Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,359,299	T→C	G163G (GGT→GGC)	gltF →	GltF

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,359,299	0	T	C	99.8%	1534.8 / NA	477	G163G (GGT→GGC)	gltF	GltF
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (242/232); total (244/233)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 490 total aligned reads displayed.

AGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCT  >  NC_000913/3359209‑3359388

aGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGa                                                                                         >  2:6116710/1‑93 (MQ=255)

aGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGa                                                                                         >  1:8143955/1‑93 (MQ=255)

 ggTTCCGCGCCTAATGGACAAAAAATTGGTGCTGCATCCATTGGTATAGACAGGTCTAAAGGTGGGATTCACGCGGCGGACGATACAGGCGaa                                                                                        >  1:8965899/1‑93 (MQ=255)

  gTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGaaa                                                                                       <  2:8883005/93‑1 (MQ=255)

  gTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGaaa                                                                                       <  2:7768378/93‑1 (MQ=255)

  gTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGaaa                                                                                       <  2:7713369/93‑1 (MQ=255)

  gTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGaaa                                                                                       <  2:5480641/93‑1 (MQ=255)

  gTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGaaa                                                                                       <  2:2469516/93‑1 (MQ=255)

   ttCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAAt                                                                                      >  1:1067830/1‑93 (MQ=255)

    tCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAAtt                                                                                     >  2:5005355/1‑93 (MQ=255)

     cTGCGCCTAATGGGCAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTc                                                                                    <  1:9340165/93‑1 (MQ=255)

      tGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTcc                                                                                   >  1:9270986/1‑93 (MQ=255)

      tGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTcc                                                                                   <  1:5754052/93‑1 (MQ=255)

        cgcCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTg                                                                                 >  1:9520640/1‑93 (MQ=255)

         gcCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGt                                                                                <  1:2132603/93‑1 (MQ=255)

            tAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGa                                                                             >  2:9807874/1‑93 (MQ=255)

             aaTGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGAc                                                                            <  2:2172650/93‑1 (MQ=255)

             aaTGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGAc                                                                            >  1:7709719/1‑93 (MQ=255)

             aaTGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGAc                                                                            <  1:4155769/93‑1 (MQ=255)

              aTGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGAcc                                                                           >  1:6153277/1‑93 (MQ=255)

               tGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCt                                                                          >  2:7139138/1‑93 (MQ=255)

                    aaaaaaTTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTACTGTCGACCTGATTc                                                                     >  1:7501968/1‑93 (MQ=255)

                     aaaaaTTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCa                                                                    >  2:6276926/1‑93 (MQ=255)

                      aaaaTTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCaa                                                                   >  1:8624971/1‑93 (MQ=255)

                       aaaTTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCaaa                                                                  >  1:5677042/1‑93 (MQ=255)

                           tGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGa                                                              <  2:2838712/93‑1 (MQ=255)

                           tGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGa                                                              <  2:6891865/93‑1 (MQ=255)

                            ggCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGAc                                                             <  1:1812573/93‑1 (MQ=255)

                            ggCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGAc                                                             <  2:3461039/93‑1 (MQ=255)

                            ggCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGAc                                                             <  1:4384939/93‑1 (MQ=255)

                             gcgcTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGAcc                                                            <  1:91436/93‑1 (MQ=255)

                             gcgcTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGAcc                                                            >  1:8739491/1‑93 (MQ=255)

                              cgcTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCa                                                           <  1:4840403/93‑1 (MQ=255)

                               gcTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCAc                                                          >  1:5179651/1‑93 (MQ=255)

                               gcTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCAc                                                          <  2:3974068/93‑1 (MQ=255)

                                cTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACt                                                         <  2:1193368/93‑1 (MQ=255)

                                cTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACt                                                         <  1:2734885/93‑1 (MQ=255)

                                   cATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGt                                                      <  1:3142102/93‑1 (MQ=255)

                                    aTCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTc                                                     >  1:100809/1‑93 (MQ=255)

                                     tCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGt                                                                                >  1:7940983/1‑65 (MQ=255)

                                     tCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTca                                                    <  2:1367108/93‑1 (MQ=255)

                                     tCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTca                                                    <  1:3912175/93‑1 (MQ=255)

                                       cATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTcagc                                                  <  2:2514487/93‑1 (MQ=255)

                                        aTTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTcagca                                                 <  1:2932563/93‑1 (MQ=255)

                                        aTTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTcagca                                                 >  2:7888007/1‑93 (MQ=255)

                                          tGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCagcagc                                               >  1:6332214/1‑93 (MQ=255)

                                            gTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGa                                             >  2:8227856/1‑93 (MQ=255)

                                            gTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGa                                             >  1:1206192/1‑93 (MQ=255)

                                            gTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGa                                             >  2:846307/1‑93 (MQ=255)

                                            gTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCAACCTGATTCAAACTGACCACTGGGGAGCAGCGa                                             >  2:3808535/1‑93 (MQ=255)

                                             tATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAc                                            >  2:6595184/1‑93 (MQ=255)

                                             tATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAc                                            <  2:1972502/93‑1 (MQ=255)

                                             tATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAc                                            <  2:4152970/93‑1 (MQ=255)

                                              aTTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAcc                                           >  1:8263691/1‑93 (MQ=255)

                                               ttGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACGACTGGTCAGCAGCGAccc                                          >  1:6783472/1‑93 (MQ=255)

                                               ttGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAccc                                          <  1:8820138/93‑1 (MQ=255)

                                               ttGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAccc                                          >  2:9216678/1‑93 (MQ=255)

                                                 gACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAccccc                                        >  1:4965408/1‑93 (MQ=255)

                                                  aCAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAcccccc                                       >  2:7354396/1‑92 (MQ=255)

                                                  aCAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCca                                       >  2:1693508/1‑93 (MQ=255)

                                                    aGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCcaca                                     <  1:7323575/93‑1 (MQ=255)

                                                    aGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCcaca                                     >  1:5517091/1‑93 (MQ=255)

                                                    aGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCcaca                                     <  2:4638795/93‑1 (MQ=255)

                                                     ggTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACAt                                    <  1:650685/93‑1 (MQ=255)

                                                     ggTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACAt                                    >  2:6398358/1‑93 (MQ=255)

                                                         tAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGaa                                <  1:3312494/93‑1 (MQ=255)

                                                         tAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGaa                                <  1:4584228/93‑1 (MQ=255)

                                                            tggtggGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGc                             >  1:402740/1‑93 (MQ=255)

                                                            tggtggGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTAGTCAGCAGCGACCCCCACATGGAAAGc                             >  1:2391427/1‑93 (MQ=255)

                                                              gtggGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCt                           >  2:7602592/1‑93 (MQ=255)

                                                              gtggGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCt                           >  2:6818592/1‑93 (MQ=255)

                                                                gggATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCa                         <  2:94519/93‑1 (MQ=255)

                                                                  gATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATc                       <  1:6991426/93‑1 (MQ=255)

                                                                  gATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATc                       <  1:1437144/93‑1 (MQ=255)

                                                                   aTTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCt                      <  2:3148915/93‑1 (MQ=255)

                                                                    ttCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTa                     >  1:6204992/1‑93 (MQ=255)

                                                                     tCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTaa                    <  2:534573/93‑1 (MQ=255)

                                                                     tCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTaa                    >  2:580839/1‑93 (MQ=255)

                                                                      cACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAt                   <  2:4851489/93‑1 (MQ=255)

                                                                       aCGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATg                  >  1:7628522/1‑93 (MQ=255)

                                                                       aCGCGGCGAACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATg                  <  1:9885983/93‑1 (MQ=255)

                                                                        cgcgGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATgg                 >  2:1847843/1‑93 (MQ=255)

                                                                        cgcgGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCAACATGGAAAGCCTCATCTAATgg                 >  1:3551420/1‑93 (MQ=255)

                                                                         gcggctGACGATACAGGCGAAAGTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGgc                <  2:5641752/93‑1 (MQ=255)

                                                                             cggACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCATTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCAt            <  2:6002098/93‑1 (MQ=255)

                                                                             cggACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCAt            <  2:5192500/93‑1 (MQ=255)

                                                                              ggACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCAtc           >  1:5943288/1‑92 (MQ=255)

                                                                               gACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTc          <  1:2572660/93‑1 (MQ=255)

                                                                               gACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTc          >  1:4310115/1‑93 (MQ=255)

                                                                               gACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTc          <  2:4364247/93‑1 (MQ=255)

                                                                               gACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTc          >  2:9363989/1‑93 (MQ=255)

                                                                               gACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTc          <  2:2690139/93‑1 (MQ=255)

                                                                                aCGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCt         <  1:3793219/93‑1 (MQ=255)

                                                                                   aTACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCt      <  2:4471946/93‑1 (MQ=255)

                                                                                   aTACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCt      >  1:1470545/1‑93 (MQ=255)

                                                                                   aTACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCt      <  1:3819922/93‑1 (MQ=255)

                                                                                    tACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTc     >  1:8477158/1‑93 (MQ=255)

                                                                                    tACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTc     <  2:230189/93‑1 (MQ=255)

                                                                                     aCAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCg    >  1:9934850/1‑93 (MQ=255)

                                                                                       aGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCt  >  1:4673512/1‑93 (MQ=255)

AGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCT  >  NC_000913/3359209‑3359388

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 277 total aligned reads displayed.

TTTAGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCTGACA  >  NC_000913/3359206‑3359392

TTTAGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGC                                                                                               <  SRR4302540.4473753/94‑1 (MQ=60)

GTTAGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGC                                                                                               <  SRR4302540.2219122/94‑1 (MQ=60)

 TTAGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCG                                                                                              >  SRR4302540.666953/1‑94 (MQ=60)

 TTAGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCG                                                                                              >  SRR4302540.697851/1‑94 (MQ=60)

  TAGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGA                                                                                             >  SRR4302540.8238486/1‑94 (MQ=60)

  TAGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGA                                                                                             >  SRR4302540.9251286/1‑94 (MQ=60)

   AGGTTCTGCTCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAA                                                                                            >  SRR4302540.7774972/1‑94 (MQ=60)

   AGGTTCTGCTCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAA                                                                                            >  SRR4302540.7774971/1‑94 (MQ=60)

    GGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAA                                                                                           <  SRR4302540.1127334/94‑1 (MQ=60)

     GTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAAT                                                                                          <  SRR4302540.9568856/94‑1 (MQ=60)

     GTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAAT                                                                                          >  SRR4302540.3770465/1‑94 (MQ=60)

      TTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATT                                                                                         <  SRR4302540.5996992/94‑1 (MQ=60)

       TCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTC                                                                                        <  SRR4302540.4404449/94‑1 (MQ=60)

        CTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCC                                                                                       >  SRR4302540.9381846/1‑94 (MQ=60)

         TGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCT                                                                                      <  SRR4302540.5817565/94‑1 (MQ=60)

         TCCGCCTAATGGGCAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCT                                                                                      <  SRR4302540.10047438/94‑1 (MQ=60)

          GCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTG                                                                                     >  SRR4302540.9633386/1‑94 (MQ=60)

           CGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGT                                                                                    >  SRR4302540.5578201/1‑94 (MQ=60)

           CGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGT                                                                                    >  SRR4302540.8973436/1‑94 (MQ=60)

            GCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTC                                                                                   <  SRR4302540.4069450/94‑1 (MQ=60)

            GCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTC                                                                                   <  SRR4302540.2155495/94‑1 (MQ=60)

             CCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCG                                                                                  >  SRR4302540.4101110/1‑94 (MQ=60)

              CTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGA                                                                                 >  SRR4302540.315694/1‑94 (MQ=60)

              CTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGA                                                                                 >  SRR4302540.2687855/1‑94 (MQ=60)

               TAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCTTGTCGAC                                                                                >  SRR4302540.3840687/1‑94 (MQ=60)

               TAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGAC                                                                                >  SRR4302540.8177678/1‑94 (MQ=60)

               TAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGAC                                                                                >  SRR4302540.6419099/1‑94 (MQ=60)

               TAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGAC                                                                                >  SRR4302540.7798279/1‑94 (MQ=60)

               TAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGAC                                                                                >  SRR4302540.3840688/1‑94 (MQ=60)

               TAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGAC                                                                                >  SRR4302540.6419098/1‑94 (MQ=60)

                AATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACC                                                                               <  SRR4302540.1998658/94‑1 (MQ=60)

                AATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACC                                                                               <  SRR4302540.1998657/94‑1 (MQ=60)

                AATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACC                                                                               >  SRR4302540.3220166/1‑94 (MQ=60)

                AATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACC                                                                               >  SRR4302540.6221818/1‑94 (MQ=60)

                AATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACC                                                                               <  SRR4302540.4200791/94‑1 (MQ=60)

                 ATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCT                                                                              >  SRR4302540.6224976/1‑94 (MQ=60)

                 ATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCT                                                                              >  SRR4302540.7185107/1‑94 (MQ=60)

                 ATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCT                                                                              <  SRR4302540.4009798/94‑1 (MQ=60)

                  agaACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTG                                                                             <  SRR4302540.2130648/91‑1 (MQ=60)

                  TGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTG                                                                             >  SRR4302540.5577030/1‑94 (MQ=60)

                    GACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGAT                                                                           >  SRR4302540.519249/1‑94 (MQ=60)

                     ACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATT                                                                          <  SRR4302540.5238943/94‑1 (MQ=60)

                     ACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATT                                                                          >  SRR4302540.2900005/1‑94 (MQ=60)

                     ACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATT                                                                          <  SRR4302540.9450741/94‑1 (MQ=60)

                     ACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATT                                                                          <  SRR4302540.7064382/94‑1 (MQ=60)

                      CAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTC                                                                         >  SRR4302540.2353319/1‑94 (MQ=60)

                       AAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCA                                                                        <  SRR4302540.6341850/94‑1 (MQ=60)

                        AAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAA                                                                       >  SRR4302540.8725162/1‑94 (MQ=60)

                         AAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGCTTCAAA                                                                      >  SRR4302540.2662760/1‑94 (MQ=60)

                         AAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAA                                                                      >  SRR4302540.5739552/1‑94 (MQ=60)

                         AAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAA                                                                      <  SRR4302540.1485934/94‑1 (MQ=60)

                         AAAAGTGGCGCTGCATCCATTGGAATTGACAGGTCTAATGGTGGAATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAA                                                                      <  SRR4302540.9372312/94‑1 (MQ=60)

                          AAATTGGCGCTGCATCCATTGGTATTGACAGTTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAAC                                                                     <  SRR4302540.432835/94‑1 (MQ=60)

                           AATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACT                                                                    <  SRR4302540.3838948/94‑1 (MQ=60)

                           AATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACT                                                                    <  SRR4302540.3994320/94‑1 (MQ=60)

                            ATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTG                                                                   >  SRR4302540.4853333/1‑94 (MQ=60)

                            ATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTG                                                                   <  SRR4302540.4978761/94‑1 (MQ=60)

                            ATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTG                                                                   >  SRR4302540.4853334/1‑94 (MQ=60)

                            ATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTG                                                                   <  SRR4302540.7616501/94‑1 (MQ=60)

                            ATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTG                                                                   >  SRR4302540.1826925/1‑94 (MQ=60)

                              TGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGAC                                                                 <  SRR4302540.5098565/94‑1 (MQ=60)

                               GGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACC                                                                >  SRR4302540.8840947/1‑94 (MQ=60)

                               GGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACC                                                                <  SRR4302540.1832357/94‑1 (MQ=60)

                               GGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACC                                                                <  SRR4302540.2353622/94‑1 (MQ=60)

                                GCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCA                                                               <  SRR4302540.5670090/94‑1 (MQ=60)

                                 CGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGTATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCAC                                                              <  SRR4302540.4413836/94‑1 (MQ=60)

                                 CGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCAC                                                              >  SRR4302540.5236024/1‑94 (MQ=60)

                                 CGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCAC                                                              <  SRR4302540.4892252/94‑1 (MQ=60)

                                 CGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCAC                                                              <  SRR4302540.5745423/94‑1 (MQ=60)

                                 CGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCAC                                                              >  SRR4302540.6480421/1‑94 (MQ=60)

                                 CGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCAC                                                              <  SRR4302540.9723725/94‑1 (MQ=60)

                                 CGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCAC                                                              >  SRR4302540.8999083/1‑94 (MQ=60)

                                 CGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCAC                                                              >  SRR4302540.3795253/1‑94 (MQ=60)

                                 CGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCAC                                                              >  SRR4302540.7298615/1‑94 (MQ=60)

                                 CGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCAC                                                              <  SRR4302540.9416315/94‑1 (MQ=60)

                                 CGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCAC                                                              <  SRR4302540.7862578/94‑1 (MQ=60)

                                  GCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACCGACCACT                                                             >  SRR4302540.2474567/1‑94 (MQ=60)

                                   CTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTG                                                            <  SRR4302540.2764408/94‑1 (MQ=60)

                                   CTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTG                                                            <  SRR4302540.2764407/94‑1 (MQ=60)

                                   CTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTG                                                            >  SRR4302540.5027706/1‑94 (MQ=60)

                                   CTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTG                                                            >  SRR4302540.1048949/1‑94 (MQ=60)

                                     GCATCCATTGGTATTTACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGT                                                          >  SRR4302540.1662699/1‑94 (MQ=60)

                                     GCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGT                                                          <  SRR4302540.4697987/94‑1 (MQ=60)

                                      CATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTC                                                         >  SRR4302540.8325721/1‑94 (MQ=60)

                                      CATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTC                                                         <  SRR4302540.8706571/94‑1 (MQ=60)

                                      CATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTC                                                         >  SRR4302540.101879/1‑94 (MQ=60)

                                       ATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCaagcgctagatcggaagagcggttcag                                                        >  SRR4302540.8033524/1‑67 (MQ=60)

                                       ATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCA                                                        >  SRR4302540.256432/1‑94 (MQ=60)

                                       ATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCA                                                        >  SRR4302540.5436790/1‑94 (MQ=60)

                                        TCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAG                                                       <  SRR4302540.3954559/94‑1 (MQ=60)

                                        TCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAG                                                       <  SRR4302540.6282196/94‑1 (MQ=60)

                                        TCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAG                                                       <  SRR4302540.3926329/94‑1 (MQ=60)

                                         CCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGC                                                      <  SRR4302540.5650072/94‑1 (MQ=60)

                                         CCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGC                                                      >  SRR4302540.2490661/1‑94 (MQ=60)

                                         CCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTCGTCAGC                                                      >  SRR4302540.6957895/1‑94 (MQ=60)

                                          CATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCG                                                     >  SRR4302540.8820618/1‑94 (MQ=60)

                                          CATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCA                                                     <  SRR4302540.9098198/94‑1 (MQ=60)

                                          CATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCA                                                     >  SRR4302540.8801318/1‑94 (MQ=60)

                                           ATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAG                                                    <  SRR4302540.9486114/94‑1 (MQ=60)

                                           ATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAG                                                    >  SRR4302540.760553/1‑94 (MQ=60)

                                           ATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAG                                                    >  SRR4302540.10022036/1‑94 (MQ=60)

                                           ATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAG                                                    <  SRR4302540.2964737/94‑1 (MQ=60)

                                           ATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAG                                                    >  SRR4302540.4708501/1‑94 (MQ=60)

                                           ATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAG                                                    <  SRR4302540.2964736/94‑1 (MQ=60)

                                           ATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGAGGCCGATACAGGCGAAATTCCTGTCGTCCTGATTCAAA‑TGACCACTGGTacgcatc                                                   >  SRR4302540.7055126/1‑87 (MQ=60)

                                            TTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGC                                                   >  SRR4302540.4209510/1‑94 (MQ=60)

                                             TGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCG                                                  >  SRR4302540.7541227/1‑94 (MQ=60)

                                              GGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA                                                 <  SRR4302540.4542467/94‑1 (MQ=60)

                                              GGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA                                                 >  SRR4302540.469790/1‑94 (MQ=60)

                                              GGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA                                                 >  SRR4302540.9117250/1‑94 (MQ=60)

                                              GGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA                                                 >  SRR4302540.1218574/1‑94 (MQ=60)

                                               GTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAC                                                >  SRR4302540.2509790/1‑94 (MQ=60)

                                               GTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAC                                                >  SRR4302540.6993526/1‑94 (MQ=60)

                                                TATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGCCC                                               >  SRR4302540.605933/1‑94 (MQ=60)

                                                TATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACC                                               >  SRR4302540.8359716/1‑94 (MQ=60)

                                                TATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACC                                               <  SRR4302540.7629054/94‑1 (MQ=60)

                                                TATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACC                                               <  SRR4302540.6380965/94‑1 (MQ=60)

                                                 ATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCC                                              >  SRR4302540.2317358/1‑94 (MQ=60)

                                                 ATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCC                                              >  SRR4302540.1199771/1‑94 (MQ=60)

                                                  TTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCC                                             <  SRR4302540.8922122/94‑1 (MQ=60)

                                                   TGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCC                                            >  SRR4302540.5019116/1‑94 (MQ=60)

                                                   TGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCC                                            <  SRR4302540.9855314/94‑1 (MQ=60)

                                                   TGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCC                                            >  SRR4302540.5019115/1‑94 (MQ=60)

                                                     GCAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCAC                                          <  SRR4302540.2771661/94‑1 (MQ=60)

                                                     ACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCAC                                          <  SRR4302540.4914307/94‑1 (MQ=60)

                                                       AGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACAT                                        <  SRR4302540.3659528/94‑1 (MQ=60)

                                                       AGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACAT                                        <  SRR4302540.5877761/94‑1 (MQ=60)

                                                       AGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACAT                                        <  SRR4302540.7405362/94‑1 (MQ=60)

                                                       AGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACAT                                        <  SRR4302540.3588929/94‑1 (MQ=60)

                                                        GGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATG                                       <  SRR4302540.657605/94‑1 (MQ=60)

                                                         GTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGG                                      >  SRR4302540.8911248/1‑94 (MQ=60)

                                                          TCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGA                                     >  SRR4302540.1340005/1‑94 (MQ=60)

                                                          GCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGA                                     <  SRR4302540.3554260/94‑1 (MQ=60)

                                                           CTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAA                                    <  SRR4302540.3420987/94‑1 (MQ=60)

                                                           CTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAA                                    >  SRR4302540.146192/1‑94 (MQ=60)

                                                            TAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAA                                   <  SRR4302540.3268132/94‑1 (MQ=60)

                                                            TAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAA                                   <  SRR4302540.3348790/94‑1 (MQ=60)

                                                            TAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAA                                   <  SRR4302540.4633622/94‑1 (MQ=60)

                                                            TAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAA                                   <  SRR4302540.5953833/94‑1 (MQ=60)

                                                             AATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAG                                  <  SRR4302540.1277529/94‑1 (MQ=60)

                                                              ATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGC                                 >  SRR4302540.406939/1‑94 (MQ=60)

                                                               TGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCC                                >  SRR4302540.1545048/1‑94 (MQ=60)

                                                                GGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCT                               >  SRR4302540.8948891/1‑94 (MQ=60)

                                                                GGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTCACCCCTGGTCAGCAGCGACACCCACATGGAAAGCCT                               >  SRR4302540.8948587/1‑94 (MQ=60)

                                                                 GTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTC                              >  SRR4302540.3076555/1‑94 (MQ=60)

                                                                 GTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTC                              <  SRR4302540.8574845/94‑1 (MQ=60)

                                                                 GTGGGATTCACCCGGCGTACGATACAGGCGAAAGTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTC                              <  SRR4302540.8574846/94‑1 (MQ=60)

                                                                  TGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCA                             >  SRR4302540.8897704/1‑94 (MQ=60)

                                                                  TGCGATTCACACGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGGCCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCA                             <  SRR4302540.6791504/94‑1 (MQ=60)

                                                                   GGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCAT                            <  SRR4302540.4352036/94‑1 (MQ=60)

                                                                   GGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCAT                            <  SRR4302540.9280731/94‑1 (MQ=60)

                                                                   GGGACTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCAT                            <  SRR4302540.9678238/94‑1 (MQ=60)

                                                                    GGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATC                           <  SRR4302540.7234342/94‑1 (MQ=60)

                                                                    GGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATC                           >  SRR4302540.8668971/1‑94 (MQ=60)

                                                                    GGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATC                           >  SRR4302540.6856311/1‑94 (MQ=60)

                                                                     GATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCT                          <  SRR4302540.1452731/94‑1 (MQ=60)

                                                                     GATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCT                          <  SRR4302540.8097699/94‑1 (MQ=60)

                                                                      ATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTA                         >  SRR4302540.6274057/1‑94 (MQ=60)

                                                                       TTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAA                        >  SRR4302540.1077016/1‑94 (MQ=60)

                                                                       TTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAA                        <  SRR4302540.3192485/94‑1 (MQ=60)

                                                                       TTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAA                        >  SRR4302540.4134198/1‑94 (MQ=60)

                                                                       TTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAA                        <  SRR4302540.6020036/94‑1 (MQ=60)

                                                                       TTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAA                        <  SRR4302540.1451646/94‑1 (MQ=60)

                                                                       TTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAA                        <  SRR4302540.10036034/94‑1 (MQ=60)

                                                                       TTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGACTCATCTAA                        >  SRR4302540.3883262/1‑94 (MQ=60)

                                                                        TCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAT                       <  SRR4302540.942005/94‑1 (MQ=60)

                                                                        TCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAT                       <  SRR4302540.926009/94‑1 (MQ=60)

                                                                         CACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATG                      >  SRR4302540.7714315/1‑94 (MQ=60)

                                                                          ACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGG                     <  SRR4302540.6114532/94‑1 (MQ=60)

                                                                          ACGCGGCGAACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGG                     <  SRR4302540.10001419/94‑1 (MQ=60)

                                                                           CGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGC                    >  SRR4302540.1453106/1‑94 (MQ=60)

                                                                            GCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCG                   <  SRR4302540.823064/94‑1 (MQ=60)

                                                                            GCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCG                   <  SRR4302540.6260022/94‑1 (MQ=60)

                                                                              GGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCA                 >  SRR4302540.8585254/1‑94 (MQ=60)

                                                                              GGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCA                 >  SRR4302540.8529772/1‑94 (MQ=60)

                                                                               GCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCAT                <  SRR4302540.7805189/94‑1 (MQ=60)

                                                                                GGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATT               <  SRR4302540.7560941/94‑1 (MQ=60)

                                                                                 GGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTC              >  SRR4302540.4357033/1‑94 (MQ=60)

                                                                                 GGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTC              >  SRR4302540.576398/1‑94 (MQ=60)

                                                                                 GGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTC              <  SRR4302540.5814307/94‑1 (MQ=60)

                                                                                 GGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTC              <  SRR4302540.9126056/94‑1 (MQ=60)

                                                                                  GACGATACAGGCGAAATTCCTGTCGCCCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCT             <  SRR4302540.8730122/94‑1 (MQ=60)

                                                                                  GACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCT             <  SRR4302540.4431447/94‑1 (MQ=60)

                                                                                  GACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCT             <  SRR4302540.2600390/94‑1 (MQ=60)

                                                                                  GACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCT             <  SRR4302540.773620/94‑1 (MQ=60)

                                                                                   ACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTG            <  SRR4302540.3834570/94‑1 (MQ=60)

                                                                                   ACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTC            >  SRR4302540.6592212/1‑94 (MQ=60)

                                                                                     GATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCT          <  SRR4302540.7553434/94‑1 (MQ=60)

                                                                                     GATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCT          >  SRR4302540.4515773/1‑94 (MQ=60)

                                                                                     GATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCT          >  SRR4302540.3960234/1‑94 (MQ=60)

                                                                                      ATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTC         <  SRR4302540.3861502/94‑1 (MQ=60)

                                                                                       TACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCG        >  SRR4302540.10050793/1‑94 (MQ=60)

                                                                                         CAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCT      >  SRR4302540.4723527/1‑94 (MQ=60)

                                                                                          AGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCTG     >  SRR4302540.5233122/1‑94 (MQ=60)

                                                                                          AGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCTG     <  SRR4302540.114317/94‑1 (MQ=60)

                                                                                          AGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCTG     <  SRR4302540.8303223/94‑1 (MQ=60)

                                                                                           GGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCTGA    <  SRR4302540.1833675/94‑1 (MQ=60)

                                                                                            GCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCTGAC   >  SRR4302540.348867/1‑94 (MQ=60)

                                                                                             CGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCTGACA  >  SRR4302540.9501499/1‑94 (MQ=60)

                                                                                             CGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCTGACA  >  SRR4302540.7231774/1‑94 (MQ=60)

TTTAGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCTGACA  >  NC_000913/3359206‑3359392

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`