Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,370,778	A→G	V145A (GTA→GCA)	nanA ←	N‑acetylneuraminate lyase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,370,778	0	A	G	99.7%	1212.9 / ‑5.1	380	V145A (GTA→GCA)	nanA	N‑acetylneuraminate lyase
Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (226/152); total (228/152)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.36e-01

Only 100 of 386 total aligned reads displayed.

TCCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTACCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCA  >  NC_000913/3370688‑3370867

tCCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGcc                                                                                         >  1:1225531/1‑93 (MQ=255)

tCCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGcc                                                                                         >  2:325660/1‑93 (MQ=255)

tCCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGcc                                                                                         >  1:6607447/1‑93 (MQ=255)

 ccATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGccc                                                                                        >  2:3691724/1‑93 (MQ=255)

  cATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGcccc                                                                                       <  1:6415094/93‑1 (MQ=255)

  cATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGAGTCAGTTTTGcccc                                                                                       >  1:187/1‑93 (MQ=255)

    tCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCAc                                                                                     >  1:7253092/1‑93 (MQ=255)

     cTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACt                                                                                    <  1:105037/93‑1 (MQ=255)

      tGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTc                                                                                   >  2:2777910/1‑93 (MQ=255)

      tGATAGAGATCGCCAGAGGCCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTc                                                                                   >  1:7779986/1‑93 (MQ=255)

       gATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCa                                                                                  >  2:2239959/1‑93 (MQ=255)

       gATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCa                                                                                  <  1:6364437/93‑1 (MQ=255)

         tAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAgg                                                                                >  1:5002827/1‑93 (MQ=255)

           gagaTCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGc                                                                              >  1:2036574/1‑93 (MQ=255)

            agaTCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCt                                                                             >  1:5496588/1‑93 (MQ=255)

             gaTCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTg                                                                            <  2:5873819/93‑1 (MQ=255)

             gaTCGCCAGAGGCCTGTTTCAACGCACTTACTCCATGCAATGTAAGAAGTGTGTTGATCTGATCCAGGGTCAGGTGTGCTCTACTCAGTGCTg                                                                            >  2:6459158/1‑93 (MQ=255)

               tCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGa                                                                          >  1:8774475/1‑93 (MQ=255)

                cGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGaa                                                                         <  1:240198/93‑1 (MQ=255)

                cGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGaa                                                                         <  1:8045066/93‑1 (MQ=255)

                 gCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAAt                                                                        >  1:9758501/1‑93 (MQ=255)

                 gCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAAt                                                                        >  1:940529/1‑93 (MQ=255)

                 gCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGCGCTGGAAt                                                                        >  2:7684843/1‑93 (MQ=255)

                  ccAGAGGTCTGTTTCAGCGCACCTACGCCAGGCACTGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCTACTCAGGGCTGGAAtg                                                                       >  1:5118849/1‑93 (MQ=255)

                  ccAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAAtg                                                                       >  1:6224372/1‑93 (MQ=255)

                     gagGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAAtgttg                                                                    >  1:3061107/1‑93 (MQ=255)

                        gTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTac                                                                 >  2:531985/1‑93 (MQ=255)

                         tCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTaca                                                                <  2:6650951/93‑1 (MQ=255)

                         tCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTaca                                                                >  1:8392966/1‑93 (MQ=255)

                          cTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTacac                                                               >  2:6322787/1‑93 (MQ=255)

                           tGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTAcacc                                                              >  2:10046557/1‑93 (MQ=255)

                            gTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTAcaccc                                                             >  2:2467472/1‑92 (MQ=255)

                             tttCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTAcaccac                                                            >  1:5662009/1‑93 (MQ=255)

                             tttCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTAcaccac                                                            >  1:4100653/1‑93 (MQ=255)

                             tttCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTAcaccac                                                            >  2:2922569/1‑93 (MQ=255)

                               tCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACAccacca                                                          <  2:1266057/93‑1 (MQ=255)

                               tCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACAccacca                                                          <  2:4231149/93‑1 (MQ=255)

                                cAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCAt                                                         >  1:337481/1‑93 (MQ=255)

                                 aGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATc                                                        >  1:3677412/1‑93 (MQ=255)

                                  gcgcACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCg                                                       >  2:1364191/1‑93 (MQ=255)

                                     cACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCa                                                    >  2:7214655/1‑93 (MQ=255)

                                     cACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCa                                                    >  2:5600878/1‑93 (MQ=255)

                                     cACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCa                                                    <  2:4088744/93‑1 (MQ=255)

                                       ccTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCaaa                                                  <  2:7368705/93‑1 (MQ=255)

                                       ccTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCaaa                                                  <  1:9534603/93‑1 (MQ=255)

                                         tACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAAcc                                                >  2:9693054/1‑93 (MQ=255)

                                          aCGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCa                                               >  1:5295336/1‑93 (MQ=255)

                                            gCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATc                                             <  1:3736872/93‑1 (MQ=255)

                                              cAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATccg                                           >  1:2473837/1‑93 (MQ=255)

                                                 gCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCAT‑GGCAAACCAAccgccca                                       >  1:1114668/1‑91 (MQ=255)

                                                   aaTGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGaa                                      >  1:594507/1‑93 (MQ=255)

                                                   aaTGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGaa                                      >  2:1523326/1‑93 (MQ=255)

                                                    aTGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAAt                                     >  2:9247665/1‑93 (MQ=255)

                                                     tGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATc                                    >  2:9504628/1‑93 (MQ=255)

                                                     tGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATc                                    >  1:273182/1‑93 (MQ=255)

                                                      gTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCa                                   >  2:2046336/1‑93 (MQ=255)

                                                       tAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCaa                                  <  1:4774522/93‑1 (MQ=255)

                                                        aaCAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCaat                                 <  1:3146402/93‑1 (MQ=255)

                                                         aCAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCaata                                <  1:7948906/93‑1 (MQ=255)

                                                         aCAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCaata                                <  2:1108771/93‑1 (MQ=255)

                                                          cAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCATTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCaataa                               <  2:6951664/93‑1 (MQ=255)

                                                          cAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCaataa                               <  2:3473807/93‑1 (MQ=255)

                                                           aaGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCaataat                              >  2:3316262/1‑93 (MQ=255)

                                                            aGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAAtt                             >  1:5810257/1‑93 (MQ=255)

                                                            aGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAAtt                             >  1:3966400/1‑93 (MQ=255)

                                                            aGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAAtt                             >  2:4426674/1‑93 (MQ=255)

                                                             gtgtgtTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTg                            >  1:4330980/1‑93 (MQ=255)

                                                             gtgtgtTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTg                            >  2:168361/1‑93 (MQ=255)

                                                              tgtgtTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGc                           >  1:9314858/1‑93 (MQ=255)

                                                              tgtgtTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGc                           >  1:897517/1‑93 (MQ=255)

                                                               gtgtTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGcc                          <  1:4237721/93‑1 (MQ=255)

                                                                   tgatctgatcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGAt                      <  2:2310872/93‑1 (MQ=255)

                                                                   tgatctgatcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGAt                      >  1:890372/1‑93 (MQ=255)

                                                                   tgatctgatcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGAt                      >  1:2836375/1‑93 (MQ=255)

                                                                    gatctgatcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATa                     <  1:755127/93‑1 (MQ=255)

                                                                    gatctgatcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATa                     >  2:2081009/1‑93 (MQ=255)

                                                                     atcttatcCAGGGTCAGTTTTGCCCCACGCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAg                    <  1:6821730/93‑1 (MQ=255)

                                                                      tctgatcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAgg                   >  1:3430923/1‑92 (MQ=255)

                                                                      tctgatcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGt                   >  1:1532414/1‑93 (MQ=255)

                                                                       ctgatcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTg                  <  2:9839678/93‑1 (MQ=255)

                                                                       ctgatcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTg                  <  1:2655856/93‑1 (MQ=255)

                                                                        tgatcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCACTAATTGCCCGATAGTGa                 <  2:7962294/93‑1 (MQ=255)

                                                                          atcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATc               <  1:7045771/93‑1 (MQ=255)

                                                                           tcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCg              >  2:1850097/1‑93 (MQ=255)

                                                                           tcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCg              >  1:8742779/1‑93 (MQ=255)

                                                                           tcCAGGGGCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCAAATCAATAATTGCCCGATAGAGATCg              >  2:2188621/1‑93 (MQ=255)

                                                                            ccAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGc             >  1:325951/1‑93 (MQ=255)

                                                                              aGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAg           <  2:4656488/93‑1 (MQ=255)

                                                                              aGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAg           <  2:2587284/93‑1 (MQ=255)

                                                                              aGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAg           >  2:8508706/1‑93 (MQ=255)

                                                                               gggTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAgt          <  2:9085124/93‑1 (MQ=255)

                                                                                 gTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAgtgt        >  1:1732723/1‑93 (MQ=255)

                                                                                 gTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAgtgt        <  1:9232426/93‑1 (MQ=255)

                                                                                  tCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAACCCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGtt       <  2:8832153/93‑1 (MQ=255)

                                                                                    aGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGttct     <  1:5478382/93‑1 (MQ=255)

                                                                                    aGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGttct     >  2:3162479/1‑93 (MQ=255)

                                                                                      ttttGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGttcttc   <  1:4438381/93‑1 (MQ=255)

                                                                                      ttttGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGttcttc   >  2:6167365/1‑93 (MQ=255)

                                                                                       tttGCCCCACTCAGGGCTGGAATGTTGTACCCCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCa  <  1:5424194/93‑1 (MQ=255)

                                                                                       tttGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCa  <  2:4954114/93‑1 (MQ=255)

TCCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTACCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCA  >  NC_000913/3370688‑3370867

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 224 total aligned reads displayed.

TGCTCCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTACCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCAAAG  >  NC_000913/3370685‑3370870

TGCTCCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTG                                                                                              >  SRR4302540.9478936/1‑94 (MQ=60)

TGCTCCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTG                                                                                              >  SRR4302540.9478938/1‑94 (MQ=60)

 GCTCCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGC                                                                                             <  SRR4302540.6030071/94‑1 (MQ=60)

  CTCCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCC                                                                                            >  SRR4302540.5872626/1‑94 (MQ=60)

  CTCCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCC                                                                                            >  SRR4302540.6680611/1‑94 (MQ=60)

  CTCCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCC                                                                                            >  SRR4302540.1238060/1‑94 (MQ=60)

  CTCCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCC                                                                                            >  SRR4302540.1087021/1‑94 (MQ=60)

    CCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCC                                                                                          <  SRR4302540.8873080/94‑1 (MQ=60)

    CCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGAGTCAGTTTTGCCCC                                                                                          >  SRR4302540.190/1‑94 (MQ=60)

     CATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCA                                                                                         <  SRR4302540.5707866/94‑1 (MQ=60)

     CATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCA                                                                                         <  SRR4302540.6486485/94‑1 (MQ=60)

     CATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCA                                                                                         <  SRR4302540.7275803/94‑1 (MQ=60)

     CATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCA                                                                                         >  SRR4302540.6966756/1‑94 (MQ=60)

      ATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCTCAC                                                                                        <  SRR4302540.5996796/94‑1 (MQ=60)

      ATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCAC                                                                                        >  SRR4302540.5390577/1‑94 (MQ=60)

      ATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCAC                                                                                        >  SRR4302540.7334034/1‑94 (MQ=60)

      ATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCAC                                                                                        >  SRR4302540.4291217/1‑94 (MQ=60)

      ATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCAC                                                                                        <  SRR4302540.4730555/94‑1 (MQ=60)

       TCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACT                                                                                       >  SRR4302540.3159583/1‑94 (MQ=60)

       TCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACT                                                                                       <  SRR4302540.9022229/94‑1 (MQ=60)

        CTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTC                                                                                      <  SRR4302540.106157/94‑1 (MQ=60)

        CTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTC                                                                                      <  SRR4302540.2917488/94‑1 (MQ=60)

        CTGATAGAGATCGCCAGAGGCCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTC                                                                                      >  SRR4302540.7870931/1‑94 (MQ=60)

         TGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCA                                                                                     >  SRR4302540.2745069/1‑94 (MQ=60)

          GATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAG                                                                                    <  SRR4302540.6482087/94‑1 (MQ=60)

          GATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAG                                                                                    <  SRR4302540.3438676/94‑1 (MQ=60)

          GATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAG                                                                                    <  SRR4302540.3294834/94‑1 (MQ=60)

          GATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAG                                                                                    <  SRR4302540.6435303/94‑1 (MQ=60)

           ATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGG                                                                                   >  SRR4302540.5057003/1‑94 (MQ=60)

           ATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGG                                                                                   <  SRR4302540.2943316/94‑1 (MQ=60)

            TAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGG                                                                                  >  SRR4302540.9630744/1‑94 (MQ=60)

             AGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGC                                                                                 >  SRR4302540.386078/1‑94 (MQ=60)

             AGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGC                                                                                 <  SRR4302540.9124470/94‑1 (MQ=60)

             AGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGC                                                                                 >  SRR4302540.2058532/1‑94 (MQ=60)

              GAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCT                                                                                >  SRR4302540.5557109/1‑94 (MQ=60)

              GAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCT                                                                                >  SRR4302540.979792/1‑94 (MQ=60)

                 ATCGCCAGCGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATATGATCCAGGGCAAGTTTTGCCCCACTCCGGGCTGGA                                                                             >  SRR4302540.645799/1‑94 (MQ=60)

                 ATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGA                                                                             <  SRR4302540.10102528/94‑1 (MQ=60)

                 ATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGA                                                                             >  SRR4302540.8876123/1‑94 (MQ=60)

                 ATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGA                                                                             >  SRR4302540.2775552/1‑94 (MQ=60)

                 ATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGA                                                                             >  SRR4302540.645798/1‑94 (MQ=60)

                  TCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAA                                                                            <  SRR4302540.323256/94‑1 (MQ=60)

                   CGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAAT                                                                           <  SRR4302540.8138535/94‑1 (MQ=60)

                   CGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAAT                                                                           >  SRR4302540.1355696/1‑94 (MQ=60)

                   CGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAAT                                                                           <  SRR4302540.4928756/94‑1 (MQ=60)

                   CGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAAT                                                                           <  SRR4302540.242523/94‑1 (MQ=60)

                    GCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCACTGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCTACTCAGGGCTGGAATG                                                                          >  SRR4302540.5174270/1‑94 (MQ=60)

                    GCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATG                                                                          >  SRR4302540.883911/1‑94 (MQ=60)

                    GCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATG                                                                          <  SRR4302540.9455337/94‑1 (MQ=60)

                     CCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGT                                                                         >  SRR4302540.206996/1‑94 (MQ=60)

                     CCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGT                                                                         >  SRR4302540.2577445/1‑94 (MQ=60)

                     CCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGT                                                                         >  SRR4302540.4457592/1‑94 (MQ=60)

                      CAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTT                                                                        >  SRR4302540.9185366/1‑94 (MQ=60)

                       AGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTG                                                                       >  SRR4302540.3094692/1‑94 (MQ=60)

                       AGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTG                                                                       >  SRR4302540.5629056/1‑94 (MQ=60)

                        GAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGT                                                                      >  SRR4302540.407936/1‑94 (MQ=60)

                         AGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTTATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTA                                                                     >  SRR4302540.8449349/1‑94 (MQ=60)

                         AGGTCTGTTTCAACGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTA                                                                     <  SRR4302540.3808398/94‑1 (MQ=60)

                          GGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCGCCACTCAGGGCTGGAATGTTGTAC                                                                    >  SRR4302540.100189/1‑94 (MQ=60)

                          GGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTAC                                                                    <  SRR4302540.7549789/94‑1 (MQ=60)

                          GGTATGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTAC                                                                    >  SRR4302540.6303535/1‑94 (MQ=60)

                           GTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGaagc                                                                   >  SRR4302540.1504747/1‑90 (MQ=60)

                           GTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACA                                                                   >  SRR4302540.8490366/1‑94 (MQ=60)

                           GTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACA                                                                   <  SRR4302540.9015869/94‑1 (MQ=60)

                           GTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACA                                                                   <  SRR4302540.3649526/94‑1 (MQ=60)

                           GTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACA                                                                   >  SRR4302540.5499905/1‑94 (MQ=60)

                           GTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACA                                                                   <  SRR4302540.6216375/94‑1 (MQ=60)

                             CTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACC                                                                 >  SRR4302540.4215098/1‑94 (MQ=60)

                             CTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGATTTGCCCCACTCAGGGCTGGAATGTTGTACACC                                                                 >  SRR4302540.9836919/1‑94 (MQ=60)

                              TGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCA                                                                <  SRR4302540.5316062/94‑1 (MQ=60)

                              TGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCA                                                                <  SRR4302540.6914628/94‑1 (MQ=60)

                               GTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCAC                                                               >  SRR4302540.5724356/1‑94 (MQ=60)

                                TTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACC                                                              <  SRR4302540.1981934/94‑1 (MQ=60)

                                TTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACC                                                              <  SRR4302540.4426612/94‑1 (MQ=60)

                                TTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACC                                                              <  SRR4302540.4488890/94‑1 (MQ=60)

                                GTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACC                                                              <  SRR4302540.7548201/94‑1 (MQ=60)

                                  TCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCAT                                                            >  SRR4302540.340884/1‑94 (MQ=60)

                                   CAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATC                                                           >  SRR4302540.3717613/1‑94 (MQ=60)

                                   CAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATC                                                           >  SRR4302540.884133/1‑94 (MQ=60)

                                   CAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATC                                                           >  SRR4302540.6349059/1‑94 (MQ=60)

                                    AGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCG                                                          <  SRR4302540.331446/94‑1 (MQ=60)

                                    AGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCG                                                          <  SRR4302540.2538876/94‑1 (MQ=60)

                                    AGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCG                                                          >  SRR4302540.1704700/1‑94 (MQ=60)

                                    AGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCG                                                          >  SRR4302540.5700551/1‑94 (MQ=60)

                                    AGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACAATCG                                                          <  SRR4302540.4238849/94‑1 (MQ=60)

                                       GCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCA                                                       >  SRR4302540.3260415/1‑94 (MQ=60)

                                        CACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCACCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAA                                                      >  SRR4302540.5124103/1‑94 (MQ=60)

                                          CCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAAC                                                    <  SRR4302540.9647474/94‑1 (MQ=60)

                                           CTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACC                                                   >  SRR4302540.5173066/1‑94 (MQ=60)

                                           CTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACC                                                   <  SRR4302540.5144041/94‑1 (MQ=60)

                                              CGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACGATCGGCAAACCATC                                                >  SRR4302540.1609316/1‑94 (MQ=60)

                                              CGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATC                                                >  SRR4302540.8165900/1‑94 (MQ=60)

                                              CGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATC                                                <  SRR4302540.2160432/94‑1 (MQ=60)

                                               GCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCC                                               <  SRR4302540.4806277/94‑1 (MQ=60)

                                               GCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCC                                               >  SRR4302540.8700913/1‑94 (MQ=60)

                                                CCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCG                                              >  SRR4302540.9376507/1‑94 (MQ=60)

                                                CCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCG                                              >  SRR4302540.1156912/1‑94 (MQ=60)

                                                CCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCG                                              >  SRR4302540.2500469/1‑94 (MQ=60)

                                                CCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCC                                              >  SRR4302540.278260/1‑94 (MQ=60)

                                                 CAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTACCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGC                                             >  SRR4302540.4289623/1‑94 (MQ=60)

                                                  AGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCTGCC                                            >  SRR4302540.3750606/1‑94 (MQ=60)

                                                  AGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCC                                            >  SRR4302540.9143959/1‑94 (MQ=60)

                                                  AGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCC                                            >  SRR4302540.5530001/1‑94 (MQ=60)

                                                  AGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCC                                            >  SRR4302540.3816799/1‑94 (MQ=60)

                                                   GGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCG                                           <  SRR4302540.9521970/94‑1 (MQ=60)

                                                   GGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCAT‑GGCAAACCAACCGCCCA                                          >  SRR4302540.1126213/1‑94 (MQ=60)

                                                    GCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGA                                          >  SRR4302540.8910578/1‑94 (MQ=60)

                                                     CAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAA                                         >  SRR4302540.600898/1‑94 (MQ=60)

                                                      AATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAAT                                        >  SRR4302540.6808364/1‑94 (MQ=60)

                                                      AATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAAT                                        >  SRR4302540.1309578/1‑94 (MQ=60)

                                                      AATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAAT                                        >  SRR4302540.6883534/1‑94 (MQ=60)

                                                       ATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATC                                       >  SRR4302540.9671559/1‑94 (MQ=60)

                                                       ATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATC                                       >  SRR4302540.275867/1‑94 (MQ=60)

                                                        TGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCA                                      >  SRR4302540.660133/1‑94 (MQ=60)

                                                         GTAACAAGTGTGTTGATCTGAGCCAGGGTCAGTTTTGCCCCTCTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAA                                     <  SRR4302540.5371497/94‑1 (MQ=60)

                                                          TAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAAT                                    <  SRR4302540.4825527/94‑1 (MQ=60)

                                                          TAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAAT                                    >  SRR4302540.5977287/1‑94 (MQ=60)

                                                          TAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAAT                                    >  SRR4302540.5186421/1‑94 (MQ=60)

                                                          TAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACAATCCGCCGAATCAAT                                    >  SRR4302540.5977288/1‑94 (MQ=60)

                                                           AACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATA                                   >  SRR4302540.9408994/1‑94 (MQ=60)

                                                            ACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAA                                  >  SRR4302540.3376451/1‑94 (MQ=60)

                                                            ACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAA                                  >  SRR4302540.7877329/1‑94 (MQ=60)

                                                            ACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACAATCCGCCGAATCAATAA                                  >  SRR4302540.2704366/1‑94 (MQ=60)

                                                            ACAAGTGTGTTGATCTGAGCCAGGGTCAGTTTTGCCCCACTCAGGGGTGGAATGTTGCACACCACCATCGGCAAACCATCCGCCGAATCAATAA                                  <  SRR4302540.6330219/94‑1 (MQ=60)

                                                             CAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAAT                                 <  SRR4302540.1917046/94‑1 (MQ=60)

                                                              AAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATT                                >  SRR4302540.2738173/1‑94 (MQ=60)

                                                              AAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATT                                <  SRR4302540.3575678/94‑1 (MQ=60)

                                                              AAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATT                                >  SRR4302540.4009160/1‑94 (MQ=60)

                                                              AAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATT                                >  SRR4302540.4974405/1‑94 (MQ=60)

                                                               AGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTG                               >  SRR4302540.4378124/1‑94 (MQ=60)

                                                                GTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGC                              >  SRR4302540.907070/1‑94 (MQ=60)

                                                                GTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGC                              >  SRR4302540.9426027/1‑94 (MQ=60)

                                                                GTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGC                              >  SRR4302540.907071/1‑94 (MQ=60)

                                                                 TGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCC                             <  SRR4302540.7684928/94‑1 (MQ=60)

                                                                  GTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCC                            >  SRR4302540.9429968/1‑94 (MQ=60)

                                                                  GTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCC                            <  SRR4302540.4283831/94‑1 (MQ=60)

                                                                  GTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCC                            <  SRR4302540.7082010/94‑1 (MQ=60)

                                                                   TGTTGATCTGATCCGGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTTTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCG                           <  SRR4302540.4101500/94‑1 (MQ=60)

                                                                   TGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCG                           >  SRR4302540.8008319/1‑94 (MQ=60)

                                                                   TGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCG                           >  SRR4302540.2463784/1‑94 (MQ=60)

                                                                   TGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCG                           >  SRR4302540.961929/1‑94 (MQ=60)

                                                                   TGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCG                           <  SRR4302540.4101501/94‑1 (MQ=60)

                                                                     TTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGAT                         >  SRR4302540.2867056/1‑94 (MQ=60)

                                                                     TTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGAT                         >  SRR4302540.899833/1‑94 (MQ=60)

                                                                      TGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATA                        >  SRR4302540.1771922/1‑94 (MQ=60)

                                                                      TGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCACCCGCCGAATCAATAATTGCCCGATA                        <  SRR4302540.8126260/94‑1 (MQ=60)

                                                                       GATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTTGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAG                       <  SRR4302540.615091/94‑1 (MQ=60)

                                                                       GATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTGCACCACCATCGGCAAACCATCCGCTGAATCAATAATTGCCCGATAG                       <  SRR4302540.779578/94‑1 (MQ=60)

                                                                       GATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTGCACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAG                       <  SRR4302540.779579/94‑1 (MQ=60)

                                                                       GATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAG                       <  SRR4302540.8980150/94‑1 (MQ=60)

                                                                       GATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAG                       <  SRR4302540.763180/94‑1 (MQ=60)

                                                                        ATCTTATCCAGGGTCAGTTTTGCCCCACGCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGT                      <  SRR4302540.6897253/94‑1 (MQ=60)

                                                                        ATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGT                      >  SRR4302540.1549381/1‑94 (MQ=60)

                                                                        ATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGG                      >  SRR4302540.3468214/1‑94 (MQ=60)

                                                                         TCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTG                     <  SRR4302540.1151074/94‑1 (MQ=60)

                                                                         TCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTG                     >  SRR4302540.8134133/1‑94 (MQ=60)

                                                                          CTGATCCAGGGTCAGTTTTGCCCGACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGA                    >  SRR4302540.1801770/1‑94 (MQ=60)

                                                                          CTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGA                    >  SRR4302540.3451/1‑94 (MQ=60)

                                                                          CTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGA                    <  SRR4302540.24681/94‑1 (MQ=60)

                                                                          CTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGA                    <  SRR4302540.2684682/94‑1 (MQ=60)

                                                                           TGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGAT                   >  SRR4302540.822022/1‑94 (MQ=60)

                                                                           TGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGAT                   <  SRR4302540.2088587/94‑1 (MQ=60)

                                                                            GATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATC                  >  SRR4302540.657819/1‑94 (MQ=60)

                                                                            GATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATC                  <  SRR4302540.109392/94‑1 (MQ=60)

                                                                            GATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATC                  <  SRR4302540.3488211/94‑1 (MQ=60)

                                                                             ATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCG                 >  SRR4302540.3137901/1‑94 (MQ=60)

                                                                             ATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCG                 >  SRR4302540.8844260/1‑94 (MQ=60)

                                                                             ATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCG                 <  SRR4302540.7195126/94‑1 (MQ=60)

                                                                             ATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCG                 <  SRR4302540.7124118/94‑1 (MQ=60)

                                                                              TCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGC                >  SRR4302540.329217/1‑94 (MQ=60)

                                                                              TCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGC                >  SRR4302540.4232334/1‑94 (MQ=60)

                                                                               CCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCA               >  SRR4302540.6184330/1‑94 (MQ=60)

                                                                               CCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCA               <  SRR4302540.3030108/94‑1 (MQ=60)

                                                                               CCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCA               >  SRR4302540.1757465/1‑94 (MQ=60)

                                                                                CAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAG              >  SRR4302540.3107285/1‑94 (MQ=60)

                                                                                CAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAG              >  SRR4302540.5858995/1‑94 (MQ=60)

                                                                                 AGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGT             <  SRR4302540.7233128/94‑1 (MQ=60)

                                                                                  GGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTG            <  SRR4302540.3727503/94‑1 (MQ=60)

                                                                                   GGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGT           >  SRR4302540.1751424/1‑94 (MQ=60)

                                                                                    GTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTT          >  SRR4302540.10045263/1‑94 (MQ=60)

                                                                                    GTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTT          >  SRR4302540.949999/1‑94 (MQ=60)

                                                                                    GTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTT          <  SRR4302540.5548982/94‑1 (MQ=60)

                                                                                    GTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTT          <  SRR4302540.6834204/94‑1 (MQ=60)

                                                                                     TCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTC         <  SRR4302540.545805/94‑1 (MQ=60)

                                                                                      CAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCT        <  SRR4302540.876638/94‑1 (MQ=60)

                                                                                       AGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTT       <  SRR4302540.5538688/94‑1 (MQ=60)

                                                                                       AGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTT       <  SRR4302540.5538687/94‑1 (MQ=60)

                                                                                        GTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCACTAATTGCCCGATAGTGATCGCAGTGTTCTTC      >  SRR4302540.5827721/1‑94 (MQ=60)

                                                                                        GTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTC      >  SRR4302540.5206314/1‑94 (MQ=60)

                                                                                         TTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCA     <  SRR4302540.4486479/94‑1 (MQ=60)

                                                                                         TTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCA     >  SRR4302540.3759702/1‑94 (MQ=60)

                                                                                          TTTGCCCCACTCAGGGCTGGAATGTTGTACCCCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCAA    <  SRR4302540.5483843/94‑1 (MQ=60)

                                                                                          TTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCAA    <  SRR4302540.8041750/94‑1 (MQ=60)

                                                                                           TTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCAAA   >  SRR4302540.4685438/1‑94 (MQ=60)

                                                                                           TTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCAAA   >  SRR4302540.7185050/1‑94 (MQ=60)

                                                                                            TGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCAAAG  >  SRR4302540.6498862/1‑94 (MQ=60)

                                                                                            TGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCAAAG  <  SRR4302540.1582001/94‑1 (MQ=60)

                                                                                            TGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCAAAG  <  SRR4302540.9565914/94‑1 (MQ=60)

                                                                                            TGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCAAAG  >  SRR4302540.4113325/1‑94 (MQ=60)

                                                                                            TGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCAAAG  <  SRR4302540.1205097/94‑1 (MQ=60)

TGCTCCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTACCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCAAAG  >  NC_000913/3370685‑3370870

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`