQ=60)
GTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAG < SRR4302533.3090653/94‑1 (MQ=60)
GTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAG < SRR4302533.1814126/94‑1 (MQ=60)
GTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAG < SRR4302533.3027026/94‑1 (MQ=60)
TTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGT > SRR4302533.3678784/1‑94 (MQ=60)
TCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTG < SRR4302533.1571806/94‑1 (MQ=60)
CGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGT > SRR4302533.1239857/1‑94 (MQ=60)
CGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGT > SRR4302533.2662123/1‑94 (MQ=60)
CGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGT > SRR4302533.5732236/1‑94 (MQ=60)
ATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAC < SRR4302533.6023819/94‑1 (MQ=60)
ATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAC > SRR4302533.3763955/1‑94 (MQ=60)
TATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACT > SRR4302533.33263/1‑94 (MQ=60)
TATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACT < SRR4302533.206795/94‑1 (MQ=60)
TATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACT < SRR4302533.3690930/94‑1 (MQ=60)
TATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACT > SRR4302533.3722269/1‑94 (MQ=60)
ATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTG > SRR4302533.4698315/1‑94 (MQ=60)
GTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCA < SRR4302533.5174324/94‑1 (MQ=60)
GTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCA > SRR4302533.1819660/1‑94 (MQ=60)
TTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAT > SRR4302533.5954002/1‑94 (MQ=60)
TGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAAT > SRR4302533.1133259/1‑94 (MQ=60)
TGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAAT > SRR4302533.3161031/1‑94 (MQ=60)
TGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAAT < SRR4302533.3415055/94‑1 (MQ=60)
GTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATA < SRR4302533.3618809/94‑1 (MQ=60)
TACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATAC > SRR4302533.2237795/1‑94 (MQ=60)
TACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATAC < SRR4302533.3004953/94‑1 (MQ=60)
ACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACA > SRR4302533.336089/1‑94 (MQ=60)
CGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACAC > SRR4302533.5034596/1‑94 (MQ=60)
GATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACG > SRR4302533.5347685/1‑94 (MQ=60)
GATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACG < SRR4302533.3518099/94‑1 (MQ=60)
AATCCCTTGAGAGGGATAACTGTGGTTTCGGCTTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACT < SRR4302533.588830/94‑1 (MQ=60)
AATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACT < SRR4302533.772448/94‑1 (MQ=60)
AATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACT > SRR4302533.3100940/1‑94 (MQ=60)
ATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTG > SRR4302533.5373941/1‑94 (MQ=60)
ATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTG < SRR4302533.4880435/94‑1 (MQ=60)
CCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGC < SRR4302533.3889161/94‑1 (MQ=60)
CCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGC > SRR4302533.16391/1‑94 (MQ=60)
CCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCAAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGC > SRR4302533.4090515/1‑94 (MQ=60)
CCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCC < SRR4302533.3602993/94‑1 (MQ=60)
CTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCC < SRR4302533.4869929/94‑1 (MQ=60)
CTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCC < SRR4302533.1540732/94‑1 (MQ=60)
TTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCG < SRR4302533.489362/94‑1 (MQ=60)
TGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGC < SRR4302533.5818462/94‑1 (MQ=60)
AGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCAT > SRR4302533.4678700/1‑94 (MQ=60)
AGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCAT > SRR4302533.6249706/1‑94 (MQ=60)
AGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCAT < SRR4302533.3053943/94‑1 (MQ=60)
AGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCAT > SRR4302533.741024/1‑94 (MQ=60)
GAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATG > SRR4302533.1321197/1‑94 (MQ=60)
GAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTACTGCGTACTGCAATACAAGCAGTTGCCCGCATC > SRR4302533.1393536/1‑94 (MQ=60)
GGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAG > SRR4302533.4316567/1‑94 (MQ=60)
GATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGC > SRR4302533.3298920/1‑94 (MQ=60)
ATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCA > SRR4302533.5762008/1‑94 (MQ=60)
ATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCA < SRR4302533.5068088/94‑1 (MQ=60)
ATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCA > SRR4302533.49898/1‑94 (MQ=60)
AACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACC > SRR4302533.6197454/1‑94 (MQ=60)
AACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTACTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACC > SRR4302533.973302/1‑94 (MQ=60)
ACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCG > SRR4302533.5414815/1‑94 (MQ=60)
ACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCG > SRR4302533.680520/1‑94 (MQ=60)
CTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGT < SRR4302533.467556/94‑1 (MQ=60)
TGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTG < SRR4302533.3757226/94‑1 (MQ=60)
TGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTG < SRR4302533.5458665/94‑1 (MQ=60)
TGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTG > SRR4302533.6255191/1‑94 (MQ=60)
TGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTG < SRR4302533.2533783/94‑1 (MQ=60)
TGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTG < SRR4302533.4472186/94‑1 (MQ=60)
GTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGG < SRR4302533.5722384/94‑1 (MQ=60)
GGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCG < SRR4302533.5004192/94‑1 (MQ=60)
GTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCACGCAGCACCGTGGCGC > SRR4302533.5172117/1‑94 (MQ=60)
TTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCG < SRR4302533.4081965/94‑1 (MQ=60)
TTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGA > SRR4302533.54874/1‑94 (MQ=60)
TCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGAT < SRR4302533.5188125/94‑1 (MQ=60)
CGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATT < SRR4302533.145955/94‑1 (MQ=60)
GGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTC > SRR4302533.6005082/1‑94 (MQ=60)
GGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTC > SRR4302533.1705730/1‑94 (MQ=60)
GGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTC > SRR4302533.6119808/1‑94 (MQ=60)
GGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTC > SRR4302533.2215878/1‑94 (MQ=60)
GGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTC > SRR4302533.4273078/1‑94 (MQ=60)
GCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCT > SRR4302533.5439786/1‑94 (MQ=60)
CCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTC > SRR4302533.1201515/1‑94 (MQ=60)
CTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCG > SRR4302533.2448251/1‑94 (MQ=60)
TGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGC > SRR4302533.2767990/1‑94 (MQ=60)
TGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGC > SRR4302533.4790204/1‑94 (MQ=60)
TGCCCACATAGAAGGCGACCCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGCCGAT < SRR4302533.5884301/94‑1 (MQ=60)
TGCCCACAGAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGCCGAT < SRR4302533.5675119/94‑1 (MQ=60)
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TTCGGAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATCGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGCCGAT > NC_000913/3352317‑3352503
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
