Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,367,240	T→C	Y249C (TAT→TGT)	yhcI ←	putative NAGC‑like transcriptional regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,367,240	0	T	C	99.7%	1077.0 / NA	339	Y249C (TAT→TGT)	yhcI	putative NAGC‑like transcriptional regulator
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (133/205); minor base G (1/0); total (134/205)
Fisher's exact test for biased strand distribution p-value = 3.95e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 353 total aligned reads displayed.

AAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGATACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTA  >  NC_000913/3367150‑3367329

aaaCCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGacac                                                                                         >  1:8756399/1‑93 (MQ=255)

 aaCCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACAcc                                                                                        >  1:5954356/1‑93 (MQ=255)

  aCCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACAccc                                                                                       <  2:3218859/93‑1 (MQ=255)

  aCCTGCAACATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACAccc                                                                                       <  2:8850241/93‑1 (MQ=255)

    cTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCtt                                                                                     >  2:8425719/1‑93 (MQ=255)

     tGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTc                                                                                    <  2:3402514/93‑1 (MQ=255)

       catcatGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTg                                                                                  >  1:8547339/1‑93 (MQ=255)

       catcatGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTg                                                                                  >  1:7240078/1‑93 (MQ=255)

        atcatGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGc                                                                                 >  2:201503/1‑93 (MQ=255)

         tcatGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGcc                                                                                >  1:7950744/1‑93 (MQ=255)

           atGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAg                                                                              >  2:2846774/1‑93 (MQ=255)

            tGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGa                                                                             >  1:9163901/1‑93 (MQ=255)

               cGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCa                                                                          >  1:3463073/1‑93 (MQ=255)

                ggTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCaa                                                                         <  1:3663673/93‑1 (MQ=255)

                 gTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAAc                                                                        >  1:3016286/1‑93 (MQ=255)

                 gTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAAc                                                                        <  2:7444818/93‑1 (MQ=255)

                   aaTGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGc                                                                      <  1:739809/93‑1 (MQ=255)

                    aTGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCt                                                                     <  1:5024385/93‑1 (MQ=255)

                    aTGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGACAGACCAACGCt                                                                     >  1:2110945/1‑93 (MQ=255)

                     tGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTg                                                                    <  1:781144/93‑1 (MQ=255)

                      gcgcCGCCAGTAAATCAACATGAAATGCCGCTGTCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGc                                                                   <  2:6152385/93‑1 (MQ=255)

                      gcgcCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGc                                                                   >  2:4093837/1‑93 (MQ=255)

                      gccccgccAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGc                                                                   <  2:3435542/90‑1 (MQ=255)

                       cgccgcCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGcc                                                                  <  2:7847797/93‑1 (MQ=255)

                         ccgccAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCAc                                                                <  2:1062127/93‑1 (MQ=255)

                          cgccAGTAAGACAGCATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCGCCAGCGCCAGACACCCCTCTGGCAGTCCACCGCTGCCAcc                                                               <  2:454817/93‑1 (MQ=255)

                            ccAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCgc                                                             >  2:2079838/1‑92 (MQ=255)

                            ccAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGa                                                             <  2:1330119/93‑1 (MQ=255)

                            ccAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGa                                                             >  2:8110475/1‑93 (MQ=255)

                            ccAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGa                                                             <  1:9624616/93‑1 (MQ=255)

                             cAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGac                                                            <  1:1453587/93‑1 (MQ=255)

                              aGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGacc                                                           <  2:5542277/93‑1 (MQ=255)

                              aGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGacc                                                           >  1:4481718/1‑93 (MQ=255)

                                tAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGaccac                                                         >  2:7160893/1‑93 (MQ=255)

                                 aaaTCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGaccacc                                                        >  2:5697133/1‑93 (MQ=255)

                                   aTCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACcaccac                                                      >  2:9210568/1‑93 (MQ=255)

                                   aTCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACcaccac                                                      <  2:7659794/93‑1 (MQ=255)

                                     cAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGc                                                    <  1:5623658/93‑1 (MQ=255)

                                      aaCATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCATGCa                                                   <  2:9838964/93‑1 (MQ=255)

                                      aaCATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCa                                                   <  1:1129107/93‑1 (MQ=255)

                                      aaCATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCa                                                   <  2:6818552/93‑1 (MQ=255)

                                      aaCATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCa                                                   >  2:7238113/1‑93 (MQ=255)

                                      aaCATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCa                                                   <  2:1627134/93‑1 (MQ=255)

                                       aCATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCAc                                                  <  1:5799322/93‑1 (MQ=255)

                                        cATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACt                                                 <  1:6543841/93‑1 (MQ=255)

                                        cATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACt                                                 >  1:5265391/1‑93 (MQ=255)

                                         aTGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTg                                                <  2:5274203/93‑1 (MQ=255)

                                         aTGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTg                                                >  2:6974901/1‑93 (MQ=255)

                                         aTGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTg                                                <  1:9917739/93‑1 (MQ=255)

                                          tGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTgg                                               >  2:3727893/1‑93 (MQ=255)

                                          tGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTgg                                               <  2:8751368/93‑1 (MQ=255)

                                          tGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTgg                                               <  2:3161853/93‑1 (MQ=255)

                                          tGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTgg                                               >  1:9798514/1‑93 (MQ=255)

                                          tGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTgg                                               >  1:933940/1‑93 (MQ=255)

                                           gAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGc                                              <  2:3030529/93‑1 (MQ=255)

                                             aaTGCCGCTTGCTCCTGGGCCAGATACGTTTCCCCCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCaa                                            <  1:2311748/93‑1 (MQ=255)

                                              aTGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAAt                                           <  2:3868617/93‑1 (MQ=255)

                                                gCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCa                                         <  2:9425546/93‑1 (MQ=255)

                                                 ccGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAg                                        <  1:2817149/93‑1 (MQ=255)

                                                  cGCTGGCCCCCGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCTCCTCGCACTGGCAATCAGt                                       <  2:2681788/93‑1 (MQ=255)

                                                   gCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGtt                                      <  1:7150985/93‑1 (MQ=255)

                                                   gCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGtt                                      >  2:4721290/1‑93 (MQ=255)

                                                    cTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTtg                                     >  2:5388480/1‑93 (MQ=255)

                                                     tGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTtgt                                    <  2:1182794/93‑1 (MQ=255)

                                                     tGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACAAACGCTGCCACCCACCACCAAGCACTGGCAATCAGTtgg                                    >  1:8254384/1‑92 (MQ=255)

                                                     tGGCTCCTGCGCCAGATACGTTTCAACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTtgt                                    >  1:7484951/1‑93 (MQ=255)

                                                     tGGCTCCTGCCCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTtgt                                    <  1:4272977/93‑1 (MQ=255)

                                                           cTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCttt                              >  1:4849385/1‑93 (MQ=255)

                                                            tGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTa                             >  2:3639727/1‑93 (MQ=255)

                                                            cgcgtCAGATGCGTTTCCACCAGCGGCGGACCCCCTTCTGCCCGCCCAACGCTGCCACCGACCAACCCGCTCTGGCCATCAGTTGTGGCTTTa                             <  1:4044907/92‑1 (MQ=255)

                                                             gcgcCAGATACGTTTCCACCAGAGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTaa                            <  1:3798382/93‑1 (MQ=255)

                                                              cgcCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAat                           <  2:4276944/93‑1 (MQ=255)

                                                                ccAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAatat                         <  2:6617204/93‑1 (MQ=255)

                                                                 cAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATc                        <  1:1071925/93‑1 (MQ=255)

                                                                 cAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATc                        <  2:4928422/93‑1 (MQ=255)

                                                                  aGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCa                       <  2:5116106/93‑1 (MQ=255)

                                                                   gATTCGTTTCCACCAGCGCCAGACTCCCTTCTGCGAGACCAACGCTGCCACCGGCCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAg                      <  1:3323718/93‑1 (MQ=255)

                                                                   gATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAg                      >  1:8652836/1‑93 (MQ=255)

                                                                    aTACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGc                     <  2:2456938/93‑1 (MQ=255)

                                                                     tACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCg                    >  1:8510879/1‑93 (MQ=255)

                                                                      aCGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGa                   <  2:8228757/93‑1 (MQ=255)

                                                                        gTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATc                 >  2:1738702/1‑93 (MQ=255)

                                                                        gTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATc                 <  1:3957478/93‑1 (MQ=255)

                                                                         tttCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCa                >  1:222953/1‑93 (MQ=255)

                                                                         tttCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGCTGTGGCTTTAATATCAGCGATCa                >  2:1041788/1‑93 (MQ=255)

                                                                         attCCCCCAGCGCCAGCCACCCTTCTACCAGACCAACACTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCa                <  1:8921067/92‑1 (MQ=255)

                                                                          ttCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAg               >  1:260532/1‑93 (MQ=255)

                                                                             caccaGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCt            <  1:247191/93‑1 (MQ=255)

                                                                              accaGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCtt           <  2:636140/93‑1 (MQ=255)

                                                                               ccaGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTg          <  2:1221249/93‑1 (MQ=255)

                                                                                  gcgcCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCCGCCTTGCaa       >  1:6852809/1‑93 (MQ=255)

                                                                                  gcgcCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCaa       <  1:6818638/93‑1 (MQ=255)

                                                                                  gcgcCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCaa       <  2:9700670/93‑1 (MQ=255)

                                                                                  gcgcCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTGTAATATCAGCGATCAGCCTTGCaa       <  1:6248768/93‑1 (MQ=255)

                                                                                   cgcCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAg      <  1:5991378/93‑1 (MQ=255)

                                                                                   cgcCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAg      <  2:3987525/93‑1 (MQ=255)

                                                                                    gcCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGc     <  2:9094097/93‑1 (MQ=255)

                                                                                    gcCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGc     >  2:4398824/1‑93 (MQ=255)

                                                                                    gcCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGc     >  2:2168587/1‑93 (MQ=255)

                                                                                       aGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTa  >  2:193788/1‑93 (MQ=255)

AAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGATACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTA  >  NC_000913/3367150‑3367329

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

AGTAAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGATACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTACGT  >  NC_000913/3367147‑3367332

AGTAAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGAC                                                                                              <  SRR4302540.4518766/94‑1 (MQ=60)

AGTAAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGAC                                                                                              <  SRR4302540.3423220/94‑1 (MQ=60)

 GTAAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACA                                                                                             <  SRR4302540.9878035/94‑1 (MQ=60)

 GTAAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACA                                                                                             >  SRR4302540.3828040/1‑94 (MQ=60)

  TAACCCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACAC                                                                                            <  SRR4302540.1197043/94‑1 (MQ=60)

  TAAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACAC                                                                                            >  SRR4302540.8857962/1‑94 (MQ=60)

  TAAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACAC                                                                                            >  SRR4302540.8740442/1‑94 (MQ=60)

  TAAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACAC                                                                                            <  SRR4302540.10057627/94‑1 (MQ=60)

   AAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACC                                                                                           >  SRR4302540.6020210/1‑94 (MQ=60)

   AAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACC                                                                                           <  SRR4302540.8800859/94‑1 (MQ=60)

    AACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCC                                                                                          <  SRR4302540.2423997/94‑1 (MQ=60)

     ACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCT                                                                                         >  SRR4302540.7519387/1‑94 (MQ=60)

      CCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTT                                                                                        <  SRR4302540.1132926/94‑1 (MQ=60)

       CTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTC                                                                                       <  SRR4302540.4492857/94‑1 (MQ=60)

        TGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCT                                                                                      <  SRR4302540.6041823/94‑1 (MQ=60)

        TGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCT                                                                                      <  SRR4302540.2246502/94‑1 (MQ=60)

         GCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTG                                                                                     >  SRR4302540.7320833/1‑94 (MQ=60)

         GCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTG                                                                                     >  SRR4302540.8646637/1‑94 (MQ=60)

         GCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTG                                                                                     <  SRR4302540.6129451/94‑1 (MQ=60)

          CATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGC                                                                                    >  SRR4302540.8227400/1‑94 (MQ=60)

          CATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGC                                                                                    >  SRR4302540.113649/1‑94 (MQ=60)

           ATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCC                                                                                   >  SRR4302540.8043427/1‑94 (MQ=60)

           ATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCC                                                                                   >  SRR4302540.7438564/1‑94 (MQ=60)

           ATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCC                                                                                   >  SRR4302540.2562108/1‑94 (MQ=60)

           ATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCC                                                                                   >  SRR4302540.1274103/1‑94 (MQ=60)

            TCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCA                                                                                  <  SRR4302540.3075545/94‑1 (MQ=60)

             CATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAG                                                                                 <  SRR4302540.4821750/94‑1 (MQ=60)

              ATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCCGA                                                                                >  SRR4302540.9684155/1‑94 (MQ=60)

              ATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGA                                                                                >  SRR4302540.9273866/1‑94 (MQ=60)

               TGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGAC                                                                               >  SRR4302540.3670881/1‑94 (MQ=60)

                 GCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCA                                                                             >  SRR4302540.3500772/1‑94 (MQ=60)

                  CGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAA                                                                            >  SRR4302540.4151249/1‑94 (MQ=60)

                   GGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCTCCAGACACCCTTCTGCCAGACCAAC                                                                           <  SRR4302540.3703768/94‑1 (MQ=60)

                   GGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAAC                                                                           >  SRR4302540.4057967/1‑94 (MQ=60)

                   GGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAAC                                                                           <  SRR4302540.3870762/94‑1 (MQ=60)

                   GGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAAC                                                                           <  SRR4302540.3703769/94‑1 (MQ=60)

                   GGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAAC                                                                           >  SRR4302540.3049445/1‑94 (MQ=60)

                   GGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAAC                                                                           >  SRR4302540.2871545/1‑94 (MQ=60)

                   GGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAAC                                                                           <  SRR4302540.8716154/94‑1 (MQ=60)

                      AATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCT                                                                        <  SRR4302540.6916901/94‑1 (MQ=60)

                      AATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCT                                                                        >  SRR4302540.2136435/1‑94 (MQ=60)

                      AATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCT                                                                        <  SRR4302540.232771/94‑1 (MQ=60)

                      AATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCT                                                                        <  SRR4302540.747706/94‑1 (MQ=60)

                      AATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCT                                                                        <  SRR4302540.10087664/94‑1 (MQ=60)

                      AATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCT                                                                        <  SRR4302540.5847321/94‑1 (MQ=60)

                      AATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGACAGACCAACGCT                                                                        >  SRR4302540.2133599/1‑94 (MQ=60)

                      AATGCACCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCT                                                                        <  SRR4302540.1195450/94‑1 (MQ=60)

                       ATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTG                                                                       <  SRR4302540.5078770/94‑1 (MQ=60)

                       ATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTG                                                                       <  SRR4302540.751658/94‑1 (MQ=60)

                       ATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTG                                                                       <  SRR4302540.4503462/94‑1 (MQ=60)

                       ATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTG                                                                       >  SRR4302540.5496579/1‑94 (MQ=60)

                       ATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTG                                                                       <  SRR4302540.7443434/94‑1 (MQ=60)

                       ATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTG                                                                       >  SRR4302540.7284778/1‑94 (MQ=60)

                        TGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGC                                                                      >  SRR4302540.7674951/1‑94 (MQ=60)

                        TGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGC                                                                      <  SRR4302540.789465/94‑1 (MQ=60)

                         GCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCC                                                                     <  SRR4302540.25949/94‑1 (MQ=60)

                             CGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCG                                                                 <  SRR4302540.5825575/94‑1 (MQ=60)

                             CGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCG                                                                 <  SRR4302540.7982827/94‑1 (MQ=60)

                              gccagtaaatgtacctgaaagtgggctcgctccgtgGCCAGATGCGTTTCCCCCAGCGCCAGACGCCCTTCTGGCAGACCAACGCTGCCACCGA                                                                <  SRR4302540.7462487/58‑1 (MQ=32)

                              GCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGA                                                                <  SRR4302540.7462489/94‑1 (MQ=60)

                               CCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGAC                                                               <  SRR4302540.9738050/94‑1 (MQ=60)

                                CAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACC                                                              <  SRR4302540.1469398/94‑1 (MQ=60)

                                CAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACC                                                              >  SRR4302540.4530319/1‑94 (MQ=60)

                                 AGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCA                                                             >  SRR4302540.3182038/1‑94 (MQ=60)

                                   TAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACC                                                           >  SRR4302540.6121035/1‑94 (MQ=60)

                                   TAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACC                                                           <  SRR4302540.2068847/94‑1 (MQ=60)

                                    AAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCA                                                          <  SRR4302540.3381735/94‑1 (MQ=60)

                                      ATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGAGACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACC                                                        >  SRR4302540.8618255/1‑94 (MQ=60)

                                      ATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACG                                                        >  SRR4302540.8618254/1‑94 (MQ=60)

                                      ATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAAACCAACACTGCCACCAACCACCACC                                                        >  SRR4302540.9438030/1‑94 (MQ=60)

                                       TCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGC                                                       <  SRR4302540.5059863/94‑1 (MQ=60)

                                        CAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCA                                                      <  SRR4302540.5685544/94‑1 (MQ=60)

                                        CAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCA                                                      <  SRR4302540.719598/94‑1 (MQ=60)

                                         AACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCAC                                                     <  SRR4302540.3259258/94‑1 (MQ=60)

                                         AACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCAC                                                     >  SRR4302540.2314945/1‑94 (MQ=60)

                                         AACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCAC                                                     <  SRR4302540.1140857/94‑1 (MQ=60)

                                          ACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACT                                                    <  SRR4302540.397402/94‑1 (MQ=60)

                                          ACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACT                                                    >  SRR4302540.4981547/1‑94 (MQ=60)

                                          ACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACT                                                    <  SRR4302540.9238829/94‑1 (MQ=60)

                                          ACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACT                                                    <  SRR4302540.5863402/94‑1 (MQ=60)

                                          ACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACT                                                    >  SRR4302540.5322854/1‑94 (MQ=60)

                                           CATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTG                                                   <  SRR4302540.6616453/94‑1 (MQ=60)

                                            ATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGG                                                  >  SRR4302540.8597912/1‑94 (MQ=60)

                                            ATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGG                                                  >  SRR4302540.943737/1‑94 (MQ=60)

                                            ATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGG                                                  >  SRR4302540.9913258/1‑94 (MQ=60)

                                            ATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGG                                                  <  SRR4302540.10033560/94‑1 (MQ=60)

                                            ATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGG                                                  >  SRR4302540.4152858/1‑94 (MQ=60)

                                            ATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGC                                                  >  SRR4302540.8821999/1‑94 (MQ=60)

                                             TGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCGCTGGC                                                 >  SRR4302540.4687355/1‑94 (MQ=60)

                                             TGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGC                                                 <  SRR4302540.9444448/94‑1 (MQ=60)

                                               AAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAA                                               <  SRR4302540.8682235/94‑1 (MQ=60)

                                                AATGCCGCTTGCTCCTGGGCCAGATACGTTTCCCCCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAAT                                              <  SRR4302540.2336630/94‑1 (MQ=60)

                                                AATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAAT                                              >  SRR4302540.2487090/1‑94 (MQ=60)

                                                AATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAAT                                              <  SRR4302540.2336631/94‑1 (MQ=60)

                                                 ATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATC                                             <  SRR4302540.9237615/94‑1 (MQ=60)

                                                  TGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCA                                            <  SRR4302540.9982531/94‑1 (MQ=60)

                                                  TGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCA                                            <  SRR4302540.9822868/94‑1 (MQ=60)

                                                    CCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGT                                          <  SRR4302540.6841652/94‑1 (MQ=60)

                                                    CCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGT                                          <  SRR4302540.6661929/94‑1 (MQ=60)

                                                    CCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGT                                          >  SRR4302540.7744519/1‑94 (MQ=60)

                                                    CCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGT                                          <  SRR4302540.7287980/94‑1 (MQ=60)

                                                    CCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGT                                          <  SRR4302540.2847586/94‑1 (MQ=60)

                                                    CCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGT                                          <  SRR4302540.2847584/94‑1 (MQ=60)

                                                    CCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGT                                          <  SRR4302540.6330649/94‑1 (MQ=60)

                                                     CGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTT                                         >  SRR4302540.593767/1‑94 (MQ=60)

                                                     CGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTT                                         <  SRR4302540.6882239/94‑1 (MQ=60)

                                                     CGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTT                                         >  SRR4302540.7027576/1‑94 (MQ=60)

                                                      GCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTG                                        <  SRR4302540.7230674/94‑1 (MQ=60)

                                                      GCTGGCTCCTGCGCCAGATACGTTTACACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTG                                        >  SRR4302540.7636079/1‑94 (MQ=60)

                                                       CTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGT                                       <  SRR4302540.8315114/94‑1 (MQ=60)

                                                       CTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACAAACGCTGCCACCCACCACCAAGCACTGGCAATCAGTTGG                                       >  SRR4302540.8350323/1‑94 (MQ=60)

                                                       CTGGCTCCTGCGCCAGATACGTTTCAACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGT                                       >  SRR4302540.7568500/1‑94 (MQ=60)

                                                        TGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTG                                      >  SRR4302540.7910830/1‑94 (MQ=60)

                                                        TGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTG                                      <  SRR4302540.9714000/94‑1 (MQ=60)

                                                        TGGCTCCTGCCCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTG                                      <  SRR4302540.4319447/94‑1 (MQ=60)

                                                         GGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGG                                     <  SRR4302540.5437469/94‑1 (MQ=60)

                                                             CCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTT                                 >  SRR4302540.2673818/1‑94 (MQ=60)

                                                             CCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTT                                 >  SRR4302540.4901338/1‑94 (MQ=60)

                                                              CTGCGCCAGATACGGTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCCCCACGCACTGGCAATCAGTTGTGGCTTTA                                >  SRR4302540.5633072/1‑94 (MQ=60)

                                                               cgcgtCAGATGCGTTTCCACCAGCGGCGGACCCCCTTCTGCCCGCCCAACGCTGCCACCGACCAACCCGCTCTGGCCATCAGTTGTGGCTTTAA                               <  SRR4302540.4088515/89‑1 (MQ=24)

                                                               TGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAA                               <  SRR4302540.4088516/94‑1 (MQ=60)

                                                               TGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAA                               >  SRR4302540.5265137/1‑94 (MQ=60)

                                                               TGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAA                               <  SRR4302540.3772662/94‑1 (MQ=60)

                                                                GCGCCAGATACGTTTCCACCAGAGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAAT                              <  SRR4302540.3839766/94‑1 (MQ=60)

                                                                 GGCCAGATACGTATCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCTACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATA                             <  SRR4302540.8918807/94‑1 (MQ=60)

                                                                 CGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATA                             <  SRR4302540.8918808/94‑1 (MQ=60)

                                                                  GCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATAT                            >  SRR4302540.1669864/1‑94 (MQ=60)

                                                                  GCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATAT                            <  SRR4302540.3535378/94‑1 (MQ=60)

                                                                   CCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATC                           >  SRR4302540.56340/1‑94 (MQ=60)

                                                                    CAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCA                          <  SRR4302540.5050121/94‑1 (MQ=60)

                                                                    CAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCA                          <  SRR4302540.1082862/94‑1 (MQ=60)

                                                                     AGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAG                         <  SRR4302540.6924289/94‑1 (MQ=60)

                                                                     AGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAG                         >  SRR4302540.8753351/1‑94 (MQ=60)

                                                                     AGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAG                         <  SRR4302540.3383055/94‑1 (MQ=60)

                                                                      GATTCGTTTCCACCAGCGCCAGACTCCCTTCTGCGAGACCAACGCTGCCACCGGCCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGC                        <  SRR4302540.3360180/94‑1 (MQ=60)

                                                                      GATACGTTTCCACCAGCGCCAGATGCCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGC                        <  SRR4302540.8438705/94‑1 (MQ=60)

                                                                      GATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGC                        <  SRR4302540.10001765/94‑1 (MQ=60)

                                                                       ATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCG                       <  SRR4302540.4063324/94‑1 (MQ=60)

                                                                       ATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCG                       >  SRR4302540.8609788/1‑94 (MQ=60)

                                                                         ACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGAT                     >  SRR4302540.7168641/1‑94 (MQ=60)

                                                                          CGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATC                    <  SRR4302540.2926660/94‑1 (MQ=60)

                                                                           GTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCA                   <  SRR4302540.8599490/94‑1 (MQ=60)

                                                                           GTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCA                   >  SRR4302540.225111/1‑94 (MQ=60)

                                                                           GTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCA                   <  SRR4302540.4000172/94‑1 (MQ=60)

                                                                            TTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAG                  <  SRR4302540.9436538/94‑1 (MQ=60)

                                                                            TTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAG                  >  SRR4302540.263071/1‑94 (MQ=60)

                                                                            ATTCCCCCAGCGCCAGCCACCCTTCTACCAGACCAACACTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAG                  <  SRR4302540.9024472/94‑1 (MQ=60)

                                                                             TTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGC                 >  SRR4302540.10044725/1‑94 (MQ=60)

                                                                             TTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGC                 >  SRR4302540.794320/1‑94 (MQ=60)

                                                                              TCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCC                >  SRR4302540.5108034/1‑94 (MQ=60)

                                                                                CACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTT              <  SRR4302540.9879754/94‑1 (MQ=60)

                                                                                CACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTT              <  SRR4302540.249581/94‑1 (MQ=60)

                                                                                 CCCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTG             <  SRR4302540.2754398/94‑1 (MQ=60)

                                                                                 ACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTG             <  SRR4302540.3822805/94‑1 (MQ=60)

                                                                                  CCAGCGCCATACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGC            <  SRR4302540.6606037/94‑1 (MQ=60)

                                                                                  CCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGC            >  SRR4302540.4493121/1‑94 (MQ=60)

                                                                                    AGCGCCGGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAA          <  SRR4302540.2245783/94‑1 (MQ=60)

                                                                                    AGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCCGCCTTGCAA          >  SRR4302540.6928719/1‑94 (MQ=60)

                                                                                    AGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAA          <  SRR4302540.8894674/94‑1 (MQ=60)

                                                                                     GCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAG         <  SRR4302540.6894115/94‑1 (MQ=60)

                                                                                     GCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTGTAATATCAGCGATCAGCCTTGCAAG         <  SRR4302540.6318305/94‑1 (MQ=60)

                                                                                      CGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGC        <  SRR4302540.6057757/94‑1 (MQ=60)

                                                                                      CGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGC        <  SRR4302540.6057758/94‑1 (MQ=60)

                                                                                      CGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGC        <  SRR4302540.3983475/94‑1 (MQ=60)

                                                                                        CCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGT      >  SRR4302540.6008612/1‑94 (MQ=60)

                                                                                        CCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGT      <  SRR4302540.9823063/94‑1 (MQ=60)

                                                                                          AGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCCCGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTAC    <  SRR4302540.5866122/94‑1 (MQ=60)

                                                                                          AGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTAC    <  SRR4302540.1424347/94‑1 (MQ=60)

                                                                                          AGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGAGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTAC    <  SRR4302540.6314994/94‑1 (MQ=60)

                                                                                           GACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTACG   >  SRR4302540.6600009/1‑94 (MQ=60)

                                                                                           GACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTACG   >  SRR4302540.6800075/1‑94 (MQ=60)

                                                                                           GACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTACG   >  SRR4302540.3662469/1‑94 (MQ=60)

                                                                                            ACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTACGT  <  SRR4302540.4188863/94‑1 (MQ=60)

AGTAAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGATACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTACGT  >  NC_000913/3367147‑3367332

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`