Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,450,109 G→A P152L (CCG→CTG)  rplC ← 50S ribosomal subunit protein L3

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,450,1090GA100.0% 1522.6 / NA 409P152L (CCG→CTG) rplC50S ribosomal subunit protein L3
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (224/185);  total (224/185)

Only 100 of 421 total aligned reads displayed.

GCGTCAACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCGGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAGCGCTTA  >  NC_000913/3450019‑3450198
                                                                                          |                                                                                         
gCGTCAACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGa                                                                                         <  1:4210442/93‑1 (MQ=255)
gCGTCAACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCAATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGa                                                                                         <  1:9875646/93‑1 (MQ=255)
 cttCAACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCagag                                                                                        <  2:8606553/91‑1 (MQ=255)
 cGTCAACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCagag                                                                                        <  1:1519668/93‑1 (MQ=255)
 cGTCAACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCagag                                                                                        <  1:3764385/93‑1 (MQ=255)
   tCAACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTc                                                                                      <  2:5822672/93‑1 (MQ=255)
    cAACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCt                                                                                     >  1:9997854/1‑93 (MQ=255)
     aaCGCGTACTACGTCAGGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTg                                                                                    <  2:4700509/93‑1 (MQ=255)
     aaCGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTg                                                                                    >  1:6379110/1‑93 (MQ=255)
      aCGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGGCCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTgg                                                                                   >  2:408091/1‑93 (MQ=255)
       cgcgTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGt                                                                                  <  2:8128302/93‑1 (MQ=255)
       cgcgTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGt                                                                                  >  1:3171683/1‑93 (MQ=255)
          gTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCt                                                                               >  2:1199951/1‑93 (MQ=255)
          gTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCt                                                                               >  1:1860480/1‑93 (MQ=255)
            actacGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGa                                                                             >  2:7930610/1‑93 (MQ=255)
            actacGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGa                                                                             <  2:161714/93‑1 (MQ=255)
             ctacGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGAc                                                                            <  1:8055404/93‑1 (MQ=255)
             ctaaGTCAAGGCTCTGACCGGTTACATGTGCTTTACCCTTCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGAc                                                                            <  1:1369195/93‑1 (MQ=255)
              tacGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGAcc                                                                           >  1:272104/1‑93 (MQ=255)
              tacGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGAcc                                                                           >  2:4221349/1‑93 (MQ=255)
                 gTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGAt                                                                        <  2:6388954/93‑1 (MQ=255)
                  tCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGACGACTTTGCCCAGAGTCTGGTTCTGACCGATa                                                                       >  2:7594601/1‑93 (MQ=255)
                  tCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATa                                                                       >  2:7455316/1‑93 (MQ=255)
                  tCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATa                                                                       <  1:7576342/93‑1 (MQ=255)
                   cAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAg                                                                      <  2:3594773/93‑1 (MQ=255)
                    aaGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGa                                                                     <  1:5488983/93‑1 (MQ=255)
                     aGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGaa                                                                    <  1:8804430/93‑1 (MQ=255)
                      ggCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAAc                                                                   >  2:6174650/1‑93 (MQ=255)
                      ggCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAAc                                                                   <  1:6782568/93‑1 (MQ=255)
                       gCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAAcc                                                                  <  1:6513885/93‑1 (MQ=255)
                         tctGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCg                                                                >  2:3413807/1‑93 (MQ=255)
                         tctGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCg                                                                >  1:7110964/1‑93 (MQ=255)
                            gAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGGTATAACCCGGaa                                                             >  1:5586961/1‑93 (MQ=255)
                            gAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGaa                                                             <  1:5900114/93‑1 (MQ=255)
                            gAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGaa                                                             <  2:9003169/93‑1 (MQ=255)
                             aaCGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAAc                                                            >  2:263175/1‑93 (MQ=255)
                               cGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAAcgc                                                          <  1:8501390/93‑1 (MQ=255)
                                ggTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGAGCGATAGAACCCGGAAcgcg                                                         >  1:8113479/1‑93 (MQ=255)
                                ggTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAAcgcg                                                         >  1:9136661/1‑93 (MQ=255)
                                 gTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCgg                                                        <  1:7838671/93‑1 (MQ=255)
                                 gTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCgg                                                        >  2:7163377/1‑93 (MQ=255)
                                  ttACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGt                                                       <  2:9366201/93‑1 (MQ=255)
                                  ttACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGt                                                       >  1:4583649/1‑93 (MQ=255)
                                  ttACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGt                                                       >  1:232518/1‑93 (MQ=255)
                                   tACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTg                                                      >  1:9427924/1‑93 (MQ=255)
                                         ttcgttACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACaa                                                <  1:1297473/93‑1 (MQ=255)
                                         ttcgttACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACaa                                                >  1:5760619/1‑93 (MQ=255)
                                         ttcgttACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACaa                                                >  1:8707139/1‑93 (MQ=255)
                                            gttACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGa                                             <  1:6103928/93‑1 (MQ=255)
                                             ttACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAAGCCGGAACGCGGTGAGACAAGGAg                                            >  2:5502284/1‑93 (MQ=255)
                                              tACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGt                                           <  1:9512752/93‑1 (MQ=255)
                                              tACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGt                                           <  2:3274218/93‑1 (MQ=255)
                                                cccATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTa                                         >  1:483179/1‑93 (MQ=255)
                                                cccATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTa                                         >  2:575906/1‑93 (MQ=255)
                                                cccATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTa                                         >  2:5419594/1‑93 (MQ=255)
                                                 ccATCTGCCCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTAc                                        <  1:828719/93‑1 (MQ=255)
                                                  cATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTAcc                                       <  2:2994753/93‑1 (MQ=255)
                                                  cATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTAcc                                       <  1:2577811/93‑1 (MQ=255)
                                                   aTCTGACCTGCCATTTTCTTGCCTTTGAACACTTTACCCAGAGTCTGGTTCTGACCGATAGAACACGGAACGCGGTGAGACAAGGAGTTAGCg                                      >  2:4618577/1‑93 (MQ=255)
                                                    tCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGt                                     >  2:669741/1‑93 (MQ=255)
                                                    tCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGt                                     >  2:10045103/1‑93 (MQ=255)
                                                     cTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTg                                    >  2:1410304/1‑93 (MQ=255)
                                                      tGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGa                                   <  1:3281491/93‑1 (MQ=255)
                                                      tGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGa                                   <  1:5379626/93‑1 (MQ=255)
                                                        aCCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGCGt                                 >  1:5001815/1‑93 (MQ=255)
                                                         ccTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTa                                <  2:6805845/93‑1 (MQ=255)
                                                         ccTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTa                                <  2:5106584/93‑1 (MQ=255)
                                                           tGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGc                              <  2:3682149/93‑1 (MQ=255)
                                                           tGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGACTTCCCGTgaggagg                              >  1:975968/1‑92 (MQ=255)
                                                               aTTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTcc                          <  1:4516152/93‑1 (MQ=255)
                                                                 tttCTTGCCTTTGAACCCTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGAAAAGGAGTTACCGTGAGTAGCGTCCTg                        <  2:4497591/93‑1 (MQ=255)
                                                                  ttCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTgg                       <  1:1064019/93‑1 (MQ=255)
                                                                   tCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTggg                      >  1:5824137/1‑93 (MQ=255)
                                                                   tCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGGTACCGTGAGTAGCGTCCTggg                      >  1:6282975/1‑93 (MQ=255)
                                                                    cTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGt                     >  2:2878704/1‑93 (MQ=255)
                                                                     ttGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTa                    >  2:3946956/1‑93 (MQ=255)
                                                                       gCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACg                  <  1:3935577/93‑1 (MQ=255)
                                                                          tttGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGaa               >  2:9754375/1‑93 (MQ=255)
                                                                           ttGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAg              <  2:2391741/93‑1 (MQ=255)
                                                                            tGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGt             >  2:918295/1‑93 (MQ=255)
                                                                            tGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGt             >  1:7425513/1‑93 (MQ=255)
                                                                            tGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGt             >  1:3427365/1‑93 (MQ=255)
                                                                             gAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACACGGAGTTACCGTGAGTAGCGTCCTGGGTCCGGAAGtt            >  2:7529777/1‑93 (MQ=255)
                                                                               acacTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTcc          <  2:2733213/93‑1 (MQ=255)
                                                                               acacTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTcc          >  2:6892705/1‑93 (MQ=255)
                                                                               acacTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTcc          >  1:2924811/1‑93 (MQ=255)
                                                                               acacTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTcc          <  2:84191/93‑1 (MQ=255)
                                                                                cacTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCa         >  2:961001/1‑93 (MQ=255)
                                                                                cacTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCa         >  1:8951159/1‑93 (MQ=255)
                                                                                cacTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCCGGGTACGGAAGTTCCa         >  2:8741241/1‑93 (MQ=255)
                                                                                  cTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAgc       >  1:5145410/1‑93 (MQ=255)
                                                                                  cTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAgc       >  2:495502/1‑93 (MQ=255)
                                                                                  cTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAgc       <  1:9345082/93‑1 (MQ=255)
                                                                                  cTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAgc       >  2:6071794/1‑93 (MQ=255)
                                                                                   tttGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAgcg      >  2:2192233/1‑93 (MQ=255)
                                                                                    ttGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAgcgc     >  1:1642901/1‑93 (MQ=255)
                                                                                    ttGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAgcgc     >  2:181100/1‑93 (MQ=255)
                                                                                      gCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAGCGCtt   <  1:2636955/93‑1 (MQ=255)
                                                                                       cccAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAGCGCTTa  <  2:5286429/93‑1 (MQ=255)
                                                                                       cccAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGAGTACGGAAGTTCCAGCGCTTa  <  2:6514464/93‑1 (MQ=255)
                                                                                          |                                                                                         
GCGTCAACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCGGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAGCGCTTA  >  NC_000913/3450019‑3450198

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 236 total aligned reads displayed.
TCAGCGTCAACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCGGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAGCGCTTAACGG  >  NC_000913/3450016‑3450202
                                                                                             |                                                                                             
TCAGCGTCAACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCA                                                                                               <  SRR4302540.1086690/94‑1 (MQ=60)
TCAGCGTCAACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCA                                                                                               >  SRR4302540.1343998/1‑94 (MQ=60)
 CAGCGTCAACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAG                                                                                              >  SRR4302540.7535202/1‑94 (MQ=60)
 CAGCGTCAACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTGCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAG                                                                                              <  SRR4302540.2444501/94‑1 (MQ=60)
  AGCGTCAACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGA                                                                                             >  SRR4302540.1485162/1‑94 (MQ=60)
   GCGTCAACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAG                                                                                            <  SRR4302540.897609/94‑1 (MQ=60)
   GCGTCAACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAG                                                                                            <  SRR4302540.4256287/94‑1 (MQ=60)
   GCGTCAACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAG                                                                                            <  SRR4302540.4597147/94‑1 (MQ=60)
   GCGTCAACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAG                                                                                            <  SRR4302540.5392726/94‑1 (MQ=60)
    CGTCAACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGT                                                                                           <  SRR4302540.3805456/94‑1 (MQ=60)
     GTCAACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGGCCTGCCATTTTCTTGCCTTGGAACACTTTGCCCAGAGTC                                                                                          >  SRR4302540.9892987/1‑94 (MQ=60)
     GTCAACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTC                                                                                          >  SRR4302540.4608822/1‑94 (MQ=60)
     GTCAACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTC                                                                                          >  SRR4302540.1677454/1‑94 (MQ=60)
      TCAACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCT                                                                                         <  SRR4302540.7864181/94‑1 (MQ=60)
      TCAACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCT                                                                                         >  SRR4302540.10114343/1‑94 (MQ=60)
      TCAACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCT                                                                                         <  SRR4302540.9178290/94‑1 (MQ=60)
       CAACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTG                                                                                        >  SRR4302540.1575141/1‑94 (MQ=60)
       CAACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTG                                                                                        <  SRR4302540.259588/94‑1 (MQ=60)
       CAACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTG                                                                                        >  SRR4302540.6450128/1‑94 (MQ=60)
        AACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGG                                                                                       >  SRR4302540.457073/1‑94 (MQ=60)
        AACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGG                                                                                       >  SRR4302540.24722/1‑94 (MQ=60)
         ACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGT                                                                                      >  SRR4302540.3121852/1‑94 (MQ=60)
           GCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTC                                                                                    >  SRR4302540.1351801/1‑94 (MQ=60)
           GCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTC                                                                                    >  SRR4302540.7287977/1‑94 (MQ=60)
            CGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCT                                                                                   <  SRR4302540.5559475/94‑1 (MQ=60)
            CGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCT                                                                                   >  SRR4302540.1880883/1‑94 (MQ=60)
             GTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTG                                                                                  >  SRR4302540.2610077/1‑94 (MQ=60)
             GTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTG                                                                                  >  SRR4302540.3281781/1‑94 (MQ=60)
             GTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTG                                                                                  >  SRR4302540.6477142/1‑94 (MQ=60)
              TACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGA                                                                                 >  SRR4302540.10068472/1‑94 (MQ=60)
               ACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGAC                                                                                >  SRR4302540.4638388/1‑94 (MQ=60)
               ACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGAC                                                                                <  SRR4302540.9161746/94‑1 (MQ=60)
                CTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACC                                                                               <  SRR4302540.1551884/94‑1 (MQ=60)
                CTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACC                                                                               <  SRR4302540.8148946/94‑1 (MQ=60)
                CTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACC                                                                               >  SRR4302540.274784/1‑94 (MQ=60)
                CTAAGTCAAGGCTCTGACCGGTTACATGTGCTTTACCCTTCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACC                                                                               <  SRR4302540.1383700/94‑1 (MQ=60)
                    GTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATA                                                                           <  SRR4302540.5999127/94‑1 (MQ=60)
                    GTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGGTCTGACCGATA                                                                           >  SRR4302540.884111/1‑94 (MQ=60)
                     TCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAG                                                                          <  SRR4302540.8157758/94‑1 (MQ=60)
                     TCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAG                                                                          <  SRR4302540.7661355/94‑1 (MQ=60)
                      CAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGA                                                                         <  SRR4302540.9501800/94‑1 (MQ=60)
                       AAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAA                                                                        >  SRR4302540.7561022/1‑94 (MQ=60)
                       AAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAA                                                                        >  SRR4302540.5409536/1‑94 (MQ=60)
                       AAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAA                                                                        <  SRR4302540.5549405/94‑1 (MQ=60)
                       AAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAA                                                                        >  SRR4302540.2267206/1‑94 (MQ=60)
                        AGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAAC                                                                       <  SRR4302540.8906209/94‑1 (MQ=60)
                        AGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAAC                                                                       >  SRR4302540.8270818/1‑94 (MQ=60)
                        AGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAAC                                                                       <  SRR4302540.5603802/94‑1 (MQ=60)
                        AGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAAC                                                                       <  SRR4302540.5370741/94‑1 (MQ=60)
                        AGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAAC                                                                       <  SRR4302540.7421757/94‑1 (MQ=60)
                         GGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACC                                                                      <  SRR4302540.6857572/94‑1 (MQ=60)
                         GGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACC                                                                      >  SRR4302540.7405387/1‑94 (MQ=60)
                           CTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCG                                                                    >  SRR4302540.7190108/1‑94 (MQ=60)
                            TCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGG                                                                   >  SRR4302540.651870/1‑94 (MQ=60)
                             CTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGA                                                                  >  SRR4302540.5717060/1‑94 (MQ=60)
                             CTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGA                                                                  >  SRR4302540.2623758/1‑94 (MQ=60)
                              TGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGCA                                                                 >  SRR4302540.9421258/1‑94 (MQ=60)
                               GAACGGTTACCCGTTCGTTCCCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAAC                                                                <  SRR4302540.9575081/94‑1 (MQ=60)
                               GAACGGTTACACGTTCGTTCCCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAAC                                                                <  SRR4302540.602700/94‑1 (MQ=60)
                               GAACGGTTACACGTTCGTTACCCATCTGACTTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAAC                                                                <  SRR4302540.8160983/94‑1 (MQ=60)
                               GAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAAC                                                                <  SRR4302540.2782076/94‑1 (MQ=60)
                               GAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAAC                                                                <  SRR4302540.5965270/94‑1 (MQ=60)
                                AACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACG                                                               <  SRR4302540.6647542/94‑1 (MQ=60)
                                  CGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGAGCGATAGAACCCGGAACGCG                                                             >  SRR4302540.8207649/1‑94 (MQ=60)
                                  CGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCG                                                             <  SRR4302540.8600175/94‑1 (MQ=60)
                                  CGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCG                                                             >  SRR4302540.9246451/1‑94 (MQ=60)
                                    GTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGT                                                           >  SRR4302540.4633043/1‑94 (MQ=60)
                                    GTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGT                                                           <  SRR4302540.7930252/94‑1 (MQ=60)
                                    GTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGT                                                           >  SRR4302540.234763/1‑94 (MQ=60)
                                     TTCCACGTTCTTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTG                                                          <  SRR4302540.7843094/94‑1 (MQ=60)
                                      TACACGTTCGTTACCCATCTGACCTGCCATTTTCTTTCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGA                                                         >  SRR4302540.1843885/1‑94 (MQ=60)
                                      TACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGA                                                         <  SRR4302540.590599/94‑1 (MQ=60)
                                      TACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGA                                                         >  SRR4302540.3948973/1‑94 (MQ=60)
                                        CACGTTCGTTATCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTAGCCCAGAGTCTGGTTCCGACCGATAGAACCCGGCACGCGGTGAGC                                                       >  SRR4302540.9063216/1‑94 (MQ=60)
                                          CGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACA                                                     <  SRR4302540.6415432/94‑1 (MQ=60)
                                           GTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAA                                                    <  SRR4302540.5955139/94‑1 (MQ=60)
                                           GTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAA                                                    >  SRR4302540.5824219/1‑94 (MQ=60)
                                           GTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAA                                                    >  SRR4302540.8808207/1‑94 (MQ=60)
                                            TTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAG                                                   <  SRR4302540.1310916/94‑1 (MQ=60)
                                             TCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGG                                                  <  SRR4302540.5527893/94‑1 (MQ=60)
                                             TCGTTACACATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGG                                                  <  SRR4302540.9663248/94‑1 (MQ=60)
                                              CGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGA                                                 <  SRR4302540.1750543/94‑1 (MQ=60)
                                              CGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGA                                                 <  SRR4302540.7134978/94‑1 (MQ=60)
                                               GTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAG                                                <  SRR4302540.6171898/94‑1 (MQ=60)
                                               GTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAG                                                >  SRR4302540.8762744/1‑94 (MQ=60)
                                                 TACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTT                                              <  SRR4302540.3835960/94‑1 (MQ=60)
                                                 TACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTT                                              >  SRR4302540.1443168/1‑94 (MQ=60)
                                                 TACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTT                                              <  SRR4302540.9625430/94‑1 (MQ=60)
                                                  ACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTA                                             >  SRR4302540.2770901/1‑94 (MQ=60)
                                                  ACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTA                                             >  SRR4302540.488348/1‑94 (MQ=60)
                                                  ACCCATCTGACCTGCCATTTGCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTA                                             >  SRR4302540.9856921/1‑94 (MQ=60)
                                                   CCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACTCTGGGAGACAAGGAGTTAC                                            >  SRR4302540.10063035/1‑94 (MQ=60)
                                                   CCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTAC                                            >  SRR4302540.8299017/1‑94 (MQ=60)
                                                   CCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTAC                                            >  SRR4302540.8510824/1‑94 (MQ=60)
                                                    CCATCTGCCCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACC                                           <  SRR4302540.837527/94‑1 (MQ=60)
                                                    CCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACC                                           <  SRR4302540.811379/94‑1 (MQ=60)
                                                    CCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACC                                           >  SRR4302540.4028302/1‑94 (MQ=60)
                                                    CCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACC                                           <  SRR4302540.1325876/94‑1 (MQ=60)
                                                    CCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACC                                           >  SRR4302540.654935/1‑94 (MQ=60)
                                                     cactcggCCTGCCTTTTTCTTGCCTTTGAACACTTGGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCG                                          <  SRR4302540.2605597/87‑1 (MQ=60)
                                                     CATCTGACCTGGCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCG                                          <  SRR4302540.3581908/94‑1 (MQ=60)
                                                     CATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCG                                          >  SRR4302540.8053685/1‑94 (MQ=60)
                                                     CATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCG                                          <  SRR4302540.2667627/94‑1 (MQ=60)
                                                     CATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCG                                          <  SRR4302540.4543581/94‑1 (MQ=60)
                                                      ATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATCGAACCCGGAACGCGGTGCGACAAGGAGTTACCGT                                         >  SRR4302540.1240671/1‑94 (MQ=60)
                                                      ATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGT                                         <  SRR4302540.5013325/94‑1 (MQ=60)
                                                      ATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGT                                         >  SRR4302540.4968182/1‑94 (MQ=60)
                                                      ATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGT                                         >  SRR4302540.5586902/1‑94 (MQ=60)
                                                      ATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGG                                         >  SRR4302540.3349819/1‑94 (MQ=60)
                                                       TCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTG                                        >  SRR4302540.2613231/1‑94 (MQ=60)
                                                        CTGCCCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGA                                       <  SRR4302540.8704134/94‑1 (MQ=60)
                                                        CTGACCTTCCATTTTCGTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGATCCCGGAACGCGGTGAGACAAGGAGTTACCGTGA                                       <  SRR4302540.9594009/94‑1 (MQ=60)
                                                        CTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGA                                       <  SRR4302540.9594008/94‑1 (MQ=60)
                                                         TGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAG                                      >  SRR4302540.3934169/1‑94 (MQ=60)
                                                         TGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAG                                      <  SRR4302540.644581/94‑1 (MQ=60)
                                                         TGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAG                                      <  SRR4302540.3317347/94‑1 (MQ=60)
                                                         TGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAG                                      <  SRR4302540.5438786/94‑1 (MQ=60)
                                                          GACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGCGT                                     >  SRR4302540.5055980/1‑94 (MQ=60)
                                                          GACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGT                                     <  SRR4302540.8631324/94‑1 (MQ=60)
                                                          GACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGT                                     >  SRR4302540.4563123/1‑94 (MQ=60)
                                                          GACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGT                                     <  SRR4302540.5944325/94‑1 (MQ=60)
                                                            CCTGCCAGTTTCTTACCTGTGAACACTTTGCCCATAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAG                                   <  SRR4302540.6265740/94‑1 (MQ=60)
                                                             CTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGCGACAAGGTGTTACCGTGAGTcgg                                  >  SRR4302540.8852150/1‑91 (MQ=60)
                                                             CTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGC                                  >  SRR4302540.3228687/1‑94 (MQ=60)
                                                             CTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGC                                  >  SRR4302540.7445270/1‑94 (MQ=60)
                                                             CTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGC                                  >  SRR4302540.3803543/1‑94 (MQ=60)
                                                             CTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGC                                  <  SRR4302540.10096294/94‑1 (MQ=60)
                                                             CTGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGACTTCCCGTGAGgagg                                  >  SRR4302540.985980/1‑90 (MQ=60)
                                                              TGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCG                                 >  SRR4302540.8085525/1‑94 (MQ=60)
                                                              TGCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCG                                 <  SRR4302540.1435029/94‑1 (MQ=60)
                                                               GCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGT                                <  SRR4302540.5843958/94‑1 (MQ=60)
                                                               GCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGT                                <  SRR4302540.9522365/94‑1 (MQ=60)
                                                               GCCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGT                                <  SRR4302540.4158972/94‑1 (MQ=60)
                                                                CCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTC                               >  SRR4302540.3474922/1‑94 (MQ=60)
                                                                CCATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTC                               >  SRR4302540.5978766/1‑94 (MQ=60)
                                                                 CATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCC                              <  SRR4302540.3317814/94‑1 (MQ=60)
                                                                 CATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCC                              <  SRR4302540.9936410/94‑1 (MQ=60)
                                                                  ATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCT                             >  SRR4302540.8541755/1‑94 (MQ=60)
                                                                  ATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCT                             <  SRR4302540.122121/94‑1 (MQ=60)
                                                                  ATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCT                             >  SRR4302540.8290587/1‑94 (MQ=60)
                                                                  ATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCT                             >  SRR4302540.8932085/1‑94 (MQ=60)
                                                                  ATTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCT                             <  SRR4302540.3054972/94‑1 (MQ=60)
                                                                   TTTTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTG                            <  SRR4302540.2095944/94‑1 (MQ=60)
                                                                     TTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGG                          <  SRR4302540.5520450/94‑1 (MQ=60)
                                                                     TTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGG                          >  SRR4302540.5888520/1‑94 (MQ=60)
                                                                     TTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGG                          <  SRR4302540.1074855/94‑1 (MQ=60)
                                                                     TTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGG                          <  SRR4302540.690712/94‑1 (MQ=60)
                                                                     TTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGG                          >  SRR4302540.5081637/1‑94 (MQ=60)
                                                                     TTCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGGTACCGTGAGTAGCGTCCTGGG                          >  SRR4302540.6352898/1‑94 (MQ=60)
                                                                      TCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGT                         <  SRR4302540.6765434/94‑1 (MQ=60)
                                                                      TCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGT                         >  SRR4302540.2869801/1‑94 (MQ=60)
                                                                      TCTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGT                         >  SRR4302540.4957466/1‑94 (MQ=60)
                                                                       CTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTA                        >  SRR4302540.7548822/1‑94 (MQ=60)
                                                                       CTTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTA                        <  SRR4302540.6291185/94‑1 (MQ=60)
                                                                        TTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTAC                       <  SRR4302540.6602669/94‑1 (MQ=60)
                                                                        TTGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTAC                       <  SRR4302540.9489737/94‑1 (MQ=60)
                                                                         TGCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACG                      <  SRR4302540.5842150/94‑1 (MQ=60)
                                                                          GCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGG                     <  SRR4302540.3978114/94‑1 (MQ=60)
                                                                          GCCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGG                     >  SRR4302540.3212624/1‑94 (MQ=60)
                                                                           CCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGGGTTACCGTGAGTAGCGTCCTGGGTATGGA                    >  SRR4302540.8948215/1‑94 (MQ=60)
                                                                           CCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGA                    >  SRR4302540.2747710/1‑94 (MQ=60)
                                                                           CCTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGA                    >  SRR4302540.577546/1‑94 (MQ=60)
                                                                            CTTTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAA                   >  SRR4302540.9634435/1‑94 (MQ=60)
                                                                              TTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGT                 <  SRR4302540.9963842/94‑1 (MQ=60)
                                                                              TTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGT                 >  SRR4302540.4450432/1‑94 (MQ=60)
                                                                              TTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGT                 >  SRR4302540.8268498/1‑94 (MQ=60)
                                                                              TTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGT                 >  SRR4302540.7508229/1‑94 (MQ=60)
                                                                              TTGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGT                 >  SRR4302540.3464612/1‑94 (MQ=60)
                                                                               TGAACACTTTGCCCAGAGTCTGGTTCTGACGGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTT                >  SRR4302540.252324/1‑94 (MQ=60)
                                                                               TGAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTC                >  SRR4302540.1652362/1‑94 (MQ=60)
                                                                                GAACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTC               <  SRR4302540.4801378/94‑1 (MQ=60)
                                                                                 AACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCC              >  SRR4302540.6314663/1‑94 (MQ=60)
                                                                                  ACACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCA             >  SRR4302540.9272391/1‑94 (MQ=60)
                                                                                    ACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAGC           <  SRR4302540.3014323/94‑1 (MQ=60)
                                                                                    ACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAGC           <  SRR4302540.5653724/94‑1 (MQ=60)
                                                                                    ACTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAGC           >  SRR4302540.5201147/1‑94 (MQ=60)
                                                                                     CTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAGCG          >  SRR4302540.278546/1‑94 (MQ=60)
                                                                                     CTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAGCG          <  SRR4302540.5588544/94‑1 (MQ=60)
                                                                                     CTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAGCG          >  SRR4302540.5063195/1‑94 (MQ=60)
                                                                                     CTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAGCG          >  SRR4302540.5063194/1‑94 (MQ=60)
                                                                                     CTTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAGCG          <  SRR4302540.9456414/94‑1 (MQ=60)
                                                                                      TTTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAGCGC         >  SRR4302540.1660852/1‑94 (MQ=60)
                                                                                       TTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAGCGCT        >  SRR4302540.903653/1‑94 (MQ=60)
                                                                                       TTGCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAGCGCT        <  SRR4302540.776890/94‑1 (MQ=60)
                                                                                        TGGCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAGCGCTT       <  SRR4302540.1280691/94‑1 (MQ=60)
                                                                                         GCCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAGCGCTTA      <  SRR4302540.2665511/94‑1 (MQ=60)
                                                                                          CCCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAGCGCTTAA     >  SRR4302540.1640321/1‑94 (MQ=60)
                                                                                           CCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAGCGCTTAAC    <  SRR4302540.391141/94‑1 (MQ=60)
                                                                                           CCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAGCGCTTAAC    <  SRR4302540.8852807/94‑1 (MQ=60)
                                                                                           CCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAGCGCTTAAC    >  SRR4302540.8655061/1‑94 (MQ=60)
                                                                                           CCAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGGCCTGGGGACGGAAGTTCCAGCGATTAAC    >  SRR4302540.7621769/1‑94 (MQ=60)
                                                                                           CCAGAGTCTGGTTATGACCGATAAAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGAAGCGTCCTGGGTACGGAAGTTCCAGCGCTTAAC    <  SRR4302540.9077488/94‑1 (MQ=60)
                                                                                            CAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAGCGCTTAACG   <  SRR4302540.5048697/94‑1 (MQ=60)
                                                                                            CAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAGCGCTTAACG   >  SRR4302540.4217462/1‑94 (MQ=60)
                                                                                            CAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAGCGCTTAACG   <  SRR4302540.3025885/94‑1 (MQ=60)
                                                                                            CAGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAGCGCTTAACG   <  SRR4302540.6647949/94‑1 (MQ=60)
                                                                                             AGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAGGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAGCGCTTAACGG  >  SRR4302540.6051302/1‑94 (MQ=60)
                                                                                             AGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAGCGCTTAACGG  >  SRR4302540.6051303/1‑94 (MQ=60)
                                                                                             AGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAGCGCTTAACGG  >  SRR4302540.300876/1‑94 (MQ=60)
                                                                                             AGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAGCGCTTAACGG  >  SRR4302540.6431052/1‑94 (MQ=60)
                                                                                             |                                                                                             
TCAGCGTCAACGCGTACTACGTCAAGGCTCTGAACGGTTACACGTTCGTTACCCATCTGACCTGCCATTTTCTTGCCTTTGAACACTTTGCCCGGAGTCTGGTTCTGACCGATAGAACCCGGAACGCGGTGAGACAAGGAGTTACCGTGAGTAGCGTCCTGGGTACGGAAGTTCCAGCGCTTAACGG  >  NC_000913/3450016‑3450202

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑