Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,366,054	A→G	H198R (CAC→CGC)	yhcG →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,366,054	0	A	G	99.8%	1305.6 / NA	410	H198R (CAC→CGC)	yhcG	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (197/212); total (198/212)
Fisher's exact test for biased strand distribution p-value = 4.83e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 454 total aligned reads displayed.

GGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACACGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTCAG  >  NC_000913/3365964‑3366143

ggTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAAcgcg                                                                                         >  2:1237324/1‑93 (MQ=255)

 gTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACgcgc                                                                                        <  1:4316492/93‑1 (MQ=255)

  tCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCt                                                                                       >  1:674204/1‑93 (MQ=255)

   cTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTc                                                                                      >  1:5186053/1‑93 (MQ=255)

   cTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTc                                                                                      <  1:8125441/93‑1 (MQ=255)

   cTGTNCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGNGGACACTACTGTNACNTGACAAATCAGCCATGCTGCAACAACGCGCTc                                                                                      >  1:4755039/1‑93 (MQ=255)

    tGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTcc                                                                                     >  1:124227/1‑93 (MQ=255)

     gTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCt                                                                                    >  1:1115785/1‑93 (MQ=255)

     gTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCt                                                                                    >  1:1318489/1‑93 (MQ=255)

          ccAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCga                                                                               <  2:8443820/93‑1 (MQ=255)

          ccAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGAAAAAAAGAGCTCCTGCCga                                                                               >  1:2011811/1‑93 (MQ=255)

          acAGCAAGAGCGGCAAATTGCGAACCAGTTTCATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCga                                                                               <  2:2161603/92‑1 (MQ=255)

           cAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCgag                                                                              >  2:1031993/1‑93 (MQ=255)

           cAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCgag                                                                              >  1:3612867/1‑93 (MQ=255)

           cAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCgag                                                                              >  2:1775308/1‑93 (MQ=255)

            aGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCgaga                                                                             >  1:713094/1‑93 (MQ=255)

             gCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGAc                                                                            >  1:3312592/1‑93 (MQ=255)

             gCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGAc                                                                            <  2:1989907/93‑1 (MQ=255)

             gCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCCGCAACAACGCGCTCCTGCCGAGAc                                                                            >  1:5342534/1‑93 (MQ=255)

               tAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGc                                                                          <  1:891866/93‑1 (MQ=255)

               tAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGc                                                                          >  2:9704995/1‑93 (MQ=255)

                agagCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCa                                                                         >  2:7018417/1‑93 (MQ=255)

                agagCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCa                                                                         <  1:1621376/93‑1 (MQ=255)

                agagCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCa                                                                         >  1:7204861/1‑93 (MQ=255)

                  agCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCata                                                                       <  1:230423/93‑1 (MQ=255)

                   gCGGCAAATTGCGACCCAGTTTAATGAGCGAACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCatat                                                                      <  2:8809317/93‑1 (MQ=255)

                    cGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATAtt                                                                     >  1:2499931/1‑93 (MQ=255)

                    cGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATAtt                                                                     <  2:7866281/93‑1 (MQ=255)

                     ggCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATAttc                                                                    >  2:9911071/1‑93 (MQ=255)

                      gCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATAttct                                                                   <  2:2938640/93‑1 (MQ=255)

                        aaaTTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATTCTGCAACAACGTGCTCCTGCCGAGACGCATAttgttc                                                                 >  2:5301035/1‑93 (MQ=255)

                         aaTTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTcc                                                                <  1:6354800/93‑1 (MQ=255)

                         aaTTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTcc                                                                >  1:687719/1‑93 (MQ=255)

                          aTTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCg                                                               >  1:992151/1‑93 (MQ=255)

                               gACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACa                                                          <  1:3731525/93‑1 (MQ=255)

                               gACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACa                                                          <  2:3288646/93‑1 (MQ=255)

                               gACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACa                                                          <  2:50705/93‑1 (MQ=255)

                                aCCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAg                                                         >  1:1737440/1‑93 (MQ=255)

                                aCCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAg                                                         >  1:6516720/1‑93 (MQ=255)

                                aCCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAg                                                         >  1:4624099/1‑93 (MQ=255)

                                 cccAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAgg                                                        <  2:6940106/93‑1 (MQ=255)

                                  ccAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGc                                                       >  1:8676728/1‑93 (MQ=255)

                                   cAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCg                                                      >  2:1621494/1‑93 (MQ=255)

                                    aGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGa                                                     <  1:8502298/93‑1 (MQ=255)

                                     gTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGAt                                                    <  2:8567236/93‑1 (MQ=255)

                                      ttttATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATa                                                   <  2:3096254/93‑1 (MQ=255)

                                       tttATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATAc                                                  <  1:5649991/93‑1 (MQ=255)

                                         tATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATAcgc                                                <  2:8253797/93‑1 (MQ=255)

                                          aTGAGCGCACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATAcgcg                                               <  2:2636085/93‑1 (MQ=255)

                                           tGAGCGGACACTCCTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGa                                              <  1:8462932/93‑1 (MQ=255)

                                             aGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATc                                            <  1:1559916/93‑1 (MQ=255)

                                               cGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATccc                                          >  2:5720444/1‑93 (MQ=255)

                                                ggACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCt                                         >  1:3940040/1‑93 (MQ=255)

                                                ggACACTACTGTCACATGACAAACCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCt                                         <  1:5772086/93‑1 (MQ=255)

                                                 gACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCCTATTCTTCCGCAACAGGCGATACGCGATCCCtt                                        >  1:9690230/1‑93 (MQ=255)

                                                 gACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCtt                                        <  2:4259372/93‑1 (MQ=255)

                                                  acacTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCttt                                       <  1:9607502/93‑1 (MQ=255)

                                                  acacTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCttt                                       <  1:311434/93‑1 (MQ=255)

                                                     ctactGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTtgtg                                    >  2:6134076/1‑93 (MQ=255)

                                                     ctactGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGAGATCCGTTtgtg                                    >  1:7941478/1‑93 (MQ=255)

                                                       actGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCt                                  >  1:8228282/1‑93 (MQ=255)

                                                       actGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCt                                  >  1:2988425/1‑93 (MQ=255)

                                                        ctGTCACATGACAAATCAGCCATGCTGCAACACCGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTc                                 <  1:9200165/93‑1 (MQ=255)

                                                        ctGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTc                                 <  1:7502992/93‑1 (MQ=255)

                                                         tGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGcgcg                                >  2:7271647/1‑93 (MQ=255)

                                                         tGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCg                                >  1:8793508/1‑93 (MQ=255)

                                                           tCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGaa                              >  1:260320/1‑93 (MQ=255)

                                                             acaTGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAAtt                            >  2:4028241/1‑93 (MQ=255)

                                                             acaTGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAAtt                            >  2:7371549/1‑93 (MQ=255)

                                                             acaTGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAAtt                            >  2:6652795/1‑93 (MQ=255)

                                                                tGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCt                         <  1:5398395/93‑1 (MQ=255)

                                                                tGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCt                         >  2:3903240/1‑93 (MQ=255)

                                                                tGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCt                         <  2:7758817/93‑1 (MQ=255)

                                                                 gACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTg                        <  2:9402180/93‑1 (MQ=255)

                                                                   cAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGa                      <  2:3346083/93‑1 (MQ=255)

                                                                    aaaTCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGaa                     <  2:2214844/93‑1 (MQ=255)

                                                                    aaaTCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGaa                     >  1:7735798/1‑93 (MQ=255)

                                                                     aaTCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAAt                    >  1:4462329/1‑93 (MQ=255)

                                                                       tCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGACTTTCTGGACTTg                  >  1:7063488/1‑93 (MQ=255)

                                                                         aGCCATGCTGCAACACCGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGaa                <  2:1925091/93‑1 (MQ=255)

                                                                          gCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGaaa               <  2:9501683/93‑1 (MQ=255)

                                                                          gCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGaaa               <  2:3654455/93‑1 (MQ=255)

                                                                             aTGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGAt            <  2:6366142/93‑1 (MQ=255)

                                                                             aTGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGAt            <  2:7543158/93‑1 (MQ=255)

                                                                              tgctgcAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATg           >  1:10027778/1‑93 (MQ=255)

                                                                               gctgcAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGa          <  2:9186165/93‑1 (MQ=255)

                                                                               gctgcAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGa          <  1:6014506/93‑1 (MQ=255)

                                                                                 tgcAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAat        >  2:5894767/1‑93 (MQ=255)

                                                                                  tcaacaaCGCCCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAata       <  2:3548481/92‑1 (MQ=255)

                                                                                  gcAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAata       >  2:4501169/1‑93 (MQ=255)

                                                                                  gcAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAata       >  1:7543815/1‑93 (MQ=255)

                                                                                  gcAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAata       <  1:4951796/93‑1 (MQ=255)

                                                                                   caacaaCGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAatat      <  2:2474270/93‑1 (MQ=255)

                                                                                     acaacgCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTc    >  2:6850527/1‑93 (MQ=255)

                                                                                     acaacgCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTc    >  2:4744712/1‑93 (MQ=255)

                                                                                     acaacgCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTc    <  1:2872600/93‑1 (MQ=255)

                                                                                     acaacgCACTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTc    >  2:1339654/1‑93 (MQ=255)

                                                                                       aacgCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTCAg  >  1:3828260/1‑93 (MQ=255)

                                                                                       aacgCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTAAg  >  1:4153001/1‑93 (MQ=255)

                                                                                       aacgCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGAGCTCGAATTTCTGGAATTGAAAGATGAATATTCAg  >  2:281739/1‑93 (MQ=255)

GGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACACGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTCAG  >  NC_000913/3365964‑3366143

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 255 total aligned reads displayed.

GCTGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACACGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTCAGAATC  >  NC_000913/3365961‑3366147

GCTGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACG                                                                                               <  SRR4302540.6840488/94‑1 (MQ=60)

GCTGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACG                                                                                               <  SRR4302540.1222966/94‑1 (MQ=60)

 GTGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGC                                                                                              <  SRR4302540.2622526/94‑1 (MQ=60)

 CTGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGC                                                                                              >  SRR4302540.7802099/1‑94 (MQ=60)

 CTGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGC                                                                                              >  SRR4302540.9968715/1‑94 (MQ=60)

 CTGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGC                                                                                              >  SRR4302540.4116361/1‑94 (MQ=60)

 CTGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGC                                                                                              <  SRR4302540.6232429/94‑1 (MQ=60)

  TGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCG                                                                                             <  SRR4302540.107401/94‑1 (MQ=60)

  TGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCG                                                                                             >  SRR4302540.1660683/1‑94 (MQ=60)

  TGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCG                                                                                             >  SRR4302540.4745146/1‑94 (MQ=60)

  TGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCG                                                                                             <  SRR4302540.9613464/94‑1 (MQ=60)

  TGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCG                                                                                             >  SRR4302540.6617465/1‑94 (MQ=60)

  TGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCG                                                                                             <  SRR4302540.6470583/94‑1 (MQ=60)

   GGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGC                                                                                            >  SRR4302540.7618330/1‑94 (MQ=60)

    GTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCT                                                                                           >  SRR4302540.681426/1‑94 (MQ=60)

    GTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCT                                                                                           >  SRR4302540.681427/1‑94 (MQ=60)

     TCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTC                                                                                          <  SRR4302540.7526557/94‑1 (MQ=60)

     TCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTC                                                                                          >  SRR4302540.5242512/1‑94 (MQ=60)

     TCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTC                                                                                          >  SRR4302540.1644255/1‑94 (MQ=60)

     TCTGTTCGCCAGCTAGAGCGGCAAA‑TGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCC                                                                                         <  SRR4302540.5442957/94‑1 (MQ=60)

     TCTGTNCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGNGGACACTACTGTNACNTGACAAATCAGCCATGCTGCAACAACGCGCTC                                                                                          >  SRR4302540.4805775/1‑94 (MQ=60)

     GCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTC                                                                                          <  SRR4302540.3542405/94‑1 (MQ=60)

      CTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCC                                                                                         <  SRR4302540.7192526/94‑1 (MQ=60)

      CTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCC                                                                                         <  SRR4302540.5767911/94‑1 (MQ=60)

      CTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCC                                                                                         <  SRR4302540.8219749/94‑1 (MQ=60)

      CTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCC                                                                                         <  SRR4302540.8885413/94‑1 (MQ=60)

      CTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCC                                                                                         >  SRR4302540.9579481/1‑94 (MQ=60)

       TGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCT                                                                                        >  SRR4302540.5687216/1‑94 (MQ=60)

       TGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCT                                                                                        <  SRR4302540.5421656/94‑1 (MQ=60)

       TGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCT                                                                                        <  SRR4302540.3954652/94‑1 (MQ=60)

       TGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCT                                                                                        <  SRR4302540.2487481/94‑1 (MQ=60)

       TGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCT                                                                                        >  SRR4302540.1332212/1‑94 (MQ=60)

       TGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCT                                                                                        <  SRR4302540.2240270/94‑1 (MQ=60)

       TGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCT                                                                                        >  SRR4302540.1127347/1‑94 (MQ=60)

       TGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACCGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCT                                                                                        >  SRR4302540.972197/1‑94 (MQ=60)

       TGTGCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCT                                                                                        <  SRR4302540.7158287/94‑1 (MQ=60)

        GTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGACCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTG                                                                                       >  SRR4302540.1852977/1‑94 (MQ=60)

           CGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCG                                                                                    <  SRR4302540.4581225/94‑1 (MQ=60)

           CGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCG                                                                                    >  SRR4302540.329061/1‑94 (MQ=60)

            GCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGA                                                                                   >  SRR4302540.2964655/1‑94 (MQ=60)

             CCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAG                                                                                  <  SRR4302540.8020388/94‑1 (MQ=60)

              CAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGA                                                                                 >  SRR4302540.944260/1‑94 (MQ=60)

              CAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGA                                                                                 >  SRR4302540.720752/1‑94 (MQ=60)

               AGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGAC                                                                                <  SRR4302540.376133/94‑1 (MQ=60)

               AGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGAC                                                                                >  SRR4302540.3730239/1‑94 (MQ=60)

               AGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGAC                                                                                >  SRR4302540.8953680/1‑94 (MQ=60)

               AGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGAC                                                                                >  SRR4302540.3808287/1‑94 (MQ=60)

               AGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGAC                                                                                >  SRR4302540.5628725/1‑94 (MQ=60)

               AGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCCGCAACAACGCGCTCCTGCCGAGAC                                                                                >  SRR4302540.5401125/1‑94 (MQ=60)

                GCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACG                                                                               >  SRR4302540.73769/1‑94 (MQ=60)

                  TAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCA                                                                             >  SRR4302540.7285182/1‑94 (MQ=60)

                  TAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCA                                                                             >  SRR4302540.1119640/1‑94 (MQ=60)

                  TAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCA                                                                             <  SRR4302540.901343/94‑1 (MQ=60)

                   AGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCAT                                                                            >  SRR4302540.3084509/1‑94 (MQ=60)

                   AGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCAT                                                                            <  SRR4302540.1639149/94‑1 (MQ=60)

                     AGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATAT                                                                          <  SRR4302540.232652/94‑1 (MQ=60)

                      GCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATT                                                                         >  SRR4302540.601966/1‑94 (MQ=60)

                      GCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATT                                                                         >  SRR4302540.2526898/1‑94 (MQ=60)

                       CGGCAAATTGCGACCGAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTC                                                                        <  SRR4302540.4848239/94‑1 (MQ=60)

                       CGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTC                                                                        <  SRR4302540.6940170/94‑1 (MQ=60)

                       CGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTC                                                                        <  SRR4302540.1236763/94‑1 (MQ=60)

                       CGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTC                                                                        <  SRR4302540.8552093/94‑1 (MQ=60)

                         GCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTT                                                                      <  SRR4302540.7221219/94‑1 (MQ=60)

                         GCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTT                                                                      >  SRR4302540.7997827/1‑94 (MQ=60)

                           AAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCC                                                                    <  SRR4302540.1183980/94‑1 (MQ=60)

                           AAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCC                                                                    >  SRR4302540.695102/1‑94 (MQ=60)

                           AAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCC                                                                    >  SRR4302540.5658643/1‑94 (MQ=60)

                            AATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCG                                                                   >  SRR4302540.1002271/1‑94 (MQ=60)

                            AATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCG                                                                   <  SRR4302540.4697053/94‑1 (MQ=60)

                            AATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCG                                                                   <  SRR4302540.6425568/94‑1 (MQ=60)

                            AATCGCGACCCAGTTTTATGAGCGGACCCTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCG                                                                   <  SRR4302540.2537581/94‑1 (MQ=60)

                               TGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAA                                                                >  SRR4302540.9030805/1‑94 (MQ=60)

                               TGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAA                                                                >  SRR4302540.9747648/1‑94 (MQ=60)

                                GCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAAC                                                               >  SRR4302540.4535583/1‑94 (MQ=60)

                                GCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTCCCGAGACGAATATTTTTCCTCAAC                                                               >  SRR4302540.8791154/1‑94 (MQ=60)

                                 CGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACA                                                              <  SRR4302540.5904982/94‑1 (MQ=60)

                                 CGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACA                                                              <  SRR4302540.7400859/94‑1 (MQ=60)

                                 CGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACA                                                              <  SRR4302540.8984323/94‑1 (MQ=60)

                                 CGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACA                                                              <  SRR4302540.4707984/94‑1 (MQ=60)

                                 CGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACA                                                              <  SRR4302540.9978802/94‑1 (MQ=60)

                                 CGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCACTCCTGCCGAGACGCATATTCTTCCGCAACA                                                              <  SRR4302540.5244183/94‑1 (MQ=60)

                                  GACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAG                                                             >  SRR4302540.6589113/1‑94 (MQ=60)

                                  GACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAG                                                             <  SRR4302540.5272575/94‑1 (MQ=60)

                                    CCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGC                                                           >  SRR4302540.8777501/1‑94 (MQ=60)

                                    CCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGC                                                           <  SRR4302540.7064666/94‑1 (MQ=60)

                                    CCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGA                                                           >  SRR4302540.9143915/1‑94 (MQ=60)

                                     CCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCG                                                          <  SRR4302540.4253701/94‑1 (MQ=60)

                                     CCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCG                                                          <  SRR4302540.8574787/94‑1 (MQ=60)

                                      CAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGA                                                         >  SRR4302540.1803832/1‑94 (MQ=60)

                                       AGTTTTATGGGCGGACAATACTGTCACATGACAAATCAGCCATGCTGCACCAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGAT                                                        <  SRR4302540.8601096/94‑1 (MQ=60)

                                       AGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGAT                                                        <  SRR4302540.8601097/94‑1 (MQ=60)

                                        GTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATA                                                       >  SRR4302540.3487594/1‑94 (MQ=60)

                                        GTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATA                                                       >  SRR4302540.5981119/1‑94 (MQ=60)

                                         TTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATAC                                                      <  SRR4302540.2481920/94‑1 (MQ=60)

                                         TTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATAC                                                      <  SRR4302540.4362968/94‑1 (MQ=60)

                                          TTTATGAGGGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACG                                                     <  SRR4302540.229696/94‑1 (MQ=60)

                                          TTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACG                                                     >  SRR4302540.4402814/1‑94 (MQ=60)

                                          TTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACG                                                     <  SRR4302540.8074152/94‑1 (MQ=60)

                                          TTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACG                                                     <  SRR4302540.5712191/94‑1 (MQ=60)

                                           TTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGC                                                    >  SRR4302540.708784/1‑94 (MQ=60)

                                           TTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGC                                                    >  SRR4302540.6889339/1‑94 (MQ=60)

                                              TGAGCGGACACTCCTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGAT                                                 <  SRR4302540.8561201/94‑1 (MQ=60)

                                                AGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCC                                               <  SRR4302540.4018618/94‑1 (MQ=60)

                                                 GCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCC                                              <  SRR4302540.3058689/94‑1 (MQ=60)

                                                  CGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCT                                             >  SRR4302540.3982606/1‑94 (MQ=60)

                                                  CGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCT                                             >  SRR4302540.4392711/1‑94 (MQ=60)

                                                   GGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCCTATTCTTCCGCAACAGGCGATACGCGATCCCTT                                            >  SRR4302540.9804206/1‑94 (MQ=60)

                                                   GGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTT                                            <  SRR4302540.3757769/94‑1 (MQ=60)

                                                   GGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTT                                            >  SRR4302540.8503673/1‑94 (MQ=60)

                                                   GGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTT                                            >  SRR4302540.8029757/1‑94 (MQ=60)

                                                   GGACACTACTGTCACATGACAAACCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTT                                            <  SRR4302540.5835848/94‑1 (MQ=60)

                                                    GACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGCCGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTT                                           <  SRR4302540.1577274/94‑1 (MQ=60)

                                                     ACATTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTG                                          <  SRR4302540.6396044/94‑1 (MQ=60)

                                                     ACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTG                                          <  SRR4302540.7173224/94‑1 (MQ=60)

                                                     ACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTG                                          <  SRR4302540.314527/94‑1 (MQ=60)

                                                      CACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGT                                         <  SRR4302540.1425104/94‑1 (MQ=60)

                                                      CACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGT                                         <  SRR4302540.4132276/94‑1 (MQ=60)

                                                       ACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTG                                        >  SRR4302540.1296157/1‑94 (MQ=60)

                                                       ACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTG                                        <  SRR4302540.3352635/94‑1 (MQ=60)

                                                       ACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTG                                        >  SRR4302540.4570922/1‑94 (MQ=60)

                                                         TACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCT                                      >  SRR4302540.3021382/1‑94 (MQ=60)

                                                         TACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCT                                      >  SRR4302540.8323928/1‑94 (MQ=60)

                                                         TACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCT                                      >  SRR4302540.1742908/1‑94 (MQ=60)

                                                         TACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCT                                      >  SRR4302540.8593768/1‑94 (MQ=60)

                                                          ACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTC                                     >  SRR4302540.827693/1‑94 (MQ=60)

                                                           CTGTCACATGACAAATCAGCCATGCTGCAACACCGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCG                                    <  SRR4302540.9310543/94‑1 (MQ=60)

                                                           CTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCG                                    <  SRR4302540.7586841/94‑1 (MQ=60)

                                                           CTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCG                                    >  SRR4302540.8895216/1‑94 (MQ=60)

                                                           CTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCG                                    <  SRR4302540.7586842/94‑1 (MQ=60)

                                                            TGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGA                                   >  SRR4302540.5117706/1‑94 (MQ=60)

                                                            TGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGA                                   <  SRR4302540.4355255/94‑1 (MQ=60)

                                                            TGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGA                                   >  SRR4302540.1026070/1‑94 (MQ=60)

                                                             GTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAT                                  >  SRR4302540.2592534/1‑94 (MQ=60)

                                                             GTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAA                                  >  SRR4302540.4911975/1‑94 (MQ=60)

                                                              TCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAAT                                 <  SRR4302540.6581171/94‑1 (MQ=60)

                                                              TCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAAT                                 >  SRR4302540.1788220/1‑94 (MQ=60)

                                                               CACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTTCTCGAATT                                >  SRR4302540.1459900/1‑94 (MQ=60)

                                                               CACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATT                                <  SRR4302540.2067898/94‑1 (MQ=60)

                                                               CACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATT                                <  SRR4302540.7725502/94‑1 (MQ=60)

                                                               CACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATT                                >  SRR4302540.6620207/1‑94 (MQ=60)

                                                               CACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATT                                >  SRR4302540.8089659/1‑94 (MQ=60)

                                                                ccaggcCAAATCAGCCCTGCTGCAACAACGCGCGCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTT                               <  SRR4302540.5109869/88‑1 (MQ=60)

                                                                caagGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTT                               <  SRR4302540.5110149/90‑1 (MQ=60)

                                                                ACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTT                               >  SRR4302540.2575850/1‑94 (MQ=60)

                                                                 CATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTC                              >  SRR4302540.1618907/1‑94 (MQ=60)

                                                                  ATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCT                             <  SRR4302540.4455091/94‑1 (MQ=60)

                                                                  ATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCT                             >  SRR4302540.8297153/1‑94 (MQ=60)

                                                                  ATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCT                             >  SRR4302540.7813279/1‑94 (MQ=60)

                                                                  ATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCT                             >  SRR4302540.518541/1‑94 (MQ=60)

                                                                   TGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTG                            <  SRR4302540.5457748/94‑1 (MQ=60)

                                                                    GACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGG                           >  SRR4302540.2846224/1‑94 (MQ=60)

                                                                    GACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGG                           >  SRR4302540.9224194/1‑94 (MQ=60)

                                                                     ACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGA                          >  SRR4302540.1161846/1‑94 (MQ=60)

                                                                     ACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGA                          <  SRR4302540.8259429/94‑1 (MQ=60)

                                                                      CAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAA                         <  SRR4302540.3260367/94‑1 (MQ=60)

                                                                      CAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAA                         >  SRR4302540.7826113/1‑94 (MQ=60)

                                                                       AAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACATGAGATAGGCGATCCCTTTGTGCTCGAATTTCTGGAAT                        >  SRR4302540.3579320/1‑94 (MQ=60)

                                                                       AAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAAT                        >  SRR4302540.4510702/1‑94 (MQ=60)

                                                                        AATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATT                       <  SRR4302540.5747393/94‑1 (MQ=60)

                                                                         ATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGACTTTCTGGACTTG                      >  SRR4302540.7142048/1‑94 (MQ=60)

                                                                          TCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGA                     <  SRR4302540.7619047/94‑1 (MQ=60)

                                                                           CAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAA                    <  SRR4302540.1295397/94‑1 (MQ=60)

                                                                           CAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCAATCCCTTTGTGCTCGAATTTCTGGAATTGAA                    <  SRR4302540.6362548/94‑1 (MQ=60)

                                                                             GCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAG                  <  SRR4302540.2958414/94‑1 (MQ=60)

                                                                              CCATGCTGCAACACCGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGTCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGA                 <  SRR4302540.9968450/94‑1 (MQ=60)

                                                                              CCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGA                 <  SRR4302540.10075279/94‑1 (MQ=60)

                                                                              CCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGA                 >  SRR4302540.6470491/1‑94 (MQ=60)

                                                                              CCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGA                 >  SRR4302540.3163289/1‑94 (MQ=60)

                                                                              CCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGA                 <  SRR4302540.2961208/94‑1 (MQ=60)

                                                                               cgtgttgccACAACGCGCTCCTGGCGAGACCCATCTTCTGCCGCAACAGGCGATCCGCGATCCCTTTGTCCTCGAATTTCTGGAATTGAAAGAT                <  SRR4302540.6461022/85‑1 (MQ=60)

                                                                               CATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTTTGGAATTGAAAGTT                >  SRR4302540.3062010/1‑94 (MQ=60)

                                                                               CATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGAT                >  SRR4302540.8089333/1‑94 (MQ=60)

                                                                               CATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGAT                <  SRR4302540.145739/94‑1 (MQ=60)

                                                                               CATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGAT                >  SRR4302540.1265072/1‑94 (MQ=60)

                                                                                ATGCTGCAACACCGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATG               <  SRR4302540.3819150/94‑1 (MQ=60)

                                                                                ATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATG               >  SRR4302540.3953693/1‑94 (MQ=60)

                                                                                ATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATG               >  SRR4302540.2889222/1‑94 (MQ=60)

                                                                                ATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATG               >  SRR4302540.1730124/1‑94 (MQ=60)

                                                                                ATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATG               >  SRR4302540.10144448/1‑94 (MQ=60)

                                                                                ATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGACGATACGCGATACCTTTGTGCTCGAATTTCTGGAATTGCAAGATG               >  SRR4302540.2889223/1‑94 (MQ=60)

                                                                                 TGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGA              >  SRR4302540.726123/1‑94 (MQ=60)

                                                                                  GCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAA             <  SRR4302540.3785937/94‑1 (MQ=60)

                                                                                  GCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAA             <  SRR4302540.6081205/94‑1 (MQ=60)

                                                                                   CAGCAACACCGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAAT            <  SRR4302540.5344632/94‑1 (MQ=60)

                                                                                    TGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATA           >  SRR4302540.7628351/1‑94 (MQ=60)

                                                                                     GCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATAT          >  SRR4302540.9741545/1‑94 (MQ=60)

                                                                                     GCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATAT          <  SRR4302540.5005294/94‑1 (MQ=60)

                                                                                       AACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTC        >  SRR4302540.9313202/1‑94 (MQ=60)

                                                                                       AACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTC        >  SRR4302540.4714235/1‑94 (MQ=60)

                                                                                        ACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTCA       <  SRR4302540.8631076/94‑1 (MQ=60)

                                                                                        ACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTCA       <  SRR4302540.8631075/94‑1 (MQ=60)

                                                                                        ACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTCA       <  SRR4302540.2903820/94‑1 (MQ=60)

                                                                                         CAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTCAG      <  SRR4302540.3793880/94‑1 (MQ=60)

                                                                                         CAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTCAG      >  SRR4302540.8821410/1‑94 (MQ=60)

                                                                                         CAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTCAG      <  SRR4302540.3890126/94‑1 (MQ=60)

                                                                                         CAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTAAG      >  SRR4302540.4197984/1‑94 (MQ=60)

                                                                                          AACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTTAGA     <  SRR4302540.7486146/94‑1 (MQ=60)

                                                                                           ACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTCAGAA    <  SRR4302540.1463891/94‑1 (MQ=60)

                                                                                           ACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTCAGAA    <  SRR4302540.6009563/94‑1 (MQ=60)

                                                                                            CGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTCAGAAT   >  SRR4302540.6461804/1‑94 (MQ=60)

GCTGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACACGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTCAGAATC  >  NC_000913/3365961‑3366147

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`