Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,407,232	G→A	A176T (GCG→ACG)	prmA →	PrmA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,407,232	0	G	A	99.2%	1344.4 / ‑6.4	376	A176T (GCG→ACG)	prmA	PrmA
Reads supporting (aligned to +/- strand): ref base G (0/3); new base A (205/168); total (205/171)
Fisher's exact test for biased strand distribution p-value = 9.32e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 401 total aligned reads displayed.

TCTCTGTGCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGGCGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAATGGC  >  NC_000913/3407142‑3407321

tctctGTGCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCgcgacg                                                                                         >  2:3533065/1‑93 (MQ=255)

tctctGTGCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCgcgacg                                                                                         >  2:9148710/1‑93 (MQ=255)

  tctGTGCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCt                                                                                       <  2:8406405/93‑1 (MQ=255)

  tctGTGCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCt                                                                                       >  1:7650384/1‑93 (MQ=255)

    tgtgCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGa                                                                                     <  1:7960037/93‑1 (MQ=255)

       gCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAAc                                                                                  <  1:9164559/93‑1 (MQ=255)

        ccTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACt                                                                                 >  1:5634231/1‑93 (MQ=255)

          tGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATGGACTTTTGCTGTGGGTCCGGCATTCTGGCGATCGCGACGCTGAAACTgg                                                                               >  1:314054/1‑93 (MQ=255)

          tGCAATGGCTCGACAGCCTCGATTTAACCCGTAAAACAGTAATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACtcg                                                                               >  1:7869764/1‑91 (MQ=255)

           gCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTggg                                                                              <  1:8777263/93‑1 (MQ=255)

            cAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGt                                                                             <  2:8706154/93‑1 (MQ=255)

            cAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGt                                                                             >  2:5145830/1‑93 (MQ=255)

             aaTGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTg                                                                            >  1:3368636/1‑93 (MQ=255)

              aTGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTgc                                                                           >  2:6648839/1‑93 (MQ=255)

              aTGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGGgc                                                                           >  2:8108402/1‑93 (MQ=255)

               tGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTgca                                                                          <  1:3790868/93‑1 (MQ=255)

                   tCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGCCGCTGAAATTGGGTGCAGCaa                                                                      >  1:402330/1‑93 (MQ=255)

                    cGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCaaa                                                                     <  1:8028697/93‑1 (MQ=255)

                    cGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCaaa                                                                     <  2:4587055/93‑1 (MQ=255)

                    cGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCaaa                                                                     >  2:3753085/1‑93 (MQ=255)

                     gACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCaaaa                                                                    >  1:6475636/1‑93 (MQ=255)

                       cAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGc                                                                  <  1:5236111/93‑1 (MQ=255)

                       cAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGc                                                                  <  1:1859712/93‑1 (MQ=255)

                         gCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCa                                                                <  1:2153812/93‑1 (MQ=255)

                          ccTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCAt                                                               >  2:7921079/1‑93 (MQ=255)

                           cTCGATTTAACCGGTAAAATAGTCATCGCCTTTGGCTGTGGTTCTGGCATTATCGCGGTCGCGCCGCTGAAATTGTGGGCAGCAAACGCCAtg                                                              >  1:8637977/1‑92 (MQ=255)

                            tCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTg                                                             >  1:8295670/1‑93 (MQ=255)

                             cGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTgg                                                            <  1:1613981/93‑1 (MQ=255)

                               aTTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTa                                                          >  2:7046772/1‑93 (MQ=255)

                               aTTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTa                                                          <  1:7598038/93‑1 (MQ=255)

                                tttAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTAt                                                         <  2:10005591/93‑1 (MQ=255)

                                tttAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTAt                                                         >  1:944240/1‑93 (MQ=255)

                                 ttAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTAtt                                                        <  2:9600893/93‑1 (MQ=255)

                                  tAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTg                                                       <  1:10015967/93‑1 (MQ=255)

                                   aaCCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGa                                                      >  2:3621187/1‑93 (MQ=255)

                                    aCCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGat                                                     >  2:4897058/1‑93 (MQ=255)

                                     ccGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGata                                                    >  1:9919047/1‑93 (MQ=255)

                                      cGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGGCATTGGTATTGatat                                                   >  2:730873/1‑93 (MQ=255)

                                       ggTAAAACAGTCATCGACTTTGGCTGTTGTTACGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGagatg                                                  >  2:6868116/1‑92 (MQ=255)

                                       ggTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATc                                                  >  2:1155255/1‑93 (MQ=255)

                                       ggTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATc                                                  >  1:1133301/1‑93 (MQ=255)

                                        gTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCg                                                 >  1:4778721/1‑93 (MQ=255)

                                         tAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGa                                                <  1:7317685/93‑1 (MQ=255)

                                         tAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGa                                                >  2:3967923/1‑93 (MQ=255)

                                         tAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGa                                                <  2:2683644/93‑1 (MQ=255)

                                         tAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGa                                                <  2:1196460/93‑1 (MQ=255)

                                          aaaaCAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGAt                                               >  2:5264568/1‑93 (MQ=255)

                                           aaaCAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATc                                              >  2:9294113/1‑93 (MQ=255)

                                           aaaCAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATc                                              >  2:7868050/1‑93 (MQ=255)

                                           aaaCAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTAGTATTGATATCGATc                                              >  1:7769493/1‑93 (MQ=255)

                                            aaCAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATcc                                             <  2:5200785/93‑1 (MQ=255)

                                              cAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGc                                           <  2:7426839/93‑1 (MQ=255)

                                               aGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCa                                          <  1:2747245/93‑1 (MQ=255)

                                               aGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCa                                          <  1:8220956/93‑1 (MQ=255)

                                               aGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCa                                          >  1:22360/1‑93 (MQ=255)

                                                 tCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAgg                                        >  2:1550305/1‑93 (MQ=255)

                                                 tCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAgg                                        >  1:3922632/1‑93 (MQ=255)

                                                    tCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCACAAGCCATTGGTATTGATATCGATCCGCAGGCGa                                     >  1:9671084/1‑93 (MQ=255)

                                                    tCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGa                                     >  2:7619805/1‑93 (MQ=255)

                                                    ccGACTGTGGCTGTGGTTCCGGCATTCTGGCGATCGCGGCGCTGAACCTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGa                                     <  1:4207515/92‑1 (MQ=255)

                                                      gattttGGCTGTGGTCCGGGCTTTCTGGCGATCGCGACGCGAAACCGGGGTGCAGAAAAAGCAATTGTTATTGATATCGACCCGCGGGCGttt                                   <  2:4831417/90‑1 (MQ=255)

                                                      gACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAACCTGGGTGCACAACACGCCATTGGTATTGATATCGCTCCGCAGGCGAtt                                   >  1:2587376/1‑93 (MQ=255)

                                                      gACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGAtt                                   >  2:6395248/1‑93 (MQ=255)

                                                       aCTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTc                                  <  1:199772/93‑1 (MQ=255)

                                                        cTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCa                                 >  1:6825704/1‑93 (MQ=255)

                                                        cTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCa                                 <  2:297687/93‑1 (MQ=255)

                                                        cTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCa                                 <  1:1540891/93‑1 (MQ=255)

                                                         tttGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAg                                >  2:5939289/1‑93 (MQ=255)

                                                         tttGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAg                                >  2:2460432/1‑93 (MQ=255)

                                                           tGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGc                              <  1:6198442/93‑1 (MQ=255)

                                                           tGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGc                              <  2:3429020/93‑1 (MQ=255)

                                                             gCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCa                            <  2:6222356/93‑1 (MQ=255)

                                                              cTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAg                           >  1:5074855/1‑93 (MQ=255)

                                                               tgtgGTTCCGGCATTCTGGCGATCGCGGCGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGc                          <  2:1920292/93‑1 (MQ=255)

                                                                gtgGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGcc                         >  2:5409907/1‑93 (MQ=255)

                                                                gtgGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGcc                         <  1:5904557/93‑1 (MQ=255)

                                                                 tgGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCcg                        >  1:1250840/1‑93 (MQ=255)

                                                                    ttCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGa                     <  2:8305161/93‑1 (MQ=255)

                                                                    ttCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGa                     >  2:4707999/1‑93 (MQ=255)

                                                                      ccGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATa                   <  2:9417602/93‑1 (MQ=255)

                                                                       cGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATaa                  <  1:5742690/93‑1 (MQ=255)

                                                                       cGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATaa                  <  1:3272603/93‑1 (MQ=255)

                                                                          cATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGc               >  1:6507734/1‑93 (MQ=255)

                                                                           aTTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGcc              >  1:5368049/1‑93 (MQ=255)

                                                                           aTTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGcc              >  2:2876976/1‑93 (MQ=255)

                                                                            ttCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCg             >  1:292971/1‑93 (MQ=255)

                                                                            ttCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCg             >  2:75156/1‑93 (MQ=255)

                                                                               tGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAAc          >  2:1665614/1‑93 (MQ=255)

                                                                               tGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAAc          >  2:4352885/1‑93 (MQ=255)

                                                                                ggCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACg         <  2:6036555/93‑1 (MQ=255)

                                                                                  cGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTa       <  2:5569930/93‑1 (MQ=255)

                                                                                   gATGGCGACGCTGAAACTGGGTTCAGCAAAAGCCATTGGTATTGAAATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTaa      <  2:3297779/93‑1 (MQ=255)

                                                                                   gATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTaa      <  2:1426384/93‑1 (MQ=255)

                                                                                    aTCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAAt     >  1:9942187/1‑93 (MQ=255)

                                                                                    aTCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAAt     <  2:421364/93‑1 (MQ=255)

                                                                                    aTCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAAt     >  1:8908305/1‑93 (MQ=255)

                                                                                     tCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAATg    >  1:6904893/1‑93 (MQ=255)

                                                                                     tCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAATg    >  1:9306415/1‑93 (MQ=255)

                                                                                      cgcgACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAATgg   <  1:7178532/93‑1 (MQ=255)

                                                                                       gcgacgCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAATGGc  >  1:4566984/1‑93 (MQ=255)

TCTCTGTGCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGGCGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAATGGC  >  NC_000913/3407142‑3407321

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 218 total aligned reads displayed.

ACCTCTCTGTGCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGGCGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAATGGCGTTT  >  NC_000913/3407139‑3407325

ACCTCTCTGTGCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGA                                                                                               >  SRR4302540.7923457/1‑94 (MQ=60)

 CCTCTCTGTGCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGAC                                                                                              <  SRR4302540.1227262/94‑1 (MQ=60)

 CCTCTCTGTGCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGAC                                                                                              <  SRR4302540.3856247/94‑1 (MQ=60)

 CCTCTCTGTGCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGAC                                                                                              <  SRR4302540.2765541/94‑1 (MQ=60)

  CTCTCTGTGCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACG                                                                                             >  SRR4302540.10040558/1‑94 (MQ=60)

  CTCTCTGTGCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACG                                                                                             >  SRR4302540.1943670/1‑94 (MQ=60)

  CTCTCTGTGCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACG                                                                                             >  SRR4302540.3850575/1‑94 (MQ=60)

  CTCTCTGTGCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACG                                                                                             <  SRR4302540.9522366/94‑1 (MQ=60)

    CTCTGTGCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGCTCGCGACGCT                                                                                           >  SRR4302540.6253142/1‑94 (MQ=60)

    CTCTGTGCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCT                                                                                           >  SRR4302540.7736510/1‑94 (MQ=60)

       TGTGCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAA                                                                                        <  SRR4302540.8038693/94‑1 (MQ=60)

       TGTGCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAA                                                                                        <  SRR4302540.8052810/94‑1 (MQ=60)

        GTGCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTGATCGACTTTGGATGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAA                                                                                       <  SRR4302540.1822573/94‑1 (MQ=60)

        GTGCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAA                                                                                       >  SRR4302540.5713796/1‑94 (MQ=60)

        GTGCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAA                                                                                       <  SRR4302540.6557205/94‑1 (MQ=60)

        GTGCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAA                                                                                       >  SRR4302540.5248006/1‑94 (MQ=60)

        GTGCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAA                                                                                       <  SRR4302540.6557206/94‑1 (MQ=60)

         TGCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAAC                                                                                      <  SRR4302540.2217531/94‑1 (MQ=60)

         TGCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATCCTGGCGATCGCGACGCTGAAAC                                                                                      <  SRR4302540.1803741/94‑1 (MQ=60)

          GCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACT                                                                                     <  SRR4302540.1498474/94‑1 (MQ=60)

          GCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACT                                                                                     >  SRR4302540.5696242/1‑94 (MQ=60)

          GCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACT                                                                                     <  SRR4302540.9274527/94‑1 (MQ=60)

          GCCTGCAATGGCTCGACAGCCTCGATTGAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACT                                                                                     <  SRR4302540.1498475/94‑1 (MQ=60)

           CCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTG                                                                                    <  SRR4302540.1044176/94‑1 (MQ=60)

           CCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTG                                                                                    >  SRR4302540.117070/1‑94 (MQ=60)

            CTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGG                                                                                   >  SRR4302540.317181/1‑94 (MQ=60)

            CTGCAATGGCTCGACAGCCTCGATTTAACCCGTAAAACAGTAATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTCG                                                                                   >  SRR4302540.7961700/1‑94 (MQ=60)

             TGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGG                                                                                  >  SRR4302540.3117533/1‑94 (MQ=60)

             TGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGG                                                                                  <  SRR4302540.7784936/94‑1 (MQ=60)

             TGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGG                                                                                  <  SRR4302540.874577/94‑1 (MQ=60)

              GCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGT                                                                                 <  SRR4302540.8878917/94‑1 (MQ=60)

              GCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGT                                                                                 >  SRR4302540.6560165/1‑94 (MQ=60)

              GCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGG                                                                                 >  SRR4302540.1565536/1‑94 (MQ=60)

               CAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTG                                                                                >  SRR4302540.3858590/1‑94 (MQ=60)

               CAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTG                                                                                <  SRR4302540.4690971/94‑1 (MQ=60)

               CAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTG                                                                                >  SRR4302540.3405475/1‑94 (MQ=60)

                 ATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCA                                                                              <  SRR4302540.2607697/94‑1 (MQ=60)

                 ATGGCTCGACAGCCTCGATTTAACCGGGAAAACAGTCATCGACTTTGGCTGTGGGTCCGGCATTCTTGCGATCGCGACGCTGAAACTGGGTGCA                                                                              >  SRR4302540.6494435/1‑94 (MQ=60)

                  TGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAG                                                                             <  SRR4302540.3832198/94‑1 (MQ=60)

                   GGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGC                                                                            <  SRR4302540.8144092/94‑1 (MQ=60)

                    GCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCA                                                                           >  SRR4302540.10056643/1‑94 (MQ=60)

                     CTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGCCGCTGAAATTGGGTGCAGCAA                                                                          >  SRR4302540.406527/1‑94 (MQ=60)

                       CGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAG                                                                        >  SRR4302540.7830470/1‑94 (MQ=60)

                       CGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAA                                                                        <  SRR4302540.8122055/94‑1 (MQ=60)

                       CGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAA                                                                        >  SRR4302540.6547690/1‑94 (MQ=60)

                       CGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAA                                                                        >  SRR4302540.4101351/1‑94 (MQ=60)

                       CGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAA                                                                        <  SRR4302540.5779745/94‑1 (MQ=60)

                        GACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAG                                                                       <  SRR4302540.7298359/94‑1 (MQ=60)

                         ACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGC                                                                      >  SRR4302540.3367964/1‑94 (MQ=60)

                         ACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGC                                                                      >  SRR4302540.9352699/1‑94 (MQ=60)

                          CAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCC                                                                     <  SRR4302540.1880107/94‑1 (MQ=60)

                          CAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCC                                                                     <  SRR4302540.5117944/94‑1 (MQ=60)

                          CAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCC                                                                     >  SRR4302540.3986340/1‑94 (MQ=60)

                          CAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCC                                                                     <  SRR4302540.5293231/94‑1 (MQ=60)

                           AGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCA                                                                    <  SRR4302540.8362617/94‑1 (MQ=60)

                           AGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCA                                                                    <  SRR4302540.5229241/94‑1 (MQ=60)

                           AGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCA                                                                    >  SRR4302540.2005893/1‑94 (MQ=60)

                           AGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCA                                                                    >  SRR4302540.7393874/1‑94 (MQ=60)

                           AGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCA                                                                    >  SRR4302540.7146260/1‑94 (MQ=60)

                            GCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCAT                                                                   <  SRR4302540.1086222/94‑1 (MQ=60)

                            GCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCAT                                                                   <  SRR4302540.2176982/94‑1 (MQ=60)

                            GCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCAT                                                                   <  SRR4302540.6710097/94‑1 (MQ=60)

                             CCTCGATTTAACCGGTAAAATAGTCATCGCCTTTGGCTGTGGTTCTGGCATTATCGCGGTCGCGCCGCTGAAATTGTGGGCAGCAAACGCCATG                                                                  >  SRR4302540.8738321/1‑94 (MQ=30)

                             CCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATG                                                                  >  SRR4302540.8738323/1‑94 (MQ=60)

                              CTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTG                                                                 >  SRR4302540.8391999/1‑94 (MQ=60)

                              CTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTG                                                                 <  SRR4302540.9347173/94‑1 (MQ=60)

                              CTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTG                                                                 <  SRR4302540.2821607/94‑1 (MQ=60)

                              CTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTG                                                                 >  SRR4302540.732391/1‑94 (MQ=60)

                               TCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGG                                                                >  SRR4302540.7879954/1‑94 (MQ=60)

                                CGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGT                                                               >  SRR4302540.6389919/1‑94 (MQ=60)

                                CGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGT                                                               >  SRR4302540.7504594/1‑94 (MQ=60)

                                CGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGT                                                               >  SRR4302540.5468850/1‑94 (MQ=60)

                                CGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGT                                                               <  SRR4302540.1631693/94‑1 (MQ=60)

                                 GATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTA                                                              >  SRR4302540.8372800/1‑94 (MQ=60)

                                 GATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTA                                                              <  SRR4302540.33164/94‑1 (MQ=60)

                                 GATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTA                                                              >  SRR4302540.816019/1‑94 (MQ=60)

                                  ATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTAT                                                             >  SRR4302540.954090/1‑94 (MQ=60)

                                  ATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTAT                                                             <  SRR4302540.7683407/94‑1 (MQ=60)

                                  ATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGAGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTAT                                                             >  SRR4302540.5252907/1‑94 (MQ=60)

                                  ATTTAACCGGTAAAAAACGCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTAT                                                             <  SRR4302540.7683408/94‑1 (MQ=60)

                                   TTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATT                                                            <  SRR4302540.9667323/94‑1 (MQ=60)

                                    TTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTG                                                           <  SRR4302540.4510376/94‑1 (MQ=60)

                                    TTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTG                                                           >  SRR4302540.8558253/1‑94 (MQ=60)

                                     TAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGA                                                          <  SRR4302540.10132558/94‑1 (MQ=60)

                                     TAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGA                                                          >  SRR4302540.9797963/1‑94 (MQ=60)

                                      AACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGAT                                                         <  SRR4302540.225578/94‑1 (MQ=60)

                                      AACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGAT                                                         <  SRR4302540.4774537/94‑1 (MQ=60)

                                       ACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATA                                                        >  SRR4302540.6425255/1‑94 (MQ=60)

                                       ACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATA                                                        >  SRR4302540.10034881/1‑94 (MQ=60)

                                       ACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGCGCAGCACAAGCCATTGGGATTGATA                                                        >  SRR4302540.6425256/1‑94 (MQ=60)

                                        CCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATAT                                                       <  SRR4302540.2618050/94‑1 (MQ=60)

                                        CCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATAT                                                       <  SRR4302540.9444443/94‑1 (MQ=60)

                                         CGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATC                                                      >  SRR4302540.1145111/1‑94 (MQ=60)

                                         CGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATC                                                      <  SRR4302540.2130740/94‑1 (MQ=60)

                                          GGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCG                                                     >  SRR4302540.6948799/1‑94 (MQ=60)

                                          GGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCG                                                     <  SRR4302540.2772258/94‑1 (MQ=60)

                                          GGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCG                                                     >  SRR4302540.1213601/1‑94 (MQ=60)

                                          GGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCG                                                     <  SRR4302540.4151739/94‑1 (MQ=60)

                                          GGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCG                                                     <  SRR4302540.9468586/94‑1 (MQ=60)

                                          GGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCG                                                     >  SRR4302540.4829777/1‑94 (MQ=60)

                                            gcAAACAGTCATCGACTTTGGTTGTGGTTCCGGCATTCTGGCGATCGCGCCGCGGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGAT                                                   <  SRR4302540.7399408/92‑1 (MQ=60)

                                            TAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGAT                                                   <  SRR4302540.7399409/94‑1 (MQ=60)

                                            TAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGAT                                                   >  SRR4302540.3546157/1‑94 (MQ=60)

                                             AAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATC                                                  <  SRR4302540.5405873/94‑1 (MQ=60)

                                             AAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATC                                                  >  SRR4302540.7860326/1‑94 (MQ=60)

                                             AAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTAGTATTGATATCGATC                                                  >  SRR4302540.7860327/1‑94 (MQ=60)

                                              AAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCC                                                 <  SRR4302540.5873381/94‑1 (MQ=60)

                                               AACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCG                                                <  SRR4302540.8973976/94‑1 (MQ=60)

                                               AACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCG                                                <  SRR4302540.1983214/94‑1 (MQ=60)

                                                ACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGC                                               <  SRR4302540.4053148/94‑1 (MQ=60)

                                                ACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGC                                               >  SRR4302540.2905638/1‑94 (MQ=60)

                                                 CAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCA                                              >  SRR4302540.22610/1‑94 (MQ=60)

                                                  AGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAG                                             >  SRR4302540.9056276/1‑94 (MQ=60)

                                                  AGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAG                                             <  SRR4302540.8794771/94‑1 (MQ=60)

                                                  AGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAG                                             <  SRR4302540.8316511/94‑1 (MQ=60)

                                                  AGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAG                                             <  SRR4302540.2776924/94‑1 (MQ=60)

                                                  AGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAG                                             >  SRR4302540.2639502/1‑94 (MQ=60)

                                                  AGGCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAG                                             <  SRR4302540.7203750/94‑1 (MQ=60)

                                                   GTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGG                                            >  SRR4302540.3965085/1‑94 (MQ=60)

                                                    TCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGC                                           <  SRR4302540.5627941/94‑1 (MQ=60)

                                                     CATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCG                                          >  SRR4302540.2235900/1‑94 (MQ=60)

                                                      ATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCACAAGCCATTGGTATTGATATCGATCCGCAGGCGA                                         >  SRR4302540.9784895/1‑94 (MQ=60)

                                                      ATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGA                                         <  SRR4302540.7117562/94‑1 (MQ=60)

                                                      ATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGA                                         <  SRR4302540.8673878/94‑1 (MQ=60)

                                                       CCGACTGTGGCTGTGGTTCCGGCATTCTGGCGATCGCGGCGCTGAACCTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGAT                                        <  SRR4302540.4253315/94‑1 (MQ=60)

                                                        CGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAACCTGGGTGCACAACACGCCATTGGTATTGATATCGCTCCGCAGGCGATT                                       >  SRR4302540.2615268/1‑94 (MQ=60)

                                                        CGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCGGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATT                                       >  SRR4302540.2615267/1‑94 (MQ=60)

                                                        CGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATT                                       <  SRR4302540.9056105/94‑1 (MQ=60)

                                                          ACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCA                                     >  SRR4302540.6901271/1‑94 (MQ=60)

                                                          ACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCA                                     <  SRR4302540.6875118/94‑1 (MQ=60)

                                                          ACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCA                                     <  SRR4302540.201743/94‑1 (MQ=60)

                                                          ACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCA                                     <  SRR4302540.247160/94‑1 (MQ=60)

                                                          ACTTTAGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCA                                     <  SRR4302540.85131/94‑1 (MQ=60)

                                                           CTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAG                                    <  SRR4302540.1628769/94‑1 (MQ=60)

                                                           CTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAG                                    <  SRR4302540.1557918/94‑1 (MQ=60)

                                                           CTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAACCCATTGCTATTGATATCGctcccacggcaagtgag                                    >  SRR4302540.3630954/1‑77 (MQ=60)

                                                           CTTTGGCTGTCGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAG                                    <  SRR4302540.9628442/94‑1 (MQ=60)

                                                            TTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGG                                   >  SRR4302540.10158193/1‑94 (MQ=60)

                                                             TTGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGC                                  >  SRR4302540.9695271/1‑94 (MQ=60)

                                                              TGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAGCTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCC                                 <  SRR4302540.9541591/94‑1 (MQ=60)

                                                              TGGCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCC                                 <  SRR4302540.6267445/94‑1 (MQ=60)

                                                               gcgggtggttgcgcgATTCTGGCGAGCGCGACGCTGAAACTGGGGGAAGAAAAGCCCATTGGTATTGATATCGATCCGCAGGCGATCCAGGCCA                                <  SRR4302540.9116502/79‑1 (MQ=37)

                                                                GCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAG                               >  SRR4302540.5129720/1‑94 (MQ=60)

                                                                GCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAG                               <  SRR4302540.3222652/94‑1 (MQ=60)

                                                                GCTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAG                               >  SRR4302540.5808953/1‑94 (MQ=60)

                                                                 CTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGC                              >  SRR4302540.7435987/1‑94 (MQ=60)

                                                                 CTGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGC                              <  SRR4302540.4469582/94‑1 (MQ=60)

                                                                  TGTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCC                             >  SRR4302540.7607593/1‑94 (MQ=60)

                                                                   GTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCG                            <  SRR4302540.2860982/94‑1 (MQ=60)

                                                                   GTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCG                            >  SRR4302540.1263611/1‑94 (MQ=60)

                                                                   GTGGTTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCG                            <  SRR4302540.5969764/94‑1 (MQ=60)

                                                                       tgtCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGAT                        <  SRR4302540.8068210/91‑1 (MQ=60)

                                                                       TTCCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGAT                        <  SRR4302540.8068211/94‑1 (MQ=60)

                                                                       TACCGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGAT                        <  SRR4302540.9134602/94‑1 (MQ=60)

                                                                          CGTCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAAC                     <  SRR4302540.5805999/94‑1 (MQ=60)

                                                                          CGGCTTTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAAC                     <  SRR4302540.3708741/94‑1 (MQ=60)

                                                                          CGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAATCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAAC                     <  SRR4302540.3847425/94‑1 (MQ=60)

                                                                          CGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAAC                     <  SRR4302540.8040099/94‑1 (MQ=60)

                                                                          CGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAAC                     <  SRR4302540.14300/94‑1 (MQ=60)

                                                                          CGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAAC                     <  SRR4302540.465323/94‑1 (MQ=60)

                                                                          CGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAAC                     <  SRR4302540.3393005/94‑1 (MQ=60)

                                                                          CGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAAC                     <  SRR4302540.3308323/94‑1 (MQ=60)

                                                                          CGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAAC                     <  SRR4302540.3002884/94‑1 (MQ=60)

                                                                          CGGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAAC                     <  SRR4302540.5805998/94‑1 (MQ=60)

                                                                           GGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACG                    <  SRR4302540.1656573/94‑1 (MQ=60)

                                                                           GGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACG                    >  SRR4302540.4475986/1‑94 (MQ=60)

                                                                           GGCATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACG                    <  SRR4302540.5733647/94‑1 (MQ=60)

                                                                             CATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCC                  >  SRR4302540.5427036/1‑94 (MQ=60)

                                                                             CATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCC                  >  SRR4302540.8987352/1‑94 (MQ=60)

                                                                              ATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATCACGCCG                 >  SRR4302540.7946715/1‑94 (MQ=60)

                                                                              ATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCG                 >  SRR4302540.7946716/1‑94 (MQ=60)

                                                                              ATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCG                 >  SRR4302540.5100220/1‑94 (MQ=60)

                                                                              ATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCG                 >  SRR4302540.3087966/1‑94 (MQ=60)

                                                                              ATTCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCG                 >  SRR4302540.295868/1‑94 (MQ=60)

                                                                                TCTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACACCGAA               >  SRR4302540.1187142/1‑94 (MQ=60)

                                                                                 CTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAAC              >  SRR4302540.2021031/1‑94 (MQ=60)

                                                                                 CTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAAC              >  SRR4302540.678112/1‑94 (MQ=60)

                                                                                 CTGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAAC              >  SRR4302540.8247985/1‑94 (MQ=60)

                                                                                  TGGCGATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACG             >  SRR4302540.9831011/1‑94 (MQ=60)

                                                                                     CGATCGCGACGCTGAAACTGGGTGCAGCAAAATCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAA          <  SRR4302540.40540/94‑1 (MQ=60)

                                                                                      GATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAAT         >  SRR4302540.9011458/1‑94 (MQ=60)

                                                                                      GATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAAT         >  SRR4302540.8069077/1‑94 (MQ=60)

                                                                                      GATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAAT         >  SRR4302540.10073636/1‑94 (MQ=60)

                                                                                      GATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAAT         >  SRR4302540.7692383/1‑94 (MQ=60)

                                                                                      GATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAAT         <  SRR4302540.5339652/94‑1 (MQ=60)

                                                                                      GATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAAT         >  SRR4302540.10058301/1‑94 (MQ=60)

                                                                                      GATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAAT         <  SRR4302540.9328760/94‑1 (MQ=60)

                                                                                      GATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAAT         >  SRR4302540.10058302/1‑94 (MQ=60)

                                                                                      GATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAAT         <  SRR4302540.5339915/94‑1 (MQ=60)

                                                                                      GATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAAG         >  SRR4302540.618283/1‑94 (MQ=60)

                                                                                      GATCGCGACGCTGAAACTGGGTGAAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAAT         >  SRR4302540.6918441/1‑94 (MQ=60)

                                                                                       ATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAATG        >  SRR4302540.6981662/1‑94 (MQ=60)

                                                                                       ATCGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAATG        >  SRR4302540.6981661/1‑94 (MQ=60)

                                                                                         CGCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAATGGC      >  SRR4302540.4616295/1‑94 (MQ=60)

                                                                                         CGCGACGCTGAAACGGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAATGGC      <  SRR4302540.3207437/94‑1 (MQ=60)

                                                                                          GCGACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAATGGCG     <  SRR4302540.10050592/94‑1 (MQ=60)

                                                                                            GACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAATGGCGTT   >  SRR4302540.10057105/1‑94 (MQ=60)

                                                                                            GACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAATGGCGTT   >  SRR4302540.4199327/1‑94 (MQ=60)

                                                                                             ACGCTGACACTGGGTGAAGAAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAATGGCGTTT  <  SRR4302540.5803878/94‑1 (MQ=60)

                                                                                             ACGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAATGGCGTTT  <  SRR4302540.7794798/94‑1 (MQ=60)

ACCTCTCTGTGCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGGCGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAATGGCGTTT  >  NC_000913/3407139‑3407325

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`