Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,456,098 A→G Q41Q (CAA→CAG)  yheG → YheG

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,456,0980AG99.7% 1235.6 / ‑5.0 379Q41Q (CAA→CAG) yheGYheG
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base G (197/181);  total (197/182)
Fisher's exact test for biased strand distribution p-value = 4.80e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.55e-01

Only 100 of 392 total aligned reads displayed.

GGCGCTGGCACAACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAACGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCAGAATACCGG  >  NC_000913/3456008‑3456187
                                                                                          |                                                                                         
ggCGCTGGCACAACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCg                                                                                         >  1:4934936/1‑93 (MQ=255)
   gcTGGCACAGCGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCa                                                                                      <  1:3066735/93‑1 (MQ=255)
   gcTGGCACAACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCa                                                                                      <  2:1441240/93‑1 (MQ=255)
    cTGGCACAACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAg                                                                                     >  2:9425387/1‑93 (MQ=255)
     tGGCACAACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAgg                                                                                    <  1:4266175/93‑1 (MQ=255)
       gCACAACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGtt                                                                                  <  2:935461/93‑1 (MQ=255)
       gCACAACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGtt                                                                                  >  1:2726145/1‑93 (MQ=255)
        cacaACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCCTTCGAGCGGTTACTCGATATTCAGCCTCAGGTTg                                                                                 >  2:9221668/1‑93 (MQ=255)
        cacaACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTg                                                                                 <  1:2168596/93‑1 (MQ=255)
         acaACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTgg                                                                                >  2:6223849/1‑93 (MQ=255)
         acaACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTgg                                                                                >  1:3236044/1‑93 (MQ=255)
            aCGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCa                                                                             >  2:4309996/1‑93 (MQ=255)
            aCGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCa                                                                             <  1:4533923/93‑1 (MQ=255)
            aCGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCa                                                                             <  2:293206/93‑1 (MQ=255)
            aCGAATTGGTTATCTATATTGAGAGGGAGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCa                                                                             <  1:1722118/93‑1 (MQ=255)
              gAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGt                                                                           >  1:8632133/1‑93 (MQ=255)
                aTTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGc                                                                         >  1:5091877/1‑93 (MQ=255)
                 ttGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTggc                                                                        >  1:6408158/1‑91 (MQ=255)
                 ttGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGcc                                                                        >  1:33595/1‑93 (MQ=255)
                  tGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCa                                                                       <  1:260644/93‑1 (MQ=255)
                    gTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGa                                                                     >  1:9710021/1‑93 (MQ=255)
                    gTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGa                                                                     >  1:3783057/1‑93 (MQ=255)
                       aTCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCa                                                                  <  2:1100191/93‑1 (MQ=255)
                        tctcTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCAt                                                                 <  1:4221287/93‑1 (MQ=255)
                         ctctATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATg                                                                <  2:8957774/93‑1 (MQ=255)
                          tctATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGa                                                               >  2:4184233/1‑93 (MQ=255)
                          tctATTCAGAGGGCGACATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGa                                                               <  2:8305163/93‑1 (MQ=255)
                            tATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGAcc                                                             <  2:8873882/93‑1 (MQ=255)
                            tATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGAcc                                                             >  1:734355/1‑93 (MQ=255)
                            tATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGAcc                                                             <  1:5959058/93‑1 (MQ=255)
                             aTTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCa                                                            >  2:2454550/1‑93 (MQ=255)
                             aTTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCa                                                            >  1:9549838/1‑93 (MQ=255)
                             aTTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCa                                                            <  1:2073005/93‑1 (MQ=255)
                              ttCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAg                                                           <  2:4624906/93‑1 (MQ=255)
                               tCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGc                                                          >  1:15029/1‑93 (MQ=255)
                               tCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGc                                                          >  2:7153925/1‑93 (MQ=255)
                               tCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGc                                                          >  1:6583660/1‑93 (MQ=255)
                               tCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGc                                                          <  1:8478828/93‑1 (MQ=255)
                                cAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCt                                                         >  2:5241320/1‑93 (MQ=255)
                                 agagGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCtt                                                        >  2:7454086/1‑93 (MQ=255)
                                      gCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTcac                                                   >  2:3496577/1‑93 (MQ=255)
                                       cGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTcaca                                                  >  1:2317118/1‑93 (MQ=255)
                                       cGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTcaca                                                  <  1:10025896/93‑1 (MQ=255)
                                        gagaTTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAg                                                 <  1:8179086/93‑1 (MQ=255)
                                        gagaTTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAg                                                 >  1:1907619/1‑93 (MQ=255)
                                         agaTTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAgg                                                >  1:9192926/1‑93 (MQ=255)
                                          gaTTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGc                                               >  2:5588139/1‑93 (MQ=255)
                                          gaTTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGc                                               <  1:9933518/93‑1 (MQ=255)
                                           attattTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCt                                              >  2:8648654/1‑93 (MQ=255)
                                           attattTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCt                                              >  2:9810907/1‑93 (MQ=255)
                                            ttatttatCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTg                                             >  2:6004842/1‑93 (MQ=255)
                                            ttatttatCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTg                                             >  2:3990696/1‑93 (MQ=255)
                                             tatttatCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGa                                            >  2:1639159/1‑93 (MQ=255)
                                              atttatCTCGCGGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGAt                                           <  2:6769/93‑1 (MQ=255)
                                              atttatCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGAt                                           >  1:9850572/1‑93 (MQ=255)
                                               tttatCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGAtt                                          <  2:2549766/93‑1 (MQ=255)
                                                ttatCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGAttt                                         >  1:5661807/1‑93 (MQ=255)
                                                 tatCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGAtttt                                        >  1:1096950/1‑93 (MQ=255)
                                                   tctcGCCGATACGCCATTCTAGCTGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGa                                      <  1:7019156/93‑1 (MQ=255)
                                                   tctcGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGa                                      >  1:4072624/1‑93 (MQ=255)
                                                   tatcGCCGATACGCCATTCAAGCGGTTACGCGATATTCAGCGGCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGa                                      <  2:8122175/91‑1 (MQ=255)
                                                      cGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGc                                   <  1:1256847/93‑1 (MQ=255)
                                                       gCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCATGTCACAGGCTGATTTTGAAGCt                                  >  2:7247786/1‑93 (MQ=255)
                                                        ccGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTc                                 <  2:3704747/93‑1 (MQ=255)
                                                        ccGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGCTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTc                                 <  1:4420851/93‑1 (MQ=255)
                                                         cGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCg                                <  2:2427386/93‑1 (MQ=255)
                                                         cGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCg                                <  1:5149932/93‑1 (MQ=255)
                                                          gATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCgg                               >  1:3958150/1‑93 (MQ=255)
                                                          gATACGCCATTCGAGCGGTTACTCGATATTCAGCGGCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCgg                               >  1:1849210/1‑93 (MQ=255)
                                                           aTACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGc                              <  1:6327370/93‑1 (MQ=255)
                                                            tACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCt                             >  1:7465132/1‑93 (MQ=255)
                                                             aCGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTg                            >  1:5529361/1‑93 (MQ=255)
                                                              cGCCATTCGCGCGGTTACTCGATATTCAGCGTCATGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTgg                           <  1:1206540/93‑1 (MQ=255)
                                                               gCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGa                          >  2:5016661/1‑93 (MQ=255)
                                                               gCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTATCACAGGCTGATTTTGAAGCTTGGCTGGa                          <  2:2985108/93‑1 (MQ=255)
                                                                  aTTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGc                       >  1:7779639/1‑93 (MQ=255)
                                                                   ttCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCg                      >  2:1920915/1‑93 (MQ=255)
                                                                   ttCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCg                      >  2:6937762/1‑93 (MQ=255)
                                                                    tCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCgg                     <  2:4812230/93‑1 (MQ=255)
                                                                    tCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCgg                     >  2:7798727/1‑93 (MQ=255)
                                                                      gAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTa                   <  2:9565867/93‑1 (MQ=255)
                                                                      gAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTa                   <  1:8590260/93‑1 (MQ=255)
                                                                       aGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTAt                  <  1:3478387/93‑1 (MQ=255)
                                                                       aGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTAt                  <  2:3390237/93‑1 (MQ=255)
                                                                        gCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTAtt                 >  2:7590780/1‑93 (MQ=255)
                                                                        gCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTAtt                 <  2:5091854/93‑1 (MQ=255)
                                                                        gCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGGAtt                 >  2:2217654/1‑93 (MQ=255)
                                                                         cGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTc                <  1:7957864/93‑1 (MQ=255)
                                                                         cGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTc                <  2:3548554/93‑1 (MQ=255)
                                                                          ggTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTcc               >  1:2957158/1‑93 (MQ=255)
                                                                            ttACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCAt             >  1:4757835/1‑93 (MQ=255)
                                                                            ttACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCAt             >  2:785464/1‑93 (MQ=255)
                                                                              aCTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCa           >  1:8868020/1‑93 (MQ=255)
                                                                              aCTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCa           <  2:8468751/93‑1 (MQ=255)
                                                                                 cGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCAGaa        <  1:4636259/93‑1 (MQ=255)
                                                                                  gATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCAGAAt       >  1:2488637/1‑93 (MQ=255)
                                                                                    tatTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCAGAATAc     >  2:6560356/1‑93 (MQ=255)
                                                                                      ttCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCAGAATACCg   >  2:1831328/1‑93 (MQ=255)
                                                                                      ttCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCAGAATACCg   >  2:3094049/1‑93 (MQ=255)
                                                                                       tCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCAGAATACCgg  >  1:9414509/1‑93 (MQ=255)
                                                                                          |                                                                                         
GGCGCTGGCACAACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAACGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCAGAATACCGG  >  NC_000913/3456008‑3456187

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 214 total aligned reads displayed.
TTGGGCGCTGGCACAACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAACGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCAGAATACCGGTG  >  NC_000913/3456005‑3456189
                                                                                             |                                                                                           
TTGGGCGCTGGCACAACGAATTGGTTATCTCTATTCAGAGTGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAG                                                                                             >  SRR4302540.1757751/1‑94 (MQ=60)
TTGGGCGCTGGCACAACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAG                                                                                             <  SRR4302540.521148/94‑1 (MQ=60)
 TGGGCGCTGGCACAACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGC                                                                                            <  SRR4302540.7331829/94‑1 (MQ=60)
  GGGCGCTGGCACAACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCG                                                                                           >  SRR4302540.4988163/1‑94 (MQ=60)
     CGCTGGCACAACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCA                                                                                        >  SRR4302540.3140044/1‑94 (MQ=60)
     CGCTGGCACAACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCA                                                                                        <  SRR4302540.8003082/94‑1 (MQ=60)
      GCTGGCACAGCGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAG                                                                                       <  SRR4302540.3100381/94‑1 (MQ=60)
      GCTGGCACAACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATCCGCCACTCGAGCGGTTACTCGATATTCAGCGTCAG                                                                                       <  SRR4302540.1470248/94‑1 (MQ=60)
      GCTGGCACAACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAG                                                                                       <  SRR4302540.10018141/94‑1 (MQ=60)
       CTGGCACAACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGG                                                                                      >  SRR4302540.2445086/1‑94 (MQ=60)
        TGGCACAACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGT                                                                                     <  SRR4302540.4312573/94‑1 (MQ=60)
        TGGCACAACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGT                                                                                     <  SRR4302540.4832100/94‑1 (MQ=60)
         GGCACAACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTT                                                                                    <  SRR4302540.8675119/94‑1 (MQ=60)
         GGCACAACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTT                                                                                    <  SRR4302540.4603783/94‑1 (MQ=60)
         GGCACAACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTT                                                                                    >  SRR4302540.2755550/1‑94 (MQ=60)
          GCACAACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTG                                                                                   <  SRR4302540.4243401/94‑1 (MQ=60)
          GCACAACGAATTGGTTATCTCTACTGAGAGGGCGAGATTATTTATCTCGCCGATACGCCAGTCGAGCGGTTACTCGATATTCAGCGTCAGGTTG                                                                                   <  SRR4302540.4927227/94‑1 (MQ=60)
          GCACAAAGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTAGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTG                                                                                   <  SRR4302540.4080184/94‑1 (MQ=60)
           CACAACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGG                                                                                  <  SRR4302540.2191980/94‑1 (MQ=60)
           CACAACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGG                                                                                  >  SRR4302540.3271240/1‑94 (MQ=60)
            ACAACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGC                                                                                 >  SRR4302540.9630812/1‑94 (MQ=60)
            ACAACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGC                                                                                 >  SRR4302540.9763975/1‑94 (MQ=60)
             CAACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCC                                                                                >  SRR4302540.8088257/1‑94 (MQ=60)
              AACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCA                                                                               <  SRR4302540.5415829/94‑1 (MQ=60)
              AACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCA                                                                               <  SRR4302540.4753560/94‑1 (MQ=60)
              AACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCA                                                                               >  SRR4302540.2308423/1‑94 (MQ=60)
               ACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAG                                                                              <  SRR4302540.4582995/94‑1 (MQ=60)
               ACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAG                                                                              <  SRR4302540.3041236/94‑1 (MQ=60)
               ACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAG                                                                              >  SRR4302540.3298961/1‑94 (MQ=60)
               ACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAG                                                                              <  SRR4302540.2531604/94‑1 (MQ=60)
               ACGAATTGGTTATCTCTATTCAGAGGGCGAAATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAG                                                                              <  SRR4302540.3279156/94‑1 (MQ=60)
               ACGAATTGGTTATCTATATTGAGAGGGAGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAG                                                                              <  SRR4302540.1740701/94‑1 (MQ=60)
                CGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGT                                                                             >  SRR4302540.1502394/1‑94 (MQ=60)
                CGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGT                                                                             >  SRR4302540.8732402/1‑94 (MQ=60)
                CGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGG                                                                             >  SRR4302540.4092577/1‑94 (MQ=60)
                 GAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTG                                                                            >  SRR4302540.3465610/1‑94 (MQ=60)
                  AATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGC                                                                           >  SRR4302540.8930203/1‑94 (MQ=60)
                  AATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGC                                                                           <  SRR4302540.4912493/94‑1 (MQ=60)
                  AATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGC                                                                           >  SRR4302540.5146961/1‑94 (MQ=60)
                   ATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGGC                                                                          >  SRR4302540.6479479/1‑94 (MQ=60)
                   ATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCC                                                                          >  SRR4302540.3719282/1‑94 (MQ=60)
                   ATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCC                                                                          >  SRR4302540.33953/1‑94 (MQ=60)
                     TGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAG                                                                        <  SRR4302540.263185/94‑1 (MQ=60)
                     TGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAG                                                                        <  SRR4302540.429279/94‑1 (MQ=60)
                     TGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAG                                                                        >  SRR4302540.8702918/1‑94 (MQ=60)
                     TGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAG                                                                        >  SRR4302540.8702919/1‑94 (MQ=60)
                     TGGTTAGCTGTATTCAGAGGGGGAGATGATTTATCTCGCCGATACGCCAGTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAG                                                                        <  SRR4302540.429280/94‑1 (MQ=60)
                      GGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGA                                                                       >  SRR4302540.3824316/1‑94 (MQ=60)
                      GGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGA                                                                       >  SRR4302540.9824142/1‑94 (MQ=60)
                       GTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGAC                                                                      >  SRR4302540.7469200/1‑94 (MQ=60)
                       GTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGAC                                                                      <  SRR4302540.9392425/94‑1 (MQ=60)
                        TTATCTCTATTCAGAGGGAGATATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACC                                                                     <  SRR4302540.3491030/94‑1 (MQ=60)
                          ATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCAT                                                                   >  SRR4302540.7573484/1‑94 (MQ=60)
                          ATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCAT                                                                   <  SRR4302540.3906091/94‑1 (MQ=60)
                          ATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCAT                                                                   <  SRR4302540.124321/94‑1 (MQ=60)
                          ATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCAT                                                                   >  SRR4302540.5661502/1‑94 (MQ=60)
                           TCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATA                                                                  >  SRR4302540.2634874/1‑94 (MQ=60)
                            CTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCCGTGCCAGACCATGA                                                                 >  SRR4302540.7752033/1‑94 (MQ=60)
                            CTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGC                                                                 >  SRR4302540.1612236/1‑94 (MQ=60)
                            CTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGA                                                                 >  SRR4302540.5933847/1‑94 (MQ=60)
                             TCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGAC                                                                >  SRR4302540.1105228/1‑94 (MQ=60)
                             TCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGAC                                                                <  SRR4302540.9004314/94‑1 (MQ=60)
                              CTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACC                                                               <  SRR4302540.4392813/94‑1 (MQ=60)
                              CTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACC                                                               >  SRR4302540.742207/1‑94 (MQ=60)
                              CTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACC                                                               >  SRR4302540.1049415/1‑94 (MQ=60)
                              CTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACC                                                               <  SRR4302540.4392812/94‑1 (MQ=60)
                              CTATTCAGAGGGCGAGATTATTTATCTCGCCGAGACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACC                                                               <  SRR4302540.9786312/94‑1 (MQ=60)
                               TATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCA                                                              >  SRR4302540.9662802/1‑94 (MQ=60)
                               TATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGACAGACCATGACCA                                                              >  SRR4302540.9551406/1‑94 (MQ=60)
                                ATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAG                                                             <  SRR4302540.2095295/94‑1 (MQ=60)
                                ATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAG                                                             >  SRR4302540.1834021/1‑94 (MQ=60)
                                ATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAG                                                             <  SRR4302540.2095296/94‑1 (MQ=60)
                                ATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAG                                                             >  SRR4302540.8708285/1‑94 (MQ=60)
                                 TTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGC                                                            >  SRR4302540.15200/1‑94 (MQ=60)
                                 TTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGC                                                            >  SRR4302540.6656585/1‑94 (MQ=60)
                                  TCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCCGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCT                                                           >  SRR4302540.8680199/1‑94 (MQ=60)
                                  TCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCT                                                           >  SRR4302540.5041550/1‑94 (MQ=60)
                                  TCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCT                                                           >  SRR4302540.5041549/1‑94 (MQ=60)
                                  TCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCT                                                           <  SRR4302540.8577308/94‑1 (MQ=60)
                                  TCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCT                                                           >  SRR4302540.10065992/1‑94 (MQ=60)
                                  TCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGATGGCCAGTGCCAGCCCATGACCAGCT                                                           >  SRR4302540.5175623/1‑94 (MQ=60)
                                   CAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTT                                                          >  SRR4302540.3599344/1‑94 (MQ=60)
                                   CAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTT                                                          >  SRR4302540.124904/1‑94 (MQ=60)
                                   CAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTT                                                          >  SRR4302540.8959343/1‑94 (MQ=60)
                                    AGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTG                                                         <  SRR4302540.4481438/94‑1 (MQ=60)
                                    AGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTG                                                         >  SRR4302540.5434920/1‑94 (MQ=60)
                                    AGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTG                                                         <  SRR4302540.5414917/94‑1 (MQ=60)
                                    AGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTG                                                         >  SRR4302540.6737427/1‑94 (MQ=60)
                                     GAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGT                                                        >  SRR4302540.5978733/1‑94 (MQ=60)
                                      AGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTC                                                       <  SRR4302540.230843/94‑1 (MQ=60)
                                      AGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTC                                                       <  SRR4302540.6424066/94‑1 (MQ=60)
                                      AGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTC                                                       <  SRR4302540.6424067/94‑1 (MQ=60)
                                      AGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGGTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTC                                                       >  SRR4302540.6572107/1‑94 (MQ=60)
                                         GCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGTTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACA                                                    <  SRR4302540.648887/94‑1 (MQ=60)
                                         GCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACA                                                    >  SRR4302540.2342065/1‑94 (MQ=60)
                                         GCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACA                                                    <  SRR4302540.1854047/94‑1 (MQ=60)
                                         GCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACA                                                    <  SRR4302540.3185966/94‑1 (MQ=60)
                                          CGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAG                                                   >  SRR4302540.1928464/1‑94 (MQ=60)
                                          CGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAG                                                   >  SRR4302540.1668109/1‑94 (MQ=60)
                                          CGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAG                                                   <  SRR4302540.1235955/94‑1 (MQ=60)
                                          CGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAG                                                   <  SRR4302540.10142555/94‑1 (MQ=60)
                                          CGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAG                                                   <  SRR4302540.4145235/94‑1 (MQ=60)
                                           GAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGG                                                  <  SRR4302540.8274088/94‑1 (MQ=60)
                                           GAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGG                                                  <  SRR4302540.448229/94‑1 (MQ=60)
                                           GAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGG                                                  <  SRR4302540.5687775/94‑1 (MQ=60)
                                           GAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGG                                                  >  SRR4302540.9303186/1‑94 (MQ=60)
                                           GAGATTATTTATCTCGCCGATACGCCATTCGAGCGGCTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATTACCAGCTTGTCACAGG                                                  >  SRR4302540.8775854/1‑94 (MQ=60)
                                            AGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGC                                                 >  SRR4302540.2606039/1‑94 (MQ=60)
                                            AGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGC                                                 >  SRR4302540.7305032/1‑94 (MQ=60)
                                             GATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCT                                                <  SRR4302540.10049445/94‑1 (MQ=60)
                                              ATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTG                                               <  SRR4302540.1956687/94‑1 (MQ=60)
                                              ATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTG                                               >  SRR4302540.5906593/1‑94 (MQ=60)
                                              ATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTG                                               <  SRR4302540.785367/94‑1 (MQ=60)
                                               TTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGA                                              >  SRR4302540.6342966/1‑94 (MQ=60)
                                               TTATTTATCTCACCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGA                                              >  SRR4302540.5036807/1‑94 (MQ=60)
                                                TATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACGATGACCAGCTTGTCACAGGCTGAT                                             <  SRR4302540.5149688/94‑1 (MQ=60)
                                                TATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGAT                                             >  SRR4302540.9965707/1‑94 (MQ=60)
                                                TATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGAT                                             >  SRR4302540.9965709/1‑94 (MQ=60)
                                                TATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGAT                                             >  SRR4302540.1815536/1‑94 (MQ=60)
                                                  TTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTT                                           >  SRR4302540.5724152/1‑94 (MQ=60)
                                                  TTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTT                                           <  SRR4302540.2081081/94‑1 (MQ=60)
                                                   tttgcgCGCCGATACGCGATTCGAGCTGTGACGCGATAGTCAGCGTCAGGTTGGCCAGTTGCAGACCATGACCAGCTTGTCACAGGCTGATTTT                                          <  SRR4302540.1894107/88‑1 (MQ=54)
                                                   TTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTT                                          >  SRR4302540.1108241/1‑94 (MQ=60)
                                                   TTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTT                                          <  SRR4302540.2948876/94‑1 (MQ=60)
                                                     ATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGA                                        >  SRR4302540.4116523/1‑94 (MQ=60)
                                                     ATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGA                                        >  SRR4302540.4116524/1‑94 (MQ=60)
                                                     ATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGA                                        >  SRR4302540.2680767/1‑94 (MQ=60)
                                                      TCTCGCCGATACGCCATTCTAGCTGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAA                                       <  SRR4302540.7097115/94‑1 (MQ=60)
                                                       CTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAG                                      >  SRR4302540.7442203/1‑94 (MQ=60)
                                                        TCGCCCATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGC                                     <  SRR4302540.7106067/94‑1 (MQ=60)
                                                         CGCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCT                                    <  SRR4302540.1269730/94‑1 (MQ=60)
                                                          GCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTC                                   <  SRR4302540.6892625/94‑1 (MQ=60)
                                                          GCCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTC                                   <  SRR4302540.8524422/94‑1 (MQ=60)
                                                           CCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCG                                  <  SRR4302540.4735792/94‑1 (MQ=60)
                                                           CCGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGCTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCG                                  <  SRR4302540.4468750/94‑1 (MQ=60)
                                                            CGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGG                                 <  SRR4302540.5205767/94‑1 (MQ=60)
                                                            CGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGG                                 >  SRR4302540.3840885/1‑94 (MQ=60)
                                                            CGATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGG                                 >  SRR4302540.4000849/1‑94 (MQ=60)
                                                            CGATACGCCATTCGAGCGGTTACTCGATATTCAGCGGCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGG                                 >  SRR4302540.1869490/1‑94 (MQ=60)
                                                             GATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGC                                >  SRR4302540.2388020/1‑94 (MQ=60)
                                                             GATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGC                                >  SRR4302540.8769433/1‑94 (MQ=60)
                                                              ATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCT                               >  SRR4302540.7548393/1‑94 (MQ=60)
                                                              ATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCT                               <  SRR4302540.8016437/94‑1 (MQ=60)
                                                              ATACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCT                               <  SRR4302540.6397833/94‑1 (MQ=60)
                                                               TACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTG                              >  SRR4302540.5590261/1‑94 (MQ=60)
                                                               TACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTG                              >  SRR4302540.6318825/1‑94 (MQ=60)
                                                               TACGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTG                              <  SRR4302540.3113232/94‑1 (MQ=60)
                                                                 CGCCATTCGCGCGGTTACTCGATATTCAGCGTCATGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGA                            <  SRR4302540.1218926/94‑1 (MQ=60)
                                                                 CGCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGA                            <  SRR4302540.8174540/94‑1 (MQ=60)
                                                                  GCCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAA                           <  SRR4302540.2892445/94‑1 (MQ=60)
                                                                   CCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCGCAGGCTGATTTTGAAGCTCGGCTGGAAG                          <  SRR4302540.474046/94‑1 (MQ=60)
                                                                   CCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAG                          <  SRR4302540.2003829/94‑1 (MQ=60)
                                                                   CCATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAG                          >  SRR4302540.2098930/1‑94 (MQ=60)
                                                                   CCATTCGAGCGGTTACTCGATATTCAACGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAG                          <  SRR4302540.2119748/94‑1 (MQ=60)
                                                                    CATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGC                         >  SRR4302540.7870579/1‑94 (MQ=60)
                                                                     ATTCGAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCG                        >  SRR4302540.8422825/1‑94 (MQ=60)
                                                                         GAGCGGTTACTCGATATTGAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTAT                    <  SRR4302540.9867526/94‑1 (MQ=60)
                                                                         GAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTAT                    <  SRR4302540.427340/94‑1 (MQ=60)
                                                                         GAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTAT                    >  SRR4302540.9552031/1‑94 (MQ=60)
                                                                         GAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTAT                    <  SRR4302540.8611057/94‑1 (MQ=60)
                                                                         GAGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTAT                    <  SRR4302540.3316514/94‑1 (MQ=60)
                                                                          AGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATT                   <  SRR4302540.3427345/94‑1 (MQ=60)
                                                                          AGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATT                   <  SRR4302540.3516258/94‑1 (MQ=60)
                                                                          AGCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATT                   <  SRR4302540.2633113/94‑1 (MQ=60)
                                                                           GCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTC                  <  SRR4302540.7470771/94‑1 (MQ=60)
                                                                           GCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTC                  >  SRR4302540.9289080/1‑94 (MQ=60)
                                                                           GCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTC                  <  SRR4302540.9908559/94‑1 (MQ=60)
                                                                           GCGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGGATTC                  >  SRR4302540.2244694/1‑94 (MQ=60)
                                                                            CGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCC                 <  SRR4302540.8050620/94‑1 (MQ=60)
                                                                            CGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCC                 >  SRR4302540.2989734/1‑94 (MQ=60)
                                                                            CGGTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCC                 >  SRR4302540.1873572/1‑94 (MQ=60)
                                                                              GTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCAT               >  SRR4302540.4808607/1‑94 (MQ=60)
                                                                              GTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCAT               >  SRR4302540.458562/1‑94 (MQ=60)
                                                                              GTTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCAT               <  SRR4302540.9509667/94‑1 (MQ=60)
                                                                               TTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATC              <  SRR4302540.5669948/94‑1 (MQ=60)
                                                                               TTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATC              >  SRR4302540.4159165/1‑94 (MQ=60)
                                                                               TTACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATC              >  SRR4302540.647046/1‑94 (MQ=60)
                                                                                TACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCA             >  SRR4302540.8970640/1‑94 (MQ=60)
                                                                                TACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCA             <  SRR4302540.2855952/94‑1 (MQ=60)
                                                                                TACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCA             <  SRR4302540.3026019/94‑1 (MQ=60)
                                                                                TACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCA             <  SRR4302540.1160498/94‑1 (MQ=60)
                                                                                 ACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCAG            <  SRR4302540.4468596/94‑1 (MQ=60)
                                                                                 ACTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCAG            <  SRR4302540.4918705/94‑1 (MQ=60)
                                                                                  CTCGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGGATTCCATCAGA           >  SRR4302540.8318564/1‑94 (MQ=60)
                                                                                    CGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCAGAAT         >  SRR4302540.2515441/1‑94 (MQ=60)
                                                                                    CGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCAGAAT         <  SRR4302540.1878582/94‑1 (MQ=60)
                                                                                    CGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCAGAAT         <  SRR4302540.6198613/94‑1 (MQ=60)
                                                                                    CGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCAGAAT         <  SRR4302540.6545469/94‑1 (MQ=60)
                                                                                    CGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCAGCAGAAT         >  SRR4302540.456567/1‑94 (MQ=60)
                                                                                    CGATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTACTCCATCAGAAT         <  SRR4302540.116981/94‑1 (MQ=60)
                                                                                    CCATATTCAGCGTCAGGTTGGCCAGTTCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCAGAAT         <  SRR4302540.116980/94‑1 (MQ=60)
                                                                                      ATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCAGAATAC       >  SRR4302540.9088879/1‑94 (MQ=60)
                                                                                      ATATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCAGAATAC       <  SRR4302540.1591657/94‑1 (MQ=60)
                                                                                        ATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCAGAATACCG     >  SRR4302540.3902654/1‑94 (MQ=60)
                                                                                        ATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCAGAATACCG     >  SRR4302540.9686773/1‑94 (MQ=60)
                                                                                        ATTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCAGAATACCG     <  SRR4302540.8261596/94‑1 (MQ=60)
                                                                                         TTCAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCAGAATACCGG    >  SRR4302540.9526435/1‑94 (MQ=60)
                                                                                           CAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTTTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGGATTCCATCAGAATACCGGTG  >  SRR4302540.736436/1‑94 (MQ=60)
                                                                                           CAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCAGAATACCGGTG  <  SRR4302540.5763377/94‑1 (MQ=60)
                                                                                           CAGCGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCAGAATACCGGTG  <  SRR4302540.7793781/94‑1 (MQ=60)
                                                                                             |                                                                                           
TTGGGCGCTGGCACAACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAACGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCAGAATACCGGTG  >  NC_000913/3456005‑3456189

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑