Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,365,636	A→G	R59G (AGG→GGG)	yhcG →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,365,636	0	A	G	99.8%	1509.5 / ‑5.4	467	R59G (AGG→GGG)	yhcG	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (231/235); total (231/236)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.20e-01

Only 100 of 496 total aligned reads displayed.

GAAACGGTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCAGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGC  >  NC_000913/3365546‑3365725

gaAACGGTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCggg                                                                                         >  1:1426359/1‑93 (MQ=255)

gaAACGGTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCggg                                                                                         >  1:4217204/1‑93 (MQ=255)

gaAACGGTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCggg                                                                                         >  2:6832739/1‑93 (MQ=255)

    cGGTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTg                                                                                     >  2:3744952/1‑93 (MQ=255)

     ggTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGc                                                                                    >  1:397988/1‑93 (MQ=255)

      gTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCg                                                                                   <  1:6452016/93‑1 (MQ=255)

      gTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCg                                                                                   <  1:5816836/93‑1 (MQ=255)

      gTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCg                                                                                   >  2:1065032/1‑93 (MQ=255)

       tACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGt                                                                                  >  2:6229108/1‑93 (MQ=255)

       tACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGt                                                                                  >  1:3330756/1‑93 (MQ=255)

        aCGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTa                                                                                 <  2:698361/93‑1 (MQ=255)

         cGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTAt                                                                                >  1:5445161/1‑93 (MQ=255)

          gTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATg                                                                               <  2:6482004/93‑1 (MQ=255)

          gTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATg                                                                               <  1:9323057/93‑1 (MQ=255)

           tAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATgg                                                                              <  2:5119132/93‑1 (MQ=255)

           tAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATgg                                                                              >  2:5806523/1‑93 (MQ=255)

             gCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTg                                                                            <  1:8306636/93‑1 (MQ=255)

             gCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTg                                                                            <  2:2569149/93‑1 (MQ=255)

                ttAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTgcgc                                                                         >  2:7268435/1‑93 (MQ=255)

                   aCGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGc                                                                      <  1:7342615/93‑1 (MQ=255)

                      cgTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTaa                                                                   <  1:1163432/93‑1 (MQ=255)

                       gTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAAt                                                                  <  2:3457264/93‑1 (MQ=255)

                        ttAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATc                                                                 >  2:9272745/1‑93 (MQ=255)

                        ttAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATc                                                                 <  2:8929625/93‑1 (MQ=255)

                        ttAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATc                                                                 >  1:9733404/1‑93 (MQ=255)

                         tAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCa                                                                >  2:8624890/1‑93 (MQ=255)

                          aaTGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCaa                                                               >  1:7967360/1‑93 (MQ=255)

                          aaTGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCaa                                                               <  2:8234916/93‑1 (MQ=255)

                           aTGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAg                                                              >  2:7468635/1‑93 (MQ=255)

                            tGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGc                                                             <  1:9614743/93‑1 (MQ=255)

                            tGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGc                                                             <  1:6284715/93‑1 (MQ=255)

                              aCCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGa                                                           <  1:9138685/93‑1 (MQ=255)

                                cgcgACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACt                                                         >  1:8137547/1‑93 (MQ=255)

                                 gcgACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGTGGCTGCGGATGGCGCGCCGGTCATCAAGAGACTa                                                        >  2:8421098/1‑93 (MQ=255)

                                 gcgACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTa                                                        <  1:7662082/93‑1 (MQ=255)

                                 gcgACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTa                                                        >  1:3733891/1‑93 (MQ=255)

                                 gcgACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTa                                                        <  2:8124665/93‑1 (MQ=255)

                                  cgACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTAt                                                       <  1:5374802/93‑1 (MQ=255)

                                   gACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATc                                                      >  1:9826419/1‑93 (MQ=255)

                                    aCGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCa                                                     >  2:3173970/1‑93 (MQ=255)

                                     cGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCaa                                                    <  2:7834517/93‑1 (MQ=255)

                                      gTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCaaa                                                   <  1:6739862/93‑1 (MQ=255)

                                      gTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCaaa                                                   <  2:2985558/93‑1 (MQ=255)

                                       tACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAg                                                  >  1:7117095/1‑93 (MQ=255)

                                       tACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAg                                                  >  1:3541259/1‑93 (MQ=255)

                                         ccAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGa                                                <  1:4561357/93‑1 (MQ=255)

                                          cAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGAt                                               >  2:8800742/1‑93 (MQ=255)

                                           aGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGAtt                                              >  1:4457388/1‑93 (MQ=255)

                                            ggAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGAttt                                             >  2:2244687/1‑93 (MQ=255)

                                            ggAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGAttt                                             >  2:4626938/1‑93 (MQ=255)

                                            ggAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGAttt                                             >  2:9086272/1‑93 (MQ=255)

                                             gAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTa                                            <  2:3236503/93‑1 (MQ=255)

                                             gAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTa                                            <  1:994686/93‑1 (MQ=255)

                                             gAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTa                                            <  1:6862345/93‑1 (MQ=255)

                                              aaaTTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTAt                                           <  2:474179/93‑1 (MQ=255)

                                              aaaTTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTAt                                           <  2:6655326/93‑1 (MQ=255)

                                               aaTTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATg                                          >  1:6129592/1‑93 (MQ=255)

                                                aTTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGt                                         <  1:10000581/93‑1 (MQ=255)

                                                    gCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTaa                                     <  1:9502086/93‑1 (MQ=255)

                                                       gacgaATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGt                                  >  2:9361196/1‑93 (MQ=255)

                                                        acgaATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGta                                 <  1:5189142/93‑1 (MQ=255)

                                                        acgaATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGAGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATCTATGTCTAAGGta                                 <  2:8466850/93‑1 (MQ=255)

                                                          gaATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGtata                               <  2:7379611/93‑1 (MQ=255)

                                                          gaATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGtata                               >  1:2643047/1‑93 (MQ=255)

                                                           aaTTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATaa                              >  2:9419600/1‑93 (MQ=255)

                                                           aaTTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATaa                              >  1:872208/1‑93 (MQ=255)

                                                           aaTTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATaa                              >  2:4937127/1‑93 (MQ=255)

                                                            aTTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAg                             >  2:4475033/1‑93 (MQ=255)

                                                             ttGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGc                            <  1:156661/93‑1 (MQ=255)

                                                             ttGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGc                            >  2:8761180/1‑93 (MQ=255)

                                                             ttGTCGAATTTGAACAAGGTGGCGAGGCCGCGGCTGCGTATGGTGCGCAGCTAATAGAGCGACTATCAAAGGATGTACGTCTAAGGTATCAga                            >  1:192316/1‑92 (MQ=255)

                                                               gTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGt                          <  2:7604323/93‑1 (MQ=255)

                                                               gTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGt                          >  2:191212/1‑93 (MQ=255)

                                                               gTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGt                          >  2:1338182/1‑93 (MQ=255)

                                                               gTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGt                          <  2:1726363/93‑1 (MQ=255)

                                                                tCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTg                         <  1:5575904/93‑1 (MQ=255)

                                                                 cGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTgg                        <  1:8523091/93‑1 (MQ=255)

                                                                    agttGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGtt                     <  1:3127389/91‑1 (MQ=255)

                                                                    aTTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGtt                     >  2:5889648/1‑93 (MQ=255)

                                                                     tttGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTtc                    >  2:282142/1‑93 (MQ=255)

                                                                       tGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTtctc                  <  1:2402550/93‑1 (MQ=255)

                                                                        gAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCGAAGGTATAAGCGTGGGTTctct                 <  2:6406105/93‑1 (MQ=255)

                                                                            aaGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCaa             >  1:2892807/1‑93 (MQ=255)

                                                                            aaGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCaa             <  1:2158370/93‑1 (MQ=255)

                                                                              ggTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCaaaa           >  1:4885161/1‑93 (MQ=255)

                                                                               gTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCaaaaa          >  2:4024461/1‑93 (MQ=255)

                                                                                tGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCaaaaaa         <  1:1059160/93‑1 (MQ=255)

                                                                                 ggCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAAc        <  1:8901449/93‑1 (MQ=255)

                                                                                 ggCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAAc        >  1:4031943/1‑93 (MQ=255)

                                                                                  gCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACt       <  2:5369696/93‑1 (MQ=255)

                                                                                  gCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACt       <  2:9793134/93‑1 (MQ=255)

                                                                                    gAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTa     <  2:2437165/93‑1 (MQ=255)

                                                                                    gAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTa     <  2:1558225/93‑1 (MQ=255)

                                                                                    gAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTa     <  1:693432/93‑1 (MQ=255)

                                                                                    gAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTa     <  1:1766571/93‑1 (MQ=255)

                                                                                     aGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTAc    <  2:6057880/93‑1 (MQ=255)

                                                                                     aGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTAc    <  1:4315447/93‑1 (MQ=255)

                                                                                       gCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCGAAAAACTTACGc  <  1:4712452/93‑1 (MQ=255)

                                                                                       gCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGc  <  1:7437277/93‑1 (MQ=255)

                                                                                       gCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGc  <  1:5068411/93‑1 (MQ=255)

GAAACGGTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCAGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGC  >  NC_000913/3365546‑3365725

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 275 total aligned reads displayed.

ACGGAAACGGTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCAGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAA  >  NC_000913/3365543‑3365729

ACGGAAACGGTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCG                                                                                               >  SRR4302540.3731816/1‑94 (MQ=60)

 CGGAAACGGTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGG                                                                                              >  SRR4302540.8168100/1‑94 (MQ=60)

  GGAAACGGTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGG                                                                                             <  SRR4302540.7236880/94‑1 (MQ=60)

  GGAAACGGTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGG                                                                                             <  SRR4302540.2227809/94‑1 (MQ=60)

  GGAAACGGTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGG                                                                                             <  SRR4302540.4493165/94‑1 (MQ=60)

  GGAAACGGTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGG                                                                                             >  SRR4302540.1441800/1‑94 (MQ=60)

  GGAAACGGTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGG                                                                                             >  SRR4302540.6603472/1‑94 (MQ=60)

    AAACGGTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGC                                                                                           >  SRR4302540.8796832/1‑94 (MQ=60)

    AAACGGTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGCCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGC                                                                                           <  SRR4302540.3709505/94‑1 (MQ=60)

     AACGGTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCT                                                                                          <  SRR4302540.4710162/94‑1 (MQ=60)

     AACGGTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCT                                                                                          <  SRR4302540.3512693/94‑1 (MQ=60)

       CGGTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGC                                                                                        >  SRR4302540.402116/1‑94 (MQ=60)

        GGTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCG                                                                                       >  SRR4302540.4341813/1‑94 (MQ=60)

        GGTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCG                                                                                       >  SRR4302540.2156054/1‑94 (MQ=60)

        GGTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCG                                                                                       >  SRR4302540.4995433/1‑94 (MQ=60)

        GGTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCG                                                                                       <  SRR4302540.2602819/94‑1 (MQ=60)

         GTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGT                                                                                      >  SRR4302540.9296050/1‑94 (MQ=60)

         GTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGT                                                                                      <  SRR4302540.5881135/94‑1 (MQ=60)

         GTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGT                                                                                      >  SRR4302540.8075764/1‑94 (MQ=60)

         GTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGT                                                                                      <  SRR4302540.6523827/94‑1 (MQ=60)

         GTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGT                                                                                      >  SRR4302540.3367325/1‑94 (MQ=60)

         GTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGT                                                                                      <  SRR4302540.4060593/94‑1 (MQ=60)

         GGACGTCGCGTTAACGCGTTAGTGACCTGGACGTCCCAGGCAATTTGCCGACGAATTGTCTAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGT                                                                                      <  SRR4302540.5881136/94‑1 (MQ=48)

          TACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTA                                                                                     <  SRR4302540.2341463/94‑1 (MQ=60)

           ACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTAT                                                                                    <  SRR4302540.5076014/94‑1 (MQ=60)

           ACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTAT                                                                                    >  SRR4302540.5505081/1‑94 (MQ=60)

           ACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTAT                                                                                    >  SRR4302540.4609228/1‑94 (MQ=60)

            CGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATG                                                                                   >  SRR4302540.4587200/1‑94 (MQ=60)

            CGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATG                                                                                   >  SRR4302540.1103918/1‑94 (MQ=60)

             GTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGG                                                                                  >  SRR4302540.4144695/1‑94 (MQ=60)

              TAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGT                                                                                 <  SRR4302540.3558365/94‑1 (MQ=60)

                GCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGC                                                                               <  SRR4302540.8403083/94‑1 (MQ=60)

                GCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGC                                                                               <  SRR4302540.4345018/94‑1 (MQ=60)

                 CGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCG                                                                              <  SRR4302540.1283454/94‑1 (MQ=60)

                 CGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCG                                                                              <  SRR4302540.1690013/94‑1 (MQ=60)

                 CGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCG                                                                              <  SRR4302540.1283456/94‑1 (MQ=60)

                   TTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCA                                                                            >  SRR4302540.2985819/1‑94 (MQ=60)

                   TTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCA                                                                            >  SRR4302540.8465128/1‑94 (MQ=60)

                    TAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAGCAAGGTGGAGAGGCCGGGGATGCGTCTGGGGCGCAC                                                                           >  SRR4302540.10118990/1‑94 (MQ=60)

                     AACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGC                                                                          >  SRR4302540.7707834/1‑94 (MQ=60)

                      ACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCT                                                                         <  SRR4302540.1072054/94‑1 (MQ=60)

                      ACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCT                                                                         <  SRR4302540.9932751/94‑1 (MQ=60)

                      ACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCT                                                                         <  SRR4302540.7424541/94‑1 (MQ=60)

                        GCGTTAATGACCGCGACGTACCAGGAAATTGGCCTACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAA                                                                       <  SRR4302540.8340332/94‑1 (MQ=60)

                        GCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAA                                                                       >  SRR4302540.9763878/1‑94 (MQ=60)

                         CGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAAT                                                                      <  SRR4302540.6002422/94‑1 (MQ=60)

                         CGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAAT                                                                      <  SRR4302540.1175509/94‑1 (MQ=60)

                         CGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAAT                                                                      >  SRR4302540.1164377/1‑94 (MQ=60)

                         CGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAAT                                                                      >  SRR4302540.9559671/1‑94 (MQ=60)

                          GTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATC                                                                     <  SRR4302540.9746556/94‑1 (MQ=60)

                          GTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATC                                                                     <  SRR4302540.3012698/94‑1 (MQ=60)

                          GTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGACGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGtgaagc                                                                     >  SRR4302540.9048966/1‑88 (MQ=60)

                           TTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCA                                                                    <  SRR4302540.5222643/94‑1 (MQ=60)

                            TAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAA                                                                   >  SRR4302540.8060213/1‑94 (MQ=60)

                             AATGACCGCGACGTACCAGGAAATTGGCCGACGGATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAG                                                                  <  SRR4302540.3198910/94‑1 (MQ=60)

                             AATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCATCTAATCAAG                                                                  <  SRR4302540.8781672/94‑1 (MQ=60)

                             AATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAG                                                                  >  SRR4302540.7847543/1‑94 (MQ=60)

                             AATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAG                                                                  >  SRR4302540.7577981/1‑94 (MQ=60)

                              ATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGC                                                                 <  SRR4302540.7912188/94‑1 (MQ=60)

                              ATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGC                                                                 >  SRR4302540.5165672/1‑94 (MQ=60)

                              ATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGC                                                                 <  SRR4302540.7333170/94‑1 (MQ=60)

                               TGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCG                                                                >  SRR4302540.9406186/1‑94 (MQ=60)

                               TGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCG                                                                <  SRR4302540.6354661/94‑1 (MQ=60)

                               TGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCG                                                                <  SRR4302540.9728104/94‑1 (MQ=60)

                               TGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCG                                                                <  SRR4302540.7435681/94‑1 (MQ=60)

                                GACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGA                                                               <  SRR4302540.4940140/94‑1 (MQ=60)

                                 ACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGAC                                                              >  SRR4302540.2814578/1‑94 (MQ=60)

                                 ACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGAC                                                              <  SRR4302540.9248485/94‑1 (MQ=60)

                                 ACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGAC                                                              <  SRR4302540.1042540/94‑1 (MQ=60)

                                  CCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACT                                                             <  SRR4302540.4050833/94‑1 (MQ=60)

                                  CCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACT                                                             <  SRR4302540.361713/94‑1 (MQ=60)

                                  CCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACT                                                             >  SRR4302540.2550071/1‑94 (MQ=60)

                                  CCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACT                                                             >  SRR4302540.1647950/1‑94 (MQ=60)

                                  CCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCGGCGTATGGTGCGCAGCTAATCAAGCGACT                                                             >  SRR4302540.5651165/1‑94 (MQ=60)

                                   CGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTA                                                            >  SRR4302540.3774627/1‑94 (MQ=60)

                                   CGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTA                                                            >  SRR4302540.6125212/1‑94 (MQ=60)

                                    GCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTAT                                                           <  SRR4302540.10062613/94‑1 (MQ=60)

                                     CGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATC                                                          <  SRR4302540.5433898/94‑1 (MQ=60)

                                     CGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATC                                                          <  SRR4302540.5433897/94‑1 (MQ=60)

                                     CGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATC                                                          >  SRR4302540.9941370/1‑94 (MQ=60)

                                     CGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATC                                                          >  SRR4302540.4122619/1‑94 (MQ=60)

                                     CGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATC                                                          >  SRR4302540.10102575/1‑94 (MQ=60)

                                      GACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCA                                                         <  SRR4302540.6832647/94‑1 (MQ=60)

                                      GACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCA                                                         >  SRR4302540.556164/1‑94 (MQ=60)

                                      GACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCA                                                         <  SRR4302540.951613/94‑1 (MQ=60)

                                      GACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCA                                                         <  SRR4302540.3813158/94‑1 (MQ=60)

                                      GACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCA                                                         >  SRR4302540.3019649/1‑94 (MQ=60)

                                      GACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCA                                                         <  SRR4302540.2870607/94‑1 (MQ=60)

                                       ACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAA                                                        <  SRR4302540.8293559/94‑1 (MQ=60)

                                       ACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAA                                                        <  SRR4302540.8293558/94‑1 (MQ=60)

                                       ACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAA                                                        <  SRR4302540.9865336/94‑1 (MQ=60)

                                       ACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAA                                                        <  SRR4302540.9865337/94‑1 (MQ=60)

                                        CGTACCAGGAGATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAA                                                       <  SRR4302540.4566297/94‑1 (MQ=60)

                                         GTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAG                                                      <  SRR4302540.6814315/94‑1 (MQ=60)

                                         GTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAG                                                      >  SRR4302540.7196325/1‑94 (MQ=60)

                                         GTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAG                                                      >  SRR4302540.9126732/1‑94 (MQ=60)

                                         GTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAG                                                      <  SRR4302540.1569391/94‑1 (MQ=60)

                                           ACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGA                                                    >  SRR4302540.6910383/1‑94 (MQ=60)

                                           ACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGA                                                    >  SRR4302540.9644963/1‑94 (MQ=60)

                                           ACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGA                                                    >  SRR4302540.9644962/1‑94 (MQ=60)

                                           ACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGA                                                    >  SRR4302540.2268974/1‑94 (MQ=60)

                                            CCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGAT                                                   <  SRR4302540.4610639/94‑1 (MQ=60)

                                            CCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGAT                                                   <  SRR4302540.9258457/94‑1 (MQ=60)

                                            CCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGAT                                                   >  SRR4302540.6037384/1‑94 (MQ=60)

                                            CCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGAT                                                   <  SRR4302540.4610643/94‑1 (MQ=60)

                                            CCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGAGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGAT                                                   <  SRR4302540.3353349/94‑1 (MQ=60)

                                            CCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGAGGCGAGGCCGGGGCCGCGCATGGTGCGCAGCTAATCACGCGACTATCAAAGGCT                                                   >  SRR4302540.6247369/1‑94 (MQ=60)

                                             CAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGACGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATT                                                  <  SRR4302540.6972913/94‑1 (MQ=60)

                                              AGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTT                                                 <  SRR4302540.724346/94‑1 (MQ=60)

                                              AGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTT                                                 >  SRR4302540.8850645/1‑94 (MQ=60)

                                               GGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTA                                                >  SRR4302540.8978432/1‑94 (MQ=60)

                                                GAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTAT                                               <  SRR4302540.2750748/94‑1 (MQ=60)

                                                GAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTAT                                               <  SRR4302540.7066619/94‑1 (MQ=60)

                                                GAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTAT                                               <  SRR4302540.7676997/94‑1 (MQ=60)

                                                GAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTAT                                               <  SRR4302540.1004818/94‑1 (MQ=60)

                                                GAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTAT                                               <  SRR4302540.6938400/94‑1 (MQ=60)

                                                GAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTAT                                               <  SRR4302540.4838904/94‑1 (MQ=60)

                                                GAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTAT                                               <  SRR4302540.9483444/94‑1 (MQ=60)

                                                 AAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATG                                              <  SRR4302540.3628355/94‑1 (MQ=60)

                                                  AATTCGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGT                                             <  SRR4302540.6504765/94‑1 (MQ=60)

                                                   ATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTC                                            <  SRR4302540.10117086/94‑1 (MQ=60)

                                                    TTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCT                                           >  SRR4302540.5269503/1‑94 (MQ=60)

                                                     TGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTA                                          >  SRR4302540.6497210/1‑94 (MQ=60)

                                                     TGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTA                                          >  SRR4302540.7957836/1‑94 (MQ=60)

                                                     TGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTA                                          <  SRR4302540.2030067/94‑1 (MQ=60)

                                                     TGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTA                                          <  SRR4302540.1553713/94‑1 (MQ=60)

                                                       GCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAG                                        >  SRR4302540.5235282/1‑94 (MQ=60)

                                                       GCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAG                                        <  SRR4302540.9614681/94‑1 (MQ=60)

                                                        CCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGG                                       >  SRR4302540.6217263/1‑94 (MQ=60)

                                                        CCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGG                                       >  SRR4302540.6888733/1‑94 (MQ=60)

                                                        CCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGG                                       >  SRR4302540.4102700/1‑94 (MQ=60)

                                                         CGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTACTCAAGCGACTATCAAAGGAGTTATGTCTAAGGT                                      >  SRR4302540.4504472/1‑94 (MQ=60)

                                                          GACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTA                                     <  SRR4302540.2579127/94‑1 (MQ=60)

                                                            CGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATA                                   >  SRR4302540.10068489/1‑94 (MQ=60)

                                                            CGAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATA                                   >  SRR4302540.2671719/1‑94 (MQ=60)

                                                             GAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAA                                  >  SRR4302540.881461/1‑94 (MQ=60)

                                                             GAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAA                                  >  SRR4302540.8142860/1‑94 (MQ=60)

                                                             GAATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAA                                  >  SRR4302540.2104492/1‑94 (MQ=60)

                                                              AATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAG                                 >  SRR4302540.9768699/1‑94 (MQ=60)

                                                               ATTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGC                                >  SRR4302540.4707742/1‑94 (MQ=60)

                                                               ATTGTCGAATTTGAACAAGGTGGCGAGGCCGCGGCTGCGTATGGTGCGCAGCTAATAGAGCGACTATCAAAGGATGTACGTCTAAGGTATcaga                                >  SRR4302540.194230/1‑90 (MQ=60)

                                                                TTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCG                               >  SRR4302540.8535277/1‑94 (MQ=60)

                                                                TTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCG                               >  SRR4302540.6945610/1‑94 (MQ=60)

                                                                TTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCG                               <  SRR4302540.7315125/94‑1 (MQ=60)

                                                                TTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCG                               <  SRR4302540.3807650/94‑1 (MQ=60)

                                                                TTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCG                               <  SRR4302540.1203173/94‑1 (MQ=60)

                                                                TTGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCG                               >  SRR4302540.3257584/1‑94 (MQ=60)

                                                                ATGTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCG                               <  SRR4302540.7504703/94‑1 (MQ=60)

                                                                  GTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTG                             <  SRR4302540.7076640/94‑1 (MQ=60)

                                                                  GTCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTG                             <  SRR4302540.5873199/94‑1 (MQ=60)

                                                                   TCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGG                            <  SRR4302540.4455404/94‑1 (MQ=60)

                                                                   TCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGG                            <  SRR4302540.5549002/94‑1 (MQ=60)

                                                                   TCGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGG                            <  SRR4302540.6308928/94‑1 (MQ=60)

                                                                    CGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGG                           >  SRR4302540.2912693/1‑94 (MQ=60)

                                                                    CGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGG                           >  SRR4302540.5578049/1‑94 (MQ=60)

                                                                    CGAATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGG                           <  SRR4302540.8622134/94‑1 (MQ=60)

                                                                    CAAATTTGAAGAAGGTGGCGAGGCCGGAGCTGCGTAGGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGG                           <  SRR4302540.8622133/94‑1 (MQ=60)

                                                                      AATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTT                         <  SRR4302540.340356/94‑1 (MQ=60)

                                                                      AATTTGAACAAGGTGGCGAGGCCAGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTT                         <  SRR4302540.7012910/94‑1 (MQ=60)

                                                                       ATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTC                        <  SRR4302540.8077362/94‑1 (MQ=60)

                                                                       ATTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTC                        <  SRR4302540.5500446/94‑1 (MQ=60)

                                                                       AGTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTC                        <  SRR4302540.3161534/94‑1 (MQ=60)

                                                                        TTTGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCT                       <  SRR4302540.5262396/94‑1 (MQ=60)

                                                                          TGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCT                     <  SRR4302540.2428460/94‑1 (MQ=60)

                                                                          TGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCT                     <  SRR4302540.9726512/94‑1 (MQ=60)

                                                                          TGAACAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCT                     <  SRR4302540.1682087/94‑1 (MQ=60)

                                                                          TGAACAAGGGCGCGAGGCCGGGGCTGCGTATGGTGCGAAGCTAATCAAGCGACGATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCT                     <  SRR4302540.8759790/94‑1 (MQ=60)

                                                                              CAAGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAA                 >  SRR4302540.3948668/1‑94 (MQ=60)

                                                                                AGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAA               >  SRR4302540.4937640/1‑94 (MQ=60)

                                                                                AGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAA               >  SRR4302540.4293706/1‑94 (MQ=60)

                                                                                AGGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAA               >  SRR4302540.5420130/1‑94 (MQ=60)

                                                                                 GGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAA              >  SRR4302540.9975452/1‑94 (MQ=60)

                                                                                 GGTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAA              <  SRR4302540.6693346/94‑1 (MQ=60)

                                                                                 GGTGGCGAGGCCGGGCCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAA              <  SRR4302540.8948358/94‑1 (MQ=60)

                                                                                  GTGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAA             <  SRR4302540.2290215/94‑1 (MQ=60)

                                                                                   TGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAAC            >  SRR4302540.4075420/1‑94 (MQ=60)

                                                                                   TGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAAC            >  SRR4302540.1824421/1‑94 (MQ=60)

                                                                                   TGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAAC            >  SRR4302540.6999664/1‑94 (MQ=60)

                                                                                   TGGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAAC            >  SRR4302540.1824420/1‑94 (MQ=60)

                                                                                    GGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACT           <  SRR4302540.9004491/94‑1 (MQ=60)

                                                                                    GGCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACT           >  SRR4302540.574783/1‑94 (MQ=60)

                                                                                     GCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTT          >  SRR4302540.6715962/1‑94 (MQ=60)

                                                                                     GCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTT          <  SRR4302540.4369296/94‑1 (MQ=60)

                                                                                     GCGAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTT          <  SRR4302540.9427498/94‑1 (MQ=60)

                                                                                     GCGAGGCCGGGGCTGCGAATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTT          <  SRR4302540.9074885/94‑1 (MQ=60)

                                                                                       GAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTAC        <  SRR4302540.1785733/94‑1 (MQ=60)

                                                                                       GAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTAC        >  SRR4302540.7443445/1‑94 (MQ=60)

                                                                                       GAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTAC        <  SRR4302540.4032871/94‑1 (MQ=60)

                                                                                       GAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTAC        <  SRR4302540.1785735/94‑1 (MQ=60)

                                                                                       GAGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTAC        >  SRR4302540.1575641/1‑94 (MQ=60)

                                                                                        AGGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACG       <  SRR4302540.4362433/94‑1 (MQ=60)

                                                                                         GGCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGC      >  SRR4302540.4862817/1‑94 (MQ=60)

                                                                                         GGCCGCGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCCGCAAAAAACTTACGC      <  SRR4302540.6460364/94‑1 (MQ=60)

                                                                                          GCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCGAAAAACTTACGCC     <  SRR4302540.4762809/94‑1 (MQ=60)

                                                                                          GCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCC     <  SRR4302540.7520145/94‑1 (MQ=60)

                                                                                          GCCGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCC     <  SRR4302540.5123209/94‑1 (MQ=60)

                                                                                            CGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCACAGGATTTATGTCTACGGTATTAGCGTGGGTTCTCTGCAAGCAACTTACGCCAA   >  SRR4302540.6888129/1‑94 (MQ=60)

                                                                                            CGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAA   >  SRR4302540.6888130/1‑94 (MQ=60)

                                                                                            CGGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAA   >  SRR4302540.1040099/1‑94 (MQ=60)

                                                                                             GGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAA  >  SRR4302540.5271461/1‑94 (MQ=60)

ACGGAAACGGTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCAGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAA  >  NC_000913/3365543‑3365729

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`