Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,430,453	+C	coding (745/747 nt)	smf ←	putative Rossmann‑fold nucleotide‑binding protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,430,453	1	.	C	99.7%	1083.6 / ‑4.7	337	coding (745/747 nt)	smf	putative Rossmann‑fold nucleotide‑binding protein
Reads supporting (aligned to +/- strand): ref base . (1/0); new base C (180/156); total (181/156)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 391 total aligned reads displayed.

GAATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑AAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTT  >  NC_000913/3430361‑3430539

  aTTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAggca                                                                                       >  1:7419238/1‑91 (MQ=255)

   tttCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTggcaagg‑caa                                                                                     <  1:1470401/93‑1 (MQ=255)

   tttCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTggcaagg‑caa                                                                                     >  2:1594982/1‑93 (MQ=255)

   tttCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTggcaagg‑caa                                                                                     >  1:5871248/1‑93 (MQ=255)

    ttcttcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑caaa                                                                                    >  2:7081470/1‑93 (MQ=255)

     tcttcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑caaaa                                                                                   >  2:6340427/1‑93 (MQ=255)

     tcttcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑caaaa                                                                                   <  1:4336027/93‑1 (MQ=255)

      cttcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑caaaaa                                                                                  <  2:1752789/93‑2 (MQ=255)

       ttcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCTGGATTCCCTATTGGACCTGGCAAGG‑caaaaac                                                                                 >  1:459061/1‑91 (MQ=255)

       ttcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑caaaaac                                                                                 <  1:7713229/93‑3 (MQ=255)

        tcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACt                                                                                 >  1:7884954/1‑93 (MQ=255)

           ggTTCCGTCACAAGAATCGCTCCTTGTTTTATTAAGCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACctct                                                                              <  2:893924/93‑1 (MQ=255)

           ggTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTtct                                                                              >  2:3323708/1‑93 (MQ=255)

           ggTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTtct                                                                              <  1:3002822/93‑1 (MQ=255)

           ggTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTtct                                                                              <  2:6256801/93‑1 (MQ=255)

           ggTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCATATTGGACCTGGCAAGGCAAAAACTtct                                                                              <  1:4758788/93‑1 (MQ=255)

            gTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTtctc                                                                             >  2:6867177/1‑93 (MQ=255)

            gTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGACCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTtctc                                                                             >  1:7646387/1‑93 (MQ=255)

               ccGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGcc                                                                          >  1:7058760/1‑93 (MQ=255)

                 gTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGcccc                                                                        <  2:8739242/93‑1 (MQ=255)

                  tCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCt                                                                       >  2:7340497/1‑93 (MQ=255)

                   cacaAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTg                                                                      >  1:5131259/1‑93 (MQ=255)

                    acaAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGc                                                                     <  2:6592564/93‑1 (MQ=255)

                    acaAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGc                                                                     >  1:8307861/1‑93 (MQ=255)

                      aaGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTc                                                                   <  2:807984/93‑1 (MQ=255)

                         aaTCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAg                                                                >  1:5610114/1‑93 (MQ=255)

                          aTCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAgc                                                               <  1:5321994/93‑1 (MQ=255)

                          aTCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAgc                                                               <  1:6666895/93‑1 (MQ=255)

                          aTCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAgc                                                               <  2:818360/93‑1 (MQ=255)

                             gCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGca                                                            <  2:7410838/93‑1 (MQ=255)

                              cACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGcaa                                                           >  1:6026409/1‑92 (MQ=255)

                               cccTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGcaca                                                          <  1:2033713/92‑1 (MQ=255)

                               aCCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGcaca                                                          >  2:2976953/1‑93 (MQ=255)

                                ccTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACaa                                                         >  2:1280505/1‑93 (MQ=255)

                                ccTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACaa                                                         <  1:4979620/93‑1 (MQ=255)

                                 cTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAAc                                                        >  2:4239191/1‑93 (MQ=255)

                                 cTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAAc                                                        >  2:4773565/1‑93 (MQ=255)

                                  ttGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACg                                                       >  1:4641278/1‑93 (MQ=255)

                                  ttGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACg                                                       <  2:8397710/93‑1 (MQ=255)

                                     ttttATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGc                                                    <  1:3286255/93‑1 (MQ=255)

                                     ttttATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGc                                                    >  1:4072472/1‑93 (MQ=255)

                                      tttATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCt                                                   >  2:9442811/1‑93 (MQ=255)

                                         attaACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTc                                                >  1:3836947/1‑93 (MQ=255)

                                          ttaACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCa                                               <  2:2307819/93‑1 (MQ=255)

                                          ttaACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCa                                               <  1:1306918/93‑1 (MQ=255)

                                          ttaACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCa                                               >  1:7263050/1‑93 (MQ=255)

                                          ttaACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCa                                               <  1:1542715/93‑1 (MQ=255)

                                            aaCCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCAcc                                             <  2:3501136/93‑1 (MQ=255)

                                            aaCCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCAcc                                             <  2:8613721/93‑1 (MQ=255)

                                            aaCCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCAcc                                             <  1:4478588/93‑1 (MQ=255)

                                            aaCCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCAcc                                             >  1:2551782/1‑93 (MQ=255)

                                              ccAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAg                                           <  2:2544275/93‑1 (MQ=255)

                                               cAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGc                                          >  1:6327780/1‑93 (MQ=255)

                                                cgTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTTCTGTCACCAGCg                                         <  2:2656155/92‑1 (MQ=255)

                                                aGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCg                                         <  2:5997483/93‑1 (MQ=255)

                                                 gTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGa                                        >  1:8493748/1‑93 (MQ=255)

                                                  tGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGaa                                       >  1:9329257/1‑93 (MQ=255)

                                                  tGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGaa                                       <  1:9259167/93‑1 (MQ=255)

                                                  tGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGaa                                       <  2:7877683/93‑1 (MQ=255)

                                                   gAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAAc                                      >  2:7560211/1‑93 (MQ=255)

                                                   gAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAAc                                      >  1:2491938/1‑93 (MQ=255)

                                                   gAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAAc                                      <  2:9150221/93‑1 (MQ=255)

                                                    aGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAAcc                                     <  2:5227787/93‑1 (MQ=255)

                                                     ggCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCa                                    >  2:2379338/1‑93 (MQ=255)

                                                       cccTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACt                                  <  2:2873448/93‑1 (MQ=255)

                                                       cccTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACt                                  >  2:1865166/1‑93 (MQ=255)

                                                        ccTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTa                                 <  1:6407373/93‑1 (MQ=255)

                                                         cTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAc                                <  1:9139859/93‑1 (MQ=255)

                                                         cTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAc                                >  2:4957598/1‑93 (MQ=255)

                                                         cTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAc                                <  2:7670937/93‑1 (MQ=255)

                                                           tCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGc                              >  1:3603750/1‑93 (MQ=255)

                                                             tcTTCTCGGTTTCCCAATTGCACCTGGTACGGCATAAACTTCTCGGCCCTGCTCAAGCGCACAACGCGCTCTCACCACGTAACTACTACGCaa                            >  2:3230913/2‑93 (MQ=255)

                                                             gCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCaa                            <  1:868692/93‑1 (MQ=255)

                                                              cTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCaaa                           <  2:5883173/93‑1 (MQ=255)

                                                               ttCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAg                          <  1:9505524/93‑1 (MQ=255)

                                                               ttCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAAGCAAAg                          >  1:217936/1‑93 (MQ=255)

                                                                tCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGc                         >  2:3829768/1‑93 (MQ=255)

                                                                 cccGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGcc                        <  1:8075988/93‑1 (MQ=255)

                                                                 cccGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGcc                        <  2:649829/93‑1 (MQ=255)

                                                                 cccGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGcc                        <  2:5572504/93‑1 (MQ=255)

                                                                  ccGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTTCTGTCACCAGCGAACCACTACGCAAAGCCg                       <  1:674404/93‑1 (MQ=255)

                                                                  ccGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCg                       >  1:1788947/1‑93 (MQ=255)

                                                                   cGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGc                      >  1:1948665/1‑93 (MQ=255)

                                                                      aTTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTc                   <  1:1057641/93‑1 (MQ=255)

                                                                       ttCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTcc                  >  2:9550776/1‑93 (MQ=255)

                                                                       ttCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTcc                  >  2:1069446/1‑93 (MQ=255)

                                                                       ttCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTcc                  <  1:5237985/93‑1 (MQ=255)

                                                                         cccTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccac                >  2:9884090/1‑93 (MQ=255)

                                                                            tATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccaccac             >  2:441925/1‑93 (MQ=255)

                                                                            tATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccaccac             >  1:980013/1‑93 (MQ=255)

                                                                              ttGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTTCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccaccacca           <  2:10022429/93‑1 (MQ=255)

                                                                              ttGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccaccacca           >  2:6095757/1‑93 (MQ=255)

                                                                              ttGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccaccacca           >  2:2076817/1‑93 (MQ=255)

                                                                              ttGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccaccacca           >  2:9063395/1‑93 (MQ=255)

                                                                                ggACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGt         <  2:8918755/93‑1 (MQ=255)

                                                                                 gACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTa        <  2:5734813/93‑1 (MQ=255)

                                                                                   ccTGGCAAGGCAAAACCTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTaca      <  1:5542845/93‑1 (MQ=255)

                                                                                    cTGGCAAGGCAAAACCTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTacac     <  2:2010228/93‑1 (MQ=255)

                                                                                      ggcaaggcaaAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCt   >  1:9947161/1‑93 (MQ=255)

                                                                                      ggcaaggcaaAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCt   <  1:8438919/93‑1 (MQ=255)

GAATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑AAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTT  >  NC_000913/3430361‑3430539

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 206 total aligned reads displayed.

AATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑AAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTACTTAG  >  NC_000913/3430362‑3430546

AATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑CA                                                                                             <  SRR4302540.4962216/94‑1 (MQ=60)

AATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑CA                                                                                             <  SRR4302540.211863/94‑1 (MQ=60)

AATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑CA                                                                                             >  SRR4302540.7501875/1‑94 (MQ=60)

AATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑CA                                                                                             >  SRR4302540.4546931/1‑94 (MQ=60)

AATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑CA                                                                                             >  SRR4302540.8587240/1‑94 (MQ=60)

 ATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑CAA                                                                                            >  SRR4302540.5936147/1‑94 (MQ=60)

 ATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑CAA                                                                                            >  SRR4302540.9525340/1‑94 (MQ=60)

 ATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑CAA                                                                                            >  SRR4302540.4495722/1‑94 (MQ=60)

  TTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑CAAA                                                                                           <  SRR4302540.3283153/94‑1 (MQ=60)

  TTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑CAAA                                                                                           >  SRR4302540.6809093/1‑94 (MQ=60)

  TTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑CAAA                                                                                           <  SRR4302540.1486469/94‑1 (MQ=60)

  TTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑CAAA                                                                                           <  SRR4302540.1486470/94‑1 (MQ=60)

   TTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑CAAAA                                                                                          >  SRR4302540.1930070/1‑94 (MQ=60)

    TCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAA                                                                                          <  SRR4302540.4383230/94‑1 (MQ=60)

    TCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAA                                                                                          <  SRR4302540.153143/94‑1 (MQ=60)

     CTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCTGGATTCCCTATTGGACCTGGCAAGGCAAAAAC                                                                                         >  SRR4302540.463963/1‑94 (MQ=60)

     CTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAAC                                                                                         <  SRR4302540.1365761/94‑1 (MQ=60)

     CTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAAC                                                                                         <  SRR4302540.1654284/94‑1 (MQ=60)

     CTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAAC                                                                                         >  SRR4302540.3076499/1‑94 (MQ=60)

     CTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAAC                                                                                         <  SRR4302540.6032827/94‑1 (MQ=60)

      TTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACT                                                                                        >  SRR4302540.7977012/1‑94 (MQ=60)

      TTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACT                                                                                        <  SRR4302540.7802065/94‑1 (MQ=60)

        CCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTC                                                                                      >  SRR4302540.4544885/1‑94 (MQ=60)

          GGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCTCTATTGGACCTGGCAAGGCAAAAACTTCTC                                                                                    <  SRR4302540.4397341/94‑1 (MQ=60)

          GGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTC                                                                                    >  SRR4302540.5019320/1‑94 (MQ=60)

          GGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTC                                                                                    <  SRR4302540.677767/94‑1 (MQ=60)

          GGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTC                                                                                    <  SRR4302540.3035891/94‑1 (MQ=60)

          GGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTC                                                                                    >  SRR4302540.72852/1‑94 (MQ=60)

          GGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCATATTGGACCTGGCAAGGCAAAAACTTCTC                                                                                    <  SRR4302540.4809567/94‑1 (MQ=60)

          GGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGACCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTC                                                                                    >  SRR4302540.7732454/1‑94 (MQ=60)

           GTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG                                                                                   <  SRR4302540.5621943/94‑1 (MQ=60)

           GTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG                                                                                   <  SRR4302540.5895046/94‑1 (MQ=60)

             TCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCC                                                                                 >  SRR4302540.784221/1‑94 (MQ=60)

             TCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCC                                                                                 <  SRR4302540.4187192/94‑1 (MQ=60)

             TCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCC                                                                                 <  SRR4302540.4187193/94‑1 (MQ=60)

             TCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCC                                                                                 >  SRR4302540.7137262/1‑94 (MQ=60)

              CCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCC                                                                                >  SRR4302540.1934064/1‑94 (MQ=60)

               CGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCC                                                                               <  SRR4302540.8623784/94‑1 (MQ=60)

                GTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCT                                                                              <  SRR4302540.6417450/94‑1 (MQ=60)

                 TCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAACCTTCTCGCCCCTC                                                                             >  SRR4302540.2167916/1‑94 (MQ=60)

                 TCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTG                                                                             >  SRR4302540.5186833/1‑94 (MQ=60)

                 TCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTG                                                                             <  SRR4302540.1129424/94‑1 (MQ=60)

                 TCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTG                                                                             >  SRR4302540.9281111/1‑94 (MQ=60)

                  CACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGC                                                                            <  SRR4302540.5142877/94‑1 (MQ=60)

                  CACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGC                                                                            >  SRR4302540.8404318/1‑94 (MQ=60)

                   ACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCT                                                                           <  SRR4302540.3969291/94‑1 (MQ=60)

                   ACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCT                                                                           <  SRR4302540.7521173/94‑1 (MQ=60)

                   ACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCT                                                                           >  SRR4302540.3679899/1‑94 (MQ=60)

                     AAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAGCTTCTCGCCCCTGCTCA                                                                         >  SRR4302540.7436056/1‑94 (MQ=60)

                     AAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCA                                                                         >  SRR4302540.7436058/1‑94 (MQ=60)

                     AAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCA                                                                         >  SRR4302540.9673903/1‑94 (MQ=60)

                     AAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCA                                                                         >  SRR4302540.3768566/1‑94 (MQ=60)

                      AGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAA                                                                        >  SRR4302540.356751/1‑94 (MQ=60)

                      AGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAA                                                                        >  SRR4302540.5591610/1‑94 (MQ=60)

                       GAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAG                                                                       <  SRR4302540.1539136/94‑1 (MQ=60)

                       GAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAG                                                                       >  SRR4302540.5671831/1‑94 (MQ=60)

                        AATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGC                                                                      <  SRR4302540.8507278/94‑1 (MQ=60)

                        AATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGC                                                                      <  SRR4302540.7952423/94‑1 (MQ=60)

                        AATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGC                                                                      >  SRR4302540.812686/1‑94 (MQ=60)

                         ATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCG                                                                     <  SRR4302540.6740575/94‑1 (MQ=60)

                         ATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCG                                                                     >  SRR4302540.2746363/1‑94 (MQ=60)

                         ATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCG                                                                     >  SRR4302540.958854/1‑94 (MQ=60)

                           CGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCA                                                                   <  SRR4302540.1703588/94‑1 (MQ=60)

                            GCACCTTGTTTTATTACCCAGTGAGGCCCTTCGATTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCAC                                                                  <  SRR4302540.9094764/94‑1 (MQ=60)

                            GCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCAC                                                                  >  SRR4302540.1334529/1‑94 (MQ=60)

                            GCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCAA                                                                  >  SRR4302540.6093279/1‑94 (MQ=60)

                             CACCTTGTTTTATTAACCAGCGAGGCCCTTCGCGCCCCGGATTCCCTAGTGGACCTGGCAAGGCAAAAACTTCTCGCCCCCGCTCAAGCGCACA                                                                 <  SRR4302540.10002767/94‑1 (MQ=60)

                              CCCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAA                                                                <  SRR4302540.2055651/94‑1 (MQ=60)

                              ACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAA                                                                >  SRR4302540.10007667/1‑94 (MQ=60)

                               CCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAAC                                                               <  SRR4302540.6852928/94‑1 (MQ=60)

                               CCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAAC                                                               <  SRR4302540.5033523/94‑1 (MQ=60)

                               CCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAAC                                                               >  SRR4302540.2552034/1‑94 (MQ=60)

                                CTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACG                                                              >  SRR4302540.9207430/1‑94 (MQ=60)

                                CTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACG                                                              >  SRR4302540.4690973/1‑94 (MQ=60)

                                 TTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGT                                                             >  SRR4302540.5865903/1‑94 (MQ=60)

                                   GTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGC                                                           >  SRR4302540.4116370/1‑94 (MQ=60)

                                    TTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCT                                                          <  SRR4302540.1167073/94‑1 (MQ=60)

                                    TTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCT                                                          <  SRR4302540.3322187/94‑1 (MQ=60)

                                     TTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTG                                                         >  SRR4302540.3911207/1‑94 (MQ=60)

                                     TTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTG                                                         <  SRR4302540.5430666/94‑1 (MQ=60)

                                      TTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCGAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGC                                                        >  SRR4302540.2565973/1‑94 (MQ=60)

                                       TATTAACTAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTC                                                       >  SRR4302540.6694970/1‑94 (MQ=60)

                                       TATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTC                                                       >  SRR4302540.3878683/1‑94 (MQ=60)

                                        TTTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCA                                                      <  SRR4302540.7788413/94‑1 (MQ=60)

                                        ATTAACCAGTGAGGCTCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAATCTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCA                                                      <  SRR4302540.30667/94‑1 (MQ=60)

                                        ATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCA                                                      >  SRR4302540.7344094/1‑94 (MQ=60)

                                         TTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCAC                                                     <  SRR4302540.1320481/94‑1 (MQ=60)

                                         TTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCAC                                                     <  SRR4302540.1559753/94‑1 (MQ=60)

                                          TAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACC                                                    >  SRR4302540.2579287/1‑94 (MQ=60)

                                          TAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACC                                                    <  SRR4302540.9295004/94‑1 (MQ=60)

                                           AACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCA                                                   <  SRR4302540.4527161/94‑1 (MQ=60)

                                           AACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCA                                                   <  SRR4302540.5136572/94‑1 (MQ=60)

                                           AACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCA                                                   <  SRR4302540.7059415/94‑1 (MQ=60)

                                            ACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAG                                                  >  SRR4302540.2467509/1‑94 (MQ=60)

                                            ACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAG                                                  >  SRR4302540.8113607/1‑94 (MQ=60)

                                            ACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAG                                                  >  SRR4302540.5207936/1‑94 (MQ=60)

                                             CCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGC                                                 >  SRR4302540.6398245/1‑94 (MQ=60)

                                               AGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGA                                               >  SRR4302540.8592444/1‑94 (MQ=60)

                                               AGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGA                                               >  SRR4302540.3446080/1‑94 (MQ=60)

                                               AGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGA                                               >  SRR4302540.1488112/1‑94 (MQ=60)

                                               AGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGA                                               >  SRR4302540.8592445/1‑94 (MQ=60)

                                                GTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAA                                              >  SRR4302540.9440505/1‑94 (MQ=60)

                                                GTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAA                                              >  SRR4302540.2558527/1‑94 (MQ=60)

                                                 TGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAAC                                             <  SRR4302540.6759148/94‑1 (MQ=60)

                                                 TGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAAC                                             <  SRR4302540.9369943/94‑1 (MQ=60)

                                                 TGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAAC                                             >  SRR4302540.2518779/1‑94 (MQ=60)

                                                 TGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAAC                                             <  SRR4302540.8595342/94‑1 (MQ=60)

                                                   AGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCA                                           >  SRR4302540.2035893/1‑94 (MQ=60)

                                                   AGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCA                                           >  SRR4302540.5655535/1‑94 (MQ=60)

                                                    GGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCAC                                          <  SRR4302540.7606712/94‑1 (MQ=60)

                                                       CCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAC                                       <  SRR4302540.6478687/94‑1 (MQ=60)

                                                       CCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAC                                       >  SRR4302540.2858549/1‑94 (MQ=60)

                                                       CCTGCGCTTCCCGGTTTCCCTATTGGACCTGGCAAGGCAAAAGCTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAC                                       <  SRR4302540.7740302/94‑1 (MQ=60)

                                                        CTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACG                                      <  SRR4302540.5319764/94‑1 (MQ=60)

                                                        CTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACG                                      >  SRR4302540.4090507/1‑94 (MQ=60)

                                                        CTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACG                                      <  SRR4302540.9249667/94‑1 (MQ=60)

                                                        CTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACG                                      >  SRR4302540.9804828/1‑94 (MQ=60)

                                                         TTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGC                                     >  SRR4302540.3643128/1‑94 (MQ=60)

                                                          TCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCA                                    <  SRR4302540.172752/94‑1 (MQ=60)

                                                           CGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAA                                   <  SRR4302540.7272748/94‑1 (MQ=60)

                                                           CGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAA                                   >  SRR4302540.4522409/1‑94 (MQ=60)

                                                            GCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAA                                  <  SRR4302540.877909/94‑1 (MQ=60)

                                                            GCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAA                                  >  SRR4302540.9373179/1‑94 (MQ=60)

                                                             CTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAG                                 <  SRR4302540.788575/94‑1 (MQ=60)

                                                             CTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAG                                 <  SRR4302540.5429823/94‑1 (MQ=60)

                                                             CTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAG                                 >  SRR4302540.5123585/1‑94 (MQ=60)

                                                             CTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAG                                 >  SRR4302540.220055/1‑94 (MQ=60)

                                                             CTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAG                                 >  SRR4302540.1990045/1‑94 (MQ=60)

                                                             CTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAAGCAAAG                                 >  SRR4302540.220056/1‑94 (MQ=60)

                                                              TTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGC                                >  SRR4302540.764778/1‑94 (MQ=60)

                                                              TTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGC                                <  SRR4302540.9618145/94‑1 (MQ=60)

                                                               TCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCC                               <  SRR4302540.8887995/94‑1 (MQ=60)

                                                                CCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCG                              <  SRR4302540.8169708/94‑1 (MQ=60)

                                                                CCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCG                              <  SRR4302540.5003351/94‑1 (MQ=60)

                                                                CCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCG                              >  SRR4302540.1808392/1‑94 (MQ=60)

                                                                 CCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTTCTGTCACCAGCGAACCACTACGCAAAGCCGC                             <  SRR4302540.681627/94‑1 (MQ=60)

                                                                 CCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGC                             >  SRR4302540.1969871/1‑94 (MQ=60)

                                                                  CGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCT                            >  SRR4302540.4771528/1‑94 (MQ=60)

                                                                   GGATTCCCTATTGGACCTGGCAAGGCAAAAGCTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTT                           <  SRR4302540.6015652/94‑1 (MQ=60)

                                                                   GGATTCCCTATTGGACCTGGCAAGGCAAAACCTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTT                           <  SRR4302540.7305522/94‑1 (MQ=60)

                                                                   GGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTT                           <  SRR4302540.4680370/94‑1 (MQ=60)

                                                                   GGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTT                           >  SRR4302540.7780420/1‑94 (MQ=60)

                                                                   GGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTT                           >  SRR4302540.3860306/1‑94 (MQ=60)

                                                                   GGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTT                           >  SRR4302540.1872035/1‑94 (MQ=60)

                                                                     ATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCTCACAACGTGCTGTCCCCAGCGAGCCACTACGCAAAGCCGCTTCC                         <  SRR4302540.9720787/94‑1 (MQ=60)

                                                                     ATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCC                         <  SRR4302540.1068407/94‑1 (MQ=60)

                                                                      TTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCA                        <  SRR4302540.5295127/94‑1 (MQ=60)

                                                                      TTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCA                        <  SRR4302540.8298110/94‑1 (MQ=60)

                                                                       TCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAGCCACTACGCAAAGCCGCTTCCAC                       <  SRR4302540.8585523/94‑1 (MQ=60)

                                                                       TCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCAC                       <  SRR4302540.1006517/94‑1 (MQ=60)

                                                                       TCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCAC                       <  SRR4302540.8504439/94‑1 (MQ=60)

                                                                        CCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACC                      <  SRR4302540.6463771/94‑1 (MQ=60)

                                                                        CCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACC                      <  SRR4302540.6463772/94‑1 (MQ=60)

                                                                          CTATTGGACCTGGCAAGGCAAAAGCTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCAC                    >  SRR4302540.9386716/1‑94 (MQ=60)

                                                                          CTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCAC                    >  SRR4302540.8315915/1‑94 (MQ=60)

                                                                          CTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCAC                    >  SRR4302540.9466769/1‑94 (MQ=60)

                                                                          CTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCAC                    >  SRR4302540.4590570/1‑94 (MQ=60)

                                                                          CTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCAC                    >  SRR4302540.990051/1‑94 (MQ=60)

                                                                          CTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCAC                    <  SRR4302540.5318525/94‑1 (MQ=60)

                                                                          CTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCAC                    >  SRR4302540.5189057/1‑94 (MQ=60)

                                                                          CTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCAC                    >  SRR4302540.5189055/1‑94 (MQ=60)

                                                                          CTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCAC                    >  SRR4302540.4655186/1‑94 (MQ=60)

                                                                          CTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCATGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCAC                    <  SRR4302540.6354075/94‑1 (MQ=60)

                                                                           TATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACC                   >  SRR4302540.8013434/1‑94 (MQ=60)

                                                                           TATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACC                   <  SRR4302540.4679728/94‑1 (MQ=60)

                                                                            ATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCA                  >  SRR4302540.6563996/1‑94 (MQ=60)

                                                                             TTGGACCTGGCAAGGCAAAAACTTCACGCCCCTGCTCAAGCGCACAACGTTCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAG                 <  SRR4302540.10084447/94‑1 (MQ=60)

                                                                             ATGGACATGGCAAGGCAAAAAATTCTAGCCCCTGCTCAAGCGCACAACGTTCTGTCACCAGCGACCCACTACGCAAAGCCGCTTCCACCACCAG                 <  SRR4302540.2490474/94‑1 (MQ=60)

                                                                              TGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGT                <  SRR4302540.4806690/94‑1 (MQ=60)

                                                                               GGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTA               >  SRR4302540.2013558/1‑94 (MQ=60)

                                                                               GGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTA               >  SRR4302540.630745/1‑94 (MQ=60)

                                                                               GGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTA               >  SRR4302540.3002530/1‑94 (MQ=60)

                                                                               GGACCCGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTA               <  SRR4302540.8621024/94‑1 (MQ=60)

                                                                                 ACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACA             <  SRR4302540.6316574/94‑1 (MQ=60)

                                                                                  CCTGGCAAGGCAAAACCTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACAC            <  SRR4302540.5603899/94‑1 (MQ=60)

                                                                                  CCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTTCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACAC            <  SRR4302540.5603900/94‑1 (MQ=60)

                                                                                  CCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACAC            >  SRR4302540.5863503/1‑94 (MQ=60)

                                                                                  CCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACAC            >  SRR4302540.6560964/1‑94 (MQ=60)

                                                                                   CTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACC           >  SRR4302540.932827/1‑94 (MQ=60)

                                                                                   CTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGAACACC           >  SRR4302540.4724248/1‑94 (MQ=60)

                                                                                    TGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCT          >  SRR4302540.10063307/1‑94 (MQ=60)

                                                                                    TGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCT          <  SRR4302540.6063167/94‑1 (MQ=60)

                                                                                     GGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTT         <  SRR4302540.8536882/94‑1 (MQ=60)

                                                                                     GGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTT         <  SRR4302540.8445544/94‑1 (MQ=60)

                                                                                       CAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTTCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTA       <  SRR4302540.204381/94‑1 (MQ=60)

                                                                                       CAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCGCCACCAGTACACCTTTA       >  SRR4302540.4111722/1‑94 (MQ=60)

                                                                                       CAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTA       >  SRR4302540.2492289/1‑94 (MQ=60)

                                                                                       CAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTA       >  SRR4302540.7025331/1‑94 (MQ=60)

                                                                                        AAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTAC      >  SRR4302540.8078006/1‑94 (MQ=60)

                                                                                        AAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTAC      >  SRR4302540.6700682/1‑94 (MQ=60)

                                                                                        AAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTAC      >  SRR4302540.7984551/1‑94 (MQ=60)

                                                                                        AAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTAC      <  SRR4302540.3375459/94‑1 (MQ=60)

                                                                                        AAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTAC      <  SRR4302540.366353/94‑1 (MQ=60)

                                                                                        AAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTAC      >  SRR4302540.8138736/1‑94 (MQ=60)

                                                                                         AGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCGCCAGTACTCCTTTACT     <  SRR4302540.4975236/94‑1 (MQ=60)

                                                                                         AGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTACT     >  SRR4302540.8106883/1‑94 (MQ=60)

                                                                                          GC‑AAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTACTTA   >  SRR4302540.4292836/1‑94 (MQ=60)

                                                                                           C‑AAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTACTTAG  >  SRR4302540.3867748/1‑94 (MQ=60)

                                                                                           C‑AAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTACTTAG  >  SRR4302540.5531255/1‑94 (MQ=60)

                                                                                           C‑AAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTACTTAG  <  SRR4302540.9927395/94‑1 (MQ=60)

AATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑AAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTACTTAG  >  NC_000913/3430362‑3430546

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`