Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,450,844 T→C T22A (ACC→GCC)  rpsJ ← 30S ribosomal subunit protein S10

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,450,8440TC90.8% 1192.2 / 86.4 457T22A (ACC→GCC) rpsJ30S ribosomal subunit protein S10
Reads supporting (aligned to +/- strand):  ref base T (12/30);  new base C (211/203);  total (223/234)
Fisher's exact test for biased strand distribution p-value = 5.87e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.56e-01

Only 100 of 481 total aligned reads displayed.

CAGAACAGTGAAGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGTTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAATTATTTTATAAAC  >  NC_000913/3450752‑3450936
                                                                                            |                                                                                            
cAGAACAGTGAAGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGt                                                                                              <  1:6963657/93‑1 (MQ=255)
  gAACAGTGAAGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTg                                                                                            >  2:6697247/1‑93 (MQ=255)
  gAACAGTGAAGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTg                                                                                            >  2:5645714/1‑93 (MQ=255)
      aGTGAAGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTg                                                                                        >  2:9825075/1‑93 (MQ=255)
       gTGAAGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGTTGCTTga                                                                                       <  1:6450272/93‑1 (MQ=255)
       gTGAAGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTga                                                                                       <  1:8085682/93‑1 (MQ=255)
       gTGAAGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTga                                                                                       <  1:8202019/93‑1 (MQ=255)
        tGAAGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTgat                                                                                      >  2:312490/1‑93 (MQ=255)
        tGAAGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGGCTCGACGATTTCCGCGGCtgattgat                                                                                      >  1:421377/1‑93 (MQ=255)
         gAAGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTgatc                                                                                     <  2:5928058/93‑1 (MQ=255)
         gAAGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTgatc                                                                                     <  2:1675259/93‑1 (MQ=255)
           aGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGGTGCTTgatcga                                                                                   <  2:7485396/93‑1 (MQ=255)
           aGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTgatcga                                                                                   <  1:2521455/93‑1 (MQ=255)
           aGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTgatcga                                                                                   <  1:2412191/93‑1 (MQ=255)
           aGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTgatcga                                                                                   >  2:4519127/1‑93 (MQ=255)
            gcgcTCTGTGCGTGTCGGCATCGGGATCGGACCACGGACCTGCGCACGAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTgatcgat                                                                                  <  2:920804/93‑1 (MQ=255)
             cgcTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTgatcgatc                                                                                 <  2:7045436/93‑1 (MQ=255)
             cgcTCTTTGCGTGTCGGCAGCGGCATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTgatcgatc                                                                                 <  2:7224077/93‑1 (MQ=255)
              gcTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGTTGCTTGATCGATCa                                                                                <  2:4300019/93‑1 (MQ=255)
              gcTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCa                                                                                <  1:2090496/93‑1 (MQ=255)
                tctTTGCGTGTAGGCAGCGGGATCGAACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGa                                                                              <  2:713593/93‑1 (MQ=255)
                 ctTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGAc                                                                             >  2:540185/1‑93 (MQ=255)
                 ctTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGAGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGAACGATCAGAc                                                                             >  2:9419833/1‑93 (MQ=255)
                  tttGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACg                                                                            <  1:1524772/93‑1 (MQ=255)
                   ttGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACga                                                                           <  2:3581266/93‑1 (MQ=255)
                    tGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACgat                                                                          <  1:3185386/93‑1 (MQ=255)
                    tGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACgat                                                                          <  2:2998426/93‑1 (MQ=255)
                      cGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACgatga                                                                        <  2:1892347/93‑1 (MQ=255)
                       gtgtCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACgataat                                                                       >  1:7331502/1‑93 (MQ=255)
                         gtCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCa                                                                     >  2:9738816/1‑93 (MQ=255)
                         gtCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCGGGTTAATGGATAAGACGATGATCa                                                                     >  2:9539387/1‑93 (MQ=255)
                           cGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCaaa                                                                   <  2:8423726/93‑1 (MQ=255)
                           cGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCaaa                                                                   <  2:5286371/93‑1 (MQ=255)
                            ggCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAAc                                                                  <  1:6014457/93‑1 (MQ=255)
                            ggCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAAc                                                                  <  2:1536298/93‑1 (MQ=255)
                               aGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGTTGCTTGATCGATCAGACGATGATCAAACGCt                                                               <  2:825100/93‑1 (MQ=255)
                                gctggATCGGACCACGGACCTGCGCACCAGTGCGCGTGGCAGTCTCGACGATTTCCGAGGCTGCTTGATCGATCAGACGATGATCAAACGCtt                                                              <  1:10013723/90‑1 (MQ=255)
                                 cGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCttt                                                             >  1:8498199/1‑93 (MQ=255)
                                  gggATCGGACCGCGGACCTGCGCACCAGTGCGCTGGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTc                                                            <  2:2313650/93‑1 (MQ=255)
                                   ggATCGGACCACGGGCCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCa                                                           <  1:3482641/93‑1 (MQ=255)
                                   ggATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCa                                                           <  2:849295/93‑1 (MQ=255)
                                   ggATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCa                                                           >  2:6101097/1‑93 (MQ=255)
                                    gATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAg                                                          >  1:2788076/1‑93 (MQ=255)
                                    gATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTCCTTGATCGATCAGACGATGATCAAACGCTTTCAg                                                          <  1:3324116/93‑1 (MQ=255)
                                     aTCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAgg                                                         <  2:4838976/93‑1 (MQ=255)
                                     aTCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAgg                                                         <  1:562566/93‑1 (MQ=255)
                                     aTCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAgg                                                         <  1:3605011/93‑1 (MQ=255)
                                      tCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGc                                                        >  2:5822484/1‑93 (MQ=255)
                                      tCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGc                                                        <  1:9972838/93‑1 (MQ=255)
                                      tCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGc                                                        <  2:3471425/93‑1 (MQ=255)
                                         gACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGa                                                     <  2:9134466/93‑1 (MQ=255)
                                          aCCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGTTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGAt                                                    >  2:7389271/1‑93 (MQ=255)
                                           ccACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATa                                                   <  1:7574533/93‑1 (MQ=255)
                                           ccACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATa                                                   <  2:2789332/93‑1 (MQ=255)
                                           ccACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATa                                                   <  1:1964233/93‑1 (MQ=255)
                                             aCGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGTTGCTTGATCGATCAGACGATGATCTAACGCTTTCAGGCGGATACg                                                 >  2:1992346/1‑93 (MQ=255)
                                               ggACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGa                                               <  1:9289683/93‑1 (MQ=255)
                                                 gccTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGAtt                                             <  2:2720702/92‑1 (MQ=255)
                                                  ccTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGTTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTc                                            <  1:1764140/93‑1 (MQ=255)
                                                    tGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCtt                                          <  2:8694987/93‑1 (MQ=255)
                                                    tGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCtt                                          >  2:1326161/1‑93 (MQ=255)
                                                    tGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCtt                                          <  2:5124665/93‑1 (MQ=255)
                                                       gcACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTgg                                       <  1:5255139/93‑1 (MQ=255)
                                                       gcACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTgg                                       <  1:4297487/93‑1 (MQ=255)
                                                       gcACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTgg                                       >  1:5777584/1‑93 (MQ=255)
                                                         aCCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGtt                                     >  1:1190260/1‑93 (MQ=255)
                                                         aCCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGtt                                     >  1:292013/1‑93 (MQ=255)
                                                         aCCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGtt                                     >  1:7810251/1‑93 (MQ=255)
                                                          ccAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGTTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTc                                    <  1:50659/93‑1 (MQ=255)
                                                           cAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCt                                   >  1:861671/1‑93 (MQ=255)
                                                             gTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGc                                 >  1:5397842/1‑93 (MQ=255)
                                                              tGCGCTTGGCAGTCTCGACGATTTCCGCGGTTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCa                                <  2:8871951/93‑1 (MQ=255)
                                                              tGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCCGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTTGGTCTGCa                                >  1:5477449/1‑93 (MQ=255)
                                                              tGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCa                                >  1:4939494/1‑93 (MQ=255)
                                                              tGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCa                                >  1:4563838/1‑93 (MQ=255)
                                                              tGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCa                                >  1:9486626/1‑93 (MQ=255)
                                                              tGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCa                                >  1:9091813/1‑93 (MQ=255)
                                                               gcgcTTGGCAGTCTCGGCGATTTCCGAGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGAGGATACGGATTCTTTGGATCTGCaa                               <  2:8992870/93‑2 (MQ=255)
                                                               gcgcTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCAt                               >  2:7905991/1‑93 (MQ=255)
                                                                  cTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATgag                            <  2:2555558/93‑1 (MQ=255)
                                                                  cTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATgag                            <  1:1326226/93‑1 (MQ=255)
                                                                   ttGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATgaga                           <  1:3861877/93‑1 (MQ=255)
                                                                   ttGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATgaga                           <  1:2965327/93‑1 (MQ=255)
                                                                   ttGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATgaga                           >  2:2351751/1‑93 (MQ=255)
                                                                     ggCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGAcc                         >  2:3946750/1‑93 (MQ=255)
                                                                      gCAGTCTCGACGATTTCCGCGGTTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCa                        <  1:613643/93‑1 (MQ=255)
                                                                      gCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCa                        >  2:816990/1‑93 (MQ=255)
                                                                      gCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCa                        <  1:9003921/93‑1 (MQ=255)
                                                                      gCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCa                        <  2:110755/93‑1 (MQ=255)
                                                                        aGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCaga                      <  2:4066624/93‑1 (MQ=255)
                                                                          tctcGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGc                    >  1:6309042/1‑93 (MQ=255)
                                                                          tctcGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGc                    <  2:6311254/93‑1 (MQ=255)
                                                                            tcGACGATTTCCGCGGTTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTc                  >  1:7989950/1‑93 (MQ=255)
                                                                            tcGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTc                  <  1:9749707/93‑1 (MQ=255)
                                                                            tcGACGATTTCCGCCGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGAGTCTTTGGTTCTGCATGAGAGCAGAGCTc                  >  2:3844319/1‑93 (MQ=255)
                                                                             cgacgaTTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTcc                 <  1:4815905/93‑1 (MQ=255)
                                                                               acgaTTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCaa               >  1:7481436/1‑93 (MQ=255)
                                                                                 gaTTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAatt             <  1:5951426/93‑1 (MQ=255)
                                                                                  aTTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAatta            >  1:6750964/1‑93 (MQ=255)
                                                                                  aTTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAatta            >  2:209332/1‑93 (MQ=255)
                                                                                            |                                                                                            
CAGAACAGTGAAGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGTTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAATTATTTTATAAAC  >  NC_000913/3450752‑3450936

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 249 total aligned reads displayed.
CAGAACAGTGAAGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGTTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAATTATTTTATAAACG  >  NC_000913/3450752‑3450937
                                                                                            |                                                                                             
CAGAACAGTGAAGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGTT                                                                                              <  SRR4302540.7041098/94‑1 (MQ=60)
 AGAACAGTGAAGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTG                                                                                             >  SRR4302540.2134485/1‑94 (MQ=60)
 AGAACAGTGAAGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTG                                                                                             <  SRR4302540.2388859/94‑1 (MQ=60)
 AGAACAGTGAAGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTG                                                                                             >  SRR4302540.4278522/1‑94 (MQ=60)
  GAACAGTGAAGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGC                                                                                            >  SRR4302540.8869614/1‑94 (MQ=60)
   AACAGTGAAGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCT                                                                                           <  SRR4302540.4373837/94‑1 (MQ=60)
   AACAGTGAAGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCACAGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCT                                                                                           >  SRR4302540.3772814/1‑94 (MQ=60)
    ACAGTGAAGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTT                                                                                          <  SRR4302540.10026213/94‑1 (MQ=60)
      AGTGAAGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGA                                                                                        >  SRR4302540.109665/1‑94 (MQ=60)
       GTGAAGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGTTGCTTGAT                                                                                       <  SRR4302540.6522067/94‑1 (MQ=60)
       GTGAAGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGAT                                                                                       <  SRR4302540.8297332/94‑1 (MQ=60)
       GTGAAGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGAT                                                                                       <  SRR4302540.8297331/94‑1 (MQ=60)
       GTGAAGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGAT                                                                                       <  SRR4302540.8179528/94‑1 (MQ=60)
       GTGAAGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGAT                                                                                       >  SRR4302540.7510751/1‑94 (MQ=60)
       GTGAAGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGAT                                                                                       >  SRR4302540.425814/1‑94 (MQ=60)
        TGAAGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATC                                                                                      >  SRR4302540.492508/1‑94 (MQ=60)
         GAAGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCG                                                                                     <  SRR4302540.545492/94‑1 (MQ=60)
           AGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGAT                                                                                   <  SRR4302540.2438193/94‑1 (MQ=60)
           AGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGAT                                                                                   <  SRR4302540.2548681/94‑1 (MQ=60)
           AGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGAT                                                                                   <  SRR4302540.9838367/94‑1 (MQ=60)
            GCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGGCTCGACGATTTCCGCGGCTGCTTGATCGATC                                                                                  <  SRR4302540.5621982/94‑1 (MQ=60)
             CGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGTTGCTTGATCGATCA                                                                                 <  SRR4302540.9515151/94‑1 (MQ=60)
             CGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCA                                                                                 <  SRR4302540.9403816/94‑1 (MQ=60)
              GCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAG                                                                                >  SRR4302540.9321687/1‑94 (MQ=60)
              GCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAG                                                                                <  SRR4302540.2112949/94‑1 (MQ=60)
              GCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAG                                                                                <  SRR4302540.3721527/94‑1 (MQ=60)
               CTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGA                                                                               >  SRR4302540.5085637/1‑94 (MQ=60)
                TCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGAC                                                                              >  SRR4302540.2825330/1‑94 (MQ=60)
                 CTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACG                                                                             <  SRR4302540.6085976/94‑1 (MQ=60)
                  TTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGA                                                                            <  SRR4302540.1541655/94‑1 (MQ=60)
                    TGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATG                                                                          <  SRR4302540.8410876/94‑1 (MQ=60)
                    TGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATG                                                                          <  SRR4302540.2478646/94‑1 (MQ=60)
                    TGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATG                                                                          <  SRR4302540.3219996/94‑1 (MQ=60)
                     GCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGA                                                                         >  SRR4302540.7161501/1‑94 (MQ=60)
                      CGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGAT                                                                        <  SRR4302540.7080893/94‑1 (MQ=60)
                      CGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGAT                                                                        <  SRR4302540.3895946/94‑1 (MQ=60)
                      CGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGAT                                                                        <  SRR4302540.3041998/94‑1 (MQ=60)
                      CGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATAAT                                                                        >  SRR4302540.7413348/1‑94 (MQ=60)
                           CGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATGGATCAGACGATGATCAAAC                                                                   >  SRR4302540.4259803/1‑94 (MQ=60)
                           CGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAAC                                                                   >  SRR4302540.86338/1‑94 (MQ=60)
                           CGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAAC                                                                   <  SRR4302540.361054/94‑1 (MQ=60)
                           CGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAAC                                                                   <  SRR4302540.3008352/94‑1 (MQ=60)
                           CGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAAC                                                                   >  SRR4302540.4259804/1‑94 (MQ=60)
                           CGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAAC                                                                   <  SRR4302540.2681645/94‑1 (MQ=60)
                           CGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAAC                                                                   <  SRR4302540.5460786/94‑1 (MQ=60)
                            GGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACG                                                                  <  SRR4302540.7946597/94‑1 (MQ=60)
                            GGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACG                                                                  <  SRR4302540.9942748/94‑1 (MQ=60)
                            GGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACG                                                                  >  SRR4302540.58812/1‑94 (MQ=60)
                            GGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACG                                                                  <  SRR4302540.6081156/94‑1 (MQ=60)
                            GGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACG                                                                  >  SRR4302540.10133230/1‑94 (MQ=60)
                             GCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGCTCAGACGATGATCAAACGC                                                                 >  SRR4302540.496594/1‑94 (MQ=60)
                             GCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGC                                                                 <  SRR4302540.2844019/94‑1 (MQ=60)
                               AGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTT                                                               >  SRR4302540.6410805/1‑94 (MQ=60)
                               AGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTT                                                               >  SRR4302540.8609672/1‑94 (MQ=60)
                               AGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTT                                                               >  SRR4302540.2953461/1‑94 (MQ=60)
                               AGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTT                                                               >  SRR4302540.9677353/1‑94 (MQ=60)
                               AGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAAAGCTT                                                               >  SRR4302540.8228614/1‑94 (MQ=60)
                                GCTGGATCGGACCACGGACCTGCGCACCAGTGCGCGTGGCAGTCTCGACGATTTCCGAGGCTGCTTGATCGATCAGACGATGATCAAACGCTTT                                                              <  SRR4302540.10130305/94‑1 (MQ=60)
                                GCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTT                                                              <  SRR4302540.2955132/94‑1 (MQ=60)
                                GCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTT                                                              >  SRR4302540.8596944/1‑94 (MQ=60)
                                 GGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTC                                                             <  SRR4302540.7995904/94‑1 (MQ=60)
                                 CGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTC                                                             >  SRR4302540.8491681/1‑94 (MQ=60)
                                 CGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTC                                                             >  SRR4302540.3142059/1‑94 (MQ=60)
                                   GGATCGGACCACGGGCCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAG                                                           <  SRR4302540.3520561/94‑1 (MQ=60)
                                   GGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGTTGCTTGATCGATCAGACGATGATCAAACGCTTTCAG                                                           <  SRR4302540.6068427/94‑1 (MQ=60)
                                   GGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAG                                                           <  SRR4302540.3520560/94‑1 (MQ=60)
                                   GGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAG                                                           <  SRR4302540.2244458/94‑1 (MQ=60)
                                    GATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGG                                                          <  SRR4302540.6303388/94‑1 (MQ=60)
                                    GATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGG                                                          <  SRR4302540.7656576/94‑1 (MQ=60)
                                    GATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTCCTTGATCGATCAGACGATGATCAAACGCTTTCAGG                                                          <  SRR4302540.3360581/94‑1 (MQ=60)
                                     ATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGC                                                         <  SRR4302540.568685/94‑1 (MQ=60)
                                     ATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGC                                                         <  SRR4302540.2782628/94‑1 (MQ=60)
                                      TCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCG                                                        >  SRR4302540.5266156/1‑94 (MQ=60)
                                      TCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCG                                                        <  SRR4302540.10089157/94‑1 (MQ=60)
                                        GGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTTATCGATCAGACGATGATCAAACGCTTTCAGGCGGA                                                      >  SRR4302540.283770/1‑94 (MQ=60)
                                          ACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATA                                                    >  SRR4302540.1301135/1‑94 (MQ=60)
                                           CCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATAC                                                   <  SRR4302540.7659516/94‑1 (MQ=60)
                                           CCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATAC                                                   <  SRR4302540.1985568/94‑1 (MQ=60)
                                           CCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATAC                                                   >  SRR4302540.8965268/1‑94 (MQ=60)
                                           CCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATAC                                                   <  SRR4302540.9258614/94‑1 (MQ=60)
                                            CACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACG                                                  <  SRR4302540.1416012/94‑1 (MQ=60)
                                               GGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGTTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGAT                                               >  SRR4302540.7032178/1‑94 (MQ=60)
                                               GGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGAT                                               <  SRR4302540.9400703/94‑1 (MQ=60)
                                               GGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGAT                                               <  SRR4302540.2718905/94‑1 (MQ=60)
                                                GACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATT                                              >  SRR4302540.4580972/1‑94 (MQ=60)
                                                GACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATT                                              <  SRR4302540.5492091/94‑1 (MQ=60)
                                                  CCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGTTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCT                                            <  SRR4302540.1783275/94‑1 (MQ=60)
                                                   CTGCTCACCAGTGCGCTTCGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTT                                           <  SRR4302540.7549023/94‑1 (MQ=60)
                                                   CTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTT                                           >  SRR4302540.67673/1‑94 (MQ=60)
                                                   CTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTT                                           >  SRR4302540.5930498/1‑94 (MQ=60)
                                                   CTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTT                                           >  SRR4302540.4912959/1‑94 (MQ=60)
                                                    TGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTT                                          <  SRR4302540.1336896/94‑1 (MQ=60)
                                                     GCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTG                                         <  SRR4302540.1730200/94‑1 (MQ=60)
                                                      CGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGG                                        >  SRR4302540.5841406/1‑94 (MQ=60)
                                                      CGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGG                                        >  SRR4302540.5585816/1‑94 (MQ=60)
                                                       GCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCCGGCGGATACGGATTCTTTGGT                                       >  SRR4302540.6573183/1‑94 (MQ=60)
                                                       GCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGT                                       >  SRR4302540.6573184/1‑94 (MQ=60)
                                                       GCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGT                                       >  SRR4302540.7894376/1‑94 (MQ=60)
                                                       GCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGT                                       <  SRR4302540.5312454/94‑1 (MQ=60)
                                                       GCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGACCAAACGCTTTCAGGCGGATACGGATTCTTTGGT                                       <  SRR4302540.6011210/94‑1 (MQ=60)
                                                        CACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGTTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTT                                      >  SRR4302540.3251906/1‑94 (MQ=60)
                                                        CACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTT                                      >  SRR4302540.1202531/1‑94 (MQ=60)
                                                        CACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTT                                      >  SRR4302540.7901518/1‑94 (MQ=60)
                                                        CACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTT                                      >  SRR4302540.4756953/1‑94 (MQ=60)
                                                        CACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTT                                      >  SRR4302540.1977189/1‑94 (MQ=60)
                                                        CACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTT                                      >  SRR4302540.7901517/1‑94 (MQ=60)
                                                        CACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTT                                      >  SRR4302540.9604099/1‑94 (MQ=60)
                                                        CACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTT                                      >  SRR4302540.294898/1‑94 (MQ=60)
                                                        CACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTT                                      >  SRR4302540.7146128/1‑94 (MQ=60)
                                                         ACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTC                                     <  SRR4302540.10088594/94‑1 (MQ=60)
                                                         ACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTC                                     <  SRR4302540.4130082/94‑1 (MQ=60)
                                                          CCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGTTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCT                                    <  SRR4302540.51167/94‑1 (MQ=60)
                                                          CCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCT                                    >  SRR4302540.870818/1‑94 (MQ=60)
                                                          CCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCT                                    <  SRR4302540.8947035/94‑1 (MQ=60)
                                                          CCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCT                                    <  SRR4302540.6400723/94‑1 (MQ=60)
                                                          CCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCT                                    >  SRR4302540.1790347/1‑94 (MQ=60)
                                                            AGTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGC                                  >  SRR4302540.5457191/1‑94 (MQ=60)
                                                             GTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCCGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTTGGTCTGCA                                 >  SRR4302540.5537742/1‑94 (MQ=60)
                                                             GTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCT                                 >  SRR4302540.953763/1‑94 (MQ=60)
                                                             GTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCA                                 >  SRR4302540.5537744/1‑94 (MQ=60)
                                                             GTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCA                                 >  SRR4302540.9201043/1‑94 (MQ=60)
                                                             GTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCA                                 >  SRR4302540.9599102/1‑94 (MQ=60)
                                                             GTGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCA                                 >  SRR4302540.4579031/1‑94 (MQ=60)
                                                              TGCGCTTGGCAGTCTCGACGATTTCCGCGGTTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCAT                                <  SRR4302540.6070961/94‑1 (MQ=60)
                                                              TGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCAT                                >  SRR4302540.9150340/1‑94 (MQ=60)
                                                              TGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCAT                                <  SRR4302540.6852229/94‑1 (MQ=60)
                                                              TGCGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCAT                                <  SRR4302540.8165358/94‑1 (MQ=60)
                                                                CGCTTGGCAGTCTCGACGATTTCCGCTGCTCCTTGATCGATCAGACGATGAGCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGA                              <  SRR4302540.5045062/94‑1 (MQ=60)
                                                                CGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGA                              >  SRR4302540.3237860/1‑94 (MQ=60)
                                                                CGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGA                              <  SRR4302540.1665267/94‑1 (MQ=60)
                                                                CGCTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGA                              <  SRR4302540.5045061/94‑1 (MQ=60)
                                                                  CTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGA                            <  SRR4302540.1340063/94‑1 (MQ=60)
                                                                  CTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGA                            <  SRR4302540.498334/94‑1 (MQ=60)
                                                                  CTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGA                            <  SRR4302540.1340062/94‑1 (MQ=60)
                                                                  CTTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTCGTTCTGCATGAGC                            >  SRR4302540.1400438/1‑94 (MQ=60)
                                                                   TTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGAC                           <  SRR4302540.2998050/94‑1 (MQ=60)
                                                                   TTGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGAC                           <  SRR4302540.3952478/94‑1 (MQ=60)
                                                                    TGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACC                          <  SRR4302540.5745295/94‑1 (MQ=60)
                                                                    TGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACC                          >  SRR4302540.5251404/1‑94 (MQ=60)
                                                                    TGGCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACAATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACC                          >  SRR4302540.1690992/1‑94 (MQ=60)
                                                                    TGGCAGTATCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACC                          <  SRR4302540.5745296/94‑1 (MQ=60)
                                                                      GCAGTCTCGACGATTTCCGCGGTTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAG                        <  SRR4302540.620192/94‑1 (MQ=60)
                                                                      GCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCGTGAGACCAG                        <  SRR4302540.9111942/94‑1 (MQ=60)
                                                                      GCAGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAG                        <  SRR4302540.9111941/94‑1 (MQ=60)
                                                                        AGTCTCGACTATTGCCGCGGTTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAG                      <  SRR4302540.2356636/94‑1 (MQ=60)
                                                                        AGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCACACGCTTTCCGGCGGCTCCGGGTTCTTTGGTTCTGTATGAGcagagag                      >  SRR4302540.3625156/1‑87 (MQ=60)
                                                                        AGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAG                      >  SRR4302540.5375866/1‑94 (MQ=60)
                                                                        AGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAG                      >  SRR4302540.3625157/1‑94 (MQ=60)
                                                                        AGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAG                      <  SRR4302540.202219/94‑1 (MQ=60)
                                                                        AGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAG                      >  SRR4302540.5448897/1‑94 (MQ=60)
                                                                        AGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAG                      >  SRR4302540.7502979/1‑94 (MQ=60)
                                                                        AGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAG                      >  SRR4302540.2500888/1‑94 (MQ=60)
                                                                        AGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAG                      >  SRR4302540.7159566/1‑94 (MQ=60)
                                                                        AGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAG                      <  SRR4302540.6356400/94‑1 (MQ=60)
                                                                        AGTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAG                      >  SRR4302540.9129716/1‑94 (MQ=60)
                                                                        AGGCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGGTACGGATTCTTTGGTTCTGCATGAGACCAGAG                      >  SRR4302540.3625158/1‑94 (MQ=60)
                                                                         GTCTCGACGATTTCCGCGGTTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGC                     <  SRR4302540.1378260/94‑1 (MQ=60)
                                                                         GTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGC                     >  SRR4302540.3267453/1‑94 (MQ=60)
                                                                         GTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGC                     >  SRR4302540.2060412/1‑94 (MQ=60)
                                                                         GTCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGC                     >  SRR4302540.6379299/1‑94 (MQ=60)
                                                                          TCTCGACGATTTCCGCGGTTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCT                    <  SRR4302540.6040789/94‑1 (MQ=60)
                                                                          TCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCCGAGCT                    >  SRR4302540.7693387/1‑94 (MQ=60)
                                                                          TCTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCT                    <  SRR4302540.760148/94‑1 (MQ=60)
                                                                           CTCGACGATTTCCGCGGTTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTC                   >  SRR4302540.8082975/1‑94 (MQ=60)
                                                                           CTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTC                   >  SRR4302540.4104001/1‑94 (MQ=60)
                                                                           CTCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTC                   >  SRR4302540.9211919/1‑94 (MQ=60)
                                                                            TCGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCC                  <  SRR4302540.9864117/94‑1 (MQ=60)
                                                                             CGACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACAAGAGCTCCA                 >  SRR4302540.4626725/1‑94 (MQ=60)
                                                                              GACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAA                >  SRR4302540.6182439/1‑94 (MQ=60)
                                                                              GACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAA                >  SRR4302540.819881/1‑94 (MQ=60)
                                                                              GACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAA                >  SRR4302540.5492199/1‑94 (MQ=60)
                                                                              GACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAA                >  SRR4302540.7564944/1‑94 (MQ=60)
                                                                               ACGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAAT               <  SRR4302540.6147412/94‑1 (MQ=60)
                                                                                CGATTTCCGCGGTTGCTTGATCGATCAGACGATGATCAAACGCTGTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAATT              <  SRR4302540.6865024/94‑1 (MQ=60)
                                                                                CGATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAATT              <  SRR4302540.4507169/94‑1 (MQ=60)
                                                                                 GATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAATTA             >  SRR4302540.6825556/1‑94 (MQ=60)
                                                                                 GATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAATTA             <  SRR4302540.6017244/94‑1 (MQ=60)
                                                                                 GATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAATTA             >  SRR4302540.8112826/1‑94 (MQ=60)
                                                                                 GATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAATTA             <  SRR4302540.8128709/94‑1 (MQ=60)
                                                                                  ATTTCCGCGGTTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCAAATTAT            <  SRR4302540.7845612/94‑1 (MQ=60)
                                                                                  ATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAGCGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGTCCAGAGCTCCAATTAT            <  SRR4302540.4124552/94‑1 (MQ=60)
                                                                                  ATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAATTAT            >  SRR4302540.3380970/1‑94 (MQ=60)
                                                                                  ATTTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAATTAT            >  SRR4302540.5309807/1‑94 (MQ=60)
                                                                                    TTCCGCGGTTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAATTATTT          <  SRR4302540.6243958/94‑1 (MQ=60)
                                                                                    TTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAATTATTT          >  SRR4302540.8339390/1‑94 (MQ=60)
                                                                                    TTCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAATTATTT          >  SRR4302540.2457464/1‑94 (MQ=60)
                                                                                     TCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCCGAGCTCCAATTATTTT         >  SRR4302540.3454498/1‑94 (MQ=60)
                                                                                     TCCGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAATTATTTT         <  SRR4302540.2970225/94‑1 (MQ=60)
                                                                                       CGCGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAATTATTTTAT       <  SRR4302540.1843829/94‑1 (MQ=60)
                                                                                         CGGTTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAATTATTTTATAA     <  SRR4302540.4749687/94‑1 (MQ=60)
                                                                                         CGGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAATTATTTTATAA     >  SRR4302540.9131722/1‑94 (MQ=60)
                                                                                          GGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAATTATTTTATAAA    >  SRR4302540.2215272/1‑94 (MQ=60)
                                                                                          GGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAATTATTTTATAAA    <  SRR4302540.9300263/94‑1 (MQ=60)
                                                                                          GGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAATTATTTTATAAA    <  SRR4302540.382062/94‑1 (MQ=60)
                                                                                          GGCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAATTATTTTATAAA    >  SRR4302540.6850258/1‑94 (MQ=60)
                                                                                           GCTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAATTATTTTATAAAC   <  SRR4302540.5707851/94‑1 (MQ=60)
                                                                                            TTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAATTATTTTATAAACG  <  SRR4302540.4718266/94‑1 (MQ=60)
                                                                                            CTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAATTATTTTATAAACG  >  SRR4302540.2083519/1‑94 (MQ=60)
                                                                                            CTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAATTATTTTATAAACG  >  SRR4302540.2813587/1‑94 (MQ=60)
                                                                                            CTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAATTATTTTATAAACG  >  SRR4302540.3388884/1‑94 (MQ=60)
                                                                                            |                                                                                             
CAGAACAGTGAAGCGCTCTTTGCGTGTCGGCAGCGGGATCGGACCACGGACCTGCGCACCAGTGCGCTTGGCAGTCTCGACGATTTCCGCGGTTGCTTGATCGATCAGACGATGATCAAACGCTTTCAGGCGGATACGGATTCTTTGGTTCTGCATGAGACCAGAGCTCCAATTATTTTATAAACG  >  NC_000913/3450752‑3450937

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑