Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,410,192 T→C intergenic (+18/‑66) b3262 → / → yhdU putative methyltransferase/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,410,1920TC99.8% 1992.5 / NA 612intergenic (+18/‑66)b3262/yhdUputative methyltransferase/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (376/235);  minor base A (1/0);  total (377/235)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 631 total aligned reads displayed.

AAAAAGAAAGACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGTTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGGTGGCTC  >  NC_000913/3410102‑3410281
                                                                                          |                                                                                         
aaaaaGAAAGACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGctt                                                                                         <  2:208308/93‑1 (MQ=255)
aaaaaGAAAGACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGctt                                                                                         <  1:334441/93‑1 (MQ=255)
aaaaaGAAAGACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGctt                                                                                         >  1:162154/1‑93 (MQ=255)
  aaagaaagACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTc                                                                                       <  1:7232703/93‑1 (MQ=255)
    agaaagaCCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAg                                                                                     >  2:4807597/1‑93 (MQ=255)
    agaaagaCCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAg                                                                                     >  1:2804055/1‑93 (MQ=255)
        agaCCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGatta                                                                                 <  2:133000/93‑1 (MQ=255)
        agaCCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGatta                                                                                 >  2:6752475/1‑93 (MQ=255)
        agaCCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGatta                                                                                 >  1:10015830/1‑93 (MQ=255)
         gaCCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGattat                                                                                <  1:2626608/93‑1 (MQ=255)
           ccGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTc                                                                              <  1:4898613/93‑1 (MQ=255)
              gCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACATAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCAtt                                                                           >  2:6832973/1‑93 (MQ=255)
              gCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCAtt                                                                           >  1:812861/1‑93 (MQ=255)
               cAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCAttt                                                                          >  1:8668440/1‑93 (MQ=255)
                aaCCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTc                                                                         >  1:834564/1‑93 (MQ=255)
                aaCCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTc                                                                         >  2:4640130/1‑93 (MQ=255)
                aaCCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTc                                                                         <  2:1906061/93‑1 (MQ=255)
                aaCCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTc                                                                         >  1:4847995/1‑93 (MQ=255)
                 aCCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCg                                                                        >  2:1601075/1‑93 (MQ=255)
                  ccTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCgt                                                                       >  1:7963634/1‑93 (MQ=255)
                   cTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCgtg                                                                      <  1:6053221/93‑1 (MQ=255)
                     gTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAATGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGta                                                                    >  2:2247195/1‑93 (MQ=255)
                     gTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTACGCCTGGCTTTCAGATTATTCATTTCGTGta                                                                    >  1:5528245/1‑93 (MQ=255)
                     gTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGta                                                                    >  2:3081077/1‑93 (MQ=255)
                      tCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGtat                                                                   >  2:396990/1‑93 (MQ=255)
                      acAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGtat                                                                   >  2:5429085/2‑93 (MQ=255)
                         aaaCGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATAtt                                                                >  2:1001868/1‑93 (MQ=255)
                         aaaCGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATAtt                                                                >  2:746529/1‑93 (MQ=255)
                          aaCGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATAttt                                                               <  2:6950371/93‑1 (MQ=255)
                           aCGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTc                                                              <  1:4414953/93‑1 (MQ=255)
                            cGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTcc                                                             <  1:6418120/93‑1 (MQ=255)
                             gAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCt                                                            >  2:6478088/1‑93 (MQ=255)
                             gAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCt                                                            <  1:8729557/93‑1 (MQ=255)
                               aGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGc                                                          >  2:3451133/1‑93 (MQ=255)
                                gCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGcc                                                         >  2:2485033/1‑93 (MQ=255)
                                 ccGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCa                                                        <  2:8499844/93‑1 (MQ=255)
                                   ggTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGa                                                      >  1:4997078/1‑93 (MQ=255)
                                    gTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGAc                                                     <  1:7853415/93‑1 (MQ=255)
                                    gTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGAc                                                     >  2:3678921/1‑93 (MQ=255)
                                    gTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGAc                                                     >  1:4657332/1‑93 (MQ=255)
                                       aaGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTg                                                  >  2:1123016/1‑93 (MQ=255)
                                       aaGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTg                                                  <  2:8054774/93‑1 (MQ=255)
                                        aGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTgg                                                 >  1:9343914/1‑93 (MQ=255)
                                        aGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTgg                                                 >  1:2125991/1‑93 (MQ=255)
                                         gCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGt                                                >  1:5181928/1‑93 (MQ=255)
                                            aaGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTaa                                             <  1:3721183/93‑1 (MQ=255)
                                             aGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTaaa                                            <  2:5906279/93‑1 (MQ=255)
                                               ttGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACa                                          <  1:959222/93‑1 (MQ=255)
                                               ttGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACa                                          <  1:393953/93‑1 (MQ=255)
                                               ttGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACa                                          <  2:8713529/93‑1 (MQ=255)
                                                 gACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATg                                        <  2:6662450/93‑1 (MQ=255)
                                                 gACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATg                                        >  1:4150239/1‑93 (MQ=255)
                                                  aCCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGc                                       <  1:1192497/93‑1 (MQ=255)
                                                   ccccGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGca                                      >  1:4302861/1‑93 (MQ=255)
                                                    cccGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGcac                                     <  2:9023624/93‑1 (MQ=255)
                                                      cGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAg                                   >  1:8541042/1‑93 (MQ=255)
                                                      cGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAg                                   <  2:8270525/93‑1 (MQ=255)
                                                       gATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAgg                                  >  1:3225589/1‑93 (MQ=255)
                                                        aTCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGc                                 <  2:4399623/93‑1 (MQ=255)
                                                        aTCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGc                                 >  1:8216852/1‑93 (MQ=255)
                                                        aTCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGc                                 <  1:2960392/93‑1 (MQ=255)
                                                         tctcATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCt                                >  1:1076929/1‑93 (MQ=255)
                                                          ctcATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTc                               <  2:1217987/93‑1 (MQ=255)
                                                          ctcATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTc                               >  2:2640857/1‑93 (MQ=255)
                                                          ctcATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTc                               >  2:491047/1‑93 (MQ=255)
                                                           tcATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCa                              >  2:7056986/1‑93 (MQ=255)
                                                           tcATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCa                              <  2:9184835/93‑1 (MQ=255)
                                                            cATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAg                             <  1:5827580/93‑1 (MQ=255)
                                                              ttACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACCTGCACAGGCTCAGGt                           >  1:2547509/1‑93 (MQ=255)
                                                              ttACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGt                           >  2:9677718/1‑93 (MQ=255)
                                                               tACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTa                          >  2:4186281/1‑93 (MQ=255)
                                                                 cAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAAt                        >  2:8843580/1‑93 (MQ=255)
                                                                  aaaGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATg                       >  1:1960333/1‑93 (MQ=255)
                                                                   aaGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGa                      >  1:9021919/1‑93 (MQ=255)
                                                                   aaGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGa                      >  1:9877693/1‑93 (MQ=255)
                                                                    aGTAAAGGATGTGTAAGCCCGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGAt                     >  2:3875039/1‑93 (MQ=255)
                                                                     gTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGAtt                    >  2:7875735/1‑93 (MQ=255)
                                                                        aaGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGc                 >  1:1772538/1‑93 (MQ=255)
                                                                        aaGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGc                 >  1:6758896/1‑93 (MQ=255)
                                                                        aaGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGc                 >  1:5261161/1‑93 (MQ=255)
                                                                         aGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCa                >  1:698730/1‑93 (MQ=255)
                                                                          ggATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCaa               >  2:1836332/1‑93 (MQ=255)
                                                                           gATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAg              >  2:6156283/1‑93 (MQ=255)
                                                                           gATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAg              >  2:3199759/1‑93 (MQ=255)
                                                                           gATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAg              >  1:2310028/1‑93 (MQ=255)
                                                                           gATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAg              >  1:5895229/1‑93 (MQ=255)
                                                                            aTGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGt             >  1:6558852/1‑93 (MQ=255)
                                                                             tgtgTAAGCCTGGCTTTCAGATTATTCATTTCGTGTTTATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTa            >  1:5459690/1‑93 (MQ=255)
                                                                             tgtgTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTa            <  2:5570413/93‑1 (MQ=255)
                                                                             tgtgTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTAAGGTAATGATTCGCAAGTa            <  2:5292031/93‑1 (MQ=255)
                                                                              gtgtAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTAt           <  1:911345/93‑1 (MQ=255)
                                                                              gtgtAAGCCTGGCTTGCAGATGATTCATTTCGTGTATATTGCCTGCCAGACTTGGGTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTAt           <  2:7296230/93‑1 (MQ=255)
                                                                               tgtAAGCCTGGCTTTCAGATTATTCATTTCGTATATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTAtt          <  1:7691958/93‑1 (MQ=255)
                                                                                 tAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATtgg        >  2:761010/1‑93 (MQ=255)
                                                                                   aGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATtggtg      >  2:8594072/1‑93 (MQ=255)
                                                                                   aGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATtggtg      <  2:4986806/93‑1 (MQ=255)
                                                                                      cTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGGTGGCt   >  2:942661/1‑93 (MQ=255)
                                                                                      cTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGGTGGCt   >  1:1340170/1‑93 (MQ=255)
                                                                                       tGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGGTGGCtc  >  2:8130482/1‑93 (MQ=255)
                                                                                       tGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGGTGGCtc  >  1:7472998/1‑93 (MQ=255)
                                                                                          |                                                                                         
AAAAAGAAAGACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGTTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGGTGGCTC  >  NC_000913/3410102‑3410281

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 347 total aligned reads displayed.
GAAAAAAAGAAAGACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGTTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGGTGGCTCGTCG  >  NC_000913/3410099‑3410285
                                                                                             |                                                                                             
GAAAAAAAGAAAGACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGC                                                                                               >  SRR4302540.4858532/1‑94 (MQ=60)
GAAAAAAAGAAAGACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGC                                                                                               <  SRR4302540.4006665/94‑1 (MQ=60)
GAAAAAAAGAAAGACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGC                                                                                               <  SRR4302540.6871507/94‑1 (MQ=60)
GAAAAAAAGAAAGACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGC                                                                                               <  SRR4302540.5170019/94‑1 (MQ=60)
  AAAAAAGAAAGACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTT                                                                                             <  SRR4302540.2228791/94‑1 (MQ=60)
   AAAAAGAAAGACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTT                                                                                            <  SRR4302540.8583380/94‑1 (MQ=60)
   AAAAAGAAAGACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTT                                                                                            >  SRR4302540.2708030/1‑94 (MQ=60)
   AAAAAGAAAGACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTT                                                                                            <  SRR4302540.2894615/94‑1 (MQ=60)
   AAAAAGAAAGACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTT                                                                                            >  SRR4302540.833194/1‑94 (MQ=60)
   AAAAAGAAAGACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTT                                                                                            <  SRR4302540.337802/94‑1 (MQ=60)
     AAAGAAAGACCGGCAACCTGTTAAAACGAAGCCGGTTAAGCGAGGTTGACCCCAATCTCATACCAAAGTAAAGGATGTGGAAGCCTGGCTTTCA                                                                                          >  SRR4302540.7474478/1‑94 (MQ=60)
     AAAGAAAGACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCA                                                                                          >  SRR4302540.49239/1‑94 (MQ=60)
     AAAGAAAGACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCA                                                                                          >  SRR4302540.7782454/1‑94 (MQ=60)
      AAGAAAGACCGGGAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTTCCCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAG                                                                                         <  SRR4302540.2594881/94‑1 (MQ=60)
       AGAAAGACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGA                                                                                        >  SRR4302540.927475/1‑94 (MQ=60)
       AGAAAGACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGA                                                                                        <  SRR4302540.1998441/94‑1 (MQ=60)
        GAAAGACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGAT                                                                                       >  SRR4302540.8813011/1‑94 (MQ=60)
        GAAAGACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGAT                                                                                       <  SRR4302540.158811/94‑1 (MQ=60)
          AAGACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTA                                                                                     >  SRR4302540.10132419/1‑94 (MQ=60)
           AGACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGTTGTGTAAGCCTGGCTTTCAGATTAT                                                                                    >  SRR4302540.1170982/1‑94 (MQ=60)
           AGACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTAT                                                                                    <  SRR4302540.9752779/94‑1 (MQ=60)
           AGACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTAT                                                                                    <  SRR4302540.4659438/94‑1 (MQ=60)
           AGACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCAGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTAT                                                                                    >  SRR4302540.7240761/1‑94 (MQ=60)
            GACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATT                                                                                   <  SRR4302540.2655020/94‑1 (MQ=60)
            GACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATT                                                                                   <  SRR4302540.2497599/94‑1 (MQ=60)
             ACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTC                                                                                  <  SRR4302540.1575329/94‑1 (MQ=60)
              CCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCA                                                                                 >  SRR4302540.10157479/1‑94 (MQ=60)
              CCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCA                                                                                 <  SRR4302540.4934129/94‑1 (MQ=60)
              CCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCA                                                                                 >  SRR4302540.7953235/1‑94 (MQ=60)
              CCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCA                                                                                 >  SRR4302540.1783085/1‑94 (MQ=60)
               CGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCAT                                                                                >  SRR4302540.5141120/1‑94 (MQ=60)
                GGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATT                                                                               >  SRR4302540.8648536/1‑94 (MQ=60)
                GGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATT                                                                               <  SRR4302540.4353647/94‑1 (MQ=60)
                GGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATT                                                                               <  SRR4302540.7968510/94‑1 (MQ=60)
                GGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATT                                                                               >  SRR4302540.821496/1‑94 (MQ=60)
                 GCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTT                                                                              >  SRR4302540.5302435/1‑94 (MQ=60)
                 GCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTT                                                                              <  SRR4302540.5697524/94‑1 (MQ=60)
                 GCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTT                                                                              >  SRR4302540.7348347/1‑94 (MQ=60)
                  CAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTC                                                                             >  SRR4302540.9686323/1‑94 (MQ=60)
                  CAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTC                                                                             >  SRR4302540.843430/1‑94 (MQ=60)
                  CAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTC                                                                             >  SRR4302540.1316756/1‑94 (MQ=60)
                  CAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTC                                                                             >  SRR4302540.4899935/1‑94 (MQ=60)
                   AACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCG                                                                            <  SRR4302540.8451163/94‑1 (MQ=60)
                   AACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCG                                                                            >  SRR4302540.164113/1‑94 (MQ=60)
                     CCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTG                                                                          <  SRR4302540.1930730/94‑1 (MQ=60)
                     CCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTG                                                                          >  SRR4302540.8074389/1‑94 (MQ=60)
                     CCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCACTTCGTG                                                                          <  SRR4302540.8779685/94‑1 (MQ=60)
                      CTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGT                                                                         >  SRR4302540.1796487/1‑94 (MQ=60)
                      CTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGT                                                                         >  SRR4302540.4958488/1‑94 (MQ=60)
                      CTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGT                                                                         <  SRR4302540.6120494/94‑1 (MQ=60)
                       TGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTACGCCTGGCTTTCAGATTATTCATTTCGTGTA                                                                        >  SRR4302540.5589129/1‑94 (MQ=60)
                       TGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTA                                                                        >  SRR4302540.1566560/1‑94 (MQ=60)
                        GTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTAT                                                                       >  SRR4302540.2148823/1‑94 (MQ=60)
                        GTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGCCAAGGATGTGTAAGCCTGGCTTTCAGCTTATTCATTTCGTGTAT                                                                       >  SRR4302540.1763105/1‑94 (MQ=60)
                          CAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATAT                                                                     >  SRR4302540.4759039/1‑94 (MQ=60)
                          CAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATAT                                                                     >  SRR4302540.2282142/1‑94 (MQ=60)
                           AAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATT                                                                    >  SRR4302540.8512708/1‑94 (MQ=60)
                           AAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATT                                                                    >  SRR4302540.602522/1‑94 (MQ=60)
                           AAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATT                                                                    <  SRR4302540.646229/94‑1 (MQ=60)
                            AAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTT                                                                   >  SRR4302540.9277042/1‑94 (MQ=60)
                            AAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTT                                                                   <  SRR4302540.8717255/94‑1 (MQ=60)
                             AACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTC                                                                  >  SRR4302540.9174238/1‑94 (MQ=60)
                             AACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTC                                                                  <  SRR4302540.6410664/94‑1 (MQ=60)
                              ACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCC                                                                 <  SRR4302540.5029040/94‑1 (MQ=60)
                              ACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCC                                                                 >  SRR4302540.2759594/1‑94 (MQ=60)
                              ACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCC                                                                 <  SRR4302540.4462800/94‑1 (MQ=60)
                              ACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCC                                                                 <  SRR4302540.2404295/94‑1 (MQ=60)
                               CGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCT                                                                >  SRR4302540.9138365/1‑94 (MQ=60)
                               CGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCT                                                                <  SRR4302540.9509622/94‑1 (MQ=60)
                                GAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTG                                                               >  SRR4302540.5239213/1‑94 (MQ=60)
                                GAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTG                                                               <  SRR4302540.8830929/94‑1 (MQ=60)
                                GAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTG                                                               >  SRR4302540.10017748/1‑94 (MQ=60)
                                  AGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCC                                                             <  SRR4302540.8037463/94‑1 (MQ=60)
                                  AGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCC                                                             >  SRR4302540.115302/1‑94 (MQ=60)
                                   GCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTTCTGCCA                                                            >  SRR4302540.4028091/1‑94 (MQ=60)
                                    CCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAG                                                           >  SRR4302540.2058599/1‑94 (MQ=60)
                                    CCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAG                                                           >  SRR4302540.2786357/1‑94 (MQ=60)
                                    CCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAG                                                           >  SRR4302540.4339397/1‑94 (MQ=60)
                                     CGGTTAAGCGAAGTTGACCCCGATCTCATTACCAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGA                                                          >  SRR4302540.4318421/1‑94 (MQ=60)
                                      GGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGAC                                                         >  SRR4302540.4707181/1‑94 (MQ=60)
                                      GGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGAC                                                         >  SRR4302540.540266/1‑94 (MQ=60)
                                      GGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGAC                                                         >  SRR4302540.5006899/1‑94 (MQ=60)
                                      GGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGCGTATATTTCCTGCCAGAC                                                         >  SRR4302540.10140668/1‑94 (MQ=60)
                                       GTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACT                                                        <  SRR4302540.6584977/94‑1 (MQ=60)
                                       GTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACT                                                        <  SRR4302540.8290284/94‑1 (MQ=60)
                                          AAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGG                                                     >  SRR4302540.5472888/1‑94 (MQ=60)
                                           AGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGT                                                    >  SRR4302540.5238336/1‑94 (MQ=60)
                                           AGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGT                                                    <  SRR4302540.6094748/94‑1 (MQ=60)
                                           AGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGT                                                    >  SRR4302540.8284383/1‑94 (MQ=60)
                                           AGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGT                                                    >  SRR4302540.187508/1‑94 (MQ=60)
                                               AAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAA                                                <  SRR4302540.2008985/94‑1 (MQ=60)
                                               AAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAA                                                <  SRR4302540.3761782/94‑1 (MQ=60)
                                                AGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAAC                                               >  SRR4302540.7516860/1‑94 (MQ=60)
                                                 GTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACA                                              >  SRR4302540.7625812/1‑94 (MQ=60)
                                                 GTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACA                                              <  SRR4302540.7765507/94‑1 (MQ=60)
                                                  TTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACAT                                             <  SRR4302540.5878321/94‑1 (MQ=60)
                                                  TTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACAT                                             >  SRR4302540.8118729/1‑94 (MQ=60)
                                                   TGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATG                                            >  SRR4302540.4195179/1‑94 (MQ=60)
                                                   TGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATG                                            <  SRR4302540.42845/94‑1 (MQ=60)
                                                    GACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGC                                           >  SRR4302540.10075113/1‑94 (MQ=60)
                                                     ACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCA                                          <  SRR4302540.1357958/94‑1 (MQ=60)
                                                     ACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCA                                          <  SRR4302540.1204786/94‑1 (MQ=60)
                                                     ACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCA                                          >  SRR4302540.309781/1‑94 (MQ=60)
                                                      CCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGtttaacattgcca                                         >  SRR4302540.4110333/1‑81 (MQ=60)
                                                      CCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCAC                                         <  SRR4302540.7917209/94‑1 (MQ=60)
                                                      CCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCAC                                         >  SRR4302540.4086777/1‑94 (MQ=60)
                                                       CCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACA                                        <  SRR4302540.3794653/94‑1 (MQ=60)
                                                       CCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACA                                        <  SRR4302540.4565103/94‑1 (MQ=60)
                                                        CCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAG                                       <  SRR4302540.9112367/94‑1 (MQ=60)
                                                        CCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAG                                       >  SRR4302540.8640282/1‑94 (MQ=60)
                                                        CCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAG                                       >  SRR4302540.1235577/1‑94 (MQ=60)
                                                         CGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGG                                      >  SRR4302540.3260653/1‑94 (MQ=60)
                                                         CGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGG                                      >  SRR4302540.5961761/1‑94 (MQ=60)
                                                          GATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGC                                     >  SRR4302540.8960673/1‑94 (MQ=60)
                                                          GATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGC                                     >  SRR4302540.6691374/1‑94 (MQ=60)
                                                          GATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGC                                     <  SRR4302540.5098614/94‑1 (MQ=60)
                                                          GATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGC                                     >  SRR4302540.3393247/1‑94 (MQ=60)
                                                          GACCTGATTACAAAGTAAAGGATGTGTGAGCTTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCGAGACTTGGTTAAACATGCACAGGC                                     <  SRR4302540.5098615/94‑1 (MQ=60)
                                                           ATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCT                                    <  SRR4302540.2993028/94‑1 (MQ=60)
                                                           ATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCT                                    >  SRR4302540.482731/1‑94 (MQ=60)
                                                           ATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCT                                    <  SRR4302540.1110682/94‑1 (MQ=60)
                                                             CTCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCA                                  >  SRR4302540.9344405/1‑94 (MQ=60)
                                                             CTAATTACAAAGTAAAGGAGGTGTAAGCCTGGCTTTAAGATTATTCATTTCGTGTAAATTTCCTGCAAGACTTGGTT‑AACATGCACAGGCTCAG                                 <  SRR4302540.441794/94‑1 (MQ=60)
                                                              TCATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAG                                 <  SRR4302540.7687496/94‑1 (MQ=60)
                                                               CATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGG                                <  SRR4302540.5892008/94‑1 (MQ=60)
                                                               CATTACAAAGTAAAGGATGTGTAAGCCTGGCCTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGG                                >  SRR4302540.4444482/1‑94 (MQ=60)
                                                                ATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACCTGCACAGGCTCAGGT                               >  SRR4302540.2574964/1‑94 (MQ=60)
                                                                ATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGT                               <  SRR4302540.8327222/94‑1 (MQ=60)
                                                                ATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGT                               >  SRR4302540.3979205/1‑94 (MQ=60)
                                                                ATTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGT                               >  SRR4302540.8071697/1‑94 (MQ=60)
                                                                 TTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTA                              >  SRR4302540.9839088/1‑94 (MQ=60)
                                                                 TTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTA                              <  SRR4302540.8809937/94‑1 (MQ=60)
                                                                 TTACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTA                              <  SRR4302540.7247294/94‑1 (MQ=60)
                                                                  TACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCTTGTATATTTCCTGCCAGACTTGGTTAAACATGCCCAGGCTCAGGTAA                             >  SRR4302540.8728978/1‑94 (MQ=60)
                                                                  TACAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAA                             <  SRR4302540.3171016/94‑1 (MQ=60)
                                                                    CAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATG                           >  SRR4302540.9483084/1‑94 (MQ=60)
                                                                    CAAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATG                           >  SRR4302540.1981634/1‑94 (MQ=60)
                                                                    CAAAGTAAAGGATGTATAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATG                           <  SRR4302540.9059586/94‑1 (MQ=60)
                                                                     AAAGTAAAGGATGTGTAAGCCTGGCTTTCAGCTTATTAATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGA                          >  SRR4302540.9130179/1‑94 (MQ=60)
                                                                     AAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGA                          <  SRR4302540.3131543/94‑1 (MQ=60)
                                                                     AAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGA                          >  SRR4302540.500243/1‑94 (MQ=60)
                                                                     AAAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGA                          >  SRR4302540.9130178/1‑94 (MQ=60)
                                                                      AAGTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGAT                         >  SRR4302540.6575609/1‑94 (MQ=60)
                                                                        GTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTC                       <  SRR4302540.2613326/94‑1 (MQ=60)
                                                                        GTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTC                       <  SRR4302540.7965648/94‑1 (MQ=60)
                                                                        GTAAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTC                       <  SRR4302540.670754/94‑1 (MQ=60)
                                                                         TAAAGGATGTGTAAGCCTGGCTTTCAGCTTATTCATTTCGTGTATCTTTCCTGCCAGACTTGGTTAAACATGCAACGACTCAGGTAATGATTCG                      >  SRR4302540.2947066/1‑94 (MQ=60)
                                                                          AAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGC                     >  SRR4302540.5318557/1‑94 (MQ=60)
                                                                          AAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGC                     >  SRR4302540.5318558/1‑94 (MQ=60)
                                                                          AAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGC                     >  SRR4302540.6833596/1‑94 (MQ=60)
                                                                          AAAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGC                     >  SRR4302540.6833597/1‑94 (MQ=60)
                                                                           AAGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCA                    >  SRR4302540.706226/1‑94 (MQ=60)
                                                                            AGGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAA                   >  SRR4302540.7838379/1‑94 (MQ=60)
                                                                             GGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAG                  >  SRR4302540.5960336/1‑94 (MQ=60)
                                                                             GGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAG                  <  SRR4302540.2106544/94‑1 (MQ=60)
                                                                             GGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAG                  >  SRR4302540.2334894/1‑94 (MQ=60)
                                                                             GGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAG                  <  SRR4302540.2628911/94‑1 (MQ=60)
                                                                             GGATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAG                  >  SRR4302540.5899023/1‑94 (MQ=60)
                                                                              GATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGT                 >  SRR4302540.3327569/1‑94 (MQ=60)
                                                                              GATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGT                 >  SRR4302540.6631568/1‑94 (MQ=60)
                                                                               ATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTTTATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTA                >  SRR4302540.5519780/1‑94 (MQ=60)
                                                                               ATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTA                >  SRR4302540.9862968/1‑94 (MQ=60)
                                                                               ATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTA                >  SRR4302540.3952335/1‑94 (MQ=60)
                                                                               ATGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTG‑CAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTAT               >  SRR4302540.3689257/1‑94 (MQ=60)
                                                                                TGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTAT               <  SRR4302540.7982306/94‑1 (MQ=60)
                                                                                TGTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTAT               >  SRR4302540.2194982/1‑94 (MQ=60)
                                                                                 GTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATT              >  SRR4302540.8316191/1‑94 (MQ=60)
                                                                                 GTGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATT              <  SRR4302540.4117667/94‑1 (MQ=60)
                                                                                  TGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCTAGTATTG             <  SRR4302540.5051610/94‑1 (MQ=60)
                                                                                  TGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTG             >  SRR4302540.6885071/1‑94 (MQ=60)
                                                                                  TGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTG             >  SRR4302540.7503219/1‑94 (MQ=60)
                                                                                  TGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTG             >  SRR4302540.4920931/1‑94 (MQ=60)
                                                                                  TGTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTG             <  SRR4302540.2861434/94‑1 (MQ=60)
                                                                                   GTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGG            >  SRR4302540.7873312/1‑94 (MQ=60)
                                                                                   GTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGG            >  SRR4302540.100159/1‑94 (MQ=60)
                                                                                   GTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGG            >  SRR4302540.6842409/1‑94 (MQ=60)
                                                                                   GTAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGG            <  SRR4302540.5436332/94‑1 (MQ=60)
                                                                                    TAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGGT           >  SRR4302540.4641816/1‑94 (MQ=60)
                                                                                    TAAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGGT           >  SRR4302540.9559829/1‑94 (MQ=60)
                                                                                     AAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGGTG          >  SRR4302540.3142326/1‑94 (MQ=60)
                                                                                     AAGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGGTG          <  SRR4302540.6197983/94‑1 (MQ=60)
                                                                                      AGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGGTGG         >  SRR4302540.8301047/1‑94 (MQ=60)
                                                                                      AGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGGTGG         >  SRR4302540.5602140/1‑94 (MQ=60)
                                                                                      AGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGGTGG         >  SRR4302540.5904321/1‑94 (MQ=60)
                                                                                      AGCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGGTGG         >  SRR4302540.606377/1‑94 (MQ=60)
                                                                                       GCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGGTGGC        <  SRR4302540.6564980/94‑1 (MQ=60)
                                                                                       GCCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGGTGGC        >  SRR4302540.7172644/1‑94 (MQ=60)
                                                                                        CCTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGGTGGCT       >  SRR4302540.1354202/1‑94 (MQ=60)
                                                                                         CTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGGTGGCTC      >  SRR4302540.3270617/1‑94 (MQ=60)
                                                                                         CTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGGTGGCTC      >  SRR4302540.5563146/1‑94 (MQ=60)
                                                                                         CTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGGTGGCTC      >  SRR4302540.5563144/1‑94 (MQ=60)
                                                                                         CTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGGTGGCTC      >  SRR4302540.7556385/1‑94 (MQ=60)
                                                                                         CTGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGGTGGCTC      >  SRR4302540.4379121/1‑94 (MQ=60)
                                                                                          TGGCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGGTGGCTCG     <  SRR4302540.107218/94‑1 (MQ=60)
                                                                                            GCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGGTGGCTCGTC   <  SRR4302540.8460390/94‑1 (MQ=60)
                                                                                            GCTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACAAGCACAGGCTCAGGTAATGATTCGCAAGTATTGGTGGCTCGTC   >  SRR4302540.9960714/1‑94 (MQ=60)
                                                                                             CTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGGTGGCTCGTCG  >  SRR4302540.6471712/1‑94 (MQ=60)
                                                                                             CTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGGTGGCTCGTCG  >  SRR4302540.942001/1‑94 (MQ=60)
                                                                                             CTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGGTGGCTCGTCG  >  SRR4302540.3606994/1‑94 (MQ=60)
                                                                                             CTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGGTGGCTCGTCG  >  SRR4302540.1728979/1‑94 (MQ=60)
                                                                                             |                                                                                             
GAAAAAAAGAAAGACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAAAGGATGTGTAAGCCTGGTTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTAAACATGCACAGGCTCAGGTAATGATTCGCAAGTATTGGTGGCTCGTCG  >  NC_000913/3410099‑3410285

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑